2024-07-11 18:07:31,378 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 18:07:37,945 Running on GPU
2024-07-11 18:07:55,484 Found 6 citations for tools or databases
2024-07-11 18:07:55,484 Query 1/1: NOS1_VA0D2 (length 1784)
2024-07-11 18:07:55,975 Sleeping for 5s. Reason: PENDING
2024-07-11 18:08:01,414 Sleeping for 5s. Reason: RUNNING
2024-07-11 18:08:06,818 Sleeping for 8s. Reason: RUNNING
2024-07-11 18:08:15,236 Sleeping for 10s. Reason: RUNNING
2024-07-11 18:08:25,671 Sleeping for 9s. Reason: RUNNING
2024-07-11 18:08:35,124 Sleeping for 8s. Reason: RUNNING
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2024-07-11 18:09:02,401 Sleeping for 6s. Reason: RUNNING
2024-07-11 18:09:08,809 Sleeping for 5s. Reason: RUNNING
2024-07-11 18:09:14,207 Sleeping for 8s. Reason: RUNNING
2024-07-11 18:09:22,618 Sleeping for 5s. Reason: RUNNING
2024-07-11 18:09:28,042 Sleeping for 6s. Reason: RUNNING
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2024-07-11 18:09:49,326 Sleeping for 9s. Reason: RUNNING
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2024-07-11 18:10:41,006 Sleeping for 5s. Reason: RUNNING
2024-07-11 18:10:46,413 Sleeping for 9s. Reason: RUNNING
2024-07-11 18:10:55,824 Sleeping for 10s. Reason: RUNNING
2024-07-11 18:11:06,271 Sleeping for 8s. Reason: RUNNING
2024-07-11 18:11:14,688 Sleeping for 6s. Reason: RUNNING
2024-07-11 18:11:21,103 Sleeping for 10s. Reason: RUNNING
2024-07-11 18:11:31,517 Sleeping for 7s. Reason: RUNNING
2024-07-11 18:11:42,547 Sleeping for 8s. Reason: PENDING
2024-07-11 18:11:50,962 Sleeping for 6s. Reason: RUNNING
2024-07-11 18:11:57,376 Sleeping for 6s. Reason: RUNNING
2024-07-11 18:12:03,821 Sleeping for 5s. Reason: RUNNING
2024-07-11 18:12:09,220 Sleeping for 5s. Reason: RUNNING
2024-07-11 18:12:14,657 Sleeping for 10s. Reason: RUNNING
2024-07-11 18:12:25,079 Sleeping for 6s. Reason: RUNNING
2024-07-11 18:12:31,514 Sleeping for 7s. Reason: RUNNING
2024-07-11 18:12:38,940 Sleeping for 6s. Reason: RUNNING
2024-07-11 18:12:45,358 Sleeping for 10s. Reason: RUNNING
2024-07-11 18:12:55,781 Sleeping for 8s. Reason: RUNNING
2024-07-11 18:13:04,189 Sleeping for 8s. Reason: RUNNING
2024-07-11 18:13:12,601 Sleeping for 8s. Reason: RUNNING
2024-07-11 18:13:21,005 Sleeping for 9s. Reason: RUNNING
2024-07-11 18:13:30,418 Sleeping for 5s. Reason: RUNNING
2024-07-11 18:13:35,812 Sleeping for 5s. Reason: RUNNING
2024-07-11 18:13:41,239 Sleeping for 10s. Reason: RUNNING
2024-07-11 18:13:51,659 Sleeping for 5s. Reason: RUNNING
2024-07-11 18:13:57,058 Sleeping for 6s. Reason: RUNNING
2024-07-11 18:14:03,466 Sleeping for 9s. Reason: RUNNING
2024-07-11 18:14:12,921 Sleeping for 8s. Reason: RUNNING
2024-07-11 18:14:21,406 Sleeping for 9s. Reason: RUNNING
2024-07-11 18:14:30,827 Sleeping for 10s. Reason: RUNNING
2024-07-11 18:14:41,237 Sleeping for 7s. Reason: RUNNING
2024-07-11 18:14:48,656 Sleeping for 7s. Reason: RUNNING
2024-07-11 18:15:11,654 Setting max_seq=508, max_extra_seq=2048
2024-07-11 18:20:27,216 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=72.8 pTM=0.459 ipTM=0.215
2024-07-11 18:21:49,658 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=74.2 pTM=0.519 ipTM=0.243 tol=10.7
2024-07-11 18:23:12,297 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=73.9 pTM=0.46 ipTM=0.247 tol=4.18
2024-07-11 18:24:34,924 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=74.2 pTM=0.451 ipTM=0.242 tol=4.26
2024-07-11 18:25:57,453 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=75.1 pTM=0.466 ipTM=0.271 tol=3.21
2024-07-11 18:27:19,952 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=74.4 pTM=0.456 ipTM=0.248 tol=1.79
