2024-07-11 17:42:13,004 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 17:42:13,318 Running on GPU
2024-07-11 17:42:26,503 Found 6 citations for tools or databases
2024-07-11 17:42:26,503 Query 1/1: NKRF_GAK6 (length 1356)
2024-07-11 17:42:27,194 Sleeping for 6s. Reason: PENDING
2024-07-11 17:42:33,600 Sleeping for 8s. Reason: RUNNING
2024-07-11 17:42:42,002 Sleeping for 10s. Reason: RUNNING
2024-07-11 17:42:52,407 Sleeping for 7s. Reason: RUNNING
2024-07-11 17:42:59,799 Sleeping for 7s. Reason: RUNNING
2024-07-11 17:43:07,203 Sleeping for 7s. Reason: RUNNING
2024-07-11 17:43:14,618 Sleeping for 10s. Reason: RUNNING
2024-07-11 17:43:25,023 Sleeping for 6s. Reason: RUNNING
2024-07-11 17:43:31,451 Sleeping for 10s. Reason: RUNNING
2024-07-11 17:43:41,871 Sleeping for 7s. Reason: RUNNING
2024-07-11 17:43:49,289 Sleeping for 8s. Reason: RUNNING
2024-07-11 17:43:59,303 Sleeping for 9s. Reason: PENDING
2024-07-11 17:44:08,712 Sleeping for 9s. Reason: RUNNING
2024-07-11 17:44:18,139 Sleeping for 5s. Reason: RUNNING
2024-07-11 17:44:23,564 Sleeping for 10s. Reason: RUNNING
2024-07-11 17:44:33,973 Sleeping for 5s. Reason: RUNNING
2024-07-11 17:44:39,366 Sleeping for 5s. Reason: RUNNING
2024-07-11 17:44:44,772 Sleeping for 9s. Reason: RUNNING
2024-07-11 17:44:54,184 Sleeping for 10s. Reason: RUNNING
2024-07-11 17:45:07,631 Setting max_seq=508, max_extra_seq=2048
2024-07-11 17:49:08,273 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=47.6 pTM=0.267 ipTM=0.161
2024-07-11 17:49:57,158 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=47.3 pTM=0.26 ipTM=0.17 tol=11.8
2024-07-11 17:50:46,159 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=46.9 pTM=0.256 ipTM=0.168 tol=6.78
2024-07-11 17:51:35,230 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=46.8 pTM=0.256 ipTM=0.171 tol=4.66
2024-07-11 17:52:24,343 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=46.6 pTM=0.256 ipTM=0.167 tol=6.71
2024-07-11 17:53:13,484 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=47.4 pTM=0.255 ipTM=0.167 tol=4.93
2024-07-11 17:54:02,609 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=46.9 pTM=0.255 ipTM=0.166 tol=2.37
2024-07-11 17:54:51,737 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=46.8 pTM=0.256 ipTM=0.167 tol=3.32
2024-07-11 17:55:40,874 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=46.8 pTM=0.256 ipTM=0.167 tol=1.97
2024-07-11 17:56:30,012 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=46.9 pTM=0.255 ipTM=0.168 tol=2.16
2024-07-11 17:57:19,136 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=46.8 pTM=0.255 ipTM=0.168 tol=4.11
2024-07-11 17:58:08,259 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=46.5 pTM=0.256 ipTM=0.167 tol=2.91
2024-07-11 17:58:57,368 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=46.9 pTM=0.256 ipTM=0.167 tol=1.7
2024-07-11 17:59:46,486 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=46.6 pTM=0.256 ipTM=0.168 tol=2.54
2024-07-11 18:00:35,631 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=46.7 pTM=0.255 ipTM=0.169 tol=2.62
2024-07-11 18:01:24,755 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=46.7 pTM=0.254 ipTM=0.169 tol=1.73
2024-07-11 18:02:13,913 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=46.8 pTM=0.254 ipTM=0.169 tol=2.56
2024-07-11 18:03:03,042 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=46.9 pTM=0.254 ipTM=0.166 tol=1.52
2024-07-11 18:03:52,177 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=46.3 pTM=0.255 ipTM=0.168 tol=2.25
2024-07-11 18:04:41,308 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=46.4 pTM=0.254 ipTM=0.169 tol=2.29
2024-07-11 18:05:30,447 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=46 pTM=0.255 ipTM=0.169 tol=1.93
2024-07-11 18:06:19,609 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=46.5 pTM=0.254 ipTM=0.167 tol=1.93
2024-07-11 18:07:08,774 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=46.4 pTM=0.254 ipTM=0.168 tol=3.09
2024-07-11 18:07:57,928 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=46.8 pTM=0.254 ipTM=0.17 tol=2.69
