2024-07-11 18:07:56,060 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-11 18:07:56,410 Running on GPU 2024-07-11 18:08:07,401 Found 6 citations for tools or databases 2024-07-11 18:08:07,401 Query 1/1: NOX5_RM54 (length 903) 2024-07-11 18:08:07,936 Sleeping for 10s. Reason: PENDING 2024-07-11 18:08:18,341 Sleeping for 10s. Reason: RUNNING 2024-07-11 18:08:28,764 Sleeping for 6s. Reason: RUNNING 2024-07-11 18:08:35,183 Sleeping for 10s. Reason: RUNNING 2024-07-11 18:08:45,589 Sleeping for 9s. Reason: RUNNING 2024-07-11 18:08:55,019 Sleeping for 5s. Reason: RUNNING 2024-07-11 18:09:00,429 Sleeping for 9s. Reason: RUNNING 2024-07-11 18:09:09,867 Sleeping for 10s. Reason: RUNNING 2024-07-11 18:09:20,282 Sleeping for 10s. Reason: RUNNING 2024-07-11 18:09:30,698 Sleeping for 8s. Reason: RUNNING 2024-07-11 18:09:39,105 Sleeping for 9s. Reason: RUNNING 2024-07-11 18:09:50,372 Sleeping for 10s. Reason: PENDING 2024-07-11 18:10:00,800 Sleeping for 10s. Reason: RUNNING 2024-07-11 18:10:11,220 Sleeping for 10s. Reason: RUNNING 2024-07-11 18:10:21,640 Sleeping for 7s. Reason: RUNNING 2024-07-11 18:10:29,054 Sleeping for 7s. Reason: RUNNING 2024-07-11 18:10:36,447 Sleeping for 6s. Reason: RUNNING 2024-07-11 18:10:42,852 Sleeping for 5s. Reason: RUNNING 2024-07-11 18:10:51,435 Setting max_seq=508, max_extra_seq=2048 2024-07-11 18:14:27,977 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=68.6 pTM=0.635 ipTM=0.163 2024-07-11 18:14:45,043 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=69.1 pTM=0.631 ipTM=0.141 tol=8.73 2024-07-11 18:15:02,154 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=69 pTM=0.617 ipTM=0.143 tol=2.65 2024-07-11 18:15:19,311 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=69 pTM=0.614 ipTM=0.145 tol=1.97 2024-07-11 18:15:36,499 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=69.8 pTM=0.618 ipTM=0.145 tol=1.34 2024-07-11 18:15:53,713 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=69.9 pTM=0.622 ipTM=0.142 tol=1.46 2024-07-11 18:16:10,946 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=69.8 pTM=0.62 ipTM=0.142 tol=1.05 2024-07-11 18:16:28,182 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=69.7 pTM=0.622 ipTM=0.143 tol=1.37 2024-07-11 18:16:45,431 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=69.9 pTM=0.62 ipTM=0.15 tol=1.89 2024-07-11 18:17:02,683 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=70 pTM=0.623 ipTM=0.142 tol=2.12 2024-07-11 18:17:19,938 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=70.1 pTM=0.621 ipTM=0.144 tol=1.72 2024-07-11 18:17:37,212 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=69.9 pTM=0.619 ipTM=0.144 tol=1.38 2024-07-11 18:17:54,493 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=69.8 pTM=0.621 ipTM=0.146 tol=1.28 2024-07-11 18:18:11,781 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=69.9 pTM=0.62 ipTM=0.148 tol=1.66 2024-07-11 18:18:29,069 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=70.2 pTM=0.622 ipTM=0.153 tol=2.16 2024-07-11 18:18:46,352 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=70 pTM=0.621 ipTM=0.153 tol=1.67 2024-07-11 18:19:03,638 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=70.2 pTM=0.623 ipTM=0.15 tol=1.53 2024-07-11 18:19:20,929 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=69.9 pTM=0.621 ipTM=0.15 tol=1.08 2024-07-11 18:19:38,220 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=70.1 pTM=0.618 ipTM=0.155 tol=1.26 2024-07-11 18:19:55,511 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=69.8 pTM=0.618 ipTM=0.156 tol=1.31 2024-07-11 18:20:12,796 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=69.9 pTM=0.616 ipTM=0.156 tol=1.95 2024-07-11 18:20:30,096 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=69.9 pTM=0.617 ipTM=0.154 tol=1.46 2024-07-11 18:20:47,398 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=69.9 pTM=0.617 ipTM=0.157 tol=3.21 2024-07-11 18:21:04,698 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=70.1 pTM=0.617 ipTM=0.156 tol=2.42 