2024-07-11 20:56:47,070 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-11 20:56:47,396 Running on GPU 2024-07-11 20:57:09,187 Found 6 citations for tools or databases 2024-07-11 20:57:09,187 Query 1/1: NXNL2_SGCA (length 543) 2024-07-11 20:57:09,682 Sleeping for 9s. Reason: PENDING 2024-07-11 20:57:19,090 Sleeping for 10s. Reason: RUNNING 2024-07-11 20:57:29,506 Sleeping for 10s. Reason: RUNNING 2024-07-11 20:57:39,918 Sleeping for 7s. Reason: RUNNING 2024-07-11 20:57:47,311 Sleeping for 7s. Reason: RUNNING 2024-07-11 20:57:54,737 Sleeping for 10s. Reason: RUNNING 2024-07-11 20:58:05,150 Sleeping for 6s. Reason: RUNNING 2024-07-11 20:58:11,592 Sleeping for 7s. Reason: RUNNING 2024-07-11 20:58:19,003 Sleeping for 10s. Reason: RUNNING 2024-07-11 20:58:30,879 Sleeping for 8s. Reason: PENDING 2024-07-11 20:58:39,298 Sleeping for 6s. Reason: RUNNING 2024-07-11 20:58:45,702 Sleeping for 10s. Reason: RUNNING 2024-07-11 20:58:56,118 Sleeping for 5s. Reason: RUNNING 2024-07-11 20:59:01,524 Sleeping for 8s. Reason: RUNNING 2024-07-11 20:59:11,534 Setting max_seq=508, max_extra_seq=2048 2024-07-11 21:02:44,050 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=69.7 pTM=0.411 ipTM=0.0803 2024-07-11 21:02:50,226 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=71 pTM=0.42 ipTM=0.0838 tol=6.71 2024-07-11 21:02:56,406 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=71.2 pTM=0.427 ipTM=0.0931 tol=10.9 2024-07-11 21:03:02,591 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=70.9 pTM=0.422 ipTM=0.1 tol=4.95 2024-07-11 21:03:08,797 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=71.3 pTM=0.421 ipTM=0.115 tol=4.58 2024-07-11 21:03:14,999 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=72 pTM=0.423 ipTM=0.397 tol=7.46 2024-07-11 21:03:21,193 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=74.4 pTM=0.434 ipTM=0.633 tol=6.95 2024-07-11 21:03:27,383 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=75.1 pTM=0.443 ipTM=0.632 tol=2.38 2024-07-11 21:03:33,578 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=75.2 pTM=0.445 ipTM=0.639 tol=0.716 2024-07-11 21:03:39,773 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=75.4 pTM=0.447 ipTM=0.624 tol=1.24 2024-07-11 21:03:45,966 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=75.3 pTM=0.449 ipTM=0.632 tol=0.948 2024-07-11 21:03:52,174 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=75.6 pTM=0.452 ipTM=0.641 tol=0.62 2024-07-11 21:03:58,385 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=75.4 pTM=0.452 ipTM=0.625 tol=1.2 2024-07-11 21:04:04,597 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=75.6 pTM=0.454 ipTM=0.609 tol=1.23 2024-07-11 21:04:10,807 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=75.7 pTM=0.456 ipTM=0.646 tol=1.13 2024-07-11 21:04:17,020 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=76.4 pTM=0.46 ipTM=0.662 tol=1.05 2024-07-11 21:04:23,237 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=76.2 pTM=0.459 ipTM=0.658 tol=1.13 2024-07-11 21:04:29,457 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=76.2 pTM=0.463 ipTM=0.658 tol=1.07 2024-07-11 21:04:35,677 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=76.1 pTM=0.46 ipTM=0.657 tol=0.545 2024-07-11 21:04:41,896 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=76.3 pTM=0.46 ipTM=0.655 tol=0.519 2024-07-11 21:04:48,118 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=75.9 pTM=0.456 ipTM=0.662 tol=0.809 2024-07-11 21:04:54,337 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=75.7 pTM=0.457 ipTM=0.643 tol=0.873 2024-07-11 21:05:00,561 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=75.7 pTM=0.455 ipTM=0.643 tol=0.979 2024-07-11 21:05:06,787 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=76.1 