2024-07-11 20:19:12,614 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 20:19:12,931 Running on GPU
2024-07-11 20:19:20,227 Found 6 citations for tools or databases
2024-07-11 20:19:20,227 Query 1/1: NU107_NSD2 (length 2290)
2024-07-11 20:19:26,296 Timeout while submitting to MSA server. Retrying...
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2024-07-11 20:25:27,525 Setting max_seq=508, max_extra_seq=2048
2024-07-11 20:32:23,281 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=58.8 pTM=0.437 ipTM=0.247
2024-07-11 20:36:10,203 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=58.2 pTM=0.439 ipTM=0.244 tol=16.9
2024-07-11 20:39:57,285 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=58.9 pTM=0.437 ipTM=0.278 tol=12.6
2024-07-11 20:43:44,343 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=58.8 pTM=0.431 ipTM=0.252 tol=13.1
2024-07-11 20:47:31,435 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=59.1 pTM=0.432 ipTM=0.241 tol=10.1
2024-07-11 20:51:18,554 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=59.2 pTM=0.431 ipTM=0.239 tol=7.27
2024-07-11 20:55:05,610 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=59.5 pTM=0.428 ipTM=0.238 tol=5.81
2024-07-11 20:58:52,752 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.5 pTM=0.428 ipTM=0.243 tol=5.22
2024-07-11 21:02:39,864 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=59.6 pTM=0.426 ipTM=0.236 tol=4.35
2024-07-11 21:06:27,040 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=59.5 pTM=0.425 ipTM=0.236 tol=5.17
2024-07-11 21:10:14,175 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=59.6 pTM=0.427 ipTM=0.249 tol=5.68
2024-07-11 21:14:01,277 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=59.7 pTM=0.427 ipTM=0.254 tol=4.87
2024-07-11 21:17:48,366 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=59.8 pTM=0.431 ipTM=0.252 tol=6.31
2024-07-11 21:21:35,492 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=59.8 pTM=0.428 ipTM=0.252 tol=5.27
2024-07-11 21:25:22,613 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=59.7 pTM=0.428 ipTM=0.251 tol=5.31
2024-07-11 21:29:09,722 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=59.7 pTM=0.429 ipTM=0.252 tol=3.26
2024-07-11 21:32:56,829 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=59.2 pTM=0.428 ipTM=0.246 tol=8.25
2024-07-11 21:36:43,953 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=59.6 pTM=0.428 ipTM=0.253 tol=6.96
2024-07-11 21:40:31,043 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=59.3 pTM=0.428 ipTM=0.246 tol=5.92
2024-07-11 21:44:18,170 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=59.3 pTM=0.427 ipTM=0.243 tol=5.29
2024-07-11 21:48:05,211 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=59 pTM=0.426 ipTM=0.239 tol=8.73
2024-07-11 21:51:52,281 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=59.2 pTM=0.429 ipTM=0.24 tol=7.16
2024-07-11 21:55:39,263 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=59.1 pTM=0.425 ipTM=0.241 tol=9.75
2024-07-11 21:59:26,345 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=59.4 pTM=0.427 ipTM=0.25 tol=6.53
2024-07-11 22:03:13,426 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=59.5 pTM=0.429 ipTM=0.248 tol=5.34
2024-07-11 22:07:00,625 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=59.6 pTM=0.427 ipTM=0.243 tol=6.16
2024-07-11 22:10:47,705 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=59.1 pTM=0.428 ipTM=0.243 tol=7.7
2024-07-11 22:14:34,824 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=59.5 pTM=0.427 ipTM=0.252 tol=6.39
2024-07-11 22:18:21,994 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=59.7 pTM=0.43 ipTM=0.25 tol=5.39
2024-07-11 22:22:09,112 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=59.5 pTM=0.429 ipTM=0.249 tol=4.7