2024-07-11 18:28:42,487 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=74.4 pTM=0.446 ipTM=0.236 tol=1.92
2024-07-11 18:30:05,008 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=74.4 pTM=0.441 ipTM=0.24 tol=1.59
2024-07-11 18:31:27,477 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=74.8 pTM=0.459 ipTM=0.249 tol=1.7
2024-07-11 18:32:50,001 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=74.6 pTM=0.444 ipTM=0.235 tol=4.25
2024-07-11 18:34:12,554 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=74.4 pTM=0.441 ipTM=0.226 tol=3.59
2024-07-11 18:35:35,103 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=74.3 pTM=0.44 ipTM=0.226 tol=3.58
2024-07-11 18:36:57,653 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=74.4 pTM=0.443 ipTM=0.236 tol=3.83
2024-07-11 18:38:20,199 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=74.4 pTM=0.442 ipTM=0.228 tol=1.39
2024-07-11 18:39:42,769 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=74.4 pTM=0.438 ipTM=0.222 tol=2.37
2024-07-11 18:41:05,278 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=74.6 pTM=0.442 ipTM=0.24 tol=2.22
2024-07-11 18:42:27,820 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=74.4 pTM=0.439 ipTM=0.226 tol=0.843
2024-07-11 18:43:50,369 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=74.2 pTM=0.437 ipTM=0.228 tol=0.968
2024-07-11 18:45:12,888 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=74.6 pTM=0.443 ipTM=0.236 tol=1
2024-07-11 18:46:35,457 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=74.3 pTM=0.438 ipTM=0.229 tol=5.27
2024-07-11 18:47:58,000 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=74.2 pTM=0.438 ipTM=0.226 tol=4
2024-07-11 18:49:20,474 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=75.1 pTM=0.458 ipTM=0.264 tol=2.86
2024-07-11 18:50:43,031 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=74.8 pTM=0.445 ipTM=0.223 tol=2.01
2024-07-11 18:52:05,591 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=74.4 pTM=0.439 ipTM=0.23 tol=1.98
2024-07-11 18:53:28,085 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=74.8 pTM=0.446 ipTM=0.246 tol=1.52
2024-07-11 18:54:50,649 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=73.8 pTM=0.442 ipTM=0.232 tol=8.95
2024-07-11 18:56:13,176 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=74.4 pTM=0.439 ipTM=0.226 tol=7.41
2024-07-11 18:57:35,735 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=74.5 pTM=0.439 ipTM=0.231 tol=2.7
2024-07-11 18:58:58,228 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=74.8 pTM=0.447 ipTM=0.242 tol=1.29
2024-07-11 19:00:20,774 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=74.2 pTM=0.439 ipTM=0.231 tol=1.72
2024-07-11 19:01:43,321 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=74.3 pTM=0.439 ipTM=0.234 tol=1.22
2024-07-11 19:01:43,323 alphafold2_multimer_v3_model_1_seed_000 took 2723.6s (30 recycles)
2024-07-11 19:03:08,780 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=72.1 pTM=0.43 ipTM=0.214
2024-07-11 19:04:31,563 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=74.3 pTM=0.514 ipTM=0.223 tol=9.02
2024-07-11 19:05:54,233 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=74.6 pTM=0.491 ipTM=0.249 tol=7.07
2024-07-11 19:07:16,938 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=74.2 pTM=0.443 ipTM=0.236 tol=2.65
2024-07-11 19:08:39,645 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=74.2 pTM=0.438 ipTM=0.234 tol=2.96
2024-07-11 19:10:02,337 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=74.7 pTM=0.437 ipTM=0.233 tol=2.35
