2024-07-11 20:14:37,247 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 20:14:37,578 Running on GPU
2024-07-11 20:14:45,044 Found 6 citations for tools or databases
2024-07-11 20:14:45,044 Query 1/1: NTRK2_KRA96 (length 982)
2024-07-11 20:14:45,524 Sleeping for 9s. Reason: PENDING
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2024-07-11 20:17:56,966 Sleeping for 10s. Reason: RUNNING
2024-07-11 20:18:09,282 Sleeping for 6s. Reason: PENDING
2024-07-11 20:18:15,692 Sleeping for 10s. Reason: RUNNING
2024-07-11 20:18:26,130 Sleeping for 5s. Reason: RUNNING
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2024-07-11 20:19:01,166 Sleeping for 5s. Reason: RUNNING
2024-07-11 20:19:06,585 Sleeping for 8s. Reason: RUNNING
2024-07-11 20:19:14,990 Sleeping for 8s. Reason: RUNNING
2024-07-11 20:19:23,400 Sleeping for 5s. Reason: RUNNING
2024-07-11 20:19:28,801 Sleeping for 8s. Reason: RUNNING
2024-07-11 20:19:37,202 Sleeping for 9s. Reason: RUNNING
2024-07-11 20:19:46,597 Sleeping for 8s. Reason: RUNNING
2024-07-11 20:19:56,031 Sleeping for 7s. Reason: RUNNING
2024-07-11 20:20:03,433 Sleeping for 10s. Reason: RUNNING
2024-07-11 20:20:13,838 Sleeping for 5s. Reason: RUNNING
2024-07-11 20:20:19,243 Sleeping for 5s. Reason: RUNNING
2024-07-11 20:20:24,632 Sleeping for 8s. Reason: RUNNING
2024-07-11 20:20:33,038 Sleeping for 7s. Reason: RUNNING
2024-07-11 20:20:40,444 Sleeping for 6s. Reason: RUNNING
2024-07-11 20:20:46,892 Sleeping for 9s. Reason: RUNNING
2024-07-11 20:20:59,701 Setting max_seq=508, max_extra_seq=1944
2024-07-11 20:24:17,363 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=61.3 pTM=0.401 ipTM=0.134
2024-07-11 20:24:38,930 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=62.8 pTM=0.406 ipTM=0.157 tol=6.85
2024-07-11 20:25:00,573 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=63.4 pTM=0.399 ipTM=0.162 tol=4.7
2024-07-11 20:25:22,246 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=63.5 pTM=0.402 ipTM=0.167 tol=2.41
2024-07-11 20:25:43,874 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=63.2 pTM=0.399 ipTM=0.18 tol=1.93
2024-07-11 20:26:05,562 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=62.8 pTM=0.4 ipTM=0.189 tol=2.2
2024-07-11 20:26:27,235 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=63 pTM=0.4 ipTM=0.192 tol=1.76
2024-07-11 20:26:48,915 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=63 pTM=0.399 ipTM=0.193 tol=1.76
2024-07-11 20:27:10,598 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=63.1 pTM=0.399 ipTM=0.193 tol=1.39
2024-07-11 20:27:32,285 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=62.9 pTM=0.398 ipTM=0.196 tol=1.06
2024-07-11 20:27:53,976 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=62.9 pTM=0.399 ipTM=0.197 tol=0.878
2024-07-11 20:28:15,706 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=62.9 pTM=0.4 ipTM=0.2 tol=0.827
2024-07-11 20:28:37,430 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=63.1 pTM=0.401 ipTM=0.197 tol=0.724
2024-07-11 20:28:59,149 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=62.8 pTM=0.399 ipTM=0.199 tol=0.768
2024-07-11 20:29:20,813 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=63 pTM=0.4 ipTM=0.199 tol=1.01
2024-07-11 20:29:42,528 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=63.2 pTM=0.4 ipTM=0.195 tol=1.12
2024-07-11 20:30:04,241 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=62.7 pTM=0.4 ipTM=0.199 tol=1.16
2024-07-11 20:30:25,933 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=62.6 pTM=0.402 ipTM=0.2 tol=0.838
2024-07-11 20:30:47,648 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=62.8 pTM=0.401 ipTM=0.201 tol=0.972
2024-07-11 20:31:09,350 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=62.7 pTM=0.403 ipTM=0.199 tol=0.962
2024-07-11 20:31:31,071 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=62.7 pTM=0.401 ipTM=0.198 tol=1.12
2024-07-11 20:31:52,793 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=62.8 pTM=0.401 ipTM=0.196 tol=1.07
