2024-07-11 23:50:41,161 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-11 23:50:41,481 Running on GPU
2024-07-11 23:50:55,937 Found 6 citations for tools or databases
2024-07-11 23:50:55,937 Query 1/1: OPN3_PITM2 (length 1751)
2024-07-11 23:50:56,393 Sleeping for 10s. Reason: PENDING
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2024-07-11 23:53:56,558 Sleeping for 8s. Reason: RUNNING
2024-07-11 23:54:04,964 Sleeping for 5s. Reason: RUNNING
2024-07-11 23:54:12,768 Sleeping for 6s. Reason: PENDING
2024-07-11 23:54:19,176 Sleeping for 7s. Reason: RUNNING
2024-07-11 23:54:26,589 Sleeping for 6s. Reason: RUNNING
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2024-07-11 23:55:06,655 Sleeping for 7s. Reason: RUNNING
2024-07-11 23:55:14,073 Sleeping for 8s. Reason: RUNNING
2024-07-11 23:55:22,488 Sleeping for 9s. Reason: RUNNING
2024-07-11 23:55:31,902 Sleeping for 9s. Reason: RUNNING
2024-07-11 23:55:41,313 Sleeping for 8s. Reason: RUNNING
2024-07-11 23:55:49,729 Sleeping for 6s. Reason: RUNNING
2024-07-11 23:55:56,148 Sleeping for 5s. Reason: RUNNING
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2024-07-11 23:56:32,254 Sleeping for 8s. Reason: RUNNING
2024-07-11 23:56:40,667 Sleeping for 6s. Reason: RUNNING
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2024-07-11 23:56:52,483 Sleeping for 8s. Reason: RUNNING
2024-07-11 23:57:05,056 Setting max_seq=508, max_extra_seq=2048
2024-07-12 00:02:15,677 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=57.1 pTM=0.359 ipTM=0.218
2024-07-12 00:04:00,550 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=58.5 pTM=0.356 ipTM=0.268 tol=9.99
2024-07-12 00:05:45,402 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=59 pTM=0.377 ipTM=0.275 tol=5.14
2024-07-12 00:07:30,257 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=59.7 pTM=0.381 ipTM=0.234 tol=4.35
2024-07-12 00:09:15,145 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=59.6 pTM=0.373 ipTM=0.208 tol=4.19
2024-07-12 00:10:59,983 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=59.6 pTM=0.368 ipTM=0.203 tol=1.95
2024-07-12 00:12:44,865 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=59.6 pTM=0.362 ipTM=0.2 tol=1.73
2024-07-12 00:14:29,749 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.7 pTM=0.361 ipTM=0.203 tol=2.32
2024-07-12 00:16:14,627 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=59.7 pTM=0.359 ipTM=0.206 tol=2.33
2024-07-12 00:17:59,495 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=59.6 pTM=0.357 ipTM=0.207 tol=2.57
2024-07-12 00:19:44,389 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=59.9 pTM=0.362 ipTM=0.213 tol=2.61
2024-07-12 00:21:29,259 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=59.7 pTM=0.359 ipTM=0.207 tol=1.79
2024-07-12 00:23:14,112 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=59.5 pTM=0.358 ipTM=0.21 tol=2.1
2024-07-12 00:24:59,024 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=59.6 pTM=0.355 ipTM=0.212 tol=2
2024-07-12 00:26:43,936 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=59.8 pTM=0.356 ipTM=0.212 tol=2.69
2024-07-12 00:28:28,834 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=59.6 pTM=0.356 ipTM=0.212 tol=3.85
2024-07-12 00:30:13,750 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=59.7 pTM=0.354 ipTM=0.212 tol=1.28
2024-07-12 00:31:58,627 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=59.9 pTM=0.361 ipTM=0.212 tol=1.12
2024-07-12 00:33:43,541 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=59.9 pTM=0.366 ipTM=0.214 tol=1.3
2024-07-12 00:35:31,273 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=59.9 pTM=0.368 ipTM=0.212 tol=1.08
2024-07-12 00:37:16,133 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=60.2 pTM=0.371 ipTM=0.212 tol=2.54
2024-07-12 00:39:00,994 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=60 pTM=0.371 ipTM=0.212 tol=2.35
2024-07-12 00:40:45,857 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.1 pTM=0.368 ipTM=0.21 tol=1.86