2024-07-11 19:11:25,010 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=74.9 pTM=0.438 ipTM=0.234 tol=1.7
2024-07-11 19:12:47,690 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=75 pTM=0.435 ipTM=0.231 tol=1.58
2024-07-11 19:14:10,389 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=74.9 pTM=0.436 ipTM=0.227 tol=1.25
2024-07-11 19:15:33,102 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=74.9 pTM=0.431 ipTM=0.228 tol=0.991
2024-07-11 19:16:55,785 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=75 pTM=0.435 ipTM=0.229 tol=0.793
2024-07-11 19:18:18,492 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=75 pTM=0.433 ipTM=0.223 tol=0.831
2024-07-11 19:19:41,194 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=74.9 pTM=0.437 ipTM=0.224 tol=0.804
2024-07-11 19:21:03,884 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=75 pTM=0.438 ipTM=0.225 tol=0.861
2024-07-11 19:22:26,587 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=75 pTM=0.433 ipTM=0.227 tol=1.43
2024-07-11 19:23:49,323 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=75.1 pTM=0.434 ipTM=0.229 tol=1.59
2024-07-11 19:25:12,057 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=75.1 pTM=0.433 ipTM=0.227 tol=1.54
2024-07-11 19:26:34,754 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=75.1 pTM=0.437 ipTM=0.229 tol=1.51
2024-07-11 19:27:57,475 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=75.1 pTM=0.435 ipTM=0.23 tol=1.43
2024-07-11 19:29:20,222 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=75 pTM=0.431 ipTM=0.225 tol=1.38
2024-07-11 19:30:42,947 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=75.1 pTM=0.435 ipTM=0.228 tol=1.17
2024-07-11 19:32:05,642 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=75.1 pTM=0.436 ipTM=0.228 tol=1.15
2024-07-11 19:33:28,356 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=75.1 pTM=0.435 ipTM=0.225 tol=1.38
2024-07-11 19:34:51,075 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=75.2 pTM=0.437 ipTM=0.225 tol=1.56
2024-07-11 19:36:13,828 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=75.1 pTM=0.433 ipTM=0.226 tol=1.89
2024-07-11 19:37:36,594 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=75.1 pTM=0.433 ipTM=0.223 tol=1.49
2024-07-11 19:38:59,321 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=75.1 pTM=0.435 ipTM=0.227 tol=1.55
2024-07-11 19:40:22,037 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=75.1 pTM=0.435 ipTM=0.227 tol=1.45
2024-07-11 19:41:44,741 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=74.9 pTM=0.432 ipTM=0.226 tol=1.28
2024-07-11 19:43:07,477 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=75.1 pTM=0.432 ipTM=0.229 tol=1.7
2024-07-11 19:44:30,187 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=75.1 pTM=0.435 ipTM=0.229 tol=1.96
2024-07-11 19:44:30,189 alphafold2_multimer_v3_model_2_seed_000 took 2564.2s (30 recycles)
2024-07-11 19:45:55,706 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=72.7 pTM=0.437 ipTM=0.218
2024-07-11 19:47:18,400 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=73.6 pTM=0.51 ipTM=0.201 tol=15.3
2024-07-11 19:48:41,003 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=74.4 pTM=0.508 ipTM=0.223 tol=9.14
2024-07-11 19:50:03,604 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=74.5 pTM=0.477 ipTM=0.224 tol=3.54
2024-07-11 19:51:26,163 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=74.5 pTM=0.456 ipTM=0.221 tol=2.56
2024-07-11 19:52:48,723 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=74.4 pTM=0.454 ipTM=0.22 tol=2.67
2024-07-11 19:54:11,267 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=74.4 pTM=0.453 ipTM=0.219 tol=5.58
