2024-07-11 18:00:09,090 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 18:00:09,468 Running on GPU
2024-07-11 18:00:19,424 Found 6 citations for tools or databases
2024-07-11 18:00:19,424 Query 1/1: NODAL_TP4A3 (length 520)
2024-07-11 18:00:19,962 Sleeping for 5s. Reason: PENDING
2024-07-11 18:00:25,367 Sleeping for 6s. Reason: RUNNING
2024-07-11 18:00:31,817 Sleeping for 7s. Reason: RUNNING
2024-07-11 18:00:39,235 Sleeping for 8s. Reason: RUNNING
2024-07-11 18:00:47,642 Sleeping for 10s. Reason: RUNNING
2024-07-11 18:00:59,077 Sleeping for 6s. Reason: RUNNING
2024-07-11 18:01:05,494 Sleeping for 6s. Reason: RUNNING
2024-07-11 18:01:11,895 Sleeping for 8s. Reason: RUNNING
2024-07-11 18:01:20,366 Sleeping for 6s. Reason: RUNNING
2024-07-11 18:01:26,771 Sleeping for 9s. Reason: RUNNING
2024-07-11 18:01:37,812 Sleeping for 5s. Reason: PENDING
2024-07-11 18:01:43,238 Sleeping for 10s. Reason: RUNNING
2024-07-11 18:01:53,692 Sleeping for 5s. Reason: RUNNING
2024-07-11 18:01:59,096 Sleeping for 9s. Reason: RUNNING
2024-07-11 18:02:08,498 Sleeping for 6s. Reason: RUNNING
2024-07-11 18:02:14,900 Sleeping for 9s. Reason: RUNNING
2024-07-11 18:02:26,346 Setting max_seq=508, max_extra_seq=2048
2024-07-11 18:04:58,432 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=62 pTM=0.379 ipTM=0.205
2024-07-11 18:05:04,062 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=63.4 pTM=0.395 ipTM=0.217 tol=8.07
2024-07-11 18:05:09,697 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66.9 pTM=0.385 ipTM=0.208 tol=8.57
2024-07-11 18:05:15,330 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=66.1 pTM=0.375 ipTM=0.155 tol=5.21
2024-07-11 18:05:20,969 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=67.1 pTM=0.373 ipTM=0.15 tol=2.67
2024-07-11 18:05:26,606 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66.6 pTM=0.375 ipTM=0.153 tol=2.17
2024-07-11 18:05:32,245 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=66.4 pTM=0.37 ipTM=0.157 tol=2.3
2024-07-11 18:05:37,890 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=66.8 pTM=0.369 ipTM=0.152 tol=3.12
2024-07-11 18:05:43,532 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.1 pTM=0.367 ipTM=0.139 tol=3.13
2024-07-11 18:05:49,177 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=66.3 pTM=0.368 ipTM=0.145 tol=2.17
2024-07-11 18:05:54,822 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=66.4 pTM=0.362 ipTM=0.129 tol=2.44
2024-07-11 18:06:00,473 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66.8 pTM=0.369 ipTM=0.147 tol=2.12
2024-07-11 18:06:06,123 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.1 pTM=0.362 ipTM=0.129 tol=1.79
2024-07-11 18:06:11,774 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=66.4 pTM=0.367 ipTM=0.138 tol=2.89
2024-07-11 18:06:17,421 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=66.4 pTM=0.363 ipTM=0.129 tol=2.36
2024-07-11 18:06:23,071 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=66.2 pTM=0.364 ipTM=0.144 tol=1.92
2024-07-11 18:06:28,730 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=67.2 pTM=0.363 ipTM=0.126 tol=2.12
2024-07-11 18:06:34,396 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=67.5 pTM=0.366 ipTM=0.133 tol=1.94
2024-07-11 18:06:40,060 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=67.3 pTM=0.368 ipTM=0.132 tol=1.42
2024-07-11 18:06:45,726 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=67.5 pTM=0.367 ipTM=0.143 tol=2.41
2024-07-11 18:06:51,389 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=67.9 pTM=0.365 ipTM=0.131 tol=1.21
2024-07-11 18:06:57,056 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=67.5 pTM=0.367 ipTM=0.133 tol=1.25
2024-07-11 18:07:02,721 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=67.4 pTM=0.369 ipTM=0.136 tol=1.08
2024-07-11 18:07:08,386 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=68.4 pTM=0.373 ipTM=0.139 tol=1.86
2024-07-11 18:07:14,052 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=67.1 pTM=0.365 ipTM=0.126 tol=2.48
