2024-07-11 19:51:58,283 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 19:51:58,605 Running on GPU
2024-07-11 19:52:07,563 Found 6 citations for tools or databases
2024-07-11 19:52:07,563 Query 1/1: NSN5C_NACP4 (length 528)
2024-07-11 19:52:08,034 Sleeping for 10s. Reason: PENDING
2024-07-11 19:52:18,460 Sleeping for 8s. Reason: RUNNING
2024-07-11 19:52:26,866 Sleeping for 10s. Reason: RUNNING
2024-07-11 19:52:37,277 Sleeping for 8s. Reason: RUNNING
2024-07-11 19:52:45,690 Sleeping for 5s. Reason: RUNNING
2024-07-11 19:52:51,096 Sleeping for 5s. Reason: RUNNING
2024-07-11 19:52:56,497 Sleeping for 10s. Reason: RUNNING
2024-07-11 19:53:08,513 Sleeping for 8s. Reason: PENDING
2024-07-11 19:53:16,928 Sleeping for 9s. Reason: RUNNING
2024-07-11 19:53:26,338 Sleeping for 9s. Reason: RUNNING
2024-07-11 19:53:37,041 Sleeping for 6s. Reason: RUNNING
2024-07-11 19:53:45,498 Setting max_seq=508, max_extra_seq=2048
2024-07-11 19:56:22,633 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=51.8 pTM=0.506 ipTM=0.183
2024-07-11 19:56:28,247 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=50.8 pTM=0.506 ipTM=0.186 tol=9.36
2024-07-11 19:56:33,874 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=50.6 pTM=0.508 ipTM=0.185 tol=4.65
2024-07-11 19:56:39,496 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=51 pTM=0.504 ipTM=0.189 tol=3.52
2024-07-11 19:56:45,118 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=51.6 pTM=0.505 ipTM=0.19 tol=3.28
2024-07-11 19:56:50,742 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=50.7 pTM=0.5 ipTM=0.182 tol=2.31
2024-07-11 19:56:56,360 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=50.6 pTM=0.499 ipTM=0.181 tol=1.82
2024-07-11 19:57:01,978 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=51.1 pTM=0.495 ipTM=0.184 tol=2.6
2024-07-11 19:57:07,599 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=51 pTM=0.497 ipTM=0.182 tol=2.53
2024-07-11 19:57:13,216 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=49.5 pTM=0.49 ipTM=0.177 tol=1.88
2024-07-11 19:57:18,842 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=50.1 pTM=0.493 ipTM=0.181 tol=1.73
2024-07-11 19:57:24,465 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=49.8 pTM=0.487 ipTM=0.183 tol=1.93
2024-07-11 19:57:30,085 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=50 pTM=0.489 ipTM=0.189 tol=1.99
2024-07-11 19:57:35,703 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=48.8 pTM=0.486 ipTM=0.189 tol=1.96
2024-07-11 19:57:41,325 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=49.3 pTM=0.488 ipTM=0.19 tol=2.23
2024-07-11 19:57:46,955 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=49.3 pTM=0.488 ipTM=0.19 tol=1.29
2024-07-11 19:57:52,588 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=48.8 pTM=0.49 ipTM=0.189 tol=2.71
2024-07-11 19:57:58,211 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=48.2 pTM=0.489 ipTM=0.194 tol=3.43
2024-07-11 19:58:03,836 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=49.1 pTM=0.486 ipTM=0.19 tol=3.35
2024-07-11 19:58:09,463 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=49 pTM=0.486 ipTM=0.19 tol=2.66
2024-07-11 19:58:15,086 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=49.2 pTM=0.489 ipTM=0.194 tol=1.38
2024-07-11 19:58:20,712 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=48.8 pTM=0.485 ipTM=0.192 tol=1.74
2024-07-11 19:58:26,347 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=48.5 pTM=0.491 ipTM=0.198 tol=1.72
2024-07-11 19:58:31,975 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=48.6 pTM=0.483 ipTM=0.186 tol=1.66
2024-07-11 19:58:37,610 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=49.5 pTM=0.49 ipTM=0.194 tol=1.26
2024-07-11 19:58:43,237 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=48.7 pTM=0.483 ipTM=0.186 tol=1.23
2024-07-11 19:58:48,862 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=49.4 pTM=0.487 ipTM=0.191 tol=1.6
