2024-07-11 23:37:35,243 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 23:37:35,582 Running on GPU
2024-07-11 23:37:47,239 Found 6 citations for tools or databases
2024-07-11 23:37:47,239 Query 1/1: OLIG3_CCL5 (length 363)
2024-07-11 23:37:47,705 Sleeping for 9s. Reason: PENDING
2024-07-11 23:37:57,127 Sleeping for 7s. Reason: RUNNING
2024-07-11 23:38:04,543 Sleeping for 9s. Reason: RUNNING
2024-07-11 23:38:15,396 Sleeping for 7s. Reason: PENDING
2024-07-11 23:38:22,808 Sleeping for 10s. Reason: RUNNING
2024-07-11 23:38:34,906 Setting max_seq=508, max_extra_seq=2048
2024-07-11 23:42:13,672 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=47.7 pTM=0.274 ipTM=0.206
2024-07-11 23:42:17,102 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=47.7 pTM=0.276 ipTM=0.226 tol=9.39
2024-07-11 23:42:20,536 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=49.8 pTM=0.312 ipTM=0.394 tol=7.91
2024-07-11 23:42:23,967 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=49.8 pTM=0.297 ipTM=0.292 tol=8.03
2024-07-11 23:42:27,399 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=50.9 pTM=0.321 ipTM=0.426 tol=2.21
2024-07-11 23:42:30,830 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=50.2 pTM=0.303 ipTM=0.314 tol=2.74
2024-07-11 23:42:34,260 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=50.8 pTM=0.321 ipTM=0.433 tol=3.01
2024-07-11 23:42:37,697 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=50.3 pTM=0.306 ipTM=0.331 tol=2.96
2024-07-11 23:42:41,133 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=50.9 pTM=0.318 ipTM=0.42 tol=1.34
2024-07-11 23:42:44,567 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=50.4 pTM=0.305 ipTM=0.317 tol=2.32
2024-07-11 23:42:48,002 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=50.8 pTM=0.32 ipTM=0.417 tol=1.89
2024-07-11 23:42:51,435 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=50.4 pTM=0.309 ipTM=0.334 tol=1.53
2024-07-11 23:42:54,870 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=51.1 pTM=0.318 ipTM=0.416 tol=1.93
2024-07-11 23:42:58,302 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=50.6 pTM=0.311 ipTM=0.346 tol=2.87
2024-07-11 23:43:01,737 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=50.7 pTM=0.318 ipTM=0.418 tol=2.66
2024-07-11 23:43:05,168 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=50.5 pTM=0.305 ipTM=0.324 tol=4.22
2024-07-11 23:43:08,601 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=50.8 pTM=0.315 ipTM=0.409 tol=2.59
2024-07-11 23:43:12,033 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=50.6 pTM=0.31 ipTM=0.337 tol=3.06
2024-07-11 23:43:15,469 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=51.1 pTM=0.315 ipTM=0.402 tol=1.75
2024-07-11 23:43:18,900 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=50.3 pTM=0.306 ipTM=0.323 tol=2.23
2024-07-11 23:43:22,336 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=50.7 pTM=0.315 ipTM=0.402 tol=3.04
2024-07-11 23:43:25,768 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=50.3 pTM=0.309 ipTM=0.33 tol=5.34
2024-07-11 23:43:29,201 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=50.8 pTM=0.317 ipTM=0.415 tol=3.52
2024-07-11 23:43:32,637 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=50.1 pTM=0.306 ipTM=0.322 tol=2.33
2024-07-11 23:43:36,071 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=51.2 pTM=0.318 ipTM=0.411 tol=3.69
2024-07-11 23:43:39,504 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=50.8 pTM=0.31 ipTM=0.336 tol=1.99
2024-07-11 23:43:42,940 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=51.1 pTM=0.317 ipTM=0.414 tol=2.34
2024-07-11 23:43:46,374 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=51.1 pTM=0.311 ipTM=0.344 tol=1.81
2024-07-11 23:43:49,811 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=50.7 pTM=0.315 ipTM=0.401 tol=2.45