2024-07-11 18:07:19,716 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=67.5 pTM=0.366 ipTM=0.137 tol=2.61
2024-07-11 18:07:25,382 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=67.8 pTM=0.365 ipTM=0.13 tol=1.64
2024-07-11 18:07:31,048 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=67.8 pTM=0.37 ipTM=0.142 tol=1.65
2024-07-11 18:07:36,717 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=67.9 pTM=0.368 ipTM=0.131 tol=3
2024-07-11 18:07:42,383 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=68.9 pTM=0.375 ipTM=0.13 tol=2.81
2024-07-11 18:07:48,053 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=67.4 pTM=0.365 ipTM=0.119 tol=2.27
2024-07-11 18:07:48,053 alphafold2_multimer_v3_model_1_seed_000 took 284.2s (30 recycles)
2024-07-11 18:07:53,903 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=63.5 pTM=0.503 ipTM=0.524
2024-07-11 18:07:59,569 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=67.3 pTM=0.401 ipTM=0.223 tol=8.3
2024-07-11 18:08:05,241 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=67.1 pTM=0.388 ipTM=0.2 tol=3.68
2024-07-11 18:08:10,909 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=68.9 pTM=0.379 ipTM=0.131 tol=4.93
2024-07-11 18:08:16,580 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=70.7 pTM=0.407 ipTM=0.134 tol=6.34
2024-07-11 18:08:22,252 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=72.9 pTM=0.48 ipTM=0.116 tol=5.72
2024-07-11 18:08:27,925 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=73 pTM=0.482 ipTM=0.135 tol=3.34
2024-07-11 18:08:33,607 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=73.9 pTM=0.479 ipTM=0.128 tol=2.1
2024-07-11 18:08:39,287 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=74.2 pTM=0.486 ipTM=0.155 tol=4.31
2024-07-11 18:08:44,964 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=74.1 pTM=0.482 ipTM=0.144 tol=1.66
2024-07-11 18:08:50,643 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=74.5 pTM=0.484 ipTM=0.153 tol=3.97
2024-07-11 18:08:56,325 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=74.6 pTM=0.488 ipTM=0.149 tol=3.45
2024-07-11 18:09:02,012 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=74.6 pTM=0.484 ipTM=0.138 tol=2.3
2024-07-11 18:09:07,696 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=74.5 pTM=0.484 ipTM=0.145 tol=1.38
2024-07-11 18:09:13,382 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=74.4 pTM=0.482 ipTM=0.137 tol=1.28
2024-07-11 18:09:19,066 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=74.4 pTM=0.48 ipTM=0.133 tol=3.07
2024-07-11 18:09:24,752 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=74.5 pTM=0.483 ipTM=0.14 tol=1.98
2024-07-11 18:09:30,442 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=74.4 pTM=0.48 ipTM=0.14 tol=1.95
2024-07-11 18:09:36,136 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=74.6 pTM=0.487 ipTM=0.13 tol=1.64
2024-07-11 18:09:41,820 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=74.2 pTM=0.479 ipTM=0.137 tol=1.88
2024-07-11 18:09:47,503 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=74.4 pTM=0.48 ipTM=0.147 tol=5.65
2024-07-11 18:09:53,186 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=74.3 pTM=0.483 ipTM=0.141 tol=4.03
2024-07-11 18:09:58,872 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=74.1 pTM=0.476 ipTM=0.137 tol=1.33
2024-07-11 18:10:04,565 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=74.4 pTM=0.48 ipTM=0.134 tol=1.54
2024-07-11 18:10:10,252 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=74.4 pTM=0.481 ipTM=0.131 tol=0.84
2024-07-11 18:10:15,939 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=74.4 pTM=0.479 ipTM=0.132 tol=1.04
2024-07-11 18:10:21,630 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=74.4 pTM=0.486 ipTM=0.13 tol=1.43
2024-07-11 18:10:27,318 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=74.6 pTM=0.481 ipTM=0.134 tol=3.56
2024-07-11 18:10:33,003 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=74.3 pTM=0.483 ipTM=0.141 tol=3.07