2024-07-11 20:32:14,506 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=62.7 pTM=0.403 ipTM=0.194 tol=1.29
2024-07-11 20:32:36,207 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=62.6 pTM=0.402 ipTM=0.196 tol=1.91
2024-07-11 20:32:57,886 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=62.8 pTM=0.402 ipTM=0.194 tol=1.66
2024-07-11 20:33:19,591 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=62.8 pTM=0.402 ipTM=0.194 tol=1.6
2024-07-11 20:33:41,318 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=62.8 pTM=0.402 ipTM=0.194 tol=1.12
2024-07-11 20:34:03,022 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=62.8 pTM=0.401 ipTM=0.195 tol=1.43
2024-07-11 20:34:24,691 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=62.8 pTM=0.401 ipTM=0.195 tol=1.12
2024-07-11 20:34:46,422 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=62.9 pTM=0.404 ipTM=0.198 tol=1.14
2024-07-11 20:35:08,115 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=62.7 pTM=0.401 ipTM=0.197 tol=0.723
2024-07-11 20:35:08,116 alphafold2_multimer_v3_model_1_seed_000 took 813.4s (30 recycles)
2024-07-11 20:35:30,502 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=61.6 pTM=0.423 ipTM=0.203
2024-07-11 20:35:52,305 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=63.4 pTM=0.425 ipTM=0.23 tol=5.81
2024-07-11 20:36:14,075 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=63.8 pTM=0.421 ipTM=0.233 tol=4.24
2024-07-11 20:36:35,883 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=63.8 pTM=0.423 ipTM=0.241 tol=2.59
2024-07-11 20:36:57,672 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=63.8 pTM=0.42 ipTM=0.234 tol=2.61
2024-07-11 20:37:19,471 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=63.9 pTM=0.421 ipTM=0.24 tol=1.96
2024-07-11 20:37:41,269 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=63.8 pTM=0.422 ipTM=0.24 tol=1.64
2024-07-11 20:38:03,030 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=64 pTM=0.42 ipTM=0.236 tol=1.61
2024-07-11 20:38:24,795 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=63.8 pTM=0.419 ipTM=0.233 tol=1.73
2024-07-11 20:38:46,593 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=63.9 pTM=0.419 ipTM=0.237 tol=1.32
2024-07-11 20:39:08,340 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=63.8 pTM=0.42 ipTM=0.234 tol=1.91
2024-07-11 20:39:30,113 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=64.1 pTM=0.419 ipTM=0.235 tol=2.41
2024-07-11 20:39:51,907 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=64.1 pTM=0.42 ipTM=0.232 tol=2.21
2024-07-11 20:40:13,691 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=64.1 pTM=0.419 ipTM=0.233 tol=2.66
2024-07-11 20:40:35,508 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=64.2 pTM=0.421 ipTM=0.236 tol=1.86
2024-07-11 20:40:57,325 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=64.4 pTM=0.42 ipTM=0.234 tol=2.27
2024-07-11 20:41:19,114 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=64 pTM=0.42 ipTM=0.231 tol=1.79
2024-07-11 20:41:40,939 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=64.1 pTM=0.421 ipTM=0.234 tol=1.89
2024-07-11 20:42:02,759 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64.1 pTM=0.42 ipTM=0.235 tol=1.48
2024-07-11 20:42:24,555 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=64.2 pTM=0.423 ipTM=0.237 tol=1.36
2024-07-11 20:42:46,325 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64 pTM=0.421 ipTM=0.238 tol=1.42
2024-07-11 20:43:08,139 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=64.2 pTM=0.421 ipTM=0.239 tol=1.07
2024-07-11 20:43:29,925 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=64 pTM=0.421 ipTM=0.242 tol=1.31
2024-07-11 20:43:51,723 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=64.1 pTM=0.421 ipTM=0.241 tol=1.4
2024-07-11 20:44:13,513 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=64.2 pTM=0.422 ipTM=0.245 tol=1.44
2024-07-11 20:44:35,299 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=64.1 pTM=0.421 ipTM=0.241 tol=1.23
2024-07-11 20:44:57,109 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=64.1 pTM=0.422 ipTM=0.243 tol=1.43