2024-07-12 00:42:30,745 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60.1 pTM=0.366 ipTM=0.211 tol=1.55
2024-07-12 00:44:15,632 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=59.9 pTM=0.367 ipTM=0.208 tol=1.08
2024-07-12 00:46:00,515 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=59.7 pTM=0.364 ipTM=0.209 tol=1.65
2024-07-12 00:47:45,423 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=59.8 pTM=0.356 ipTM=0.207 tol=3.28
2024-07-12 00:49:30,345 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=59.8 pTM=0.357 ipTM=0.207 tol=3.05
2024-07-12 00:51:15,228 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=59.8 pTM=0.359 ipTM=0.207 tol=3.59
2024-07-12 00:53:00,103 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=59.8 pTM=0.362 ipTM=0.209 tol=1.7
2024-07-12 00:54:45,020 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=59.8 pTM=0.363 ipTM=0.209 tol=3.1
2024-07-12 00:54:45,022 alphafold2_multimer_v3_model_1_seed_000 took 3414.1s (30 recycles)
2024-07-12 00:56:31,740 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=57.7 pTM=0.392 ipTM=0.213
2024-07-12 00:58:16,691 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=60.9 pTM=0.432 ipTM=0.239 tol=7.98
2024-07-12 01:00:01,681 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=61.1 pTM=0.422 ipTM=0.238 tol=6.43
2024-07-12 01:01:46,705 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=61.6 pTM=0.428 ipTM=0.235 tol=3.11
2024-07-12 01:03:31,715 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=61.7 pTM=0.428 ipTM=0.233 tol=3.29
2024-07-12 01:05:16,714 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=61.9 pTM=0.429 ipTM=0.232 tol=1.78
2024-07-12 01:07:01,706 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62 pTM=0.427 ipTM=0.23 tol=2.22
2024-07-12 01:08:46,684 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=62.2 pTM=0.427 ipTM=0.236 tol=1.93
2024-07-12 01:10:31,685 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62 pTM=0.428 ipTM=0.236 tol=1.89
2024-07-12 01:12:16,687 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=62 pTM=0.428 ipTM=0.233 tol=1.58
2024-07-12 01:14:01,683 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62.2 pTM=0.429 ipTM=0.234 tol=1.9
2024-07-12 01:15:46,667 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=62 pTM=0.425 ipTM=0.233 tol=1.92
2024-07-12 01:17:31,637 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=61.8 pTM=0.426 ipTM=0.236 tol=2.39
2024-07-12 01:19:16,617 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=61.9 pTM=0.426 ipTM=0.235 tol=2.74
2024-07-12 01:21:01,585 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=62 pTM=0.427 ipTM=0.234 tol=2.27
2024-07-12 01:22:46,554 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62 pTM=0.424 ipTM=0.231 tol=1.57
2024-07-12 01:24:31,534 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=61.9 pTM=0.426 ipTM=0.233 tol=1.42
2024-07-12 01:26:16,493 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62.1 pTM=0.432 ipTM=0.235 tol=1.25
2024-07-12 01:28:01,444 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=62 pTM=0.433 ipTM=0.238 tol=2.1
2024-07-12 01:29:46,346 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62 pTM=0.433 ipTM=0.236 tol=1.87
2024-07-12 01:31:31,296 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=61.9 pTM=0.429 ipTM=0.234 tol=2.16
2024-07-12 01:33:16,268 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=61.9 pTM=0.43 ipTM=0.235 tol=1.49
2024-07-12 01:35:01,229 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62.1 pTM=0.429 ipTM=0.234 tol=1.92
2024-07-12 01:36:46,206 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62 pTM=0.429 ipTM=0.235 tol=1.42
2024-07-12 01:38:31,189 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=61.8 pTM=0.427 ipTM=0.23 tol=1.73
2024-07-12 01:40:16,152 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=61.9 pTM=0.428 ipTM=0.235 tol=1.63
2024-07-12 01:42:01,039 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=61.9 pTM=0.423 ipTM=0.235 tol=1.41
2024-07-12 01:43:45,987 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=61.8 pTM=0.42 ipTM=0.236 tol=1.46