2024-07-11 18:10:38,689 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=74.4 pTM=0.485 ipTM=0.137 tol=2.23
2024-07-11 18:10:44,373 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=74.2 pTM=0.479 ipTM=0.137 tol=3.59
2024-07-11 18:10:44,374 alphafold2_multimer_v3_model_2_seed_000 took 176.1s (30 recycles)
2024-07-11 18:10:50,211 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=63.9 pTM=0.441 ipTM=0.391
2024-07-11 18:10:55,873 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=67.8 pTM=0.392 ipTM=0.141 tol=10.8
2024-07-11 18:11:01,548 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=70.5 pTM=0.422 ipTM=0.133 tol=13
2024-07-11 18:11:07,225 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=71.5 pTM=0.47 ipTM=0.143 tol=5.02
2024-07-11 18:11:12,906 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=72.1 pTM=0.48 ipTM=0.135 tol=2.6
2024-07-11 18:11:18,583 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=72.4 pTM=0.49 ipTM=0.145 tol=3.42
2024-07-11 18:11:24,268 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=72.8 pTM=0.491 ipTM=0.141 tol=1.65
2024-07-11 18:11:29,943 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=72.6 pTM=0.492 ipTM=0.139 tol=1.84
2024-07-11 18:11:35,624 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=72.8 pTM=0.496 ipTM=0.148 tol=2.39
2024-07-11 18:11:41,293 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=72.6 pTM=0.494 ipTM=0.144 tol=1.63
2024-07-11 18:11:46,964 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=72.6 pTM=0.497 ipTM=0.149 tol=2.39
2024-07-11 18:11:52,640 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=72.9 pTM=0.497 ipTM=0.143 tol=2.12
2024-07-11 18:11:58,316 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=72.6 pTM=0.496 ipTM=0.141 tol=0.898
2024-07-11 18:12:03,992 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=72.4 pTM=0.493 ipTM=0.14 tol=1.15
2024-07-11 18:12:09,670 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=72.7 pTM=0.497 ipTM=0.147 tol=2.63
2024-07-11 18:12:15,347 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=72.8 pTM=0.498 ipTM=0.142 tol=2.3
2024-07-11 18:12:21,027 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=72.8 pTM=0.497 ipTM=0.138 tol=1.25
2024-07-11 18:12:26,703 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=72.6 pTM=0.492 ipTM=0.144 tol=1.21
2024-07-11 18:12:32,381 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=72.9 pTM=0.5 ipTM=0.143 tol=0.968
2024-07-11 18:12:38,058 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=72.2 pTM=0.493 ipTM=0.143 tol=1.05
2024-07-11 18:12:43,736 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=72.3 pTM=0.495 ipTM=0.146 tol=2.14
2024-07-11 18:12:49,414 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=72.2 pTM=0.494 ipTM=0.149 tol=2.95
2024-07-11 18:12:55,090 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=72.3 pTM=0.492 ipTM=0.14 tol=1.97
2024-07-11 18:13:00,770 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=72.6 pTM=0.497 ipTM=0.142 tol=2.16
2024-07-11 18:13:06,450 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=72.4 pTM=0.499 ipTM=0.16 tol=4.14
2024-07-11 18:13:12,131 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=72.6 pTM=0.494 ipTM=0.137 tol=2.8
2024-07-11 18:13:17,810 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=72.6 pTM=0.496 ipTM=0.141 tol=3.7
2024-07-11 18:13:23,485 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=72.4 pTM=0.496 ipTM=0.147 tol=2.07
2024-07-11 18:13:29,155 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=72.2 pTM=0.5 ipTM=0.16 tol=1.59
2024-07-11 18:13:34,824 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=72.6 pTM=0.502 ipTM=0.149 tol=2.85
2024-07-11 18:13:40,498 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=72.1 pTM=0.495 ipTM=0.145 tol=3.87
2024-07-11 18:13:40,498 alphafold2_multimer_v3_model_3_seed_000 took 175.9s (30 recycles)
2024-07-11 18:13:46,336 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=63.8 pTM=0.389 ipTM=0.195
