2024-07-11 19:39:02,453 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 19:39:02,796 Running on GPU
2024-07-11 19:39:11,420 Found 6 citations for tools or databases
2024-07-11 19:39:11,420 Query 1/1: NRN1L_ARF1 (length 346)
2024-07-11 19:39:11,873 Sleeping for 8s. Reason: PENDING
2024-07-11 19:39:20,295 Sleeping for 9s. Reason: RUNNING
2024-07-11 19:39:29,694 Sleeping for 7s. Reason: RUNNING
2024-07-11 19:39:37,102 Sleeping for 6s. Reason: RUNNING
2024-07-11 19:39:43,502 Sleeping for 9s. Reason: RUNNING
2024-07-11 19:39:52,925 Sleeping for 8s. Reason: RUNNING
2024-07-11 19:40:01,335 Sleeping for 8s. Reason: RUNNING
2024-07-11 19:40:09,736 Sleeping for 7s. Reason: RUNNING
2024-07-11 19:40:18,886 Sleeping for 10s. Reason: PENDING
2024-07-11 19:40:29,297 Sleeping for 5s. Reason: RUNNING
2024-07-11 19:40:34,705 Sleeping for 8s. Reason: RUNNING
2024-07-11 19:40:43,118 Sleeping for 6s. Reason: RUNNING
2024-07-11 19:40:51,525 Setting max_seq=508, max_extra_seq=2048
2024-07-11 19:44:16,993 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=60.7 pTM=0.544 ipTM=0.202
2024-07-11 19:44:20,417 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=62.6 pTM=0.538 ipTM=0.149 tol=7.96
2024-07-11 19:44:23,826 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=61.1 pTM=0.528 ipTM=0.17 tol=6.94
2024-07-11 19:44:27,258 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=62.2 pTM=0.529 ipTM=0.161 tol=8.4
2024-07-11 19:44:30,663 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=58.4 pTM=0.514 ipTM=0.214 tol=10.1
2024-07-11 19:44:34,044 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=58.3 pTM=0.507 ipTM=0.173 tol=4.49
2024-07-11 19:44:37,419 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=61 pTM=0.55 ipTM=0.326 tol=3.58
2024-07-11 19:44:40,802 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.1 pTM=0.523 ipTM=0.238 tol=3.08
2024-07-11 19:44:44,184 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=58.8 pTM=0.506 ipTM=0.202 tol=3.27
2024-07-11 19:44:47,564 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.4 pTM=0.573 ipTM=0.372 tol=5.29
2024-07-11 19:44:50,944 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=61.7 pTM=0.542 ipTM=0.292 tol=3.97
2024-07-11 19:44:54,327 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=59.3 pTM=0.513 ipTM=0.214 tol=2.81
2024-07-11 19:44:57,708 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=59.8 pTM=0.527 ipTM=0.202 tol=10.4
2024-07-11 19:45:01,088 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=61.3 pTM=0.513 ipTM=0.166 tol=8.95
2024-07-11 19:45:04,461 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.2 pTM=0.505 ipTM=0.171 tol=3.93
2024-07-11 19:45:07,836 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=61.6 pTM=0.518 ipTM=0.169 tol=3.66
2024-07-11 19:45:11,217 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=58.3 pTM=0.493 ipTM=0.161 tol=3.64
2024-07-11 19:45:14,594 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=57.6 pTM=0.491 ipTM=0.15 tol=7.8
2024-07-11 19:45:17,970 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=59.4 pTM=0.494 ipTM=0.186 tol=8.96
2024-07-11 19:45:21,350 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=59.4 pTM=0.515 ipTM=0.209 tol=3.41
2024-07-11 19:45:24,730 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=63 pTM=0.548 ipTM=0.281 tol=3.21
2024-07-11 19:45:28,106 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=60.5 pTM=0.515 ipTM=0.21 tol=3.55
2024-07-11 19:45:31,481 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=63.3 pTM=0.543 ipTM=0.262 tol=1.79
2024-07-11 19:45:34,854 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=59.9 pTM=0.504 ipTM=0.181 tol=2.49
2024-07-11 19:45:38,226 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60.6 pTM=0.531 ipTM=0.254 tol=1.98
2024-07-11 19:45:41,600 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60 pTM=0.509 ipTM=0.169 tol=2.81