2024-07-11 23:43:53,246 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=50.1 pTM=0.307 ipTM=0.325 tol=3.24
2024-07-11 23:43:56,687 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=50.6 pTM=0.316 ipTM=0.408 tol=2.44
2024-07-11 23:43:56,687 alphafold2_multimer_v3_model_1_seed_000 took 263.5s (30 recycles)
2024-07-11 23:44:00,228 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=46.1 pTM=0.249 ipTM=0.187
2024-07-11 23:44:03,663 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=44.8 pTM=0.244 ipTM=0.144 tol=12.5
2024-07-11 23:44:07,100 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=45.4 pTM=0.249 ipTM=0.12 tol=14.2
2024-07-11 23:44:10,538 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=45.8 pTM=0.248 ipTM=0.115 tol=14.8
2024-07-11 23:44:13,976 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=46 pTM=0.248 ipTM=0.117 tol=11.8
2024-07-11 23:44:17,418 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=46.1 pTM=0.25 ipTM=0.12 tol=5.41
2024-07-11 23:44:20,858 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=46.1 pTM=0.25 ipTM=0.118 tol=6.7
2024-07-11 23:44:24,298 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=46.3 pTM=0.249 ipTM=0.115 tol=3.88
2024-07-11 23:44:27,738 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=46.3 pTM=0.25 ipTM=0.122 tol=6.43
2024-07-11 23:44:31,177 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=46.1 pTM=0.25 ipTM=0.116 tol=6.05
2024-07-11 23:44:34,615 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=46.3 pTM=0.253 ipTM=0.127 tol=4.3
2024-07-11 23:44:38,051 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=46.3 pTM=0.253 ipTM=0.123 tol=5.96
2024-07-11 23:44:41,492 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=46.5 pTM=0.254 ipTM=0.128 tol=4.08
2024-07-11 23:44:44,927 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=46.7 pTM=0.255 ipTM=0.133 tol=3.27
2024-07-11 23:44:48,369 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=46.5 pTM=0.252 ipTM=0.129 tol=2.91
2024-07-11 23:44:51,805 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=46.8 pTM=0.258 ipTM=0.143 tol=3.49
2024-07-11 23:44:55,247 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=46.5 pTM=0.255 ipTM=0.133 tol=4.56
2024-07-11 23:44:58,681 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=47 pTM=0.258 ipTM=0.139 tol=2.46
2024-07-11 23:45:02,120 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=46.9 pTM=0.257 ipTM=0.136 tol=3.46
2024-07-11 23:45:05,558 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=46.6 pTM=0.254 ipTM=0.13 tol=6.17
2024-07-11 23:45:08,998 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=46.8 pTM=0.256 ipTM=0.136 tol=5.49
2024-07-11 23:45:12,434 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=46.4 pTM=0.252 ipTM=0.122 tol=4.49
2024-07-11 23:45:15,875 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=46.5 pTM=0.253 ipTM=0.126 tol=5.08
2024-07-11 23:45:19,312 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=46.2 pTM=0.252 ipTM=0.127 tol=3.57
2024-07-11 23:45:22,753 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=46.6 pTM=0.255 ipTM=0.134 tol=2.42
2024-07-11 23:45:26,193 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=46.6 pTM=0.254 ipTM=0.132 tol=2.83
2024-07-11 23:45:29,633 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=46.6 pTM=0.255 ipTM=0.136 tol=3.28
2024-07-11 23:45:33,072 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=46.5 pTM=0.254 ipTM=0.13 tol=3.88
2024-07-11 23:45:36,513 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=46.2 pTM=0.253 ipTM=0.13 tol=3.54
2024-07-11 23:45:39,950 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=46.4 pTM=0.255 ipTM=0.13 tol=6.98
2024-07-11 23:45:43,390 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=46.3 pTM=0.253 ipTM=0.128 tol=5.26
2024-07-11 23:45:43,391 alphafold2_multimer_v3_model_2_seed_000 took 106.6s (30 recycles)