2024-07-11 20:45:18,914 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=64.1 pTM=0.42 ipTM=0.24 tol=1.23
2024-07-11 20:45:40,727 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=64.2 pTM=0.421 ipTM=0.244 tol=1.5
2024-07-11 20:46:02,532 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=64.2 pTM=0.421 ipTM=0.242 tol=1.4
2024-07-11 20:46:24,308 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=64.1 pTM=0.42 ipTM=0.243 tol=1.19
2024-07-11 20:46:24,309 alphafold2_multimer_v3_model_2_seed_000 took 675.6s (30 recycles)
2024-07-11 20:46:46,724 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=61.6 pTM=0.406 ipTM=0.166
2024-07-11 20:47:08,547 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=62.3 pTM=0.406 ipTM=0.186 tol=8.53
2024-07-11 20:47:30,350 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=62.1 pTM=0.406 ipTM=0.189 tol=4.9
2024-07-11 20:47:52,133 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=61.9 pTM=0.41 ipTM=0.192 tol=3.06
2024-07-11 20:48:13,907 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=61.8 pTM=0.408 ipTM=0.187 tol=1.96
2024-07-11 20:48:35,696 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=61.8 pTM=0.409 ipTM=0.192 tol=1.26
2024-07-11 20:48:57,472 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=61.7 pTM=0.41 ipTM=0.192 tol=1.87
2024-07-11 20:49:19,287 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=61.9 pTM=0.411 ipTM=0.191 tol=1.25
2024-07-11 20:49:41,069 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61.9 pTM=0.411 ipTM=0.191 tol=1.43
2024-07-11 20:50:02,866 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=61.8 pTM=0.409 ipTM=0.193 tol=1.46
2024-07-11 20:50:24,618 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=61.6 pTM=0.411 ipTM=0.194 tol=1.4
2024-07-11 20:50:46,395 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=61.8 pTM=0.41 ipTM=0.193 tol=1.95
2024-07-11 20:51:08,173 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=61.9 pTM=0.412 ipTM=0.192 tol=2.57
2024-07-11 20:51:29,984 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=61.9 pTM=0.411 ipTM=0.19 tol=2.44
2024-07-11 20:51:51,782 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=61.8 pTM=0.41 ipTM=0.189 tol=2.29
2024-07-11 20:52:13,549 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=62.1 pTM=0.412 ipTM=0.188 tol=2.01
2024-07-11 20:52:35,342 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=61.5 pTM=0.411 ipTM=0.188 tol=3.13
2024-07-11 20:52:57,115 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.8 pTM=0.412 ipTM=0.189 tol=1.9
2024-07-11 20:53:18,877 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.6 pTM=0.409 ipTM=0.183 tol=2.6
2024-07-11 20:53:40,668 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.8 pTM=0.413 ipTM=0.187 tol=1.76
2024-07-11 20:54:02,441 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=61.5 pTM=0.409 ipTM=0.184 tol=1.31
2024-07-11 20:54:24,213 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=61.8 pTM=0.411 ipTM=0.187 tol=0.98
2024-07-11 20:54:45,966 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61.6 pTM=0.412 ipTM=0.189 tol=1.76
2024-07-11 20:55:07,724 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=61.7 pTM=0.412 ipTM=0.194 tol=1.3
2024-07-11 20:55:29,485 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.6 pTM=0.413 ipTM=0.191 tol=1.01
2024-07-11 20:55:51,248 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.7 pTM=0.415 ipTM=0.195 tol=0.862
2024-07-11 20:56:13,012 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=61.4 pTM=0.412 ipTM=0.191 tol=1.42
2024-07-11 20:56:34,794 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=61.7 pTM=0.412 ipTM=0.192 tol=1.03
2024-07-11 20:56:56,578 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=61.5 pTM=0.412 ipTM=0.193 tol=1.06
2024-07-11 20:57:18,333 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=61.8 pTM=0.414 ipTM=0.199 tol=0.989
2024-07-11 20:57:40,114 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=61.5 pTM=0.412 ipTM=0.192 tol=1.03