2024-07-11 22:25:56,256 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=59.4 pTM=0.431 ipTM=0.253 tol=8.16
2024-07-11 22:25:56,259 alphafold2_multimer_v3_model_1_seed_000 took 7208.3s (30 recycles)
2024-07-11 22:29:46,522 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=58.9 pTM=0.433 ipTM=0.211
2024-07-11 22:33:33,884 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=59.5 pTM=0.431 ipTM=0.21 tol=22.2
2024-07-11 22:37:21,187 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=58.9 pTM=0.434 ipTM=0.212 tol=16.8
2024-07-11 22:41:08,261 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=60.2 pTM=0.434 ipTM=0.215 tol=13.5
2024-07-11 22:44:55,444 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=60.3 pTM=0.432 ipTM=0.21 tol=9.62
2024-07-11 22:48:42,569 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=60.2 pTM=0.431 ipTM=0.208 tol=8.17
2024-07-11 22:52:29,762 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=60.5 pTM=0.429 ipTM=0.205 tol=6.69
2024-07-11 22:56:17,107 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=60.6 pTM=0.429 ipTM=0.206 tol=6.4
2024-07-11 23:00:04,456 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=60.5 pTM=0.427 ipTM=0.205 tol=5.98
2024-07-11 23:03:51,763 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=60.9 pTM=0.427 ipTM=0.204 tol=4.85
2024-07-11 23:07:39,129 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=61.2 pTM=0.429 ipTM=0.205 tol=4.28
2024-07-11 23:11:26,381 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=61.3 pTM=0.428 ipTM=0.206 tol=5.24
2024-07-11 23:15:13,692 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=61.3 pTM=0.428 ipTM=0.204 tol=4.1
2024-07-11 23:19:01,045 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=61.3 pTM=0.427 ipTM=0.203 tol=4.78
2024-07-11 23:22:48,393 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=61.4 pTM=0.427 ipTM=0.207 tol=6.86
2024-07-11 23:26:35,754 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=61.3 pTM=0.426 ipTM=0.208 tol=5.42
2024-07-11 23:30:23,061 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=61.3 pTM=0.425 ipTM=0.205 tol=4.28
2024-07-11 23:34:10,436 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=61.3 pTM=0.425 ipTM=0.204 tol=5.66
2024-07-11 23:37:57,822 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=61.2 pTM=0.426 ipTM=0.203 tol=6.77
2024-07-11 23:41:45,122 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=61.2 pTM=0.427 ipTM=0.203 tol=4.98
2024-07-11 23:45:32,377 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=61 pTM=0.424 ipTM=0.202 tol=6.38
2024-07-11 23:49:19,721 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=61.2 pTM=0.426 ipTM=0.202 tol=3.59
2024-07-11 23:53:07,049 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=61.1 pTM=0.424 ipTM=0.201 tol=3.37
2024-07-11 23:56:54,361 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=61 pTM=0.425 ipTM=0.2 tol=3.55
2024-07-12 00:00:41,624 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=60.8 pTM=0.424 ipTM=0.202 tol=4.48
2024-07-12 00:04:28,849 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=61 pTM=0.423 ipTM=0.201 tol=3.83
2024-07-12 00:08:16,089 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=61 pTM=0.426 ipTM=0.201 tol=3.97
2024-07-12 00:12:03,323 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=61.2 pTM=0.427 ipTM=0.202 tol=3.48
2024-07-12 00:15:50,557 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=61.1 pTM=0.426 ipTM=0.202 tol=5.74
2024-07-12 00:19:37,790 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=61.1 pTM=0.426 ipTM=0.202 tol=4.76
2024-07-12 00:23:25,055 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=60.9 pTM=0.425 ipTM=0.203 tol=4.87
2024-07-12 00:23:25,058 alphafold2_multimer_v3_model_2_seed_000 took 7045.8s (30 recycles)
2024-07-12 00:27:15,225 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=58.4 pTM=0.44 ipTM=0.217
