2024-07-11 19:05:55,049 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-11 19:05:55,362 Running on GPU 2024-07-11 19:06:11,886 Found 6 citations for tools or databases 2024-07-11 19:06:11,886 Query 1/1: NPBW1_CALR3 (length 712) 2024-07-11 19:06:12,362 Sleeping for 8s. Reason: PENDING 2024-07-11 19:06:20,789 Sleeping for 9s. Reason: RUNNING 2024-07-11 19:06:30,198 Sleeping for 10s. Reason: RUNNING 2024-07-11 19:06:40,620 Sleeping for 7s. Reason: RUNNING 2024-07-11 19:06:48,067 Sleeping for 8s. Reason: RUNNING 2024-07-11 19:06:56,533 Sleeping for 8s. Reason: RUNNING 2024-07-11 19:07:04,948 Sleeping for 6s. Reason: RUNNING 2024-07-11 19:07:11,348 Sleeping for 7s. Reason: RUNNING 2024-07-11 19:07:18,774 Sleeping for 6s. Reason: RUNNING 2024-07-11 19:07:25,178 Sleeping for 6s. Reason: RUNNING 2024-07-11 19:07:31,590 Sleeping for 7s. Reason: RUNNING 2024-07-11 19:07:39,010 Sleeping for 9s. Reason: RUNNING 2024-07-11 19:07:50,288 Sleeping for 9s. Reason: PENDING 2024-07-11 19:07:59,709 Sleeping for 7s. Reason: RUNNING 2024-07-11 19:08:07,112 Sleeping for 8s. Reason: RUNNING 2024-07-11 19:08:15,531 Sleeping for 6s. Reason: RUNNING 2024-07-11 19:08:21,937 Sleeping for 10s. Reason: RUNNING 2024-07-11 19:08:32,356 Sleeping for 6s. Reason: RUNNING 2024-07-11 19:08:38,772 Sleeping for 9s. Reason: RUNNING 2024-07-11 19:08:48,175 Sleeping for 9s. Reason: RUNNING 2024-07-11 19:08:57,596 Sleeping for 6s. Reason: RUNNING 2024-07-11 19:09:06,876 Setting max_seq=508, max_extra_seq=2048 2024-07-11 19:12:06,119 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=67.6 pTM=0.452 ipTM=0.164 2024-07-11 19:12:15,625 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=68.7 pTM=0.461 ipTM=0.17 tol=21.2 2024-07-11 19:12:25,148 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=68 pTM=0.454 ipTM=0.164 tol=4.35 2024-07-11 19:12:34,689 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=68.7 pTM=0.458 ipTM=0.171 tol=1.92 2024-07-11 19:12:44,242 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=68.4 pTM=0.457 ipTM=0.165 tol=2.02 2024-07-11 19:12:53,801 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=68.9 pTM=0.461 ipTM=0.175 tol=1.31 2024-07-11 19:13:03,389 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=68.6 pTM=0.459 ipTM=0.167 tol=4.15 2024-07-11 19:13:12,962 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=68.7 pTM=0.456 ipTM=0.165 tol=4.01 2024-07-11 19:13:22,557 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=68.1 pTM=0.459 ipTM=0.166 tol=3.62 2024-07-11 19:13:32,153 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=68.4 pTM=0.459 ipTM=0.167 tol=4.77 2024-07-11 19:13:41,745 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=68.4 pTM=0.454 ipTM=0.158 tol=3.06 2024-07-11 19:13:51,336 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=69 pTM=0.456 ipTM=0.163 tol=2.3 2024-07-11 19:14:00,958 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.6 pTM=0.46 ipTM=0.167 tol=5.1 2024-07-11 19:14:10,568 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=68.9 pTM=0.459 ipTM=0.167 tol=5.44 2024-07-11 19:14:20,177 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=68.6 pTM=0.449 ipTM=0.151 tol=7.22 2024-07-11 19:14:29,769 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=68.9 pTM=0.452 ipTM=0.159 tol=1.7 2024-07-11 19:14:39,393 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=68.1 pTM=0.458 ipTM=0.166 tol=6.74 2024-07-11 19:14:49,003 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=68.3 pTM=0.462 ipTM=0.173 tol=12.9 2024-07-11 19:14:58,588 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=68.2 pTM=0.468 ipTM=0.187 tol=5.65 2024-07-11 19:15:08,176 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=68.7 pTM=0.459 ipTM=0.173 tol=2.34 2024-07-11 19:15:17,763 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=68.8 pTM=0.462 ipTM=0.178 tol=2.06 2024-07-11 19:15:27,369 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=68.8 pTM=0.46 ipTM=0.172 tol=1.69 2024-07-11 19:15:36,957 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=68.6 