2024-07-11 18:08:47,060 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=46 pTM=0.255 ipTM=0.169 tol=2.66
2024-07-11 18:09:36,165 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=46.1 pTM=0.255 ipTM=0.169 tol=3.89
2024-07-11 18:10:25,263 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=46.5 pTM=0.255 ipTM=0.169 tol=3.01
2024-07-11 18:11:14,397 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=46.5 pTM=0.255 ipTM=0.167 tol=2.34
2024-07-11 18:12:03,526 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=46.6 pTM=0.256 ipTM=0.168 tol=1.41
2024-07-11 18:12:52,678 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=46.7 pTM=0.255 ipTM=0.167 tol=1.03
2024-07-11 18:13:41,802 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=46.8 pTM=0.256 ipTM=0.169 tol=1.3
2024-07-11 18:13:41,803 alphafold2_multimer_v3_model_1_seed_000 took 1652.1s (30 recycles)
2024-07-11 18:14:32,050 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=50.9 pTM=0.278 ipTM=0.161
2024-07-11 18:15:21,340 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=51.3 pTM=0.258 ipTM=0.161 tol=10.4
2024-07-11 18:16:10,576 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=52 pTM=0.256 ipTM=0.16 tol=9.05
2024-07-11 18:16:59,839 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=52 pTM=0.255 ipTM=0.159 tol=9.04
2024-07-11 18:17:49,121 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=52.1 pTM=0.254 ipTM=0.157 tol=6.55
2024-07-11 18:18:38,386 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=52.3 pTM=0.254 ipTM=0.158 tol=5.55
2024-07-11 18:19:27,678 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=52.3 pTM=0.253 ipTM=0.157 tol=6.09
2024-07-11 18:20:16,960 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=52.2 pTM=0.254 ipTM=0.158 tol=3.6
2024-07-11 18:21:06,254 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=52.5 pTM=0.255 ipTM=0.156 tol=3.17
2024-07-11 18:21:55,521 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=52.1 pTM=0.254 ipTM=0.158 tol=3.49
2024-07-11 18:22:44,811 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=52.3 pTM=0.255 ipTM=0.157 tol=3.83
2024-07-11 18:23:34,092 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=52.2 pTM=0.254 ipTM=0.157 tol=3.07
2024-07-11 18:24:23,384 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=52.2 pTM=0.253 ipTM=0.157 tol=3.74
2024-07-11 18:25:12,637 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=52.3 pTM=0.254 ipTM=0.156 tol=3.54
2024-07-11 18:26:01,917 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=52.6 pTM=0.254 ipTM=0.156 tol=3.17
2024-07-11 18:26:51,210 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=52.2 pTM=0.253 ipTM=0.156 tol=3.59
2024-07-11 18:27:40,514 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=52.5 pTM=0.253 ipTM=0.156 tol=2.21
2024-07-11 18:28:29,814 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=52.5 pTM=0.254 ipTM=0.155 tol=2.39
2024-07-11 18:29:19,127 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=52.4 pTM=0.253 ipTM=0.156 tol=1.99
2024-07-11 18:30:08,410 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=52.2 pTM=0.256 ipTM=0.156 tol=4.04
2024-07-11 18:30:57,701 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=52.2 pTM=0.254 ipTM=0.157 tol=4.02
2024-07-11 18:31:46,994 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=52.2 pTM=0.255 ipTM=0.157 tol=2.69
2024-07-11 18:32:36,244 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=52.3 pTM=0.255 ipTM=0.157 tol=2.25
2024-07-11 18:33:25,511 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=52.3 pTM=0.255 ipTM=0.157 tol=3.25
2024-07-11 18:34:14,749 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=52.3 pTM=0.254 ipTM=0.158 tol=3.58
2024-07-11 18:35:04,007 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=52.1 pTM=0.255 ipTM=0.158 tol=2.37
2024-07-11 18:35:53,266 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=52.3 pTM=0.256 ipTM=0.159 tol=4.31
2024-07-11 18:36:42,513 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=52.4 pTM=0.256 ipTM=0.159 tol=2.86