2024-07-12 00:31:02,519 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=58.8 pTM=0.434 ipTM=0.203 tol=17.8
2024-07-12 00:34:49,722 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=59.1 pTM=0.436 ipTM=0.206 tol=13.7
2024-07-12 00:38:39,106 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=59.1 pTM=0.435 ipTM=0.205 tol=9.83
2024-07-12 00:42:26,343 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59.1 pTM=0.436 ipTM=0.21 tol=7.84
2024-07-12 00:46:13,575 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=59 pTM=0.435 ipTM=0.208 tol=6.98
2024-07-12 00:50:00,900 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=59.4 pTM=0.434 ipTM=0.204 tol=8.37
2024-07-12 00:53:48,216 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=59.5 pTM=0.434 ipTM=0.205 tol=6.45
2024-07-12 00:57:35,550 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=59.2 pTM=0.434 ipTM=0.205 tol=7.09
2024-07-12 01:01:22,840 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=59.2 pTM=0.433 ipTM=0.207 tol=6.75
2024-07-12 01:05:10,233 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=59.1 pTM=0.435 ipTM=0.206 tol=6.91
2024-07-12 01:08:57,598 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=59.4 pTM=0.434 ipTM=0.206 tol=6.15
2024-07-12 01:12:44,962 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=59.4 pTM=0.434 ipTM=0.205 tol=5.25
2024-07-12 01:16:32,287 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=59.4 pTM=0.434 ipTM=0.204 tol=4.11
2024-07-12 01:20:19,686 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=59.5 pTM=0.434 ipTM=0.203 tol=7.77
2024-07-12 01:24:07,075 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=59.4 pTM=0.434 ipTM=0.205 tol=5.95
2024-07-12 01:27:54,415 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=59.6 pTM=0.434 ipTM=0.206 tol=4.53
2024-07-12 01:31:41,812 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=59.2 pTM=0.433 ipTM=0.206 tol=4.96
2024-07-12 01:35:29,181 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=59.2 pTM=0.434 ipTM=0.204 tol=3.68
2024-07-12 01:39:16,564 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=59.4 pTM=0.434 ipTM=0.204 tol=5.2
2024-07-12 01:43:03,929 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=59.2 pTM=0.433 ipTM=0.206 tol=4.48
2024-07-12 01:46:51,374 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=59.1 pTM=0.435 ipTM=0.204 tol=5.03
2024-07-12 01:50:38,785 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=59.1 pTM=0.434 ipTM=0.207 tol=5.3
2024-07-12 01:54:26,265 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=59.2 pTM=0.433 ipTM=0.203 tol=4.52
2024-07-12 01:58:13,636 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=59.3 pTM=0.434 ipTM=0.205 tol=3.26
2024-07-12 02:02:01,052 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=59.1 pTM=0.434 ipTM=0.205 tol=5.2
2024-07-12 02:05:48,381 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=59.4 pTM=0.435 ipTM=0.208 tol=4.8
2024-07-12 02:09:35,736 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=59.1 pTM=0.436 ipTM=0.207 tol=7.29
2024-07-12 02:13:23,079 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=59.5 pTM=0.435 ipTM=0.206 tol=5.82
2024-07-12 02:17:10,433 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=59.1 pTM=0.434 ipTM=0.205 tol=4.5
2024-07-12 02:20:57,763 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=59.2 pTM=0.435 ipTM=0.206 tol=4.01
2024-07-12 02:20:57,766 alphafold2_multimer_v3_model_3_seed_000 took 7049.7s (30 recycles)
2024-07-12 02:24:50,413 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=57.7 pTM=0.437 ipTM=0.221
2024-07-12 02:28:37,761 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=57.5 pTM=0.434 ipTM=0.221 tol=20.7
2024-07-12 02:32:25,205 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=58.1 pTM=0.43 ipTM=0.208 tol=14.6