pTM=0.463 ipTM=0.182 tol=1.79 2024-07-11 19:15:46,545 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=68.9 pTM=0.46 ipTM=0.174 tol=1.52 2024-07-11 19:15:56,134 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=68.7 pTM=0.465 ipTM=0.186 tol=2.01 2024-07-11 19:16:05,726 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=68.7 pTM=0.463 ipTM=0.182 tol=0.97 2024-07-11 19:16:15,314 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=68.8 pTM=0.466 ipTM=0.188 tol=0.899 2024-07-11 19:16:24,902 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=68.6 pTM=0.46 ipTM=0.186 tol=0.622 2024-07-11 19:16:34,485 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=68.8 pTM=0.464 ipTM=0.187 tol=0.884 2024-07-11 19:16:44,081 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=68.8 pTM=0.461 ipTM=0.208 tol=0.848 2024-07-11 19:16:53,673 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=68.9 pTM=0.466 ipTM=0.189 tol=3.93 2024-07-11 19:16:53,674 alphafold2_multimer_v3_model_1_seed_000 took 407.1s (30 recycles) 2024-07-11 19:17:03,599 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=70.4 pTM=0.455 ipTM=0.167 2024-07-11 19:17:13,215 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=71.1 pTM=0.472 ipTM=0.184 tol=22.2 2024-07-11 19:17:22,835 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=70.8 pTM=0.472 ipTM=0.18 tol=2.56 2024-07-11 19:17:32,453 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=71.1 pTM=0.478 ipTM=0.195 tol=1.72 2024-07-11 19:17:42,060 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=71 pTM=0.474 ipTM=0.187 tol=0.973 2024-07-11 19:17:51,671 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=71 pTM=0.481 ipTM=0.204 tol=1.52 2024-07-11 19:18:01,276 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=71.2 pTM=0.476 ipTM=0.19 tol=1.37 2024-07-11 19:18:10,880 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=71 pTM=0.486 ipTM=0.214 tol=1.38 2024-07-11 19:18:20,488 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=71 pTM=0.478 ipTM=0.195 tol=0.962 2024-07-11 19:18:30,082 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=71.1 pTM=0.486 ipTM=0.214 tol=0.829 2024-07-11 19:18:39,684 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=71.1 pTM=0.477 ipTM=0.193 tol=0.934 2024-07-11 19:18:49,282 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=71.1 pTM=0.485 ipTM=0.211 tol=1.22 2024-07-11 19:18:58,892 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=71.1 pTM=0.479 ipTM=0.197 tol=1.29 2024-07-11 19:19:08,488 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=71.2 pTM=0.488 ipTM=0.217 tol=0.838 2024-07-11 19:19:18,089 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=71.5 pTM=0.486 ipTM=0.212 tol=1.31 2024-07-11 19:19:27,685 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=71.1 pTM=0.486 ipTM=0.214 tol=1.05 2024-07-11 19:19:37,282 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=71.1 pTM=0.479 ipTM=0.199 tol=0.615 2024-07-11 19:19:46,891 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=71.1 pTM=0.492 ipTM=0.227 tol=0.808 2024-07-11 19:19:56,496 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=71 pTM=0.485 ipTM=0.213 tol=0.884 2024-07-11 19:20:06,096 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=70.9 pTM=0.49 ipTM=0.222 tol=0.903 2024-07-11 19:20:15,709 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=70.9 pTM=0.476 ipTM=0.191 tol=0.863 2024-07-11 19:20:25,303 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=71.2 pTM=0.487 ipTM=0.215 tol=0.741 2024-07-11 19:20:34,889 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=71.2 pTM=0.481 ipTM=0.203 tol=1.23 2024-07-11 19:20:44,485 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=71.3 pTM=0.487 ipTM=0.214 tol=1.13 2024-07-11 19:20:54,095 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=70.9 pTM=0.478 ipTM=0.196 tol=1.12 2024-07-11 19:21:03,689 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=71.1 pTM=0.489 ipTM=0.22 tol=1.01 2024-07-11 19:21:13,290 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=71.1 pTM=0.484 