2024-07-11 23:45:46,950 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=47.2 pTM=0.258 ipTM=0.175
2024-07-11 23:45:50,403 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=47.5 pTM=0.255 ipTM=0.146 tol=12.3
2024-07-11 23:45:53,861 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=47.6 pTM=0.255 ipTM=0.131 tol=5.46
2024-07-11 23:45:57,317 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=47.2 pTM=0.256 ipTM=0.126 tol=3.18
2024-07-11 23:46:00,774 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=47.6 pTM=0.257 ipTM=0.128 tol=4.72
2024-07-11 23:46:04,229 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=46.8 pTM=0.254 ipTM=0.117 tol=3.17
2024-07-11 23:46:07,683 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=47.3 pTM=0.257 ipTM=0.125 tol=2.4
2024-07-11 23:46:11,137 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=47.2 pTM=0.257 ipTM=0.124 tol=1.66
2024-07-11 23:46:14,591 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=47.5 pTM=0.259 ipTM=0.131 tol=1.94
2024-07-11 23:46:18,045 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=47.2 pTM=0.258 ipTM=0.124 tol=2.55
2024-07-11 23:46:21,499 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=47.5 pTM=0.262 ipTM=0.133 tol=2.7
2024-07-11 23:46:24,954 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=47.4 pTM=0.258 ipTM=0.124 tol=2.24
2024-07-11 23:46:28,410 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=47.7 pTM=0.259 ipTM=0.129 tol=2.48
2024-07-11 23:46:31,864 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=47.4 pTM=0.257 ipTM=0.122 tol=2.63
2024-07-11 23:46:35,320 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=47.3 pTM=0.256 ipTM=0.126 tol=2.97
2024-07-11 23:46:38,775 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=47.6 pTM=0.258 ipTM=0.125 tol=2.03
2024-07-11 23:46:42,231 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=47.4 pTM=0.257 ipTM=0.128 tol=1.15
2024-07-11 23:46:45,685 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=47.2 pTM=0.255 ipTM=0.12 tol=2.9
2024-07-11 23:46:49,141 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=47.2 pTM=0.255 ipTM=0.127 tol=2.79
2024-07-11 23:46:52,596 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=47.4 pTM=0.258 ipTM=0.126 tol=2.15
2024-07-11 23:46:56,050 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=47.6 pTM=0.258 ipTM=0.127 tol=1.72
2024-07-11 23:46:59,504 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=47.2 pTM=0.254 ipTM=0.117 tol=2
2024-07-11 23:47:02,958 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=47.1 pTM=0.256 ipTM=0.127 tol=1.41
2024-07-11 23:47:06,413 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=46.9 pTM=0.256 ipTM=0.121 tol=1.54
2024-07-11 23:47:09,869 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=47.6 pTM=0.259 ipTM=0.132 tol=2.19
2024-07-11 23:47:13,325 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=47.3 pTM=0.257 ipTM=0.122 tol=1.46
2024-07-11 23:47:16,778 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=47.1 pTM=0.255 ipTM=0.127 tol=3.52
2024-07-11 23:47:20,233 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=47.4 pTM=0.258 ipTM=0.124 tol=1.76
2024-07-11 23:47:23,690 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=47 pTM=0.257 ipTM=0.127 tol=3.93
2024-07-11 23:47:27,145 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=47.4 pTM=0.257 ipTM=0.125 tol=2.82
2024-07-11 23:47:30,599 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=47.4 pTM=0.26 ipTM=0.131 tol=2.07
2024-07-11 23:47:30,600 alphafold2_multimer_v3_model_3_seed_000 took 107.1s (30 recycles)
2024-07-11 23:47:34,140 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=45.8 pTM=0.268 ipTM=0.183
2024-07-11 23:47:37,578 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=46.9 pTM=0.278 ipTM=0.258 tol=9.46
2024-07-11 23:47:41,020 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=47 pTM=0.275 ipTM=0.257 tol=7.16
