2024-07-11 19:42:36,965 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-11 19:42:37,280 Running on GPU 2024-07-11 19:42:49,463 Found 6 citations for tools or databases 2024-07-11 19:42:49,464 Query 1/1: NSA2_PPP5 (length 759) 2024-07-11 19:42:49,914 Sleeping for 6s. Reason: PENDING 2024-07-11 19:42:56,331 Sleeping for 8s. Reason: RUNNING 2024-07-11 19:43:04,746 Sleeping for 10s. Reason: RUNNING 2024-07-11 19:43:15,148 Sleeping for 10s. Reason: RUNNING 2024-07-11 19:43:25,561 Sleeping for 9s. Reason: RUNNING 2024-07-11 19:43:34,980 Sleeping for 5s. Reason: RUNNING 2024-07-11 19:43:40,386 Sleeping for 6s. Reason: RUNNING 2024-07-11 19:43:46,790 Sleeping for 9s. Reason: RUNNING 2024-07-11 19:43:56,200 Sleeping for 5s. Reason: RUNNING 2024-07-11 19:44:01,611 Sleeping for 5s. Reason: RUNNING 2024-07-11 19:44:07,010 Sleeping for 5s. Reason: RUNNING 2024-07-11 19:44:12,424 Sleeping for 7s. Reason: RUNNING 2024-07-11 19:44:19,837 Sleeping for 8s. Reason: RUNNING 2024-07-11 19:44:30,174 Sleeping for 9s. Reason: PENDING 2024-07-11 19:44:39,579 Sleeping for 6s. Reason: RUNNING 2024-07-11 19:44:45,983 Sleeping for 9s. Reason: RUNNING 2024-07-11 19:44:55,380 Sleeping for 6s. Reason: RUNNING 2024-07-11 19:45:01,777 Sleeping for 10s. Reason: RUNNING 2024-07-11 19:45:12,185 Sleeping for 8s. Reason: RUNNING 2024-07-11 19:45:20,585 Sleeping for 5s. Reason: RUNNING 2024-07-11 19:45:26,008 Sleeping for 9s. Reason: RUNNING 2024-07-11 19:45:39,618 Setting max_seq=508, max_extra_seq=2048 2024-07-11 19:49:16,668 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=76.3 pTM=0.618 ipTM=0.15 2024-07-11 19:49:28,179 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=76.5 pTM=0.601 ipTM=0.184 tol=5.12 2024-07-11 19:49:39,720 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=75.1 pTM=0.592 ipTM=0.176 tol=3.02 2024-07-11 19:49:51,250 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=76.3 pTM=0.604 ipTM=0.291 tol=6.03 2024-07-11 19:50:02,821 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=76.8 pTM=0.604 ipTM=0.24 tol=1.62 2024-07-11 19:50:14,394 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=75.2 pTM=0.59 ipTM=0.19 tol=2.17 2024-07-11 19:50:25,987 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=75.9 pTM=0.584 ipTM=0.182 tol=1.8 2024-07-11 19:50:37,574 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=75.5 pTM=0.578 ipTM=0.173 tol=1.3 2024-07-11 19:50:49,187 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=76 pTM=0.574 ipTM=0.167 tol=1.55 2024-07-11 19:51:00,813 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=75.4 pTM=0.575 ipTM=0.167 tol=1.5 2024-07-11 19:51:12,439 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=75.8 pTM=0.568 ipTM=0.163 tol=1.72 2024-07-11 19:51:24,078 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=75.6 pTM=0.57 ipTM=0.161 tol=1.42 2024-07-11 19:51:35,713 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=75.6 pTM=0.563 ipTM=0.171 tol=1.92 2024-07-11 19:51:47,356 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=75.2 pTM=0.563 ipTM=0.168 tol=1.52 2024-07-11 19:51:59,001 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=75.3 pTM=0.562 ipTM=0.167 tol=1.97 2024-07-11 19:52:10,640 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=77.3 pTM=0.579 ipTM=0.304 tol=3.68 2024-07-11 19:52:22,291 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=77.4 pTM=0.587 ipTM=0.255 tol=1.58 2024-07-11 19:52:33,944 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=75.8 pTM=0.578 ipTM=0.186 tol=2.09 2024-07-11 19:52:45,603 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=75.4 pTM=0.575 ipTM=0.174 tol=1.5 2024-07-11 19:52:57,252 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=77.6 pTM=0.583 ipTM=0.316 tol=2.67 2024-07-11 19:53:08,909 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=77.8 pTM=0.586 ipTM=0.262 tol=1.54 2024-07-11 19:53:20,570 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=76.5 pTM=0.579 ipTM=0.193 tol=1.95 2024-07-11 19:53:32,231 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=76.1 pTM=0.571 