pTM=0.458 ipTM=0.644 tol=1.15 2024-07-11 21:05:13,011 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=75.8 pTM=0.457 ipTM=0.647 tol=0.704 2024-07-11 21:05:19,240 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=76.1 pTM=0.454 ipTM=0.648 tol=0.521 2024-07-11 21:05:25,467 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=75.4 pTM=0.45 ipTM=0.647 tol=0.757 2024-07-11 21:05:31,693 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=75.6 pTM=0.452 ipTM=0.652 tol=1.02 2024-07-11 21:05:37,922 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=75.9 pTM=0.454 ipTM=0.657 tol=0.576 2024-07-11 21:05:44,149 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=75.9 pTM=0.456 ipTM=0.657 tol=0.891 2024-07-11 21:05:50,379 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=75.8 pTM=0.454 ipTM=0.659 tol=0.999 2024-07-11 21:05:50,379 alphafold2_multimer_v3_model_1_seed_000 took 347.2s (30 recycles) 2024-07-11 21:05:56,823 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=69.3 pTM=0.466 ipTM=0.22 2024-07-11 21:06:03,073 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=69 pTM=0.433 ipTM=0.137 tol=6.39 2024-07-11 21:06:09,321 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=70.9 pTM=0.42 ipTM=0.623 tol=12.5 2024-07-11 21:06:15,567 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=73.9 pTM=0.432 ipTM=0.645 tol=8 2024-07-11 21:06:21,815 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=74.6 pTM=0.438 ipTM=0.631 tol=3.9 2024-07-11 21:06:28,056 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=74.9 pTM=0.446 ipTM=0.63 tol=2.69 2024-07-11 21:06:34,295 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=75.1 pTM=0.45 ipTM=0.636 tol=1.01 2024-07-11 21:06:40,532 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=75.1 pTM=0.453 ipTM=0.615 tol=1.59 2024-07-11 21:06:46,768 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=75.5 pTM=0.456 ipTM=0.638 tol=0.716 2024-07-11 21:06:53,004 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=75.3 pTM=0.457 ipTM=0.619 tol=1.28 2024-07-11 21:06:59,244 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=75.2 pTM=0.456 ipTM=0.627 tol=1.19 2024-07-11 21:07:05,482 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=75.5 pTM=0.457 ipTM=0.646 tol=1.11 2024-07-11 21:07:11,722 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=74.9 pTM=0.454 ipTM=0.635 tol=1.33 2024-07-11 21:07:17,955 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=75.4 pTM=0.458 ipTM=0.66 tol=1.47 2024-07-11 21:07:24,186 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=75.5 pTM=0.458 ipTM=0.666 tol=1.31 2024-07-11 21:07:30,413 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=75.5 pTM=0.463 ipTM=0.665 tol=2.41 2024-07-11 21:07:36,644 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=75.8 pTM=0.462 ipTM=0.667 tol=2.24 2024-07-11 21:07:42,876 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=75.9 pTM=0.465 ipTM=0.674 tol=0.762 2024-07-11 21:07:49,105 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=75.7 pTM=0.463 ipTM=0.676 tol=1.41 2024-07-11 21:07:55,336 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=75.7 pTM=0.462 ipTM=0.671 tol=1.55 2024-07-11 21:08:01,566 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=75.6 pTM=0.463 ipTM=0.669 tol=1.08 2024-07-11 21:08:07,797 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=75.5 pTM=0.461 ipTM=0.668 tol=1.4 2024-07-11 21:08:14,027 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=75.3 pTM=0.46 ipTM=0.665 tol=0.771 2024-07-11 21:08:20,259 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=75.4 pTM=0.461 ipTM=0.664 tol=1.56 2024-07-11 21:08:26,487 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=75.5 pTM=0.46 ipTM=0.665 tol=0.597 2024-07-11 