ipTM=0.208 tol=1.19 2024-07-11 19:21:22,887 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=71 pTM=0.491 ipTM=0.224 tol=0.985 2024-07-11 19:21:32,486 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=70.8 pTM=0.482 ipTM=0.205 tol=1.03 2024-07-11 19:21:42,081 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=71.2 pTM=0.5 ipTM=0.246 tol=0.814 2024-07-11 19:21:51,700 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=71.4 pTM=0.484 ipTM=0.208 tol=0.812 2024-07-11 19:21:51,700 alphafold2_multimer_v3_model_2_seed_000 took 297.7s (30 recycles) 2024-07-11 19:22:01,632 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=67.6 pTM=0.455 ipTM=0.167 2024-07-11 19:22:11,234 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=68 pTM=0.469 ipTM=0.193 tol=22.8 2024-07-11 19:22:20,830 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=67 pTM=0.466 ipTM=0.186 tol=3.64 2024-07-11 19:22:30,423 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=68.5 pTM=0.529 ipTM=0.322 tol=3.21 2024-07-11 19:22:40,031 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=67.5 pTM=0.483 ipTM=0.218 tol=2.35 2024-07-11 19:22:49,634 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=68.8 pTM=0.541 ipTM=0.348 tol=2.18 2024-07-11 19:22:59,246 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=67.9 pTM=0.476 ipTM=0.208 tol=3.29 2024-07-11 19:23:08,849 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=68.2 pTM=0.52 ipTM=0.308 tol=1.88 2024-07-11 19:23:18,460 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=67.6 pTM=0.475 ipTM=0.208 tol=2.55 2024-07-11 19:23:28,069 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=68.7 pTM=0.532 ipTM=0.333 tol=2.36 2024-07-11 19:23:37,694 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=67.8 pTM=0.487 ipTM=0.234 tol=2.35 2024-07-11 19:23:47,302 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=68.6 pTM=0.537 ipTM=0.342 tol=2.59 2024-07-11 19:23:56,927 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=67.7 pTM=0.487 ipTM=0.233 tol=6.39 2024-07-11 19:24:06,541 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=68.7 pTM=0.54 ipTM=0.349 tol=4.64 2024-07-11 19:24:16,166 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=67.8 pTM=0.488 ipTM=0.234 tol=2.79 2024-07-11 19:24:25,772 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=69 pTM=0.554 ipTM=0.376 tol=2.31 2024-07-11 19:24:35,390 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=68.2 pTM=0.494 ipTM=0.245 tol=2.3 2024-07-11 19:24:44,993 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=68.4 pTM=0.536 ipTM=0.339 tol=1.74 2024-07-11 19:24:54,619 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=68.4 pTM=0.49 ipTM=0.238 tol=2.49 2024-07-11 19:25:04,217 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=68.2 pTM=0.533 ipTM=0.332 tol=3.3 2024-07-11 19:25:13,836 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=68.1 pTM=0.484 ipTM=0.223 tol=1.82 2024-07-11 19:25:23,446 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=68 pTM=0.514 ipTM=0.288 tol=2.29 2024-07-11 19:25:33,065 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=68.1 pTM=0.485 ipTM=0.227 tol=2.27 2024-07-11 19:25:42,674 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.9 pTM=0.516 ipTM=0.293 tol=2.36 2024-07-11 19:25:52,299 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=68.2 pTM=0.488 ipTM=0.231 tol=2.89 2024-07-11 19:26:01,899 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=68.2 pTM=0.525 ipTM=0.313 tol=2.04 2024-07-11 19:26:11,519 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=68.3 pTM=0.488 ipTM=0.232 tol=2.47 2024-07-11 19:26:21,126 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.8 pTM=0.507 ipTM=0.275 tol=2.3 2024-07-11 19:26:30,742 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=68 pTM=0.485 ipTM=0.226 tol=1.69 2024-07-11 19:26:40,343 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.8 pTM=0.518 ipTM=0.301 tol=1.91 2024-07-11 19:26:49,963 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=68.4 pTM=0.49 ipTM=0.239 tol=2.56 2024-07-11 19:26:49,964 