2024-07-11 18:37:31,788 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=52.6 pTM=0.254 ipTM=0.158 tol=2.85
2024-07-11 18:38:21,059 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=52.5 pTM=0.255 ipTM=0.155 tol=3.51
2024-07-11 18:39:10,340 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=52.6 pTM=0.256 ipTM=0.155 tol=3.41
2024-07-11 18:39:10,341 alphafold2_multimer_v3_model_2_seed_000 took 1527.4s (30 recycles)
2024-07-11 18:40:00,805 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=47.6 pTM=0.268 ipTM=0.158
2024-07-11 18:40:50,236 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=48.9 pTM=0.261 ipTM=0.158 tol=14.8
2024-07-11 18:41:39,648 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=49.6 pTM=0.262 ipTM=0.165 tol=6.43
2024-07-11 18:42:29,046 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=49.3 pTM=0.259 ipTM=0.161 tol=5.06
2024-07-11 18:43:18,451 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=49.1 pTM=0.259 ipTM=0.161 tol=4.8
2024-07-11 18:44:07,839 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=49.4 pTM=0.259 ipTM=0.162 tol=4.83
2024-07-11 18:44:57,225 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=49.4 pTM=0.26 ipTM=0.161 tol=2.98
2024-07-11 18:45:46,580 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=49.5 pTM=0.259 ipTM=0.161 tol=2.46
2024-07-11 18:46:35,954 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=49.4 pTM=0.261 ipTM=0.16 tol=1.96
2024-07-11 18:47:25,296 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=49.4 pTM=0.262 ipTM=0.163 tol=2.93
2024-07-11 18:48:14,634 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=49.5 pTM=0.262 ipTM=0.16 tol=2.09
2024-07-11 18:49:03,970 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=49.5 pTM=0.262 ipTM=0.161 tol=2.46
2024-07-11 18:49:53,298 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=49.7 pTM=0.263 ipTM=0.161 tol=2.33
2024-07-11 18:50:42,640 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=49.6 pTM=0.263 ipTM=0.159 tol=1.89
2024-07-11 18:51:32,020 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=49.6 pTM=0.263 ipTM=0.16 tol=1.83
2024-07-11 18:52:21,381 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=49.5 pTM=0.261 ipTM=0.159 tol=6.33
2024-07-11 18:53:10,767 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=49.5 pTM=0.263 ipTM=0.159 tol=3.14
2024-07-11 18:54:00,129 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=49.4 pTM=0.262 ipTM=0.158 tol=5.3
2024-07-11 18:54:49,494 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=49.3 pTM=0.263 ipTM=0.159 tol=2.32
2024-07-11 18:55:38,884 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=49.6 pTM=0.262 ipTM=0.158 tol=2.08
2024-07-11 18:56:28,263 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=49.4 pTM=0.261 ipTM=0.159 tol=2.2
2024-07-11 18:57:17,649 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=49.3 pTM=0.263 ipTM=0.164 tol=4.34
2024-07-11 18:58:07,052 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=49.5 pTM=0.262 ipTM=0.162 tol=4
2024-07-11 18:58:56,416 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=49.5 pTM=0.262 ipTM=0.161 tol=2.75
2024-07-11 18:59:45,790 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=49.4 pTM=0.264 ipTM=0.167 tol=3.16
2024-07-11 19:00:35,137 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=49.4 pTM=0.263 ipTM=0.167 tol=1.98
2024-07-11 19:01:24,491 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=49.2 pTM=0.263 ipTM=0.166 tol=2.08
2024-07-11 19:02:13,805 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=49.4 pTM=0.263 ipTM=0.163 tol=2.71
2024-07-11 19:03:03,136 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=49.5 pTM=0.262 ipTM=0.162 tol=2.86
2024-07-11 19:03:52,447 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=49.4 pTM=0.263 ipTM=0.159 tol=1.84
2024-07-11 19:04:41,789 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=49.5 pTM=0.262 ipTM=0.159 tol=1.85
2024-07-11 19:04:41,790 alphafold2_multimer_v3_model_3_seed_000 took 1530.3s (30 recycles)