ipTM=0.197 tol=0.989 2024-07-11 19:53:43,899 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=77.3 pTM=0.573 ipTM=0.256 tol=1.67 2024-07-11 19:53:55,550 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=76.6 pTM=0.568 ipTM=0.2 tol=1.41 2024-07-11 19:54:07,220 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=75.5 pTM=0.568 ipTM=0.172 tol=2.16 2024-07-11 19:54:18,889 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=75.4 pTM=0.569 ipTM=0.168 tol=1.84 2024-07-11 19:54:30,543 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=77.5 pTM=0.583 ipTM=0.323 tol=3.32 2024-07-11 19:54:42,196 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=76.8 pTM=0.574 ipTM=0.24 tol=2.1 2024-07-11 19:54:53,856 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=75.2 pTM=0.565 ipTM=0.181 tol=2.48 2024-07-11 19:55:05,523 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=75.1 pTM=0.571 ipTM=0.174 tol=1.65 2024-07-11 19:55:05,524 alphafold2_multimer_v3_model_1_seed_000 took 512.4s (30 recycles) 2024-07-11 19:55:17,596 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=74.8 pTM=0.56 ipTM=0.151 2024-07-11 19:55:29,298 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=76.1 pTM=0.568 ipTM=0.154 tol=3.49 2024-07-11 19:55:41,011 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=75.6 pTM=0.574 ipTM=0.156 tol=4.52 2024-07-11 19:55:52,723 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=75.6 pTM=0.578 ipTM=0.146 tol=5.43 2024-07-11 19:56:04,430 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=76.2 pTM=0.582 ipTM=0.161 tol=4.44 2024-07-11 19:56:16,146 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=76.9 pTM=0.585 ipTM=0.164 tol=3.45 2024-07-11 19:56:27,843 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=78.6 pTM=0.591 ipTM=0.285 tol=3.75 2024-07-11 19:56:39,544 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=78.4 pTM=0.6 ipTM=0.228 tol=2.28 2024-07-11 19:56:51,250 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=77.9 pTM=0.588 ipTM=0.177 tol=2.28 2024-07-11 19:57:02,940 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=77.7 pTM=0.584 ipTM=0.203 tol=3.01 2024-07-11 19:57:14,629 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=77.9 pTM=0.584 ipTM=0.202 tol=0.943 2024-07-11 19:57:26,317 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=78 pTM=0.586 ipTM=0.222 tol=1.07 2024-07-11 19:57:38,005 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=77.6 pTM=0.582 ipTM=0.2 tol=0.912 2024-07-11 19:57:49,683 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=77.8 pTM=0.575 ipTM=0.21 tol=1.35 2024-07-11 19:58:01,377 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=77.6 pTM=0.566 ipTM=0.172 tol=3.34 2024-07-11 19:58:13,054 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=78.4 pTM=0.575 ipTM=0.263 tol=3.98 2024-07-11 19:58:24,739 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=78.6 pTM=0.58 ipTM=0.246 tol=1.8 2024-07-11 19:58:36,423 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=77.8 pTM=0.569 ipTM=0.182 tol=3.84 2024-07-11 19:58:48,100 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=77.6 pTM=0.567 ipTM=0.178 tol=2.29 2024-07-11 19:58:59,789 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=77.7 pTM=0.561 ipTM=0.182 tol=1.39 2024-07-11 19:59:11,476 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=78 pTM=0.57 ipTM=0.204 tol=1.68 2024-07-11 19:59:23,184 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=77.9 pTM=0.566 ipTM=0.174 tol=3.27 2024-07-11 19:59:34,873 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=78.2 pTM=0.562 ipTM=0.191 tol=3.37 2024-07-11 19:59:46,578 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=78.2 pTM=0.562 ipTM=0.189 tol=3.17 2024-07-11 19:59:58,262 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=78 pTM=0.566 ipTM=0.192 tol=2.6 2024-07-11 20:00:09,957 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=78 pTM=0.566 ipTM=0.178 tol=4.81 2024-07-11 20:00:21,653 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=78.4 pTM=0.569 ipTM=0.207 tol=5.88 2024-07-11 