2024-07-12 02:36:12,671 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=58 pTM=0.432 ipTM=0.211 tol=10
2024-07-12 02:40:00,243 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=58 pTM=0.43 ipTM=0.207 tol=12.3
2024-07-12 02:43:47,740 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=58 pTM=0.43 ipTM=0.206 tol=9.45
2024-07-12 02:47:35,262 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=58.1 pTM=0.428 ipTM=0.205 tol=9.1
2024-07-12 02:51:22,824 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=58.6 pTM=0.429 ipTM=0.203 tol=12.8
2024-07-12 02:55:10,279 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=57.9 pTM=0.426 ipTM=0.204 tol=14.8
2024-07-12 02:58:57,784 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=57.9 pTM=0.427 ipTM=0.204 tol=6.96
2024-07-12 03:02:45,343 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=57.8 pTM=0.428 ipTM=0.206 tol=7.36
2024-07-12 03:06:32,932 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=57.9 pTM=0.43 ipTM=0.205 tol=8.58
2024-07-12 03:10:20,468 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=58.2 pTM=0.429 ipTM=0.204 tol=8.91
2024-07-12 03:14:08,017 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=58.2 pTM=0.43 ipTM=0.205 tol=6.97
2024-07-12 03:17:55,562 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=58.1 pTM=0.427 ipTM=0.203 tol=7.85
2024-07-12 03:21:43,076 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=58 pTM=0.429 ipTM=0.206 tol=6.73
2024-07-12 03:25:30,552 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=58 pTM=0.43 ipTM=0.206 tol=6.63
2024-07-12 03:29:18,010 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=57.9 pTM=0.431 ipTM=0.206 tol=5.87
2024-07-12 03:33:05,477 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=58.1 pTM=0.431 ipTM=0.206 tol=5.65
2024-07-12 03:36:52,967 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=58 pTM=0.431 ipTM=0.207 tol=4.35
2024-07-12 03:40:40,426 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=58.3 pTM=0.43 ipTM=0.206 tol=6.33
2024-07-12 03:44:27,994 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=58.2 pTM=0.43 ipTM=0.207 tol=7.6
2024-07-12 03:48:15,576 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=58.2 pTM=0.433 ipTM=0.206 tol=6
2024-07-12 03:52:03,113 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=58.2 pTM=0.429 ipTM=0.207 tol=6.05
2024-07-12 03:55:50,623 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=58 pTM=0.431 ipTM=0.206 tol=4.7
2024-07-12 03:59:38,187 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=58.2 pTM=0.427 ipTM=0.204 tol=7.05
2024-07-12 04:03:25,779 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=58.3 pTM=0.432 ipTM=0.206 tol=7.02
2024-07-12 04:07:13,284 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=58.2 pTM=0.43 ipTM=0.205 tol=6.67
2024-07-12 04:11:00,698 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=58.3 pTM=0.433 ipTM=0.206 tol=7.03
2024-07-12 04:14:48,148 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=58.1 pTM=0.429 ipTM=0.206 tol=4.86
2024-07-12 04:18:35,586 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=58.3 pTM=0.43 ipTM=0.206 tol=6.31
2024-07-12 04:18:35,589 alphafold2_multimer_v3_model_4_seed_000 took 7052.5s (30 recycles)
2024-07-12 04:22:25,914 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=57.4 pTM=0.429 ipTM=0.197
2024-07-12 04:26:13,446 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=58.3 pTM=0.428 ipTM=0.197 tol=12.1
2024-07-12 04:30:00,760 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=58.8 pTM=0.429 ipTM=0.202 tol=13.4
2024-07-12 04:33:48,098 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=58.7 pTM=0.428 ipTM=0.201 tol=16.6
2024-07-12 04:37:35,473 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=58.9 pTM=0.429 ipTM=0.2 tol=11.4
2024-07-12 04:41:22,802 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=58.8 pTM=0.431 ipTM=0.203 tol=11.4