21:08:32,716 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=75.5 pTM=0.459 ipTM=0.669 tol=0.916 2024-07-11 21:08:38,946 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=74.9 pTM=0.455 ipTM=0.663 tol=1.01 2024-07-11 21:08:45,176 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=75.2 pTM=0.461 ipTM=0.667 tol=0.84 2024-07-11 21:08:51,403 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=75.4 pTM=0.462 ipTM=0.655 tol=0.861 2024-07-11 21:08:57,635 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=75.3 pTM=0.463 ipTM=0.668 tol=0.948 2024-07-11 21:09:03,866 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=75.6 pTM=0.462 ipTM=0.684 tol=0.915 2024-07-11 21:09:03,867 alphafold2_multimer_v3_model_2_seed_000 took 193.3s (30 recycles) 2024-07-11 21:09:10,314 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=67.1 pTM=0.427 ipTM=0.638 2024-07-11 21:09:16,562 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=69.2 pTM=0.43 ipTM=0.414 tol=8.02 2024-07-11 21:09:22,803 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=70.2 pTM=0.431 ipTM=0.619 tol=5.46 2024-07-11 21:09:29,051 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=71.1 pTM=0.433 ipTM=0.614 tol=2.64 2024-07-11 21:09:35,302 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=71.6 pTM=0.435 ipTM=0.623 tol=2.04 2024-07-11 21:09:41,542 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=72.2 pTM=0.44 ipTM=0.619 tol=1.35 2024-07-11 21:09:47,782 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=72.2 pTM=0.442 ipTM=0.618 tol=1.3 2024-07-11 21:09:54,020 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=72.6 pTM=0.445 ipTM=0.622 tol=2.87 2024-07-11 21:10:00,259 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=73 pTM=0.448 ipTM=0.646 tol=1.28 2024-07-11 21:10:06,497 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=72.9 pTM=0.448 ipTM=0.618 tol=0.915 2024-07-11 21:10:12,734 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=72.9 pTM=0.45 ipTM=0.633 tol=0.756 2024-07-11 21:10:18,967 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=73.6 pTM=0.453 ipTM=0.654 tol=1.87 2024-07-11 21:10:25,202 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=72.9 pTM=0.451 ipTM=0.635 tol=1.54 2024-07-11 21:10:31,433 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=73.7 pTM=0.454 ipTM=0.663 tol=2.1 2024-07-11 21:10:37,666 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=73.4 pTM=0.451 ipTM=0.662 tol=0.853 2024-07-11 21:10:43,895 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=73.7 pTM=0.455 ipTM=0.652 tol=1.43 2024-07-11 21:10:50,128 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=74 pTM=0.454 ipTM=0.649 tol=1.27 2024-07-11 21:10:56,360 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=74.1 pTM=0.457 ipTM=0.653 tol=1.04 2024-07-11 21:11:02,591 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=74.2 pTM=0.455 ipTM=0.668 tol=1.17 2024-07-11 21:11:08,823 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=74.3 pTM=0.456 ipTM=0.64 tol=1.58 2024-07-11 21:11:15,062 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=74.2 pTM=0.456 ipTM=0.662 tol=0.367 2024-07-11 21:11:15,062 alphafold2_multimer_v3_model_3_seed_000 took 131.0s (20 recycles) 2024-07-11 21:11:21,505 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=65.8 pTM=0.417 ipTM=0.461 2024-07-11 21:11:27,752 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=69.7 pTM=0.416 ipTM=0.68 tol=10.9 2024-07-11 21:11:33,997 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=69.9 pTM=0.419 ipTM=0.615 tol=4.84 2024-07-11 21:11:40,244 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=70.9 pTM=0.42 ipTM=0.625 tol=3.03 2024-07-11 21:11:46,495 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=71.1 pTM=0.421 ipTM=0.637 