20:00:33,337 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=78.6 pTM=0.573 ipTM=0.253 tol=1.39 2024-07-11 20:00:45,014 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=77.9 pTM=0.564 ipTM=0.193 tol=2.54 2024-07-11 20:00:56,704 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=77.4 pTM=0.556 ipTM=0.176 tol=2.98 2024-07-11 20:01:08,385 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=78.1 pTM=0.566 ipTM=0.203 tol=2.21 2024-07-11 20:01:08,386 alphafold2_multimer_v3_model_2_seed_000 took 362.5s (30 recycles) 2024-07-11 20:01:20,468 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=76.4 pTM=0.594 ipTM=0.148 2024-07-11 20:01:32,178 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=77.3 pTM=0.576 ipTM=0.156 tol=3.4 2024-07-11 20:01:43,879 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=77.3 pTM=0.588 ipTM=0.152 tol=2.75 2024-07-11 20:01:55,580 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=77.1 pTM=0.585 ipTM=0.15 tol=1.28 2024-07-11 20:02:07,271 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=77.1 pTM=0.585 ipTM=0.145 tol=1.53 2024-07-11 20:02:18,962 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=77 pTM=0.581 ipTM=0.148 tol=1.04 2024-07-11 20:02:30,646 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=76.8 pTM=0.58 ipTM=0.149 tol=1 2024-07-11 20:02:42,344 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=76.9 pTM=0.583 ipTM=0.149 tol=0.677 2024-07-11 20:02:54,024 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=77.1 pTM=0.58 ipTM=0.143 tol=1.26 2024-07-11 20:03:05,693 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=76.9 pTM=0.584 ipTM=0.15 tol=2.24 2024-07-11 20:03:17,384 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=77.1 pTM=0.579 ipTM=0.146 tol=1.55 2024-07-11 20:03:29,061 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=77.1 pTM=0.581 ipTM=0.148 tol=1.96 2024-07-11 20:03:40,732 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=77 pTM=0.577 ipTM=0.143 tol=2.53 2024-07-11 20:03:52,414 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=76.9 pTM=0.578 ipTM=0.152 tol=2.24 2024-07-11 20:04:04,102 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=76.9 pTM=0.571 ipTM=0.145 tol=2.93 2024-07-11 20:04:15,777 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=76.8 pTM=0.578 ipTM=0.15 tol=2.7 2024-07-11 20:04:27,469 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=77.3 pTM=0.575 ipTM=0.143 tol=3.51 2024-07-11 20:04:39,146 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=76.9 pTM=0.578 ipTM=0.15 tol=2.61 2024-07-11 20:04:50,820 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=77.2 pTM=0.575 ipTM=0.146 tol=1.75 2024-07-11 20:05:02,502 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=76.9 pTM=0.579 ipTM=0.154 tol=3.62 2024-07-11 20:05:14,186 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=76.9 pTM=0.572 ipTM=0.147 tol=2.41 2024-07-11 20:05:25,868 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=77 pTM=0.58 ipTM=0.152 tol=2.81 2024-07-11 20:05:37,559 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=77.2 pTM=0.575 ipTM=0.149 tol=2.79 2024-07-11 20:05:49,238 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=76.7 pTM=0.575 ipTM=0.15 tol=1.79 2024-07-11 20:06:00,930 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=77.1 pTM=0.574 ipTM=0.145 tol=3.61 2024-07-11 20:06:12,621 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=76.8 pTM=0.574 ipTM=0.15 tol=2.95 2024-07-11 20:06:24,319 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=77 pTM=0.574 ipTM=0.146 tol=2 2024-07-11 20:06:36,003 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=76.8 pTM=0.576 ipTM=0.15 tol=2.56 2024-07-11 20:06:47,695 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=77.1 pTM=0.571 ipTM=0.145 tol=2.63 2024-07-11 20:06:59,377 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=76.9 pTM=0.573 ipTM=0.15 tol=2.21 2024-07-11 20:07:11,071 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=77.2 pTM=0.577 ipTM=0.147 tol=2.38 2024-07-11 20:07:11,071 alphafold2_multimer_v3_model_3_seed_000 