2024-07-11 18:21:21,999 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=69.9 pTM=0.623 ipTM=0.15 tol=1.53 2024-07-11 18:21:39,303 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=70 pTM=0.621 ipTM=0.155 tol=0.7 2024-07-11 18:21:56,610 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=70 pTM=0.617 ipTM=0.149 tol=0.972 2024-07-11 18:22:13,922 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=70.1 pTM=0.617 ipTM=0.155 tol=1.27 2024-07-11 18:22:31,236 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=69.9 pTM=0.621 ipTM=0.153 tol=1.52 2024-07-11 18:22:48,539 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=69.9 pTM=0.614 ipTM=0.155 tol=1.24 2024-07-11 18:23:05,842 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=70 pTM=0.612 ipTM=0.153 tol=1.36 2024-07-11 18:23:05,843 alphafold2_multimer_v3_model_1_seed_000 took 687.6s (30 recycles) 2024-07-11 18:23:23,664 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=68.9 pTM=0.652 ipTM=0.143 2024-07-11 18:23:40,964 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=70.2 pTM=0.645 ipTM=0.141 tol=6.95 2024-07-11 18:23:58,257 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=69.8 pTM=0.629 ipTM=0.141 tol=2.25 2024-07-11 18:24:15,568 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=70.2 pTM=0.631 ipTM=0.143 tol=2.12 2024-07-11 18:24:32,875 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=70.8 pTM=0.635 ipTM=0.145 tol=1.74 2024-07-11 18:24:50,183 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=71.1 pTM=0.642 ipTM=0.152 tol=1.69 2024-07-11 18:25:07,490 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=71.2 pTM=0.643 ipTM=0.151 tol=0.904 2024-07-11 18:25:24,797 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=71.1 pTM=0.649 ipTM=0.15 tol=0.87 2024-07-11 18:25:42,100 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=71 pTM=0.644 ipTM=0.147 tol=0.846 2024-07-11 18:25:59,402 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=71.6 pTM=0.652 ipTM=0.151 tol=1.31 2024-07-11 18:26:16,707 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=71.5 pTM=0.65 ipTM=0.154 tol=1.23 2024-07-11 18:26:34,006 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=71.5 pTM=0.651 ipTM=0.149 tol=0.807 2024-07-11 18:26:51,298 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=71.4 pTM=0.651 ipTM=0.153 tol=0.827 2024-07-11 18:27:08,599 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=71.5 pTM=0.653 ipTM=0.16 tol=1.88 2024-07-11 18:27:25,910 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=71.6 pTM=0.652 ipTM=0.153 tol=1.71 2024-07-11 18:27:43,214 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=71.4 pTM=0.651 ipTM=0.157 tol=1.07 2024-07-11 18:28:00,519 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=71.2 pTM=0.646 ipTM=0.153 tol=0.86 2024-07-11 18:28:17,823 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=71.1 pTM=0.646 ipTM=0.154 tol=0.782 2024-07-11 18:28:35,126 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=71.1 pTM=0.641 ipTM=0.153 tol=0.999 2024-07-11 18:28:52,430 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=71.1 pTM=0.643 ipTM=0.156 tol=0.647 2024-07-11 18:29:09,731 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=71.1 pTM=0.641 ipTM=0.153 tol=0.555 2024-07-11 18:29:27,034 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=71.1 pTM=0.643 ipTM=0.154 tol=1.1 2024-07-11 18:29:44,338 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=71.1 pTM=0.645 ipTM=0.152 tol=1.33 2024-07-11 18:30:01,636 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=71.2 pTM=0.644 ipTM=0.151 tol=1.41 2024-07-11 18:30:18,934 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=71.1 pTM=0.646 ipTM=0.153 tol=1.2 2024-07-11 18:30:36,233 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=71.1 pTM=0.641 ipTM=0.149 tol=1.03 2024-07-11 18:30:53,526 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=71 pTM=0.642 ipTM=0.153 tol=1.44 2024-07-11 18:31:10,818 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=71.2 pTM=0.641 ipTM=0.152 tol=1.42 