2024-07-11 18:25:35,129 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 18:25:35,469 Running on GPU
2024-07-11 18:25:46,046 Found 6 citations for tools or databases
2024-07-11 18:25:46,046 Query 1/1: NPAS3_O52N4 (length 1254)
2024-07-11 18:25:46,576 Sleeping for 5s. Reason: PENDING
2024-07-11 18:25:51,985 Sleeping for 7s. Reason: RUNNING
2024-07-11 18:25:59,396 Sleeping for 5s. Reason: RUNNING
2024-07-11 18:26:04,796 Sleeping for 7s. Reason: RUNNING
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2024-07-11 18:26:41,849 Sleeping for 8s. Reason: RUNNING
2024-07-11 18:26:50,270 Sleeping for 8s. Reason: RUNNING
2024-07-11 18:26:58,683 Sleeping for 10s. Reason: RUNNING
2024-07-11 18:27:09,098 Sleeping for 6s. Reason: RUNNING
2024-07-11 18:27:15,502 Sleeping for 10s. Reason: RUNNING
2024-07-11 18:27:25,932 Sleeping for 5s. Reason: RUNNING
2024-07-11 18:27:31,359 Sleeping for 10s. Reason: RUNNING
2024-07-11 18:27:41,776 Sleeping for 10s. Reason: RUNNING
2024-07-11 18:27:52,180 Sleeping for 10s. Reason: RUNNING
2024-07-11 18:28:02,626 Sleeping for 7s. Reason: RUNNING
2024-07-11 18:28:10,045 Sleeping for 6s. Reason: RUNNING
2024-07-11 18:28:16,439 Sleeping for 10s. Reason: RUNNING
2024-07-11 18:28:26,885 Sleeping for 8s. Reason: RUNNING
2024-07-11 18:28:35,299 Sleeping for 6s. Reason: RUNNING
2024-07-11 18:28:41,707 Sleeping for 8s. Reason: RUNNING
2024-07-11 18:28:50,128 Sleeping for 9s. Reason: RUNNING
2024-07-11 18:29:01,297 Sleeping for 10s. Reason: PENDING
2024-07-11 18:29:11,706 Sleeping for 5s. Reason: RUNNING
2024-07-11 18:29:17,097 Sleeping for 9s. Reason: RUNNING
2024-07-11 18:29:26,518 Sleeping for 7s. Reason: RUNNING
2024-07-11 18:29:33,911 Sleeping for 7s. Reason: RUNNING
2024-07-11 18:29:41,308 Sleeping for 5s. Reason: RUNNING
2024-07-11 18:29:46,717 Sleeping for 5s. Reason: RUNNING
2024-07-11 18:29:52,129 Sleeping for 6s. Reason: RUNNING
2024-07-11 18:29:58,544 Sleeping for 9s. Reason: RUNNING
2024-07-11 18:30:07,943 Sleeping for 8s. Reason: RUNNING
2024-07-11 18:30:16,345 Sleeping for 8s. Reason: RUNNING
2024-07-11 18:30:24,754 Sleeping for 10s. Reason: RUNNING
2024-07-11 18:30:35,228 Sleeping for 10s. Reason: RUNNING
2024-07-11 18:30:45,647 Sleeping for 5s. Reason: RUNNING
2024-07-11 18:30:51,085 Sleeping for 7s. Reason: RUNNING
2024-07-11 18:30:58,501 Sleeping for 7s. Reason: RUNNING
2024-07-11 18:31:05,916 Sleeping for 6s. Reason: RUNNING
2024-07-11 18:31:12,325 Sleeping for 10s. Reason: RUNNING
2024-07-11 18:31:22,763 Sleeping for 5s. Reason: RUNNING
2024-07-11 18:31:30,979 Setting max_seq=508, max_extra_seq=2048
2024-07-11 18:35:15,241 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=50.2 pTM=0.367 ipTM=0.193
2024-07-11 18:35:54,391 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=51.3 pTM=0.358 ipTM=0.185 tol=8.86
2024-07-11 18:36:33,677 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=51.2 pTM=0.359 ipTM=0.179 tol=9.67
2024-07-11 18:37:13,091 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=50.8 pTM=0.356 ipTM=0.18 tol=6.38
2024-07-11 18:37:52,709 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=51.3 pTM=0.357 ipTM=0.185 tol=8.2
2024-07-11 18:38:32,226 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=51.5 pTM=0.357 ipTM=0.184 tol=2.93
2024-07-11 18:39:11,768 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=51.5 pTM=0.354 ipTM=0.186 tol=4.56
2024-07-11 18:39:51,243 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=51.4 pTM=0.354 ipTM=0.188 tol=4.5
2024-07-11 18:40:30,732 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=51.4 pTM=0.352 ipTM=0.189 tol=2.65
2024-07-11 18:41:10,237 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=51.6 pTM=0.352 ipTM=0.182 tol=4.76
2024-07-11 18:41:49,882 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=51.5 pTM=0.351 ipTM=0.184 tol=5.42
2024-07-11 18:42:29,546 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=51.4 pTM=0.35 ipTM=0.182 tol=3.23
2024-07-11 18:43:09,193 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=51.6 pTM=0.351 ipTM=0.187 tol=1.99
2024-07-11 18:43:48,747 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=51.3 pTM=0.349 ipTM=0.183 tol=2.05
2024-07-11 18:44:28,403 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=51.5 pTM=0.351 ipTM=0.186 tol=2.92