2024-07-11 20:57:40,114 alphafold2_multimer_v3_model_3_seed_000 took 675.2s (30 recycles)
2024-07-11 20:58:02,488 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=60.5 pTM=0.42 ipTM=0.172
2024-07-11 20:58:24,295 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=61.7 pTM=0.424 ipTM=0.235 tol=9.78
2024-07-11 20:58:46,091 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=60.9 pTM=0.425 ipTM=0.238 tol=8.29
2024-07-11 20:59:07,911 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=61.6 pTM=0.433 ipTM=0.244 tol=4.32
2024-07-11 20:59:29,690 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=62.4 pTM=0.464 ipTM=0.242 tol=5.12
2024-07-11 20:59:51,447 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=63.4 pTM=0.551 ipTM=0.274 tol=5.04
2024-07-11 21:00:13,199 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=63.8 pTM=0.591 ipTM=0.291 tol=2.42
2024-07-11 21:00:34,930 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.1 pTM=0.613 ipTM=0.303 tol=2.17
2024-07-11 21:00:56,660 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64.1 pTM=0.621 ipTM=0.31 tol=2.1
2024-07-11 21:01:18,408 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=64.2 pTM=0.626 ipTM=0.313 tol=1.58
2024-07-11 21:01:40,178 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=64 pTM=0.626 ipTM=0.317 tol=1.6
2024-07-11 21:02:01,924 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=64.1 pTM=0.626 ipTM=0.318 tol=2.31
2024-07-11 21:02:23,700 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=64.1 pTM=0.626 ipTM=0.313 tol=2.46
2024-07-11 21:02:45,461 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=63.9 pTM=0.626 ipTM=0.317 tol=2.49
2024-07-11 21:03:07,223 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64 pTM=0.625 ipTM=0.314 tol=2.45
2024-07-11 21:03:28,985 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64.3 pTM=0.633 ipTM=0.317 tol=2.06
2024-07-11 21:03:50,732 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=63.9 pTM=0.63 ipTM=0.318 tol=1.47
2024-07-11 21:04:12,487 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=64.1 pTM=0.63 ipTM=0.322 tol=1.34
2024-07-11 21:04:34,249 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=64.1 pTM=0.629 ipTM=0.318 tol=2.01
2024-07-11 21:04:56,011 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64 pTM=0.631 ipTM=0.324 tol=1.23
2024-07-11 21:05:17,774 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.1 pTM=0.633 ipTM=0.326 tol=1.26
2024-07-11 21:05:39,509 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=64.4 pTM=0.633 ipTM=0.326 tol=2.3
2024-07-11 21:06:01,277 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=64.1 pTM=0.631 ipTM=0.32 tol=1.45
2024-07-11 21:06:23,009 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=63.8 pTM=0.628 ipTM=0.327 tol=2.04
2024-07-11 21:06:44,757 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=64.1 pTM=0.633 ipTM=0.32 tol=2
2024-07-11 21:07:06,508 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64.2 pTM=0.631 ipTM=0.323 tol=1.16
2024-07-11 21:07:28,278 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64.1 pTM=0.631 ipTM=0.323 tol=1.42
2024-07-11 21:07:50,052 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64.3 pTM=0.634 ipTM=0.323 tol=1.5
2024-07-11 21:08:11,811 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=64.2 pTM=0.634 ipTM=0.319 tol=1.28
2024-07-11 21:08:33,553 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=64.4 pTM=0.631 ipTM=0.317 tol=2.61
2024-07-11 21:08:55,321 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=64.1 pTM=0.629 ipTM=0.319 tol=2.65
2024-07-11 21:08:55,322 alphafold2_multimer_v3_model_4_seed_000 took 674.6s (30 recycles)
2024-07-11 21:09:17,700 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=60.7 pTM=0.416 ipTM=0.174
2024-07-11 21:09:39,542 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=60.6 pTM=0.416 ipTM=0.197 tol=7.07
2024-07-11 21:10:01,388 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=61.8 pTM=0.417 ipTM=0.201 tol=6.26
2024-07-11 21:10:23,241 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61.4 pTM=0.417 ipTM=0.2 tol=3.53