2024-07-11 19:55:33,810 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=74.1 pTM=0.447 ipTM=0.216 tol=1.39
2024-07-11 19:56:56,336 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=74.2 pTM=0.447 ipTM=0.557 tol=17.3
2024-07-11 19:58:18,855 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=74.2 pTM=0.449 ipTM=0.367 tol=6.02
2024-07-11 19:59:41,411 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=74.6 pTM=0.455 ipTM=0.366 tol=3
2024-07-11 20:01:03,947 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=74.4 pTM=0.45 ipTM=0.311 tol=2.12
2024-07-11 20:02:26,504 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=74.5 pTM=0.454 ipTM=0.281 tol=1.71
2024-07-11 20:03:49,070 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=74.4 pTM=0.453 ipTM=0.272 tol=1.87
2024-07-11 20:05:11,646 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=74.6 pTM=0.452 ipTM=0.29 tol=2.02
2024-07-11 20:06:34,217 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=74.4 pTM=0.449 ipTM=0.252 tol=1.65
2024-07-11 20:07:56,743 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=74.7 pTM=0.45 ipTM=0.25 tol=1.29
2024-07-11 20:09:19,242 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=74.6 pTM=0.45 ipTM=0.28 tol=1.13
2024-07-11 20:10:41,738 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=74.7 pTM=0.452 ipTM=0.308 tol=1.91
2024-07-11 20:12:04,234 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=74.9 pTM=0.449 ipTM=0.255 tol=1.42
2024-07-11 20:13:26,771 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=74.9 pTM=0.45 ipTM=0.25 tol=1
2024-07-11 20:14:49,271 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=74.9 pTM=0.451 ipTM=0.235 tol=1.37
2024-07-11 20:16:11,787 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=75 pTM=0.454 ipTM=0.227 tol=4.28
2024-07-11 20:17:34,315 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=75.1 pTM=0.452 ipTM=0.227 tol=3.9
2024-07-11 20:18:56,830 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=75 pTM=0.454 ipTM=0.226 tol=1.58
2024-07-11 20:20:19,347 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=75.2 pTM=0.454 ipTM=0.237 tol=1.53
2024-07-11 20:21:41,876 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=74.9 pTM=0.456 ipTM=0.224 tol=1.5
2024-07-11 20:23:04,383 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=75.1 pTM=0.453 ipTM=0.227 tol=1.89
2024-07-11 20:24:26,868 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=74.9 pTM=0.45 ipTM=0.224 tol=1.45
2024-07-11 20:25:49,330 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=75 pTM=0.451 ipTM=0.227 tol=1.8
2024-07-11 20:27:11,800 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=74.9 pTM=0.452 ipTM=0.223 tol=1.39
2024-07-11 20:27:11,802 alphafold2_multimer_v3_model_3_seed_000 took 2558.9s (30 recycles)
2024-07-11 20:28:37,013 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=72.4 pTM=0.504 ipTM=0.243
2024-07-11 20:29:59,482 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=74.2 pTM=0.527 ipTM=0.258 tol=8.68
2024-07-11 20:31:21,971 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=73.8 pTM=0.522 ipTM=0.253 tol=6.21
2024-07-11 20:32:44,439 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=73.8 pTM=0.509 ipTM=0.257 tol=4.7
2024-07-11 20:34:06,907 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=73.8 pTM=0.503 ipTM=0.254 tol=4.94
2024-07-11 20:35:29,358 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=73.8 pTM=0.504 ipTM=0.264 tol=2.87
2024-07-11 20:36:51,791 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=73.9 pTM=0.503 ipTM=0.263 tol=2.06