2024-07-11 18:45:08,068 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=51.7 pTM=0.351 ipTM=0.187 tol=2.23
2024-07-11 18:45:47,760 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=51.7 pTM=0.35 ipTM=0.185 tol=2.5
2024-07-11 18:46:27,442 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=51.4 pTM=0.349 ipTM=0.182 tol=3.73
2024-07-11 18:47:07,124 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=51.6 pTM=0.349 ipTM=0.183 tol=2.97
2024-07-11 18:47:46,833 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=51.4 pTM=0.348 ipTM=0.178 tol=4.29
2024-07-11 18:48:26,475 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=51.5 pTM=0.349 ipTM=0.183 tol=3.65
2024-07-11 18:49:06,159 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=51.4 pTM=0.349 ipTM=0.182 tol=3.96
2024-07-11 18:49:45,825 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=51.1 pTM=0.35 ipTM=0.189 tol=3.06
2024-07-11 18:50:25,398 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=51.4 pTM=0.348 ipTM=0.185 tol=4.11
2024-07-11 18:51:05,095 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=51.4 pTM=0.348 ipTM=0.183 tol=3.28
2024-07-11 18:51:44,740 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=51.5 pTM=0.348 ipTM=0.183 tol=7.45
2024-07-11 18:52:24,446 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=51.6 pTM=0.349 ipTM=0.183 tol=7.64
2024-07-11 18:53:04,081 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=51.2 pTM=0.349 ipTM=0.186 tol=3.67
2024-07-11 18:53:43,785 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=51.3 pTM=0.348 ipTM=0.183 tol=3.57
2024-07-11 18:54:23,489 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=51.5 pTM=0.348 ipTM=0.179 tol=1.84
2024-07-11 18:55:03,175 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=51.1 pTM=0.351 ipTM=0.188 tol=2.15
2024-07-11 18:55:03,176 alphafold2_multimer_v3_model_1_seed_000 took 1369.0s (30 recycles)
2024-07-11 18:55:43,740 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=50.3 pTM=0.351 ipTM=0.169
2024-07-11 18:56:23,483 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=51.6 pTM=0.369 ipTM=0.202 tol=13.2
2024-07-11 18:57:03,270 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=51.3 pTM=0.356 ipTM=0.189 tol=14.2
2024-07-11 18:57:43,083 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=51.3 pTM=0.353 ipTM=0.189 tol=7.91
2024-07-11 18:58:22,801 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=51.4 pTM=0.349 ipTM=0.183 tol=8.48
2024-07-11 18:59:02,509 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=51.2 pTM=0.347 ipTM=0.183 tol=4.13
2024-07-11 18:59:42,334 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=51.2 pTM=0.347 ipTM=0.186 tol=5.7
2024-07-11 19:00:22,160 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=51.1 pTM=0.348 ipTM=0.19 tol=4.23
2024-07-11 19:01:01,902 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=50.9 pTM=0.347 ipTM=0.189 tol=4.23
2024-07-11 19:01:41,690 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=51 pTM=0.346 ipTM=0.185 tol=10.5
2024-07-11 19:02:21,481 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=50.9 pTM=0.347 ipTM=0.187 tol=10.9
2024-07-11 19:03:01,242 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=50.8 pTM=0.347 ipTM=0.194 tol=3.96
2024-07-11 19:03:41,007 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=51.2 pTM=0.351 ipTM=0.203 tol=10.8
2024-07-11 19:04:20,685 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=51.1 pTM=0.348 ipTM=0.195 tol=4.16
2024-07-11 19:05:00,333 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=51.4 pTM=0.353 ipTM=0.207 tol=8.73
2024-07-11 19:05:40,068 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=51.2 pTM=0.351 ipTM=0.207 tol=7.49
2024-07-11 19:06:19,833 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=51.3 pTM=0.351 ipTM=0.205 tol=7.62
2024-07-11 19:06:59,585 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=51.2 pTM=0.349 ipTM=0.197 tol=4.09
2024-07-11 19:07:39,370 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=51.4 pTM=0.349 ipTM=0.2 tol=7.76
2024-07-11 19:08:19,170 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=51.2 pTM=0.348 ipTM=0.195 tol=5.17
2024-07-11 19:08:58,862 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=51.3 pTM=0.348 ipTM=0.197 tol=8.2