2024-07-11 21:10:45,042 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.8 pTM=0.419 ipTM=0.198 tol=4.95
2024-07-11 21:11:06,879 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=61.8 pTM=0.42 ipTM=0.202 tol=2.33
2024-07-11 21:11:28,702 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61.7 pTM=0.421 ipTM=0.203 tol=2.3
2024-07-11 21:11:50,475 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=61.5 pTM=0.422 ipTM=0.198 tol=3.61
2024-07-11 21:12:12,256 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61.8 pTM=0.423 ipTM=0.199 tol=2.79
2024-07-11 21:12:34,058 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=61.5 pTM=0.42 ipTM=0.201 tol=2.98
2024-07-11 21:12:55,869 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61.6 pTM=0.422 ipTM=0.203 tol=3.33
2024-07-11 21:13:17,655 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=61.4 pTM=0.422 ipTM=0.204 tol=1.79
2024-07-11 21:13:39,502 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=61.6 pTM=0.422 ipTM=0.197 tol=1.98
2024-07-11 21:14:01,284 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=61.4 pTM=0.421 ipTM=0.195 tol=1.53
2024-07-11 21:14:23,125 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=61.6 pTM=0.421 ipTM=0.198 tol=1.29
2024-07-11 21:14:44,961 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=61.7 pTM=0.427 ipTM=0.197 tol=3.96
2024-07-11 21:15:06,757 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=61.4 pTM=0.425 ipTM=0.201 tol=3.27
2024-07-11 21:15:28,581 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=61.2 pTM=0.427 ipTM=0.203 tol=3.21
2024-07-11 21:15:50,389 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.6 pTM=0.427 ipTM=0.202 tol=3.4
2024-07-11 21:16:12,178 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61.5 pTM=0.427 ipTM=0.203 tol=3.04
2024-07-11 21:16:33,986 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61.3 pTM=0.426 ipTM=0.199 tol=1.49
2024-07-11 21:16:55,799 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=61.6 pTM=0.425 ipTM=0.203 tol=2.16
2024-07-11 21:17:17,604 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61.1 pTM=0.425 ipTM=0.207 tol=3.27
2024-07-11 21:17:39,423 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61.6 pTM=0.431 ipTM=0.206 tol=1.9
2024-07-11 21:18:01,267 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61.4 pTM=0.432 ipTM=0.208 tol=3.26
2024-07-11 21:18:23,071 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61.6 pTM=0.437 ipTM=0.208 tol=3.08
2024-07-11 21:18:44,896 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=61.3 pTM=0.429 ipTM=0.204 tol=3.48
2024-07-11 21:19:06,682 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=61.6 pTM=0.432 ipTM=0.203 tol=3.26
2024-07-11 21:19:28,513 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.2 pTM=0.431 ipTM=0.208 tol=3.21
2024-07-11 21:19:50,332 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61.6 pTM=0.447 ipTM=0.21 tol=1.67
2024-07-11 21:20:12,100 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61.8 pTM=0.526 ipTM=0.225 tol=2.26
2024-07-11 21:20:12,101 alphafold2_multimer_v3_model_5_seed_000 took 676.2s (30 recycles)
2024-07-11 21:20:12,697 reranking models by 'multimer' metric
2024-07-11 21:20:39,548 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 21:22:18,509 Relaxation took 125.8s
2024-07-11 21:22:18,509 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=64.1 pTM=0.629 ipTM=0.319
2024-07-11 21:24:01,229 Relaxation took 102.7s
2024-07-11 21:24:01,230 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61.8 pTM=0.526 ipTM=0.225
2024-07-11 21:26:01,959 Relaxation took 120.7s
2024-07-11 21:26:01,959 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=64.1 pTM=0.42 ipTM=0.243
2024-07-11 21:27:36,768 Relaxation took 94.8s
2024-07-11 21:27:36,768 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=62.7 pTM=0.401 ipTM=0.197
2024-07-11 21:29:14,559 Relaxation took 97.8s
2024-07-11 21:29:14,560 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=61.5 pTM=0.412 ipTM=0.192
2024-07-11 21:29:16,293 Done