took 362.3s (30 recycles) 2024-07-11 20:07:23,159 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=74.6 pTM=0.573 ipTM=0.165 2024-07-11 20:07:34,866 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=74.2 pTM=0.564 ipTM=0.172 tol=6.02 2024-07-11 20:07:46,582 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=73.6 pTM=0.547 ipTM=0.157 tol=4.09 2024-07-11 20:07:58,289 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=73.3 pTM=0.557 ipTM=0.164 tol=1.41 2024-07-11 20:08:10,009 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=73.9 pTM=0.55 ipTM=0.156 tol=1.12 2024-07-11 20:08:21,728 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=73.6 pTM=0.552 ipTM=0.162 tol=0.842 2024-07-11 20:08:33,448 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=73.6 pTM=0.549 ipTM=0.163 tol=0.663 2024-07-11 20:08:45,167 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=73.4 pTM=0.546 ipTM=0.165 tol=1.24 2024-07-11 20:08:56,891 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=73.4 pTM=0.549 ipTM=0.165 tol=1.24 2024-07-11 20:09:08,607 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=73.3 pTM=0.544 ipTM=0.165 tol=0.759 2024-07-11 20:09:20,330 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=73.5 pTM=0.545 ipTM=0.166 tol=1.01 2024-07-11 20:09:32,055 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=73.6 pTM=0.547 ipTM=0.165 tol=2.23 2024-07-11 20:09:43,779 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=74.1 pTM=0.542 ipTM=0.172 tol=8.57 2024-07-11 20:09:55,505 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=73.9 pTM=0.543 ipTM=0.175 tol=8.95 2024-07-11 20:10:07,232 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=73.2 pTM=0.541 ipTM=0.165 tol=2.61 2024-07-11 20:10:18,942 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=73.4 pTM=0.543 ipTM=0.171 tol=1.74 2024-07-11 20:10:30,672 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=73.5 pTM=0.544 ipTM=0.161 tol=1.37 2024-07-11 20:10:42,389 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=73.5 pTM=0.544 ipTM=0.168 tol=2.3 2024-07-11 20:10:54,117 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=73.6 pTM=0.546 ipTM=0.165 tol=2.11 2024-07-11 20:11:05,845 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=73.6 pTM=0.548 ipTM=0.173 tol=1.93 2024-07-11 20:11:17,570 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=74.5 pTM=0.541 ipTM=0.171 tol=9.83 2024-07-11 20:11:29,305 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=73.9 pTM=0.545 ipTM=0.169 tol=5.84 2024-07-11 20:11:41,043 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=73.8 pTM=0.543 ipTM=0.16 tol=3.08 2024-07-11 20:11:52,773 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=74 pTM=0.542 ipTM=0.161 tol=7.07 2024-07-11 20:12:04,513 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=74.4 pTM=0.545 ipTM=0.175 tol=1.66 2024-07-11 20:12:16,254 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=74.1 pTM=0.539 ipTM=0.165 tol=2.31 2024-07-11 20:12:27,980 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=73.8 pTM=0.551 ipTM=0.175 tol=7.17 2024-07-11 20:12:39,713 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=73.8 pTM=0.544 ipTM=0.168 tol=2.97 2024-07-11 20:12:51,438 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=73.2 pTM=0.546 ipTM=0.173 tol=2.92 2024-07-11 20:13:03,163 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=73.2 pTM=0.542 ipTM=0.17 tol=2.02 2024-07-11 20:13:14,887 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=73.4 pTM=0.546 ipTM=0.166 tol=1.34 2024-07-11 20:13:14,888 alphafold2_multimer_v3_model_4_seed_000 took 363.4s (30 recycles) 2024-07-11 20:13:26,979 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=73.8 pTM=0.559 ipTM=0.144 2024-07-11 20:13:38,713 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=75.2 pTM=0.564 ipTM=0.145 tol=3.88 2024-07-11 20:13:50,451 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=75.7 pTM=0.576 ipTM=0.143 tol=3.13 2024-07-11 20:14:02,180 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=76.1 pTM=0.579 ipTM=0.146 tol=2.11 