alphafold2_multimer_v3_model_3_seed_000 took 297.9s (30 recycles) 2024-07-11 19:26:59,916 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=70 pTM=0.467 ipTM=0.375 2024-07-11 19:27:09,552 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=68 pTM=0.47 ipTM=0.184 tol=21.1 2024-07-11 19:27:19,193 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=68.2 pTM=0.474 ipTM=0.198 tol=7.24 2024-07-11 19:27:28,830 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=69 pTM=0.491 ipTM=0.236 tol=5.42 2024-07-11 19:27:38,457 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=68.9 pTM=0.481 ipTM=0.213 tol=4.72 2024-07-11 19:27:48,091 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=68.9 pTM=0.487 ipTM=0.227 tol=2.79 2024-07-11 19:27:57,729 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=69.1 pTM=0.479 ipTM=0.208 tol=2.22 2024-07-11 19:28:07,366 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=68.8 pTM=0.491 ipTM=0.235 tol=1.76 2024-07-11 19:28:16,997 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=69.2 pTM=0.48 ipTM=0.211 tol=1.56 2024-07-11 19:28:26,632 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=69.3 pTM=0.504 ipTM=0.262 tol=2.34 2024-07-11 19:28:36,269 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=69.4 pTM=0.477 ipTM=0.204 tol=1.51 2024-07-11 19:28:45,905 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=69.2 pTM=0.499 ipTM=0.246 tol=1.73 2024-07-11 19:28:55,544 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=69.9 pTM=0.477 ipTM=0.202 tol=1.54 2024-07-11 19:29:05,181 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=69.5 pTM=0.5 ipTM=0.252 tol=1.14 2024-07-11 19:29:14,803 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=69.9 pTM=0.477 ipTM=0.203 tol=1.43 2024-07-11 19:29:24,433 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=69.2 pTM=0.5 ipTM=0.252 tol=1.51 2024-07-11 19:29:34,073 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.1 pTM=0.48 ipTM=0.21 tol=2.26 2024-07-11 19:29:43,708 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=69.3 pTM=0.5 ipTM=0.249 tol=1.73 2024-07-11 19:29:53,347 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=69.6 pTM=0.478 ipTM=0.206 tol=2.06 2024-07-11 19:30:02,980 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=69.4 pTM=0.499 ipTM=0.247 tol=2 2024-07-11 19:30:12,621 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=69.6 pTM=0.475 ipTM=0.195 tol=2.15 2024-07-11 19:30:22,256 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=69.6 pTM=0.499 ipTM=0.247 tol=1.95 2024-07-11 19:30:31,899 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=70.2 pTM=0.479 ipTM=0.206 tol=2.52 2024-07-11 19:30:41,542 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=69.2 pTM=0.494 ipTM=0.238 tol=2.22 2024-07-11 19:30:51,186 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=69.6 pTM=0.478 ipTM=0.201 tol=1.99 2024-07-11 19:31:00,824 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=69.6 pTM=0.502 ipTM=0.255 tol=1.76 2024-07-11 19:31:10,469 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.2 pTM=0.483 ipTM=0.216 tol=2.52 2024-07-11 19:31:20,110 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=68.9 pTM=0.494 ipTM=0.237 tol=1.63 2024-07-11 19:31:29,762 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=69.4 pTM=0.479 ipTM=0.204 tol=1.89 2024-07-11 19:31:39,393 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=69.3 pTM=0.505 ipTM=0.26 tol=1.39 2024-07-11 19:31:49,037 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70.2 pTM=0.483 ipTM=0.211 tol=1.18 2024-07-11 19:31:49,038 alphafold2_multimer_v3_model_4_seed_000 took 298.8s (30 recycles) 2024-07-11 19:31:58,970 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=67.2 pTM=0.459 ipTM=0.183 2024-07-11 19:32:08,593 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=68 pTM=0.458 ipTM=0.172 tol=2.54 2024-07-11 19:32:18,222 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=68.2 pTM=0.465 ipTM=0.19 tol=2.09 2024-07-11 19:32:27,838 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=68.7 pTM=0.459 