2024-07-11 18:31:28,115 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=71 pTM=0.641 ipTM=0.151 tol=1.12 2024-07-11 18:31:45,411 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=71.1 pTM=0.639 ipTM=0.152 tol=1.07 2024-07-11 18:32:02,717 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=71.1 pTM=0.636 ipTM=0.149 tol=1.23 2024-07-11 18:32:02,718 alphafold2_multimer_v3_model_2_seed_000 took 536.4s (30 recycles) 2024-07-11 18:32:20,522 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=69.4 pTM=0.615 ipTM=0.142 2024-07-11 18:32:37,825 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=70.4 pTM=0.64 ipTM=0.151 tol=5.5 2024-07-11 18:32:55,121 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=69.9 pTM=0.625 ipTM=0.151 tol=3.32 2024-07-11 18:33:12,420 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=69.4 pTM=0.614 ipTM=0.152 tol=1.81 2024-07-11 18:33:29,720 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=70.2 pTM=0.619 ipTM=0.153 tol=0.947 2024-07-11 18:33:47,010 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=70.2 pTM=0.616 ipTM=0.154 tol=0.967 2024-07-11 18:34:04,306 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=70.3 pTM=0.613 ipTM=0.152 tol=0.991 2024-07-11 18:34:21,595 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=70.2 pTM=0.615 ipTM=0.154 tol=0.843 2024-07-11 18:34:38,890 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=70.1 pTM=0.616 ipTM=0.167 tol=2.12 2024-07-11 18:34:56,181 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=70.3 pTM=0.624 ipTM=0.173 tol=0.912 2024-07-11 18:35:13,477 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=69.8 pTM=0.612 ipTM=0.157 tol=1.75 2024-07-11 18:35:30,772 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=69.6 pTM=0.613 ipTM=0.165 tol=1.56 2024-07-11 18:35:48,074 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=69.8 pTM=0.618 ipTM=0.162 tol=1.65 2024-07-11 18:36:05,380 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=69.4 pTM=0.619 ipTM=0.147 tol=5.05 2024-07-11 18:36:22,684 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=70.1 pTM=0.624 ipTM=0.151 tol=2.32 2024-07-11 18:36:39,984 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=70.1 pTM=0.624 ipTM=0.153 tol=1 2024-07-11 18:36:57,289 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=70.1 pTM=0.62 ipTM=0.152 tol=0.788 2024-07-11 18:37:14,594 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=70.1 pTM=0.619 ipTM=0.155 tol=1.45 2024-07-11 18:37:31,885 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=69.9 pTM=0.612 ipTM=0.156 tol=0.819 2024-07-11 18:37:49,184 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=69.9 pTM=0.617 ipTM=0.157 tol=1.22 2024-07-11 18:38:06,488 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=70.1 pTM=0.615 ipTM=0.157 tol=0.687 2024-07-11 18:38:23,784 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=69.9 pTM=0.615 ipTM=0.156 tol=0.911 2024-07-11 18:38:41,073 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=69.9 pTM=0.612 ipTM=0.154 tol=1.01 2024-07-11 18:38:58,362 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=69.9 pTM=0.609 ipTM=0.152 tol=0.797 2024-07-11 18:39:15,664 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=69.7 pTM=0.61 ipTM=0.151 tol=0.521 2024-07-11 18:39:32,963 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=69.9 pTM=0.609 ipTM=0.149 tol=1.5 2024-07-11 18:39:50,251 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=69.7 pTM=0.606 ipTM=0.153 tol=1.81 2024-07-11 18:40:07,544 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=69.9 pTM=0.608 ipTM=0.152 tol=1.25 2024-07-11 18:40:24,837 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=69.8 pTM=0.605 ipTM=0.153 tol=1.31 2024-07-11 18:40:42,116 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=69.9 pTM=0.604 ipTM=0.155 tol=1.41 2024-07-11 18:40:59,408 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=70 pTM=0.602 ipTM=0.153 tol=1.11 2024-07-11 18:40:59,409 alphafold2_multimer_v3_model_3_seed_000 took 536.2s (30 recycles) 2024-07-11 