2024-07-11 20:14:13,912 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=76.4 pTM=0.58 ipTM=0.145 tol=1.84 2024-07-11 20:14:25,645 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=76.4 pTM=0.576 ipTM=0.145 tol=1.81 2024-07-11 20:14:37,390 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=76.1 pTM=0.572 ipTM=0.144 tol=1.34 2024-07-11 20:14:49,131 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=76.2 pTM=0.571 ipTM=0.145 tol=1.04 2024-07-11 20:15:00,874 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=76.3 pTM=0.572 ipTM=0.144 tol=1.11 2024-07-11 20:15:12,614 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=76.2 pTM=0.571 ipTM=0.143 tol=1.38 2024-07-11 20:15:24,351 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=76.2 pTM=0.566 ipTM=0.144 tol=1.08 2024-07-11 20:15:36,088 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=76.6 pTM=0.575 ipTM=0.146 tol=1.51 2024-07-11 20:15:47,819 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=76.1 pTM=0.569 ipTM=0.147 tol=0.861 2024-07-11 20:15:59,553 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=76.2 pTM=0.566 ipTM=0.146 tol=1.14 2024-07-11 20:16:11,283 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=76.3 pTM=0.566 ipTM=0.147 tol=1.32 2024-07-11 20:16:23,023 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=76.3 pTM=0.568 ipTM=0.146 tol=1.47 2024-07-11 20:16:34,740 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=76.4 pTM=0.574 ipTM=0.149 tol=1.38 2024-07-11 20:16:46,480 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=76.4 pTM=0.575 ipTM=0.148 tol=1.4 2024-07-11 20:16:58,222 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=76.5 pTM=0.575 ipTM=0.147 tol=1.75 2024-07-11 20:17:09,961 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=76.6 pTM=0.572 ipTM=0.148 tol=0.924 2024-07-11 20:17:21,698 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=76.4 pTM=0.568 ipTM=0.145 tol=1.44 2024-07-11 20:17:33,421 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=76.6 pTM=0.575 ipTM=0.148 tol=1.96 2024-07-11 20:17:45,156 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=76.4 pTM=0.578 ipTM=0.148 tol=1.57 2024-07-11 20:17:56,907 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=76.4 pTM=0.575 ipTM=0.143 tol=1.82 2024-07-11 20:18:08,634 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=76.3 pTM=0.572 ipTM=0.149 tol=1.68 2024-07-11 20:18:20,373 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=76.2 pTM=0.573 ipTM=0.146 tol=1.38 2024-07-11 20:18:32,097 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=76.4 pTM=0.573 ipTM=0.147 tol=1.15 2024-07-11 20:18:43,835 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=76.3 pTM=0.572 ipTM=0.146 tol=0.976 2024-07-11 20:18:55,574 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=76.1 pTM=0.565 ipTM=0.146 tol=0.957 2024-07-11 20:19:07,308 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=76.2 pTM=0.568 ipTM=0.146 tol=2.12 2024-07-11 20:19:19,044 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=76.2 pTM=0.573 ipTM=0.148 tol=1.9 2024-07-11 20:19:19,045 alphafold2_multimer_v3_model_5_seed_000 took 363.8s (30 recycles) 2024-07-11 20:19:19,414 reranking models by 'multimer' metric 2024-07-11 20:19:31,458 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-11 20:20:10,057 Relaxation took 50.6s 2024-07-11 20:20:10,057 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=78.1 pTM=0.566 ipTM=0.203 2024-07-11 20:21:10,074 Relaxation took 60.0s 2024-07-11 20:21:10,074 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=75.1 pTM=0.571 ipTM=0.174 2024-07-11 20:22:28,681 Relaxation took 78.6s 2024-07-11 20:22:28,681 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=73.4 pTM=0.546 ipTM=0.166 2024-07-11 20:23:46,871 Relaxation took 78.2s 2024-07-11 20:23:46,871 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=77.2 pTM=0.577 ipTM=0.147 2024-07-11 20:24:43,133 Relaxation took 56.3s 2024-07-11 20:24:43,134 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=76.2 pTM=0.573 ipTM=0.148 2024-07-11 20:24:44,494 Done