2024-07-11 20:38:14,292 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=73.6 pTM=0.481 ipTM=0.251 tol=3.04
2024-07-11 20:39:36,744 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=73.9 pTM=0.489 ipTM=0.261 tol=2.13
2024-07-11 20:40:59,232 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=73.5 pTM=0.489 ipTM=0.263 tol=17.5
2024-07-11 20:42:21,721 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=73.6 pTM=0.476 ipTM=0.286 tol=4.76
2024-07-11 20:43:44,173 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=74 pTM=0.482 ipTM=0.324 tol=3.49
2024-07-11 20:45:06,411 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=76.2 pTM=0.548 ipTM=0.589 tol=4.44
2024-07-11 20:46:28,684 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=75.6 pTM=0.515 ipTM=0.434 tol=1.91
2024-07-11 20:47:51,105 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=73.9 pTM=0.472 ipTM=0.281 tol=3.01
2024-07-11 20:49:13,509 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=74.1 pTM=0.47 ipTM=0.464 tol=5.54
2024-07-11 20:50:35,971 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=74.2 pTM=0.477 ipTM=0.323 tol=3.87
2024-07-11 20:51:58,447 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=73.8 pTM=0.48 ipTM=0.322 tol=2.63
2024-07-11 20:53:20,964 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=74 pTM=0.485 ipTM=0.269 tol=2.49
2024-07-11 20:54:43,497 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=73.8 pTM=0.468 ipTM=0.325 tol=2.94
2024-07-11 20:56:06,011 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=73.8 pTM=0.487 ipTM=0.26 tol=1.86
2024-07-11 20:57:28,497 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=74 pTM=0.486 ipTM=0.328 tol=2.51
2024-07-11 20:58:51,036 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=73.8 pTM=0.477 ipTM=0.296 tol=1.11
2024-07-11 21:00:13,530 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=74.1 pTM=0.486 ipTM=0.306 tol=3.59
2024-07-11 21:01:35,810 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=75.6 pTM=0.53 ipTM=0.589 tol=5.55
2024-07-11 21:02:58,065 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=75.8 pTM=0.521 ipTM=0.506 tol=2.39
2024-07-11 21:04:20,427 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=74.3 pTM=0.483 ipTM=0.312 tol=3.34
2024-07-11 21:05:42,866 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=74.1 pTM=0.473 ipTM=0.357 tol=1.58
2024-07-11 21:07:05,312 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=73.8 pTM=0.476 ipTM=0.285 tol=2.83
2024-07-11 21:08:27,737 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=74 pTM=0.467 ipTM=0.31 tol=3.02
2024-07-11 21:09:50,120 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=73.7 pTM=0.468 ipTM=0.3 tol=2.29
2024-07-11 21:09:50,122 alphafold2_multimer_v3_model_4_seed_000 took 2555.6s (30 recycles)
2024-07-11 21:11:15,416 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=71.1 pTM=0.457 ipTM=0.224
2024-07-11 21:12:37,997 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=73.9 pTM=0.505 ipTM=0.195 tol=12.3
2024-07-11 21:14:00,607 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=73.9 pTM=0.494 ipTM=0.196 tol=6
2024-07-11 21:15:23,272 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=73.9 pTM=0.463 ipTM=0.188 tol=4.55
2024-07-11 21:16:45,939 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=74.1 pTM=0.47 ipTM=0.183 tol=4.17
2024-07-11 21:18:08,523 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=74.4 pTM=0.493 ipTM=0.188 tol=5.51
2024-07-11 21:19:31,089 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=74.4 pTM=0.484 ipTM=0.186 tol=2.84
2024-07-11 21:20:53,689 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=74.4 pTM=0.472 ipTM=0.183 tol=3.43