2024-07-11 23:47:44,459 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=47.6 pTM=0.284 ipTM=0.303 tol=5.02
2024-07-11 23:47:47,901 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=47.6 pTM=0.274 ipTM=0.265 tol=3.12
2024-07-11 23:47:51,341 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=47.6 pTM=0.277 ipTM=0.275 tol=2.31
2024-07-11 23:47:54,784 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=47.6 pTM=0.273 ipTM=0.265 tol=2.7
2024-07-11 23:47:58,223 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=48.2 pTM=0.287 ipTM=0.322 tol=4.1
2024-07-11 23:48:01,666 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=47.7 pTM=0.276 ipTM=0.271 tol=3.48
2024-07-11 23:48:05,105 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=48 pTM=0.281 ipTM=0.299 tol=1.57
2024-07-11 23:48:08,547 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=48.2 pTM=0.283 ipTM=0.296 tol=3.71
2024-07-11 23:48:11,985 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=47.9 pTM=0.284 ipTM=0.308 tol=3.95
2024-07-11 23:48:15,426 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=48.6 pTM=0.291 ipTM=0.34 tol=1.86
2024-07-11 23:48:18,864 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=48 pTM=0.279 ipTM=0.295 tol=1.84
2024-07-11 23:48:22,305 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=48.3 pTM=0.288 ipTM=0.323 tol=2.34
2024-07-11 23:48:25,744 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=47.8 pTM=0.274 ipTM=0.266 tol=1.54
2024-07-11 23:48:29,186 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=48.1 pTM=0.282 ipTM=0.28 tol=2.45
2024-07-11 23:48:32,624 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=47.7 pTM=0.276 ipTM=0.265 tol=2.22
2024-07-11 23:48:36,066 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=47.9 pTM=0.278 ipTM=0.269 tol=1.07
2024-07-11 23:48:39,506 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=47.8 pTM=0.28 ipTM=0.297 tol=3.59
2024-07-11 23:48:42,946 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=48 pTM=0.282 ipTM=0.292 tol=2.91
2024-07-11 23:48:46,385 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=47.9 pTM=0.279 ipTM=0.285 tol=1.83
2024-07-11 23:48:49,826 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=48 pTM=0.282 ipTM=0.289 tol=1.68
2024-07-11 23:48:53,266 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=47.3 pTM=0.276 ipTM=0.263 tol=3.64
2024-07-11 23:48:56,708 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=48.2 pTM=0.282 ipTM=0.287 tol=2.16
2024-07-11 23:49:00,150 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=47.9 pTM=0.277 ipTM=0.287 tol=3.62
2024-07-11 23:49:03,590 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=48.6 pTM=0.294 ipTM=0.351 tol=1.89
2024-07-11 23:49:07,028 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=48 pTM=0.28 ipTM=0.286 tol=1.88
2024-07-11 23:49:10,468 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=48.2 pTM=0.286 ipTM=0.313 tol=1.55
2024-07-11 23:49:13,907 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=47.9 pTM=0.275 ipTM=0.268 tol=1.27
2024-07-11 23:49:17,346 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=48.3 pTM=0.291 ipTM=0.332 tol=2.28
2024-07-11 23:49:17,347 alphafold2_multimer_v3_model_4_seed_000 took 106.6s (30 recycles)
2024-07-11 23:49:20,905 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=45.3 pTM=0.257 ipTM=0.142
2024-07-11 23:49:24,355 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=46.1 pTM=0.249 ipTM=0.106 tol=14.6
2024-07-11 23:49:27,810 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=45.8 pTM=0.249 ipTM=0.107 tol=6.8
2024-07-11 23:49:31,263 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=45.7 pTM=0.247 ipTM=0.107 tol=7.93
2024-07-11 23:49:34,712 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=45.6 pTM=0.248 ipTM=0.108 tol=8.77
2024-07-11 23:49:38,160 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=45.1 pTM=0.249 ipTM=0.108 tol=6.5