tol=2.11 2024-07-11 21:11:52,746 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=71.6 pTM=0.425 ipTM=0.638 tol=1.04 2024-07-11 21:11:58,995 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=71.5 pTM=0.424 ipTM=0.639 tol=1 2024-07-11 21:12:05,246 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=71.8 pTM=0.425 ipTM=0.643 tol=2.41 2024-07-11 21:12:11,505 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=71.6 pTM=0.424 ipTM=0.651 tol=1.96 2024-07-11 21:12:17,758 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=71.6 pTM=0.424 ipTM=0.638 tol=2.2 2024-07-11 21:12:24,011 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=71.6 pTM=0.422 ipTM=0.641 tol=1.14 2024-07-11 21:12:30,267 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=68.4 pTM=0.42 ipTM=0.63 tol=15.8 2024-07-11 21:12:36,525 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=70.7 pTM=0.419 ipTM=0.63 tol=16.3 2024-07-11 21:12:42,783 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=71.4 pTM=0.42 ipTM=0.632 tol=5.84 2024-07-11 21:12:49,040 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=71.3 pTM=0.417 ipTM=0.635 tol=3.05 2024-07-11 21:12:55,296 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=71.5 pTM=0.419 ipTM=0.647 tol=3.07 2024-07-11 21:13:01,548 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=72.1 pTM=0.422 ipTM=0.664 tol=1.71 2024-07-11 21:13:07,800 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=72.6 pTM=0.428 ipTM=0.674 tol=1.23 2024-07-11 21:13:14,050 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=72.5 pTM=0.427 ipTM=0.677 tol=0.719 2024-07-11 21:13:20,298 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=72.3 pTM=0.426 ipTM=0.663 tol=0.979 2024-07-11 21:13:26,543 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=72.6 pTM=0.428 ipTM=0.687 tol=0.806 2024-07-11 21:13:32,794 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=72.2 pTM=0.427 ipTM=0.669 tol=0.951 2024-07-11 21:13:39,038 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=72.6 pTM=0.433 ipTM=0.666 tol=1.53 2024-07-11 21:13:45,287 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=72 pTM=0.427 ipTM=0.656 tol=1.12 2024-07-11 21:13:51,533 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=72.2 pTM=0.425 ipTM=0.675 tol=0.932 2024-07-11 21:13:57,781 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=72.2 pTM=0.424 ipTM=0.672 tol=0.714 2024-07-11 21:14:04,031 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=72.1 pTM=0.423 ipTM=0.666 tol=1.19 2024-07-11 21:14:10,282 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=72.4 pTM=0.425 ipTM=0.671 tol=1.23 2024-07-11 21:14:16,525 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=72.8 pTM=0.428 ipTM=0.68 tol=0.998 2024-07-11 21:14:22,775 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=72.6 pTM=0.431 ipTM=0.683 tol=1.36 2024-07-11 21:14:29,017 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=72.6 pTM=0.429 ipTM=0.683 tol=1.42 2024-07-11 21:14:29,018 alphafold2_multimer_v3_model_4_seed_000 took 193.8s (30 recycles) 2024-07-11 21:14:35,459 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=66.6 pTM=0.433 ipTM=0.281 2024-07-11 21:14:41,703 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.3 pTM=0.448 ipTM=0.211 tol=8.96 2024-07-11 21:14:47,961 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=67.8 pTM=0.468 ipTM=0.224 tol=2.72 2024-07-11 21:14:54,220 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=67.4 pTM=0.45 ipTM=0.163 tol=2.44 2024-07-11 21:15:00,480 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67.9 pTM=0.458 ipTM=0.186 tol=2.52 2024-07-11 21:15:06,733 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=67.8 pTM=0.453 ipTM=0.168 tol=2.3 2024-07-11 21:15:12,988 