2024-07-11 19:09:38,571 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=51.3 pTM=0.348 ipTM=0.194 tol=3.17
2024-07-11 19:10:18,333 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=51.3 pTM=0.351 ipTM=0.211 tol=4.89
2024-07-11 19:10:58,082 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=51.2 pTM=0.348 ipTM=0.195 tol=8.01
2024-07-11 19:11:37,995 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=51.4 pTM=0.354 ipTM=0.203 tol=3.76
2024-07-11 19:12:17,748 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=51.2 pTM=0.347 ipTM=0.193 tol=2.46
2024-07-11 19:12:57,520 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=51.5 pTM=0.351 ipTM=0.203 tol=4.17
2024-07-11 19:13:37,301 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=51.3 pTM=0.348 ipTM=0.197 tol=7
2024-07-11 19:14:16,991 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=51.3 pTM=0.348 ipTM=0.2 tol=6.87
2024-07-11 19:14:56,680 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=51.3 pTM=0.348 ipTM=0.198 tol=6.54
2024-07-11 19:15:36,472 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=51.3 pTM=0.351 ipTM=0.203 tol=5.73
2024-07-11 19:15:36,473 alphafold2_multimer_v3_model_2_seed_000 took 1232.4s (30 recycles)
2024-07-11 19:16:17,262 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=50.3 pTM=0.334 ipTM=0.158
2024-07-11 19:16:57,242 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=50.9 pTM=0.357 ipTM=0.151 tol=19.8
2024-07-11 19:17:37,169 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=50.2 pTM=0.344 ipTM=0.157 tol=10.1
2024-07-11 19:18:17,000 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=50.6 pTM=0.348 ipTM=0.165 tol=8.17
2024-07-11 19:18:56,797 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=50.4 pTM=0.348 ipTM=0.17 tol=7.13
2024-07-11 19:19:36,588 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=50.5 pTM=0.351 ipTM=0.176 tol=4.18
2024-07-11 19:20:16,368 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=50.5 pTM=0.352 ipTM=0.184 tol=6.3
2024-07-11 19:20:56,241 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=50.7 pTM=0.355 ipTM=0.193 tol=8.8
2024-07-11 19:21:36,107 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=50.3 pTM=0.355 ipTM=0.194 tol=6.3
2024-07-11 19:22:15,950 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=50.7 pTM=0.356 ipTM=0.195 tol=9.41
2024-07-11 19:22:55,832 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=50.6 pTM=0.356 ipTM=0.196 tol=6.34
2024-07-11 19:23:35,697 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=50.7 pTM=0.358 ipTM=0.204 tol=4.33
2024-07-11 19:24:15,590 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=50.6 pTM=0.357 ipTM=0.201 tol=3.05
2024-07-11 19:24:55,378 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=50.6 pTM=0.357 ipTM=0.2 tol=3.62
2024-07-11 19:25:35,156 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=50.6 pTM=0.357 ipTM=0.204 tol=4.15
2024-07-11 19:26:15,054 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=50.8 pTM=0.359 ipTM=0.204 tol=3.08
2024-07-11 19:26:54,955 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=50.7 pTM=0.357 ipTM=0.2 tol=6.23
2024-07-11 19:27:34,841 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=50.7 pTM=0.358 ipTM=0.201 tol=6.54
2024-07-11 19:28:14,609 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=50.8 pTM=0.357 ipTM=0.202 tol=6.16
2024-07-11 19:28:54,402 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=50.8 pTM=0.358 ipTM=0.2 tol=6.71
2024-07-11 19:29:34,277 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=50.7 pTM=0.357 ipTM=0.2 tol=5.09
2024-07-11 19:30:14,172 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=50.8 pTM=0.357 ipTM=0.201 tol=3.13
2024-07-11 19:30:54,038 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=50.7 pTM=0.355 ipTM=0.197 tol=6.71
2024-07-11 19:31:33,944 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=50.8 pTM=0.356 ipTM=0.198 tol=8.88
2024-07-11 19:32:13,733 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=50.7 pTM=0.358 ipTM=0.204 tol=3.09
2024-07-11 19:32:53,520 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=50.7 pTM=0.355 ipTM=0.197 tol=3.42
2024-07-11 19:33:33,307 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=50.9 pTM=0.358 ipTM=0.208 tol=7.31
2024-07-11 19:34:13,105 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=50.6 pTM=0.357 ipTM=0.202 tol=8.56