18:41:17,207 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=66.8 pTM=0.596 ipTM=0.154 2024-07-11 18:41:34,503 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=68.6 pTM=0.607 ipTM=0.144 tol=6.23 2024-07-11 18:41:51,807 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=69.4 pTM=0.625 ipTM=0.154 tol=4.06 2024-07-11 18:42:09,108 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=69.4 pTM=0.624 ipTM=0.149 tol=3.58 2024-07-11 18:42:26,401 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=70.2 pTM=0.629 ipTM=0.159 tol=3.98 2024-07-11 18:42:43,692 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=70.4 pTM=0.635 ipTM=0.175 tol=2.11 2024-07-11 18:43:00,986 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=70.6 pTM=0.635 ipTM=0.18 tol=1.42 2024-07-11 18:43:18,281 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=70.2 pTM=0.635 ipTM=0.181 tol=0.829 2024-07-11 18:43:35,576 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=70.2 pTM=0.628 ipTM=0.184 tol=0.955 2024-07-11 18:43:52,869 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=70.4 pTM=0.635 ipTM=0.183 tol=0.578 2024-07-11 18:44:10,178 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=70.2 pTM=0.633 ipTM=0.177 tol=1.48 2024-07-11 18:44:27,483 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=70.1 pTM=0.632 ipTM=0.18 tol=1.91 2024-07-11 18:44:44,787 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=70.2 pTM=0.634 ipTM=0.177 tol=2.19 2024-07-11 18:45:02,091 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.4 pTM=0.641 ipTM=0.176 tol=1.77 2024-07-11 18:45:19,390 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=70.6 pTM=0.637 ipTM=0.187 tol=1.52 2024-07-11 18:45:36,683 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.2 pTM=0.634 ipTM=0.181 tol=2.12 2024-07-11 18:45:53,975 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.4 pTM=0.633 ipTM=0.177 tol=1.08 2024-07-11 18:46:11,269 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=70.2 pTM=0.636 ipTM=0.176 tol=1.24 2024-07-11 18:46:28,569 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=70.2 pTM=0.633 ipTM=0.176 tol=1.3 2024-07-11 18:46:45,863 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70.2 pTM=0.633 ipTM=0.18 tol=1.22 2024-07-11 18:47:03,160 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70.4 pTM=0.633 ipTM=0.18 tol=1.86 2024-07-11 18:47:20,457 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=70.1 pTM=0.63 ipTM=0.179 tol=1.04 2024-07-11 18:47:37,770 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=70.2 pTM=0.632 ipTM=0.179 tol=0.987 2024-07-11 18:47:55,074 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=70.4 pTM=0.629 ipTM=0.184 tol=1.66 2024-07-11 18:48:12,392 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=70.3 pTM=0.636 ipTM=0.18 tol=0.876 2024-07-11 18:48:29,703 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.3 pTM=0.631 ipTM=0.184 tol=0.862 2024-07-11 18:48:47,018 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.4 pTM=0.635 ipTM=0.179 tol=0.619 2024-07-11 18:49:04,329 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=70.4 pTM=0.633 ipTM=0.183 tol=1.11 2024-07-11 18:49:21,646 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=70.2 pTM=0.633 ipTM=0.175 tol=1.62 2024-07-11 18:49:38,959 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=70.3 pTM=0.632 ipTM=0.178 tol=0.959 2024-07-11 18:49:56,267 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70.4 pTM=0.631 ipTM=0.184 tol=0.824 2024-07-11 18:49:56,268 alphafold2_multimer_v3_model_4_seed_000 took 536.3s (30 recycles) 2024-07-11 18:50:14,072 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=68 pTM=0.604 ipTM=0.142 2024-07-11 18:50:31,389 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=68.6 pTM=0.619 ipTM=0.141 tol=6.34 2024-07-11 18:50:48,708 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=68.8 pTM=0.61 ipTM=0.132 tol=5.19 2024-07-11 18:51:06,029 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=68.8 pTM=0.605 ipTM=0.14 tol=3.65 2024-07-11 18:51:23,362 