2024-07-11 19:58:54,493 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=49.2 pTM=0.484 ipTM=0.184 tol=2.69
2024-07-11 19:59:00,131 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=49.3 pTM=0.489 ipTM=0.189 tol=1.87
2024-07-11 19:59:05,768 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=48.7 pTM=0.484 ipTM=0.184 tol=3.54
2024-07-11 19:59:11,406 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=49.4 pTM=0.487 ipTM=0.189 tol=3.8
2024-07-11 19:59:11,407 alphafold2_multimer_v3_model_1_seed_000 took 284.2s (30 recycles)
2024-07-11 19:59:17,245 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=52.6 pTM=0.492 ipTM=0.164
2024-07-11 19:59:22,878 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=51.2 pTM=0.485 ipTM=0.183 tol=8.48
2024-07-11 19:59:28,509 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=51.4 pTM=0.484 ipTM=0.176 tol=4.42
2024-07-11 19:59:34,141 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=51.3 pTM=0.483 ipTM=0.161 tol=2.34
2024-07-11 19:59:39,775 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=51.3 pTM=0.483 ipTM=0.163 tol=3.78
2024-07-11 19:59:45,408 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=51.6 pTM=0.482 ipTM=0.162 tol=1.69
2024-07-11 19:59:51,040 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=51.6 pTM=0.484 ipTM=0.176 tol=1.13
2024-07-11 19:59:56,667 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=51.4 pTM=0.482 ipTM=0.166 tol=1.05
2024-07-11 20:00:02,296 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=51.1 pTM=0.481 ipTM=0.164 tol=1.67
2024-07-11 20:00:07,928 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=51.1 pTM=0.478 ipTM=0.161 tol=1.85
2024-07-11 20:00:13,564 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=51.6 pTM=0.481 ipTM=0.164 tol=1.86
2024-07-11 20:00:19,192 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=51.2 pTM=0.475 ipTM=0.16 tol=1.15
2024-07-11 20:00:24,824 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=51.3 pTM=0.477 ipTM=0.163 tol=1.45
2024-07-11 20:00:30,451 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=51 pTM=0.477 ipTM=0.166 tol=1.18
2024-07-11 20:00:36,078 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=51.1 pTM=0.479 ipTM=0.172 tol=1.03
2024-07-11 20:00:41,704 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=50.9 pTM=0.475 ipTM=0.164 tol=1.46
2024-07-11 20:00:47,336 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=51.3 pTM=0.478 ipTM=0.161 tol=1.14
2024-07-11 20:00:52,963 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=50.9 pTM=0.475 ipTM=0.164 tol=0.961
2024-07-11 20:00:58,594 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=51.2 pTM=0.478 ipTM=0.166 tol=1.01
2024-07-11 20:01:04,222 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=51.1 pTM=0.475 ipTM=0.162 tol=0.901
2024-07-11 20:01:09,852 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=51.4 pTM=0.477 ipTM=0.162 tol=0.967
2024-07-11 20:01:15,480 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=51.2 pTM=0.475 ipTM=0.161 tol=1.35
2024-07-11 20:01:21,112 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=51.3 pTM=0.475 ipTM=0.158 tol=0.94
2024-07-11 20:01:26,738 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=51.4 pTM=0.472 ipTM=0.151 tol=0.931
2024-07-11 20:01:32,371 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=51.4 pTM=0.478 ipTM=0.161 tol=0.873
2024-07-11 20:01:37,999 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=51.1 pTM=0.476 ipTM=0.16 tol=1.14
2024-07-11 20:01:43,631 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=51.5 pTM=0.477 ipTM=0.16 tol=1.07
2024-07-11 20:01:49,261 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=51.3 pTM=0.477 ipTM=0.164 tol=1.34
2024-07-11 20:01:54,895 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=51.2 pTM=0.479 ipTM=0.165 tol=1.38
2024-07-11 20:02:00,525 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=51 pTM=0.477 ipTM=0.162 tol=1.26