2024-07-11 19:34:52,900 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=50.8 pTM=0.358 ipTM=0.206 tol=3.43
2024-07-11 19:35:32,786 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=50.8 pTM=0.355 ipTM=0.196 tol=2.49
2024-07-11 19:36:12,673 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=50.7 pTM=0.358 ipTM=0.204 tol=2.34
2024-07-11 19:36:12,674 alphafold2_multimer_v3_model_3_seed_000 took 1235.3s (30 recycles)
2024-07-11 19:36:53,299 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=48.4 pTM=0.379 ipTM=0.254
2024-07-11 19:37:33,060 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=48.9 pTM=0.362 ipTM=0.197 tol=14.3
2024-07-11 19:38:12,872 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=49.3 pTM=0.373 ipTM=0.261 tol=9.91
2024-07-11 19:38:52,718 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=49.4 pTM=0.362 ipTM=0.217 tol=10.5
2024-07-11 19:39:32,571 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=49.6 pTM=0.362 ipTM=0.224 tol=8.95
2024-07-11 19:40:12,425 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=49.2 pTM=0.362 ipTM=0.227 tol=8.95
2024-07-11 19:40:52,301 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=49.3 pTM=0.364 ipTM=0.229 tol=6.19
2024-07-11 19:41:32,208 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=49.4 pTM=0.362 ipTM=0.23 tol=8.9
2024-07-11 19:42:12,111 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=49.2 pTM=0.363 ipTM=0.224 tol=5.21
2024-07-11 19:42:52,002 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=49.2 pTM=0.362 ipTM=0.233 tol=9.11
2024-07-11 19:43:31,820 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=49.4 pTM=0.363 ipTM=0.226 tol=7.8
2024-07-11 19:44:11,656 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=49.4 pTM=0.363 ipTM=0.233 tol=11.4
2024-07-11 19:44:51,529 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=49.2 pTM=0.363 ipTM=0.231 tol=8.52
2024-07-11 19:45:31,423 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=49.3 pTM=0.362 ipTM=0.236 tol=7.53
2024-07-11 19:46:11,336 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=49.5 pTM=0.364 ipTM=0.233 tol=10.2
2024-07-11 19:46:51,162 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=49.6 pTM=0.362 ipTM=0.231 tol=11.5
2024-07-11 19:47:30,929 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=49.6 pTM=0.365 ipTM=0.234 tol=5.66
2024-07-11 19:48:10,763 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=49.5 pTM=0.361 ipTM=0.232 tol=5.42
2024-07-11 19:48:50,620 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=49.5 pTM=0.364 ipTM=0.233 tol=6.55
2024-07-11 19:49:30,633 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=49.3 pTM=0.36 ipTM=0.226 tol=6.05
2024-07-11 19:50:10,505 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=49.1 pTM=0.363 ipTM=0.225 tol=7.79
2024-07-11 19:50:50,385 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=49.2 pTM=0.361 ipTM=0.228 tol=8.8
2024-07-11 19:51:30,154 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=49.2 pTM=0.364 ipTM=0.228 tol=9.38
2024-07-11 19:52:10,051 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=49.4 pTM=0.36 ipTM=0.229 tol=9.79
2024-07-11 19:52:49,965 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=49.4 pTM=0.364 ipTM=0.229 tol=6.22
2024-07-11 19:53:29,880 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=49.3 pTM=0.361 ipTM=0.231 tol=7.39
2024-07-11 19:54:09,776 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=49.4 pTM=0.364 ipTM=0.229 tol=4.63
2024-07-11 19:54:49,651 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=49.2 pTM=0.361 ipTM=0.23 tol=5.43
2024-07-11 19:55:29,520 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=49.4 pTM=0.366 ipTM=0.237 tol=6.56
2024-07-11 19:56:09,374 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=49.5 pTM=0.361 ipTM=0.223 tol=7.57
2024-07-11 19:56:49,247 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=49.2 pTM=0.366 ipTM=0.231 tol=3.77
2024-07-11 19:56:49,249 alphafold2_multimer_v3_model_4_seed_000 took 1235.6s (30 recycles)
2024-07-11 19:57:30,735 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=49 pTM=0.359 ipTM=0.278
2024-07-11 19:58:10,738 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=50.4 pTM=0.357 ipTM=0.177 tol=12.3