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=69.6 pTM=0.612 ipTM=0.147 tol=2.79 2024-07-11 18:51:40,696 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=69.8 pTM=0.616 ipTM=0.146 tol=1.61 2024-07-11 18:51:58,026 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=69.4 pTM=0.607 ipTM=0.145 tol=1.87 2024-07-11 18:52:15,354 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=69.4 pTM=0.613 ipTM=0.147 tol=1.15 2024-07-11 18:52:32,690 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=69.3 pTM=0.607 ipTM=0.155 tol=1.16 2024-07-11 18:52:50,026 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=69.7 pTM=0.618 ipTM=0.149 tol=0.813 2024-07-11 18:53:07,363 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=69.4 pTM=0.61 ipTM=0.148 tol=0.978 2024-07-11 18:53:24,699 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=69.2 pTM=0.609 ipTM=0.145 tol=0.62 2024-07-11 18:53:42,024 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=69.3 pTM=0.611 ipTM=0.142 tol=0.813 2024-07-11 18:53:59,348 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=69.3 pTM=0.609 ipTM=0.142 tol=0.737 2024-07-11 18:54:16,665 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=69.7 pTM=0.615 ipTM=0.146 tol=0.872 2024-07-11 18:54:33,983 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=69.4 pTM=0.609 ipTM=0.142 tol=1.11 2024-07-11 18:54:51,299 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=69.3 pTM=0.609 ipTM=0.142 tol=0.855 2024-07-11 18:55:08,626 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=69.2 pTM=0.605 ipTM=0.14 tol=1.02 2024-07-11 18:55:25,941 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=69.1 pTM=0.6 ipTM=0.142 tol=0.687 2024-07-11 18:55:43,254 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=69.1 pTM=0.603 ipTM=0.14 tol=0.771 2024-07-11 18:56:00,569 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=69.1 pTM=0.6 ipTM=0.138 tol=0.91 2024-07-11 18:56:17,884 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=69.2 pTM=0.604 ipTM=0.139 tol=1.08 2024-07-11 18:56:35,195 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=69.2 pTM=0.603 ipTM=0.139 tol=0.668 2024-07-11 18:56:52,511 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=69.3 pTM=0.603 ipTM=0.141 tol=1.11 2024-07-11 18:57:09,832 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=69.1 pTM=0.606 ipTM=0.141 tol=0.967 2024-07-11 18:57:27,147 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=69 pTM=0.602 ipTM=0.149 tol=1.23 2024-07-11 18:57:44,465 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=69.2 pTM=0.606 ipTM=0.146 tol=1.1 2024-07-11 18:58:01,777 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=69.1 pTM=0.603 ipTM=0.143 tol=0.951 2024-07-11 18:58:19,087 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=69.1 pTM=0.606 ipTM=0.145 tol=0.737 2024-07-11 18:58:36,409 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=69.1 pTM=0.598 ipTM=0.143 tol=0.965 2024-07-11 18:58:53,718 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=69.2 pTM=0.602 ipTM=0.144 tol=1.53 2024-07-11 18:58:53,718 alphafold2_multimer_v3_model_5_seed_000 took 536.9s (30 recycles) 2024-07-11 18:58:54,227 reranking models by 'multimer' metric 2024-07-11 18:59:19,999 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-11 19:00:38,344 Relaxation took 104.1s 2024-07-11 19:00:38,344 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70.4 pTM=0.631 ipTM=0.184 2024-07-11 19:01:42,552 Relaxation took 64.2s 2024-07-11 19:01:42,552 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=71.1 pTM=0.636 ipTM=0.149 2024-07-11 19:02:13,377 Relaxation took 30.8s 2024-07-11 19:02:13,377 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=70 pTM=0.612 ipTM=0.153 2024-07-11 19:03:07,187 Relaxation took 53.8s 2024-07-11 19:03:07,188 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=70 pTM=0.602 ipTM=0.153 2024-07-11 19:03:36,935 Relaxation took 29.7s 2024-07-11 19:03:36,936 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=69.2 pTM=0.602 ipTM=0.144 2024-07-11 19:03:38,531 Done