2024-07-11 23:49:41,606 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=45.3 pTM=0.249 ipTM=0.103 tol=7.14
2024-07-11 23:49:45,051 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=45.3 pTM=0.249 ipTM=0.108 tol=4.22
2024-07-11 23:49:48,498 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=45.8 pTM=0.249 ipTM=0.103 tol=6.54
2024-07-11 23:49:51,944 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=45.5 pTM=0.248 ipTM=0.104 tol=2.75
2024-07-11 23:49:55,390 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=45.5 pTM=0.251 ipTM=0.101 tol=5.79
2024-07-11 23:49:58,836 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=45.7 pTM=0.249 ipTM=0.105 tol=1.83
2024-07-11 23:50:02,283 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=45.9 pTM=0.249 ipTM=0.103 tol=1.66
2024-07-11 23:50:05,728 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=45.6 pTM=0.25 ipTM=0.105 tol=5.18
2024-07-11 23:50:09,175 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=45.7 pTM=0.248 ipTM=0.102 tol=4.92
2024-07-11 23:50:12,617 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=46 pTM=0.249 ipTM=0.103 tol=2.77
2024-07-11 23:50:16,065 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=45.7 pTM=0.249 ipTM=0.103 tol=1.15
2024-07-11 23:50:19,511 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=45.7 pTM=0.25 ipTM=0.105 tol=1.73
2024-07-11 23:50:22,959 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=45.6 pTM=0.248 ipTM=0.103 tol=1.86
2024-07-11 23:50:26,404 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=45.7 pTM=0.248 ipTM=0.103 tol=1.36
2024-07-11 23:50:29,851 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=45.9 pTM=0.248 ipTM=0.103 tol=1.35
2024-07-11 23:50:33,297 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=45.6 pTM=0.248 ipTM=0.101 tol=1.5
2024-07-11 23:50:36,739 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=45.9 pTM=0.249 ipTM=0.105 tol=1.58
2024-07-11 23:50:40,184 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=45.3 pTM=0.248 ipTM=0.102 tol=5.51
2024-07-11 23:50:43,633 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=46.1 pTM=0.25 ipTM=0.105 tol=5.86
2024-07-11 23:50:47,079 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=45.9 pTM=0.249 ipTM=0.103 tol=2.28
2024-07-11 23:50:50,526 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=45.4 pTM=0.25 ipTM=0.108 tol=5.6
2024-07-11 23:50:53,973 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=45.7 pTM=0.247 ipTM=0.0991 tol=5.69
2024-07-11 23:50:57,417 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=45.6 pTM=0.249 ipTM=0.105 tol=1.73
2024-07-11 23:51:00,863 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=45.9 pTM=0.249 ipTM=0.103 tol=1.95
2024-07-11 23:51:04,309 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=45.3 pTM=0.249 ipTM=0.104 tol=5.35
2024-07-11 23:51:04,309 alphafold2_multimer_v3_model_5_seed_000 took 106.9s (30 recycles)
2024-07-11 23:51:04,411 reranking models by 'multimer' metric
2024-07-11 23:51:22,581 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-11 23:51:43,092 Relaxation took 38.7s
2024-07-11 23:51:43,092 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=50.6 pTM=0.316 ipTM=0.408
2024-07-11 23:52:01,931 Relaxation took 18.8s
2024-07-11 23:52:01,931 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=48.3 pTM=0.291 ipTM=0.332
2024-07-11 23:52:21,496 Relaxation took 19.6s
2024-07-11 23:52:21,497 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=47.4 pTM=0.26 ipTM=0.131
2024-07-11 23:52:40,515 Relaxation took 19.0s
2024-07-11 23:52:40,516 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=46.3 pTM=0.253 ipTM=0.128
2024-07-11 23:52:53,515 Relaxation took 13.0s
2024-07-11 23:52:53,516 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=45.3 pTM=0.249 ipTM=0.104
2024-07-11 23:52:58,409 Done