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=67.3 pTM=0.451 ipTM=0.159 tol=2.8 2024-07-11 21:15:19,234 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=67.2 pTM=0.443 ipTM=0.203 tol=4.34 2024-07-11 21:15:25,491 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=67.6 pTM=0.443 ipTM=0.247 tol=6.89 2024-07-11 21:15:31,751 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67.6 pTM=0.443 ipTM=0.144 tol=3.73 2024-07-11 21:15:38,019 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67.7 pTM=0.45 ipTM=0.156 tol=2.38 2024-07-11 21:15:44,277 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.6 pTM=0.452 ipTM=0.158 tol=2.54 2024-07-11 21:15:50,540 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.6 pTM=0.451 ipTM=0.2 tol=2.84 2024-07-11 21:15:56,800 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=67.6 pTM=0.449 ipTM=0.147 tol=1.42 2024-07-11 21:16:03,065 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=67.2 pTM=0.447 ipTM=0.145 tol=1.93 2024-07-11 21:16:09,321 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.8 pTM=0.442 ipTM=0.486 tol=4.52 2024-07-11 21:16:15,577 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=68.5 pTM=0.434 ipTM=0.478 tol=5.61 2024-07-11 21:16:21,830 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=69.8 pTM=0.437 ipTM=0.551 tol=7.13 2024-07-11 21:16:28,085 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=69.9 pTM=0.435 ipTM=0.486 tol=1.92 2024-07-11 21:16:34,340 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=68.9 pTM=0.438 ipTM=0.261 tol=4.67 2024-07-11 21:16:40,592 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=70 pTM=0.498 ipTM=0.334 tol=9.65 2024-07-11 21:16:46,852 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=70.8 pTM=0.513 ipTM=0.376 tol=4.31 2024-07-11 21:16:53,109 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=70.1 pTM=0.496 ipTM=0.304 tol=2.21 2024-07-11 21:16:59,369 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=70.1 pTM=0.492 ipTM=0.293 tol=1.78 2024-07-11 21:17:05,637 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=70.4 pTM=0.494 ipTM=0.298 tol=1.85 2024-07-11 21:17:11,901 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=70.5 pTM=0.496 ipTM=0.308 tol=1.45 2024-07-11 21:17:18,165 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=70.5 pTM=0.494 ipTM=0.302 tol=1.09 2024-07-11 21:17:24,428 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=70.6 pTM=0.497 ipTM=0.312 tol=1.94 2024-07-11 21:17:30,693 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=70.7 pTM=0.496 ipTM=0.307 tol=1.29 2024-07-11 21:17:36,956 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=70.7 pTM=0.496 ipTM=0.31 tol=1.38 2024-07-11 21:17:43,220 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=70.1 pTM=0.49 ipTM=0.286 tol=0.89 2024-07-11 21:17:43,220 alphafold2_multimer_v3_model_5_seed_000 took 194.0s (30 recycles) 2024-07-11 21:17:43,418 reranking models by 'multimer' metric 2024-07-11 21:18:05,888 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-11 21:18:34,743 Relaxation took 51.3s 2024-07-11 21:18:34,743 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=75.6 pTM=0.462 ipTM=0.684 2024-07-11 21:18:48,435 Relaxation took 13.7s 2024-07-11 21:18:48,435 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=72.6 pTM=0.429 ipTM=0.683 2024-07-11 21:19:03,084 Relaxation took 14.6s 2024-07-11 21:19:03,084 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=74.2 pTM=0.456 ipTM=0.662 2024-07-11 21:19:17,427 Relaxation took 14.3s 2024-07-11 21:19:17,428 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=75.8 pTM=0.454 ipTM=0.659 2024-07-11 21:19:33,301 Relaxation took 15.9s 2024-07-11 21:19:33,301 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=70.1 pTM=0.49 ipTM=0.286 2024-07-11 21:19:34,367 Done