2024-07-11 18:13:51,998 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=64.8 pTM=0.368 ipTM=0.133 tol=3.6
2024-07-11 18:13:57,667 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=66.8 pTM=0.382 ipTM=0.135 tol=4.79
2024-07-11 18:14:03,334 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=68.4 pTM=0.396 ipTM=0.141 tol=4.07
2024-07-11 18:14:09,002 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=69.6 pTM=0.444 ipTM=0.158 tol=4.4
2024-07-11 18:14:14,667 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=70.9 pTM=0.473 ipTM=0.176 tol=5.12
2024-07-11 18:14:20,341 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=71.1 pTM=0.482 ipTM=0.17 tol=1.05
2024-07-11 18:14:26,015 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=71.3 pTM=0.494 ipTM=0.176 tol=1.91
2024-07-11 18:14:31,692 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=71.4 pTM=0.501 ipTM=0.18 tol=4.3
2024-07-11 18:14:37,364 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=71.4 pTM=0.504 ipTM=0.182 tol=2.11
2024-07-11 18:14:43,033 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=71.4 pTM=0.506 ipTM=0.184 tol=2.79
2024-07-11 18:14:48,705 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=71.6 pTM=0.506 ipTM=0.179 tol=0.991
2024-07-11 18:14:54,378 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=71.2 pTM=0.503 ipTM=0.183 tol=1.33
2024-07-11 18:15:00,050 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=71.8 pTM=0.507 ipTM=0.182 tol=1.34
2024-07-11 18:15:05,723 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=71.5 pTM=0.508 ipTM=0.187 tol=1.15
2024-07-11 18:15:11,395 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=71.8 pTM=0.507 ipTM=0.185 tol=1.58
2024-07-11 18:15:17,067 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=71.6 pTM=0.507 ipTM=0.187 tol=1.51
2024-07-11 18:15:22,738 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=71.9 pTM=0.502 ipTM=0.181 tol=0.774
2024-07-11 18:15:28,418 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=71.8 pTM=0.511 ipTM=0.19 tol=1.76
2024-07-11 18:15:34,094 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=71.6 pTM=0.504 ipTM=0.186 tol=0.778
2024-07-11 18:15:39,769 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=71.6 pTM=0.504 ipTM=0.19 tol=1.98
2024-07-11 18:15:45,449 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=71.6 pTM=0.506 ipTM=0.188 tol=1.48
2024-07-11 18:15:51,126 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=71.4 pTM=0.506 ipTM=0.185 tol=1.45
2024-07-11 18:15:56,801 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=71.6 pTM=0.507 ipTM=0.18 tol=1.12
2024-07-11 18:16:02,476 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=71.4 pTM=0.505 ipTM=0.19 tol=0.946
2024-07-11 18:16:08,153 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=71.2 pTM=0.505 ipTM=0.186 tol=4.09
2024-07-11 18:16:13,833 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=71.4 pTM=0.511 ipTM=0.183 tol=1.18
2024-07-11 18:16:19,501 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=71.8 pTM=0.504 ipTM=0.182 tol=4.43
2024-07-11 18:16:25,171 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=71.6 pTM=0.509 ipTM=0.183 tol=1.56
2024-07-11 18:16:30,843 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=71.6 pTM=0.511 ipTM=0.176 tol=2.08
2024-07-11 18:16:36,514 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=71.5 pTM=0.505 ipTM=0.182 tol=2.65
2024-07-11 18:16:36,514 alphafold2_multimer_v3_model_4_seed_000 took 175.8s (30 recycles)
2024-07-11 18:16:42,363 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=62.3 pTM=0.38 ipTM=0.197
2024-07-11 18:16:48,042 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=68.6 pTM=0.386 ipTM=0.17 tol=13.7
2024-07-11 18:16:53,719 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=71.8 pTM=0.493 ipTM=0.16 tol=4.45
2024-07-11 18:16:59,390 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=71.9 pTM=0.499 ipTM=0.186 tol=4.91