2024-07-11 19:05:32,300 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=47.6 pTM=0.264 ipTM=0.159
2024-07-11 19:06:21,740 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=47.6 pTM=0.276 ipTM=0.163 tol=11.7
2024-07-11 19:07:11,176 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=47.8 pTM=0.293 ipTM=0.173 tol=7.14
2024-07-11 19:08:00,597 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=47.8 pTM=0.282 ipTM=0.163 tol=5.39
2024-07-11 19:08:50,034 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=48.2 pTM=0.285 ipTM=0.159 tol=4.5
2024-07-11 19:09:39,438 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=48.4 pTM=0.281 ipTM=0.158 tol=5.76
2024-07-11 19:10:28,872 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=48.5 pTM=0.278 ipTM=0.156 tol=3.48
2024-07-11 19:11:18,285 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=48.2 pTM=0.277 ipTM=0.157 tol=3.03
2024-07-11 19:12:07,697 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=48.5 pTM=0.275 ipTM=0.159 tol=3
2024-07-11 19:12:57,107 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=48.4 pTM=0.274 ipTM=0.157 tol=2.55
2024-07-11 19:13:46,548 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=48.4 pTM=0.274 ipTM=0.156 tol=2.6
2024-07-11 19:14:35,961 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=48 pTM=0.277 ipTM=0.156 tol=2.77
2024-07-11 19:15:25,380 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=48.2 pTM=0.277 ipTM=0.157 tol=4.12
2024-07-11 19:16:14,796 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=48.2 pTM=0.277 ipTM=0.158 tol=2.06
2024-07-11 19:17:04,260 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=48.5 pTM=0.278 ipTM=0.156 tol=4.14
2024-07-11 19:17:53,711 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=48.4 pTM=0.274 ipTM=0.157 tol=2.2
2024-07-11 19:18:43,184 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=48.6 pTM=0.276 ipTM=0.156 tol=4.04
2024-07-11 19:19:32,609 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=48.2 pTM=0.277 ipTM=0.157 tol=4.21
2024-07-11 19:20:22,088 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=48.6 pTM=0.277 ipTM=0.157 tol=1.91
2024-07-11 19:21:11,532 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=48 pTM=0.278 ipTM=0.157 tol=2.09
2024-07-11 19:22:00,987 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=47.8 pTM=0.276 ipTM=0.16 tol=2.78
2024-07-11 19:22:50,440 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=47.6 pTM=0.278 ipTM=0.158 tol=3.31
2024-07-11 19:23:39,925 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=48 pTM=0.279 ipTM=0.159 tol=3.05
2024-07-11 19:24:29,372 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=47.9 pTM=0.275 ipTM=0.157 tol=2.43
2024-07-11 19:25:18,791 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=47.8 pTM=0.278 ipTM=0.16 tol=2.43
2024-07-11 19:26:08,215 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=47.4 pTM=0.274 ipTM=0.158 tol=3.89
2024-07-11 19:26:57,679 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=48.4 pTM=0.28 ipTM=0.154 tol=3.05
2024-07-11 19:27:47,101 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=48.5 pTM=0.276 ipTM=0.156 tol=2.85
2024-07-11 19:28:36,549 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=48.7 pTM=0.276 ipTM=0.156 tol=2.34
2024-07-11 19:29:26,006 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=48.5 pTM=0.276 ipTM=0.157 tol=3.24
2024-07-11 19:30:15,467 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=49 pTM=0.276 ipTM=0.158 tol=4.34
2024-07-11 19:30:15,468 alphafold2_multimer_v3_model_4_seed_000 took 1532.6s (30 recycles)
2024-07-11 19:31:05,941 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=47.9 pTM=0.275 ipTM=0.155
2024-07-11 19:31:55,328 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=49.9 pTM=0.258 ipTM=0.157 tol=10.7
2024-07-11 19:32:44,683 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=50.3 pTM=0.257 ipTM=0.158 tol=6.79
2024-07-11 19:33:34,061 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=50.5 pTM=0.253 ipTM=0.153 tol=4.13