2024-07-12 01:45:30,934 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=61.9 pTM=0.421 ipTM=0.236 tol=1.15
2024-07-12 01:47:15,887 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=61.9 pTM=0.424 ipTM=0.237 tol=4.43
2024-07-12 01:49:00,852 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=61.9 pTM=0.433 ipTM=0.238 tol=2.48
2024-07-12 01:49:00,854 alphafold2_multimer_v3_model_2_seed_000 took 3254.0s (30 recycles)
2024-07-12 01:50:47,822 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=57 pTM=0.345 ipTM=0.251
2024-07-12 01:52:32,903 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=59.2 pTM=0.365 ipTM=0.214 tol=11.4
2024-07-12 01:54:17,880 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=60.4 pTM=0.419 ipTM=0.215 tol=6.27
2024-07-12 01:56:02,836 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=60.7 pTM=0.427 ipTM=0.223 tol=5.93
2024-07-12 01:57:47,821 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=60.7 pTM=0.429 ipTM=0.227 tol=4.06
2024-07-12 01:59:32,790 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=60.8 pTM=0.433 ipTM=0.232 tol=2.94
2024-07-12 02:01:17,756 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=60.8 pTM=0.434 ipTM=0.234 tol=2.74
2024-07-12 02:03:02,714 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=61.1 pTM=0.437 ipTM=0.236 tol=3.79
2024-07-12 02:04:47,691 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61.2 pTM=0.439 ipTM=0.236 tol=4.76
2024-07-12 02:06:32,666 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=61.6 pTM=0.446 ipTM=0.237 tol=2.66
2024-07-12 02:08:17,668 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=61.7 pTM=0.448 ipTM=0.238 tol=2.51
2024-07-12 02:10:02,617 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=61.5 pTM=0.446 ipTM=0.236 tol=2.05
2024-07-12 02:11:47,615 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=61.4 pTM=0.447 ipTM=0.234 tol=3.3
2024-07-12 02:13:32,597 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=61.5 pTM=0.449 ipTM=0.238 tol=3.37
2024-07-12 02:15:17,579 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=61.7 pTM=0.45 ipTM=0.241 tol=2.28
2024-07-12 02:17:02,565 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=61.8 pTM=0.451 ipTM=0.24 tol=2.1
2024-07-12 02:18:47,538 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=61.6 pTM=0.45 ipTM=0.239 tol=1.13
2024-07-12 02:20:32,537 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.6 pTM=0.452 ipTM=0.243 tol=1.82
2024-07-12 02:22:17,521 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.7 pTM=0.454 ipTM=0.243 tol=1.67
2024-07-12 02:24:02,524 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.7 pTM=0.453 ipTM=0.242 tol=1.34
2024-07-12 02:25:47,517 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=61.7 pTM=0.452 ipTM=0.241 tol=1.29
2024-07-12 02:27:32,497 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=61.6 pTM=0.451 ipTM=0.24 tol=1.21
2024-07-12 02:29:17,503 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61.7 pTM=0.45 ipTM=0.239 tol=1.58
2024-07-12 02:31:02,481 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=61.5 pTM=0.449 ipTM=0.239 tol=1.64
2024-07-12 02:32:47,474 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.6 pTM=0.449 ipTM=0.238 tol=1.4
2024-07-12 02:34:32,471 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.5 pTM=0.451 ipTM=0.242 tol=1.4
2024-07-12 02:36:17,449 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=61.7 pTM=0.45 ipTM=0.239 tol=1.6
2024-07-12 02:38:02,424 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=61.7 pTM=0.449 ipTM=0.239 tol=2.14
2024-07-12 02:39:47,418 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=61.5 pTM=0.448 ipTM=0.24 tol=1.71
2024-07-12 02:41:32,411 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=61.7 pTM=0.449 ipTM=0.24 tol=1.46
2024-07-12 02:43:17,369 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=61.7 pTM=0.449 ipTM=0.24 tol=1.88
2024-07-12 02:43:17,370 alphafold2_multimer_v3_model_3_seed_000 took 3254.7s (30 recycles)