2024-07-11 19:45:44,982 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=62 pTM=0.539 ipTM=0.201 tol=4.05
2024-07-11 19:45:48,357 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=60.3 pTM=0.516 ipTM=0.197 tol=3.75
2024-07-11 19:45:51,736 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=65.1 pTM=0.573 ipTM=0.361 tol=3.14
2024-07-11 19:45:55,114 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=58.5 pTM=0.503 ipTM=0.188 tol=3.84
2024-07-11 19:45:58,494 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=61.1 pTM=0.529 ipTM=0.27 tol=4.98
2024-07-11 19:45:58,495 alphafold2_multimer_v3_model_1_seed_000 took 253.4s (30 recycles)
2024-07-11 19:46:01,989 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=60.1 pTM=0.521 ipTM=0.2
2024-07-11 19:46:05,390 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=59.6 pTM=0.511 ipTM=0.191 tol=9.88
2024-07-11 19:46:08,793 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=63.6 pTM=0.534 ipTM=0.15 tol=8.48
2024-07-11 19:46:12,191 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=64.1 pTM=0.524 ipTM=0.152 tol=6.95
2024-07-11 19:46:15,581 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=63.5 pTM=0.514 ipTM=0.153 tol=3.07
2024-07-11 19:46:18,977 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=64.6 pTM=0.524 ipTM=0.159 tol=5.59
2024-07-11 19:46:22,376 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=64.9 pTM=0.521 ipTM=0.145 tol=3.89
2024-07-11 19:46:25,771 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=64.4 pTM=0.522 ipTM=0.154 tol=3.88
2024-07-11 19:46:29,169 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=65.1 pTM=0.52 ipTM=0.137 tol=2.5
2024-07-11 19:46:32,564 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=65.7 pTM=0.53 ipTM=0.183 tol=7.41
2024-07-11 19:46:35,967 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=65.4 pTM=0.52 ipTM=0.134 tol=4.29
2024-07-11 19:46:39,364 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=64.9 pTM=0.526 ipTM=0.158 tol=8.05
2024-07-11 19:46:42,762 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=65.1 pTM=0.521 ipTM=0.162 tol=7.33
2024-07-11 19:46:46,157 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=65.6 pTM=0.529 ipTM=0.169 tol=4.57
2024-07-11 19:46:49,558 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=65.9 pTM=0.533 ipTM=0.179 tol=3.01
2024-07-11 19:46:52,953 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=64.8 pTM=0.521 ipTM=0.14 tol=2.4
2024-07-11 19:46:56,343 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=65.9 pTM=0.539 ipTM=0.223 tol=3.36
2024-07-11 19:46:59,739 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=65 pTM=0.517 ipTM=0.13 tol=4.8
2024-07-11 19:47:03,137 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64.4 pTM=0.523 ipTM=0.141 tol=11.1
2024-07-11 19:47:06,527 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=64.5 pTM=0.524 ipTM=0.16 tol=10.7
2024-07-11 19:47:09,922 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64.8 pTM=0.521 ipTM=0.157 tol=3.71
2024-07-11 19:47:13,322 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=65.8 pTM=0.533 ipTM=0.178 tol=4.38
2024-07-11 19:47:16,742 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=65.1 pTM=0.526 ipTM=0.149 tol=3.57
2024-07-11 19:47:20,181 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=65.4 pTM=0.527 ipTM=0.152 tol=3.89
2024-07-11 19:47:23,588 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=65.1 pTM=0.525 ipTM=0.141 tol=1.75
2024-07-11 19:47:26,988 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=64.9 pTM=0.525 ipTM=0.154 tol=2.21
2024-07-11 19:47:30,394 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=65.1 pTM=0.521 ipTM=0.143 tol=3.27
2024-07-11 19:47:33,790 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=64.8 pTM=0.528 ipTM=0.162 tol=3.02
2024-07-11 19:47:37,194 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65 pTM=0.521 ipTM=0.147 tol=2.13
2024-07-11 19:47:40,593 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=64.7 pTM=0.522 ipTM=0.156 tol=1.75