2024-07-11 19:34:23,456 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=50.7 pTM=0.255 ipTM=0.154 tol=5.08
2024-07-11 19:35:12,842 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=50.7 pTM=0.255 ipTM=0.153 tol=6.03
2024-07-11 19:36:02,224 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=50.6 pTM=0.256 ipTM=0.155 tol=6.96
2024-07-11 19:36:51,583 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=50.5 pTM=0.255 ipTM=0.154 tol=6.29
2024-07-11 19:37:40,971 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=50.7 pTM=0.257 ipTM=0.155 tol=5.49
2024-07-11 19:38:30,356 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=50.6 pTM=0.259 ipTM=0.156 tol=4.1
2024-07-11 19:39:19,778 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=50.9 pTM=0.258 ipTM=0.155 tol=4.82
2024-07-11 19:40:09,140 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=50.5 pTM=0.258 ipTM=0.156 tol=4.21
2024-07-11 19:40:58,535 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=51 pTM=0.258 ipTM=0.155 tol=4.87
2024-07-11 19:41:47,888 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=50.8 pTM=0.259 ipTM=0.157 tol=5.12
2024-07-11 19:42:37,259 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=50.8 pTM=0.259 ipTM=0.156 tol=4.71
2024-07-11 19:43:26,623 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=50.9 pTM=0.258 ipTM=0.156 tol=3.83
2024-07-11 19:44:15,989 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=50.9 pTM=0.258 ipTM=0.155 tol=3.49
2024-07-11 19:45:05,348 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=50.7 pTM=0.259 ipTM=0.155 tol=4.02
2024-07-11 19:45:54,715 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=50.8 pTM=0.258 ipTM=0.156 tol=2.79
2024-07-11 19:46:44,064 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=50.2 pTM=0.256 ipTM=0.157 tol=4.85
2024-07-11 19:47:33,403 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=50.6 pTM=0.256 ipTM=0.156 tol=2.97
2024-07-11 19:48:22,759 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=50.3 pTM=0.256 ipTM=0.156 tol=4.71
2024-07-11 19:49:12,130 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=50.6 pTM=0.258 ipTM=0.155 tol=4.75
2024-07-11 19:50:01,477 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=50.3 pTM=0.257 ipTM=0.156 tol=5.09
2024-07-11 19:50:50,832 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=50.5 pTM=0.257 ipTM=0.157 tol=4.42
2024-07-11 19:51:40,197 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=50.2 pTM=0.255 ipTM=0.156 tol=2.67
2024-07-11 19:52:29,584 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=50.8 pTM=0.257 ipTM=0.157 tol=2.24
2024-07-11 19:53:18,946 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=50.7 pTM=0.258 ipTM=0.157 tol=2.64
2024-07-11 19:54:08,306 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=50.8 pTM=0.257 ipTM=0.156 tol=2.79
2024-07-11 19:54:57,638 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=50.5 pTM=0.256 ipTM=0.155 tol=3.37
2024-07-11 19:55:47,012 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=50.9 pTM=0.257 ipTM=0.156 tol=2.45
2024-07-11 19:55:47,013 alphafold2_multimer_v3_model_5_seed_000 took 1530.4s (30 recycles)
2024-07-11 19:55:48,120 reranking models by 'multimer' metric
2024-07-11 19:55:49,563 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 19:57:50,485 Relaxation took 122.4s
2024-07-11 19:57:50,485 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=46.8 pTM=0.256 ipTM=0.169
2024-07-11 20:00:12,965 Relaxation took 142.5s
2024-07-11 20:00:12,965 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=49 pTM=0.276 ipTM=0.158
2024-07-11 20:02:48,033 Relaxation took 155.1s
2024-07-11 20:02:48,034 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=49.5 pTM=0.262 ipTM=0.159
2024-07-11 20:04:50,121 Relaxation took 122.1s
2024-07-11 20:04:50,121 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=50.9 pTM=0.257 ipTM=0.156
2024-07-11 20:17:50,729 Relaxation took 780.6s
2024-07-11 20:17:50,729 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=52.6 pTM=0.256 ipTM=0.155
2024-07-11 20:17:57,651 Done