ipTM=0.178 tol=2.04 2024-07-11 19:32:37,450 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=68.5 pTM=0.459 ipTM=0.179 tol=2.22 2024-07-11 19:32:47,064 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=68.5 pTM=0.46 ipTM=0.183 tol=2.09 2024-07-11 19:32:56,688 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=68.8 pTM=0.457 ipTM=0.173 tol=1.47 2024-07-11 19:33:06,295 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=68.6 pTM=0.458 ipTM=0.178 tol=1.95 2024-07-11 19:33:15,911 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=68.9 pTM=0.455 ipTM=0.171 tol=2.28 2024-07-11 19:33:25,531 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=68.8 pTM=0.458 ipTM=0.18 tol=2.26 2024-07-11 19:33:35,145 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=68.6 pTM=0.466 ipTM=0.214 tol=2.64 2024-07-11 19:33:44,774 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=69.2 pTM=0.474 ipTM=0.332 tol=3.24 2024-07-11 19:33:54,394 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=69.2 pTM=0.472 ipTM=0.307 tol=3.02 2024-07-11 19:34:04,013 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=69.3 pTM=0.471 ipTM=0.269 tol=3.05 2024-07-11 19:34:13,634 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=68.8 pTM=0.46 ipTM=0.18 tol=2.16 2024-07-11 19:34:23,260 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=69.1 pTM=0.459 ipTM=0.179 tol=2.73 2024-07-11 19:34:32,873 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=69 pTM=0.467 ipTM=0.237 tol=2.61 2024-07-11 19:34:42,495 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=69.2 pTM=0.47 ipTM=0.291 tol=2.92 2024-07-11 19:34:52,111 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=69 pTM=0.468 ipTM=0.235 tol=3.54 2024-07-11 19:35:01,726 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=68.9 pTM=0.469 ipTM=0.203 tol=3.2 2024-07-11 19:35:11,344 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=68.9 pTM=0.462 ipTM=0.185 tol=3 2024-07-11 19:35:20,961 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=69 pTM=0.467 ipTM=0.199 tol=2.3 2024-07-11 19:35:30,573 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=69 pTM=0.47 ipTM=0.286 tol=4.14 2024-07-11 19:35:40,198 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=69.3 pTM=0.473 ipTM=0.307 tol=4.42 2024-07-11 19:35:49,810 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=69.1 pTM=0.462 ipTM=0.186 tol=3.26 2024-07-11 19:35:59,425 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=69.1 pTM=0.463 ipTM=0.192 tol=3.07 2024-07-11 19:36:09,047 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=69.2 pTM=0.469 ipTM=0.283 tol=2.61 2024-07-11 19:36:18,661 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=69.1 pTM=0.473 ipTM=0.286 tol=2.43 2024-07-11 19:36:28,271 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68.9 pTM=0.465 ipTM=0.232 tol=3.32 2024-07-11 19:36:37,885 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=69.1 pTM=0.469 ipTM=0.27 tol=3.75 2024-07-11 19:36:47,507 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=69 pTM=0.47 ipTM=0.228 tol=4.03 2024-07-11 19:36:47,508 alphafold2_multimer_v3_model_5_seed_000 took 298.1s (30 recycles) 2024-07-11 19:36:47,832 reranking models by 'multimer' metric 2024-07-11 19:36:59,985 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-11 19:37:51,251 Relaxation took 63.4s 2024-07-11 19:37:51,251 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=68.4 pTM=0.49 ipTM=0.239 2024-07-11 19:38:18,222 Relaxation took 27.0s 2024-07-11 19:38:18,222 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=69 pTM=0.47 ipTM=0.228 2024-07-11 19:39:02,264 Relaxation took 44.0s 2024-07-11 19:39:02,264 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70.2 pTM=0.483 ipTM=0.211 2024-07-11 19:39:52,788 Relaxation took 50.5s 2024-07-11 19:39:52,788 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=71.4 pTM=0.484 ipTM=0.208 2024-07-11 19:40:50,735 Relaxation took 57.9s 2024-07-11 19:40:50,735 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=68.9 pTM=0.466 ipTM=0.189 2024-07-11 19:40:54,268 Done