2024-07-11 19:47:44,003 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=65.6 pTM=0.524 ipTM=0.149 tol=3.21
2024-07-11 19:47:44,003 alphafold2_multimer_v3_model_2_seed_000 took 105.4s (30 recycles)
2024-07-11 19:47:47,505 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=58.8 pTM=0.522 ipTM=0.21
2024-07-11 19:47:50,906 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=60.5 pTM=0.526 ipTM=0.212 tol=8.27
2024-07-11 19:47:54,332 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=65.5 pTM=0.556 ipTM=0.305 tol=6.23
2024-07-11 19:47:57,758 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=65.4 pTM=0.547 ipTM=0.192 tol=6.01
2024-07-11 19:48:01,171 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=65.1 pTM=0.536 ipTM=0.199 tol=8.61
2024-07-11 19:48:04,594 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=65.7 pTM=0.545 ipTM=0.182 tol=4.37
2024-07-11 19:48:08,017 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=65.6 pTM=0.538 ipTM=0.182 tol=4.46
2024-07-11 19:48:11,439 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=65.3 pTM=0.546 ipTM=0.19 tol=5.01
2024-07-11 19:48:14,865 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=65.4 pTM=0.535 ipTM=0.166 tol=5.28
2024-07-11 19:48:18,283 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=65.1 pTM=0.554 ipTM=0.251 tol=4.5
2024-07-11 19:48:21,698 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=64.9 pTM=0.529 ipTM=0.153 tol=3.42
2024-07-11 19:48:25,111 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=64.5 pTM=0.548 ipTM=0.237 tol=2.77
2024-07-11 19:48:28,529 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=64.9 pTM=0.531 ipTM=0.159 tol=2.61
2024-07-11 19:48:31,938 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=64 pTM=0.539 ipTM=0.205 tol=2.88
2024-07-11 19:48:35,358 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=64.9 pTM=0.528 ipTM=0.149 tol=2.64
2024-07-11 19:48:38,779 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=64.8 pTM=0.552 ipTM=0.23 tol=2.86
2024-07-11 19:48:42,205 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=65.8 pTM=0.536 ipTM=0.165 tol=4.25
2024-07-11 19:48:45,630 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=65.3 pTM=0.543 ipTM=0.171 tol=3.22
2024-07-11 19:48:49,055 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=65.1 pTM=0.533 ipTM=0.153 tol=3.94
2024-07-11 19:48:52,476 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=65.6 pTM=0.544 ipTM=0.172 tol=3.62
2024-07-11 19:48:55,899 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=65.6 pTM=0.544 ipTM=0.187 tol=2.77
2024-07-11 19:48:59,319 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=66.4 pTM=0.552 ipTM=0.238 tol=4.51
2024-07-11 19:49:02,737 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=65.5 pTM=0.54 ipTM=0.191 tol=2.24
2024-07-11 19:49:06,152 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=66.2 pTM=0.554 ipTM=0.251 tol=2.12
2024-07-11 19:49:09,573 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=65.6 pTM=0.54 ipTM=0.18 tol=2.01
2024-07-11 19:49:12,985 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=65.6 pTM=0.559 ipTM=0.251 tol=2.64
2024-07-11 19:49:16,407 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=64.8 pTM=0.533 ipTM=0.153 tol=2.54
2024-07-11 19:49:19,819 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=64.8 pTM=0.55 ipTM=0.223 tol=6.32
2024-07-11 19:49:23,242 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=65.1 pTM=0.535 ipTM=0.16 tol=3.11
2024-07-11 19:49:26,666 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=64.8 pTM=0.553 ipTM=0.237 tol=4.58
2024-07-11 19:49:30,101 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=65 pTM=0.535 ipTM=0.167 tol=3.5
2024-07-11 19:49:30,101 alphafold2_multimer_v3_model_3_seed_000 took 106.0s (30 recycles)
2024-07-11 19:49:33,610 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=57.5 pTM=0.542 ipTM=0.272