2024-07-11 19:58:50,551 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=50.2 pTM=0.348 ipTM=0.183 tol=11.5
2024-07-11 19:59:30,480 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=50.6 pTM=0.349 ipTM=0.197 tol=10.3
2024-07-11 20:00:10,389 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=50.6 pTM=0.349 ipTM=0.195 tol=7.52
2024-07-11 20:00:50,270 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=50.7 pTM=0.351 ipTM=0.208 tol=9.94
2024-07-11 20:01:30,269 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=50.5 pTM=0.352 ipTM=0.211 tol=5.55
2024-07-11 20:02:10,044 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=50.6 pTM=0.354 ipTM=0.213 tol=6.28
2024-07-11 20:02:49,791 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=50.4 pTM=0.351 ipTM=0.209 tol=7.86
2024-07-11 20:03:29,685 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=50.6 pTM=0.352 ipTM=0.21 tol=7.03
2024-07-11 20:04:09,741 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=50.4 pTM=0.352 ipTM=0.209 tol=4.66
2024-07-11 20:04:49,534 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=50.5 pTM=0.353 ipTM=0.221 tol=4.43
2024-07-11 20:05:29,302 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=50.4 pTM=0.352 ipTM=0.213 tol=4.95
2024-07-11 20:06:09,189 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=50.3 pTM=0.352 ipTM=0.213 tol=2.98
2024-07-11 20:06:49,044 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=50.4 pTM=0.352 ipTM=0.215 tol=3.78
2024-07-11 20:07:28,973 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=50.6 pTM=0.354 ipTM=0.218 tol=6.16
2024-07-11 20:08:08,893 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=50.5 pTM=0.35 ipTM=0.208 tol=9.66
2024-07-11 20:08:48,836 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=50.5 pTM=0.351 ipTM=0.214 tol=8.03
2024-07-11 20:09:28,748 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=50.6 pTM=0.351 ipTM=0.208 tol=6.14
2024-07-11 20:10:08,656 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=50.4 pTM=0.353 ipTM=0.214 tol=6.46
2024-07-11 20:10:48,443 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=50.5 pTM=0.353 ipTM=0.213 tol=5.56
2024-07-11 20:11:28,312 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=50.5 pTM=0.352 ipTM=0.208 tol=5.16
2024-07-11 20:12:08,112 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=50.3 pTM=0.35 ipTM=0.206 tol=2.96
2024-07-11 20:12:47,981 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=50.3 pTM=0.351 ipTM=0.207 tol=2.83
2024-07-11 20:13:27,745 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=50.7 pTM=0.355 ipTM=0.211 tol=6.01
2024-07-11 20:14:07,592 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=50.4 pTM=0.352 ipTM=0.213 tol=5
2024-07-11 20:14:47,586 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=50.4 pTM=0.352 ipTM=0.217 tol=2.77
2024-07-11 20:15:27,333 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=50.3 pTM=0.353 ipTM=0.218 tol=5.14
2024-07-11 20:16:07,181 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=50.4 pTM=0.353 ipTM=0.218 tol=6.61
2024-07-11 20:16:47,032 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=50.4 pTM=0.352 ipTM=0.217 tol=2.33
2024-07-11 20:17:26,914 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=50.4 pTM=0.351 ipTM=0.209 tol=2.62
2024-07-11 20:17:26,915 alphafold2_multimer_v3_model_5_seed_000 took 1235.9s (30 recycles)
2024-07-11 20:17:27,860 reranking models by 'multimer' metric
2024-07-11 20:17:29,156 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 20:19:31,374 Relaxation took 123.5s
2024-07-11 20:19:31,374 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=49.2 pTM=0.366 ipTM=0.231
2024-07-11 20:21:51,008 Relaxation took 139.6s
2024-07-11 20:21:51,009 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=50.4 pTM=0.351 ipTM=0.209
2024-07-11 20:23:34,241 Relaxation took 103.2s
2024-07-11 20:23:34,242 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=50.7 pTM=0.358 ipTM=0.204
2024-07-11 20:25:58,843 Relaxation took 144.6s
2024-07-11 20:25:58,843 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=51.3 pTM=0.351 ipTM=0.203
2024-07-11 20:28:20,037 Relaxation took 141.2s
2024-07-11 20:28:20,037 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=51.1 pTM=0.351 ipTM=0.188
2024-07-11 20:28:22,560 Done