2024-07-11 20:02:06,155 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=51.1 pTM=0.476 ipTM=0.158 tol=1.07
2024-07-11 20:02:06,155 alphafold2_multimer_v3_model_2_seed_000 took 174.6s (30 recycles)
2024-07-11 20:02:12,032 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=54.8 pTM=0.512 ipTM=0.191
2024-07-11 20:02:17,720 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=54.5 pTM=0.515 ipTM=0.19 tol=13.2
2024-07-11 20:02:23,413 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=55.3 pTM=0.522 ipTM=0.2 tol=6.67
2024-07-11 20:02:29,099 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=55.5 pTM=0.524 ipTM=0.209 tol=5.45
2024-07-11 20:02:34,783 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=56.3 pTM=0.532 ipTM=0.226 tol=1.44
2024-07-11 20:02:40,467 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=56.3 pTM=0.531 ipTM=0.222 tol=3.01
2024-07-11 20:02:46,158 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=56.2 pTM=0.526 ipTM=0.21 tol=3
2024-07-11 20:02:51,837 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=56 pTM=0.531 ipTM=0.22 tol=2.5
2024-07-11 20:02:57,535 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=56.5 pTM=0.529 ipTM=0.213 tol=2.23
2024-07-11 20:03:03,220 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=55.9 pTM=0.531 ipTM=0.219 tol=2.21
2024-07-11 20:03:08,901 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=56.8 pTM=0.533 ipTM=0.224 tol=2.31
2024-07-11 20:03:14,573 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=56.1 pTM=0.53 ipTM=0.219 tol=2.01
2024-07-11 20:03:20,251 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=56.6 pTM=0.535 ipTM=0.232 tol=2.09
2024-07-11 20:03:25,930 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=55.7 pTM=0.529 ipTM=0.22 tol=2.51
2024-07-11 20:03:31,613 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=56.4 pTM=0.532 ipTM=0.223 tol=2.09
2024-07-11 20:03:37,291 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=56.1 pTM=0.53 ipTM=0.228 tol=1.92
2024-07-11 20:03:42,985 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=56.9 pTM=0.542 ipTM=0.239 tol=2.14
2024-07-11 20:03:48,667 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=56.7 pTM=0.533 ipTM=0.227 tol=1.69
2024-07-11 20:03:54,361 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=56.4 pTM=0.529 ipTM=0.215 tol=3.17
2024-07-11 20:04:00,044 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=56.6 pTM=0.534 ipTM=0.23 tol=1.96
2024-07-11 20:04:05,721 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=57.3 pTM=0.543 ipTM=0.265 tol=2.25
2024-07-11 20:04:11,406 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=57.5 pTM=0.546 ipTM=0.343 tol=1.81
2024-07-11 20:04:17,104 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=60.1 pTM=0.573 ipTM=0.524 tol=3.06
2024-07-11 20:04:22,782 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=60.1 pTM=0.566 ipTM=0.571 tol=1.52
2024-07-11 20:04:28,470 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.3 pTM=0.586 ipTM=0.603 tol=1.94
2024-07-11 20:04:34,144 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=59.8 pTM=0.564 ipTM=0.583 tol=3.35
2024-07-11 20:04:39,829 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=60.9 pTM=0.584 ipTM=0.605 tol=3.77
2024-07-11 20:04:45,502 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=60.5 pTM=0.572 ipTM=0.613 tol=2.39
2024-07-11 20:04:51,193 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=60.6 pTM=0.58 ipTM=0.608 tol=1.78
2024-07-11 20:04:56,875 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=60.1 pTM=0.57 ipTM=0.584 tol=2.68
2024-07-11 20:05:02,549 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.9 pTM=0.588 ipTM=0.612 tol=2.54
2024-07-11 20:05:02,549 alphafold2_multimer_v3_model_3_seed_000 took 176.2s (30 recycles)
2024-07-11 20:05:08,430 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=53.8 pTM=0.521 ipTM=0.207
2024-07-11 20:05:14,117 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=53.7 pTM=0.53 ipTM=0.235 tol=7.62