2024-07-11 19:49:37,041 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=62.7 pTM=0.529 ipTM=0.155 tol=4
2024-07-11 19:49:40,464 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=63.5 pTM=0.539 ipTM=0.172 tol=4.56
2024-07-11 19:49:43,887 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=63.7 pTM=0.536 ipTM=0.149 tol=6.13
2024-07-11 19:49:47,303 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=63.8 pTM=0.547 ipTM=0.202 tol=4.18
2024-07-11 19:49:50,729 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=63.9 pTM=0.545 ipTM=0.168 tol=4.71
2024-07-11 19:49:54,152 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=63.4 pTM=0.552 ipTM=0.248 tol=6
2024-07-11 19:49:57,580 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=63.8 pTM=0.542 ipTM=0.168 tol=6.05
2024-07-11 19:50:01,019 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=63.4 pTM=0.553 ipTM=0.188 tol=6.43
2024-07-11 19:50:04,453 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=63.2 pTM=0.54 ipTM=0.157 tol=5.34
2024-07-11 19:50:07,884 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=63.1 pTM=0.552 ipTM=0.209 tol=2.37
2024-07-11 19:50:11,308 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=63.5 pTM=0.541 ipTM=0.168 tol=4.12
2024-07-11 19:50:14,735 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=63.4 pTM=0.553 ipTM=0.232 tol=5.9
2024-07-11 19:50:18,164 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=63.5 pTM=0.542 ipTM=0.152 tol=2.96
2024-07-11 19:50:21,586 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=62.9 pTM=0.553 ipTM=0.163 tol=6.01
2024-07-11 19:50:25,008 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64 pTM=0.554 ipTM=0.2 tol=5.7
2024-07-11 19:50:28,435 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=63.9 pTM=0.541 ipTM=0.149 tol=4.8
2024-07-11 19:50:31,857 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63.8 pTM=0.552 ipTM=0.169 tol=2.93
2024-07-11 19:50:35,282 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=63 pTM=0.542 ipTM=0.148 tol=2.19
2024-07-11 19:50:38,704 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=62.8 pTM=0.551 ipTM=0.159 tol=5.71
2024-07-11 19:50:42,129 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=63.7 pTM=0.556 ipTM=0.259 tol=4.26
2024-07-11 19:50:45,552 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=63.1 pTM=0.542 ipTM=0.153 tol=3.74
2024-07-11 19:50:48,976 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=62.8 pTM=0.551 ipTM=0.159 tol=4.74
2024-07-11 19:50:52,404 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=63.4 pTM=0.546 ipTM=0.181 tol=5.6
2024-07-11 19:50:55,826 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=63.4 pTM=0.553 ipTM=0.206 tol=6.09
2024-07-11 19:50:59,246 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=63.1 pTM=0.542 ipTM=0.168 tol=3.23
2024-07-11 19:51:02,666 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=63 pTM=0.55 ipTM=0.181 tol=4.08
2024-07-11 19:51:06,090 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=63.1 pTM=0.544 ipTM=0.161 tol=3.66
2024-07-11 19:51:09,505 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=63 pTM=0.549 ipTM=0.202 tol=4.15
2024-07-11 19:51:12,924 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=62.9 pTM=0.54 ipTM=0.141 tol=2.94
2024-07-11 19:51:16,345 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=62.8 pTM=0.549 ipTM=0.153 tol=3.65
2024-07-11 19:51:16,345 alphafold2_multimer_v3_model_4_seed_000 took 106.2s (30 recycles)
2024-07-11 19:51:19,846 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=59.2 pTM=0.522 ipTM=0.232
2024-07-11 19:51:23,249 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=57.9 pTM=0.499 ipTM=0.186 tol=7.43
2024-07-11 19:51:26,685 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=64 pTM=0.541 ipTM=0.186 tol=6.48
2024-07-11 19:51:30,120 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=64.6 pTM=0.541 ipTM=0.185 tol=6.01
2024-07-11 19:51:33,555 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65 pTM=0.542 ipTM=0.199 tol=6.61