2024-07-12 04:45:10,197 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=58.9 pTM=0.431 ipTM=0.203 tol=7.3
2024-07-12 04:48:57,479 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=59.1 pTM=0.432 ipTM=0.205 tol=8.13
2024-07-12 04:52:44,751 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=58.8 pTM=0.43 ipTM=0.204 tol=9.03
2024-07-12 04:56:31,974 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=58.8 pTM=0.429 ipTM=0.203 tol=10.1
2024-07-12 05:00:19,278 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=58.8 pTM=0.432 ipTM=0.205 tol=9.63
2024-07-12 05:04:06,462 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=59.1 pTM=0.432 ipTM=0.205 tol=11.5
2024-07-12 05:07:53,753 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=59.1 pTM=0.431 ipTM=0.202 tol=11.5
2024-07-12 05:11:41,063 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=59.1 pTM=0.43 ipTM=0.202 tol=11.6
2024-07-12 05:15:28,452 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=58.9 pTM=0.43 ipTM=0.203 tol=12.9
2024-07-12 05:19:15,844 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=59.1 pTM=0.432 ipTM=0.204 tol=8.25
2024-07-12 05:23:03,119 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=59.1 pTM=0.43 ipTM=0.204 tol=9.36
2024-07-12 05:26:50,543 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=59 pTM=0.431 ipTM=0.203 tol=8.35
2024-07-12 05:30:37,915 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=58.9 pTM=0.431 ipTM=0.205 tol=13.5
2024-07-12 05:34:25,276 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=59 pTM=0.432 ipTM=0.204 tol=9.48
2024-07-12 05:38:12,548 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=59 pTM=0.432 ipTM=0.206 tol=11.1
2024-07-12 05:41:59,893 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=58.9 pTM=0.433 ipTM=0.205 tol=7.1
2024-07-12 05:45:47,250 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=58.8 pTM=0.432 ipTM=0.206 tol=8.48
2024-07-12 05:49:34,539 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=58.9 pTM=0.433 ipTM=0.207 tol=9.83
2024-07-12 05:53:21,777 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=58.7 pTM=0.434 ipTM=0.21 tol=5.3
2024-07-12 05:57:08,999 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=58.7 pTM=0.432 ipTM=0.22 tol=8.61
2024-07-12 06:00:56,258 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=58.8 pTM=0.435 ipTM=0.231 tol=13.4
2024-07-12 06:04:43,564 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=58.8 pTM=0.435 ipTM=0.234 tol=12.2
2024-07-12 06:08:30,867 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=59 pTM=0.436 ipTM=0.214 tol=7.12
2024-07-12 06:12:18,166 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=58.5 pTM=0.432 ipTM=0.206 tol=10.2
2024-07-12 06:16:05,367 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=59.1 pTM=0.436 ipTM=0.209 tol=10.5
2024-07-12 06:16:05,370 alphafold2_multimer_v3_model_5_seed_000 took 7046.8s (30 recycles)
2024-07-12 06:16:08,362 reranking models by 'multimer' metric
2024-07-12 06:16:42,644 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 06:28:57,208 Relaxation took 768.8s
2024-07-12 06:28:57,208 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=59.4 pTM=0.431 ipTM=0.253
2024-07-12 06:38:52,564 Relaxation took 595.4s
2024-07-12 06:38:52,564 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=59.1 pTM=0.436 ipTM=0.209
2024-07-12 06:47:49,101 Relaxation took 536.5s
2024-07-12 06:47:49,102 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=59.2 pTM=0.435 ipTM=0.206
2024-07-12 07:00:09,534 Relaxation took 740.4s
2024-07-12 07:00:09,534 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=58.3 pTM=0.43 ipTM=0.206
2024-07-12 07:07:53,647 Relaxation took 464.1s
2024-07-12 07:07:53,647 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=60.9 pTM=0.425 ipTM=0.203
2024-07-12 07:08:04,552 Done