2024-07-11 20:05:19,788 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=53.6 pTM=0.53 ipTM=0.22 tol=3.56
2024-07-11 20:05:25,474 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=54.1 pTM=0.527 ipTM=0.203 tol=3.77
2024-07-11 20:05:31,152 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=53.6 pTM=0.526 ipTM=0.208 tol=2.08
2024-07-11 20:05:36,826 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=54.7 pTM=0.539 ipTM=0.218 tol=7.35
2024-07-11 20:05:42,499 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=54 pTM=0.533 ipTM=0.22 tol=2.94
2024-07-11 20:05:48,175 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=54.8 pTM=0.534 ipTM=0.221 tol=7.82
2024-07-11 20:05:53,861 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=54.8 pTM=0.538 ipTM=0.233 tol=2.91
2024-07-11 20:05:59,533 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=55.6 pTM=0.537 ipTM=0.225 tol=7.9
2024-07-11 20:06:05,202 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=54.8 pTM=0.538 ipTM=0.233 tol=3.3
2024-07-11 20:06:10,871 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=55.7 pTM=0.54 ipTM=0.234 tol=3.06
2024-07-11 20:06:16,555 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=54.6 pTM=0.538 ipTM=0.232 tol=1.91
2024-07-11 20:06:22,237 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=55.2 pTM=0.54 ipTM=0.235 tol=3.47
2024-07-11 20:06:27,913 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=55.2 pTM=0.544 ipTM=0.243 tol=3.87
2024-07-11 20:06:33,591 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=55.1 pTM=0.536 ipTM=0.222 tol=4.15
2024-07-11 20:06:39,277 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=54.7 pTM=0.539 ipTM=0.234 tol=2.86
2024-07-11 20:06:44,957 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=55.7 pTM=0.538 ipTM=0.224 tol=6.25
2024-07-11 20:06:50,628 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=54.6 pTM=0.533 ipTM=0.219 tol=7.02
2024-07-11 20:06:56,304 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=55.3 pTM=0.533 ipTM=0.214 tol=10.7
2024-07-11 20:07:01,980 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=54.1 pTM=0.532 ipTM=0.223 tol=5.25
2024-07-11 20:07:07,650 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=55.3 pTM=0.538 ipTM=0.224 tol=2.23
2024-07-11 20:07:13,331 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=54.9 pTM=0.539 ipTM=0.234 tol=4.5
2024-07-11 20:07:19,010 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=55.6 pTM=0.537 ipTM=0.223 tol=7.25
2024-07-11 20:07:24,687 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=55.4 pTM=0.541 ipTM=0.237 tol=5.32
2024-07-11 20:07:30,356 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=55.3 pTM=0.537 ipTM=0.226 tol=5.08
2024-07-11 20:07:36,016 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=54.8 pTM=0.54 ipTM=0.238 tol=6.68
2024-07-11 20:07:41,689 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=55.5 pTM=0.535 ipTM=0.216 tol=7.25
2024-07-11 20:07:47,356 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=54.5 pTM=0.538 ipTM=0.254 tol=5.21
2024-07-11 20:07:53,045 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=55.1 pTM=0.536 ipTM=0.225 tol=5.8
2024-07-11 20:07:58,730 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=55.4 pTM=0.544 ipTM=0.245 tol=4.22
2024-07-11 20:07:58,730 alphafold2_multimer_v3_model_4_seed_000 took 176.0s (30 recycles)
2024-07-11 20:08:04,594 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=52.3 pTM=0.499 ipTM=0.188
2024-07-11 20:08:10,265 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=51.9 pTM=0.5 ipTM=0.167 tol=7.89
2024-07-11 20:08:15,933 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=52.3 pTM=0.496 ipTM=0.17 tol=4.23
2024-07-11 20:08:21,608 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=52.5 pTM=0.497 ipTM=0.165 tol=7.36
2024-07-11 20:08:27,268 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=52.3 pTM=0.495 ipTM=0.168 tol=4.8