2024-07-11 18:17:05,066 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=72.1 pTM=0.493 ipTM=0.161 tol=1.33
2024-07-11 18:17:10,738 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=72.3 pTM=0.502 ipTM=0.198 tol=2.98
2024-07-11 18:17:16,416 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=72.4 pTM=0.496 ipTM=0.164 tol=2.71
2024-07-11 18:17:22,096 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=72.6 pTM=0.507 ipTM=0.216 tol=2.31
2024-07-11 18:17:27,783 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=72.5 pTM=0.501 ipTM=0.172 tol=4.32
2024-07-11 18:17:33,467 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=72.6 pTM=0.503 ipTM=0.189 tol=2.16
2024-07-11 18:17:39,150 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=72.6 pTM=0.5 ipTM=0.172 tol=3.21
2024-07-11 18:17:44,828 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=72.6 pTM=0.505 ipTM=0.196 tol=1.25
2024-07-11 18:17:50,510 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=72.3 pTM=0.496 ipTM=0.164 tol=1.31
2024-07-11 18:17:56,188 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=72.2 pTM=0.5 ipTM=0.195 tol=1.38
2024-07-11 18:18:01,865 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=72.4 pTM=0.496 ipTM=0.17 tol=0.971
2024-07-11 18:18:07,535 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=72.6 pTM=0.508 ipTM=0.207 tol=1.09
2024-07-11 18:18:13,210 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=72.5 pTM=0.5 ipTM=0.16 tol=1.69
2024-07-11 18:18:18,884 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=72.4 pTM=0.505 ipTM=0.2 tol=1.34
2024-07-11 18:18:24,561 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=72.7 pTM=0.502 ipTM=0.159 tol=1.83
2024-07-11 18:18:30,234 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=72.6 pTM=0.505 ipTM=0.199 tol=1.06
2024-07-11 18:18:35,907 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=72.4 pTM=0.497 ipTM=0.172 tol=1.48
2024-07-11 18:18:41,575 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=72.2 pTM=0.506 ipTM=0.212 tol=1.99
2024-07-11 18:18:47,250 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=72.2 pTM=0.497 ipTM=0.175 tol=1.19
2024-07-11 18:18:52,919 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=72.4 pTM=0.505 ipTM=0.209 tol=0.975
2024-07-11 18:18:58,593 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=72.4 pTM=0.497 ipTM=0.172 tol=1.48
2024-07-11 18:19:04,263 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=72.4 pTM=0.503 ipTM=0.2 tol=2.94
2024-07-11 18:19:09,934 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=72.2 pTM=0.497 ipTM=0.168 tol=1.16
2024-07-11 18:19:15,606 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=72.4 pTM=0.503 ipTM=0.204 tol=1.31
2024-07-11 18:19:21,280 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=72.2 pTM=0.499 ipTM=0.176 tol=1.17
2024-07-11 18:19:26,950 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=72.3 pTM=0.502 ipTM=0.192 tol=0.779
2024-07-11 18:19:32,622 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=72.2 pTM=0.495 ipTM=0.166 tol=2.15
2024-07-11 18:19:32,623 alphafold2_multimer_v3_model_5_seed_000 took 175.9s (30 recycles)
2024-07-11 18:19:32,811 reranking models by 'multimer' metric
2024-07-11 18:19:49,652 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 18:20:33,848 Relaxation took 61.0s
2024-07-11 18:20:33,848 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=71.5 pTM=0.505 ipTM=0.182
2024-07-11 18:21:07,817 Relaxation took 34.0s
2024-07-11 18:21:07,817 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=72.2 pTM=0.495 ipTM=0.166
2024-07-11 18:21:49,703 Relaxation took 41.9s
2024-07-11 18:21:49,703 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=72.1 pTM=0.495 ipTM=0.145
2024-07-11 18:22:28,816 Relaxation took 39.1s
2024-07-11 18:22:28,816 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=74.2 pTM=0.479 ipTM=0.137
2024-07-11 18:22:52,209 Relaxation took 23.4s
2024-07-11 18:22:52,209 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=67.4 pTM=0.365 ipTM=0.119
2024-07-11 18:22:53,267 Done