2024-07-11 21:22:16,285 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=74.4 pTM=0.478 ipTM=0.184 tol=2.64
2024-07-11 21:23:38,823 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=74.8 pTM=0.481 ipTM=0.187 tol=4.26
2024-07-11 21:25:01,395 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=74.4 pTM=0.463 ipTM=0.182 tol=5.8
2024-07-11 21:26:23,931 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=74.6 pTM=0.484 ipTM=0.184 tol=3.78
2024-07-11 21:27:46,502 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=74.8 pTM=0.491 ipTM=0.183 tol=4.7
2024-07-11 21:29:09,047 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=74.7 pTM=0.497 ipTM=0.183 tol=4.13
2024-07-11 21:30:31,623 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=74.4 pTM=0.463 ipTM=0.187 tol=5.34
2024-07-11 21:31:54,198 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=74.5 pTM=0.469 ipTM=0.184 tol=3.69
2024-07-11 21:33:16,798 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=74.9 pTM=0.491 ipTM=0.184 tol=2.14
2024-07-11 21:34:39,364 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=74.4 pTM=0.461 ipTM=0.187 tol=1.86
2024-07-11 21:36:01,995 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=74.4 pTM=0.465 ipTM=0.189 tol=2.95
2024-07-11 21:37:24,612 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=74.4 pTM=0.461 ipTM=0.187 tol=2.62
2024-07-11 21:38:47,222 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=74.7 pTM=0.488 ipTM=0.185 tol=2.1
2024-07-11 21:40:09,793 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=74.6 pTM=0.476 ipTM=0.186 tol=1.32
2024-07-11 21:41:32,393 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=74.4 pTM=0.473 ipTM=0.185 tol=3.4
2024-07-11 21:42:55,004 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=74.4 pTM=0.464 ipTM=0.183 tol=4
2024-07-11 21:44:17,563 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=74.6 pTM=0.49 ipTM=0.183 tol=2.01
2024-07-11 21:45:40,111 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=74.4 pTM=0.477 ipTM=0.186 tol=2.34
2024-07-11 21:47:02,720 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=74.3 pTM=0.469 ipTM=0.182 tol=2.49
2024-07-11 21:48:25,371 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=74.2 pTM=0.457 ipTM=0.183 tol=2.35
2024-07-11 21:49:47,975 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=74.6 pTM=0.491 ipTM=0.183 tol=3.12
2024-07-11 21:51:10,540 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=74.3 pTM=0.47 ipTM=0.182 tol=2.04
2024-07-11 21:52:33,106 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=74.1 pTM=0.473 ipTM=0.184 tol=2.41
2024-07-11 21:52:33,108 alphafold2_multimer_v3_model_5_seed_000 took 2560.3s (30 recycles)
2024-07-11 21:52:35,784 reranking models by 'multimer' metric
2024-07-11 21:52:55,446 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 21:57:47,545 Relaxation took 311.8s
2024-07-11 21:57:47,545 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=73.7 pTM=0.468 ipTM=0.3
2024-07-11 22:03:21,247 Relaxation took 333.7s
2024-07-11 22:03:21,247 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=74.3 pTM=0.439 ipTM=0.234
2024-07-11 22:09:41,052 Relaxation took 379.8s
2024-07-11 22:09:41,052 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=75.1 pTM=0.435 ipTM=0.229
2024-07-11 22:18:26,232 Relaxation took 525.2s
2024-07-11 22:18:26,233 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=74.9 pTM=0.452 ipTM=0.223
2024-07-11 22:25:53,773 Relaxation took 447.5s
2024-07-11 22:25:53,773 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=74.1 pTM=0.473 ipTM=0.184
2024-07-11 22:25:59,852 Done