2024-07-11 20:08:32,929 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=52.8 pTM=0.493 ipTM=0.183 tol=2.4
2024-07-11 20:08:38,585 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=53.4 pTM=0.498 ipTM=0.205 tol=2.17
2024-07-11 20:08:44,243 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=53.4 pTM=0.5 ipTM=0.19 tol=2.08
2024-07-11 20:08:49,905 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=53.7 pTM=0.501 ipTM=0.199 tol=2.33
2024-07-11 20:08:55,565 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=53.2 pTM=0.5 ipTM=0.203 tol=2.89
2024-07-11 20:09:01,235 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=53.9 pTM=0.501 ipTM=0.201 tol=2.38
2024-07-11 20:09:06,908 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=53.8 pTM=0.505 ipTM=0.204 tol=3.03
2024-07-11 20:09:12,585 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=53.6 pTM=0.501 ipTM=0.207 tol=2.43
2024-07-11 20:09:18,249 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=53.2 pTM=0.503 ipTM=0.203 tol=1.5
2024-07-11 20:09:23,915 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=53.4 pTM=0.498 ipTM=0.216 tol=1.82
2024-07-11 20:09:29,575 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=53 pTM=0.497 ipTM=0.188 tol=2.71
2024-07-11 20:09:35,237 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=53.6 pTM=0.5 ipTM=0.207 tol=3.06
2024-07-11 20:09:40,898 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=53.9 pTM=0.506 ipTM=0.212 tol=2.29
2024-07-11 20:09:46,579 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=53.7 pTM=0.502 ipTM=0.199 tol=3.06
2024-07-11 20:09:52,249 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=53.7 pTM=0.504 ipTM=0.188 tol=4.11
2024-07-11 20:09:57,919 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=53.8 pTM=0.502 ipTM=0.206 tol=2.29
2024-07-11 20:10:03,594 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=53.7 pTM=0.506 ipTM=0.194 tol=2.4
2024-07-11 20:10:09,271 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=53.8 pTM=0.503 ipTM=0.208 tol=2.67
2024-07-11 20:10:14,937 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=53.8 pTM=0.502 ipTM=0.202 tol=1.94
2024-07-11 20:10:20,614 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=54.6 pTM=0.504 ipTM=0.212 tol=2.11
2024-07-11 20:10:26,283 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=53.9 pTM=0.504 ipTM=0.205 tol=1.31
2024-07-11 20:10:31,944 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=54.2 pTM=0.504 ipTM=0.212 tol=1.85
2024-07-11 20:10:37,602 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=54.3 pTM=0.504 ipTM=0.213 tol=1.86
2024-07-11 20:10:43,282 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=54.4 pTM=0.502 ipTM=0.222 tol=1.75
2024-07-11 20:10:48,950 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=54.5 pTM=0.506 ipTM=0.217 tol=1.62
2024-07-11 20:10:54,621 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=54.4 pTM=0.502 ipTM=0.218 tol=1.63
2024-07-11 20:10:54,621 alphafold2_multimer_v3_model_5_seed_000 took 175.7s (30 recycles)
2024-07-11 20:10:54,810 reranking models by 'multimer' metric
2024-07-11 20:10:55,574 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 20:11:25,251 Relaxation took 30.4s
2024-07-11 20:11:25,251 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.9 pTM=0.588 ipTM=0.612
2024-07-11 20:11:56,557 Relaxation took 31.3s
2024-07-11 20:11:56,557 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=55.4 pTM=0.544 ipTM=0.245
2024-07-11 20:12:25,676 Relaxation took 29.1s
2024-07-11 20:12:25,676 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=54.4 pTM=0.502 ipTM=0.218
2024-07-11 20:12:55,757 Relaxation took 30.1s
2024-07-11 20:12:55,757 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=49.4 pTM=0.487 ipTM=0.189
2024-07-11 20:13:18,838 Relaxation took 23.1s
2024-07-11 20:13:18,838 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=51.1 pTM=0.476 ipTM=0.158
2024-07-11 20:13:19,923 Done