2024-07-11 19:51:36,991 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.1 pTM=0.538 ipTM=0.186 tol=5.36
2024-07-11 19:51:40,417 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=66.1 pTM=0.564 ipTM=0.334 tol=4.95
2024-07-11 19:51:43,849 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=64.6 pTM=0.542 ipTM=0.208 tol=4.39
2024-07-11 19:51:47,280 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=65.7 pTM=0.551 ipTM=0.254 tol=5.14
2024-07-11 19:51:50,713 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=64.4 pTM=0.525 ipTM=0.155 tol=6.05
2024-07-11 19:51:54,142 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=66.6 pTM=0.575 ipTM=0.369 tol=5.66
2024-07-11 19:51:57,574 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=65.2 pTM=0.54 ipTM=0.206 tol=3.56
2024-07-11 19:52:01,003 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=65.4 pTM=0.55 ipTM=0.258 tol=3.81
2024-07-11 19:52:04,426 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=64.8 pTM=0.53 ipTM=0.169 tol=4.34
2024-07-11 19:52:07,855 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=65.5 pTM=0.541 ipTM=0.189 tol=5.24
2024-07-11 19:52:11,282 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=64.8 pTM=0.531 ipTM=0.156 tol=2.62
2024-07-11 19:52:14,706 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=66 pTM=0.568 ipTM=0.312 tol=2.29
2024-07-11 19:52:18,134 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=65.1 pTM=0.543 ipTM=0.207 tol=3.46
2024-07-11 19:52:21,554 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65.2 pTM=0.555 ipTM=0.278 tol=2.98
2024-07-11 19:52:24,983 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=64.5 pTM=0.542 ipTM=0.194 tol=2.62
2024-07-11 19:52:28,408 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=65.6 pTM=0.556 ipTM=0.292 tol=4.12
2024-07-11 19:52:31,841 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=64.4 pTM=0.538 ipTM=0.199 tol=3.19
2024-07-11 19:52:35,267 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=66.3 pTM=0.569 ipTM=0.359 tol=3.73
2024-07-11 19:52:38,698 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=64.6 pTM=0.531 ipTM=0.177 tol=4.32
2024-07-11 19:52:42,127 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=65.2 pTM=0.551 ipTM=0.231 tol=5.41
2024-07-11 19:52:45,557 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65 pTM=0.536 ipTM=0.181 tol=2.87
2024-07-11 19:52:48,984 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=65.4 pTM=0.558 ipTM=0.272 tol=2.18
2024-07-11 19:52:52,416 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=65.1 pTM=0.543 ipTM=0.21 tol=2.14
2024-07-11 19:52:55,841 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.4 pTM=0.546 ipTM=0.204 tol=4.36
2024-07-11 19:52:59,271 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=64.8 pTM=0.537 ipTM=0.178 tol=3.18
2024-07-11 19:53:02,702 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=66.5 pTM=0.562 ipTM=0.31 tol=4.35
2024-07-11 19:53:02,702 alphafold2_multimer_v3_model_5_seed_000 took 106.3s (30 recycles)
2024-07-11 19:53:02,792 reranking models by 'multimer' metric
2024-07-11 19:53:07,121 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 19:53:19,782 Relaxation took 17.0s
2024-07-11 19:53:19,783 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=66.5 pTM=0.562 ipTM=0.31
2024-07-11 19:53:30,921 Relaxation took 11.1s
2024-07-11 19:53:30,921 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=61.1 pTM=0.529 ipTM=0.27
2024-07-11 19:53:47,384 Relaxation took 16.5s
2024-07-11 19:53:47,384 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=65 pTM=0.535 ipTM=0.167
2024-07-11 19:53:58,972 Relaxation took 11.6s
2024-07-11 19:53:58,973 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=62.8 pTM=0.549 ipTM=0.153
2024-07-11 19:54:14,678 Relaxation took 15.7s
2024-07-11 19:54:14,678 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=65.6 pTM=0.524 ipTM=0.149
2024-07-11 19:54:15,535 Done