2024-07-12 02:45:04,237 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=57.2 pTM=0.387 ipTM=0.213
2024-07-12 02:46:49,233 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=58.8 pTM=0.398 ipTM=0.214 tol=10.2
2024-07-12 02:48:34,252 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=59.4 pTM=0.393 ipTM=0.219 tol=5.17
2024-07-12 02:50:19,282 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=59.8 pTM=0.398 ipTM=0.288 tol=6.15
2024-07-12 02:52:04,314 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=59.5 pTM=0.398 ipTM=0.229 tol=6.52
2024-07-12 02:53:49,363 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=59.8 pTM=0.407 ipTM=0.22 tol=8.06
2024-07-12 02:55:34,404 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=59.5 pTM=0.396 ipTM=0.238 tol=4.79
2024-07-12 02:57:19,539 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=59.6 pTM=0.394 ipTM=0.261 tol=4.05
2024-07-12 02:59:04,584 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=59.9 pTM=0.399 ipTM=0.286 tol=4.11
2024-07-12 03:00:49,654 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=59.8 pTM=0.408 ipTM=0.223 tol=4.23
2024-07-12 03:02:34,774 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=60 pTM=0.405 ipTM=0.221 tol=4.62
2024-07-12 03:04:19,875 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=59.5 pTM=0.399 ipTM=0.225 tol=2.44
2024-07-12 03:06:04,981 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=59.6 pTM=0.4 ipTM=0.225 tol=2.25
2024-07-12 03:07:50,034 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=59.6 pTM=0.397 ipTM=0.228 tol=2.11
2024-07-12 03:09:35,088 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=59.7 pTM=0.395 ipTM=0.225 tol=4.68
2024-07-12 03:11:20,174 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=59.5 pTM=0.393 ipTM=0.223 tol=4.82
2024-07-12 03:13:05,283 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=59.5 pTM=0.395 ipTM=0.222 tol=2.71
2024-07-12 03:14:50,365 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=59.7 pTM=0.4 ipTM=0.226 tol=2.54
2024-07-12 03:16:35,428 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=59.7 pTM=0.398 ipTM=0.225 tol=2.01
2024-07-12 03:18:20,520 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=59.7 pTM=0.398 ipTM=0.22 tol=2.65
2024-07-12 03:20:05,639 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=59.8 pTM=0.401 ipTM=0.222 tol=2.6
2024-07-12 03:21:50,771 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=59.5 pTM=0.395 ipTM=0.223 tol=2.05
2024-07-12 03:23:35,889 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=59.7 pTM=0.397 ipTM=0.223 tol=2.17
2024-07-12 03:25:20,966 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=59.6 pTM=0.398 ipTM=0.225 tol=1.39
2024-07-12 03:27:06,099 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=59.6 pTM=0.397 ipTM=0.221 tol=4.14
2024-07-12 03:28:51,213 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=59.6 pTM=0.399 ipTM=0.226 tol=4.41
2024-07-12 03:30:36,345 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=59.6 pTM=0.394 ipTM=0.22 tol=1.68
2024-07-12 03:32:21,423 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=59.5 pTM=0.392 ipTM=0.221 tol=1.78
2024-07-12 03:34:06,522 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=59.3 pTM=0.389 ipTM=0.223 tol=1.42
2024-07-12 03:35:51,644 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=59.5 pTM=0.391 ipTM=0.219 tol=2.23
2024-07-12 03:37:36,731 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=59.6 pTM=0.398 ipTM=0.218 tol=1.81
2024-07-12 03:37:36,733 alphafold2_multimer_v3_model_4_seed_000 took 3257.6s (30 recycles)
2024-07-12 03:39:23,685 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=56.7 pTM=0.351 ipTM=0.198
2024-07-12 03:41:08,846 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=58.9 pTM=0.367 ipTM=0.211 tol=10.7
2024-07-12 03:42:53,927 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=60.5 pTM=0.425 ipTM=0.222 tol=7.32
2024-07-12 03:44:39,022 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=60.8 pTM=0.424 ipTM=0.226 tol=7.75
2024-07-12 03:46:24,059 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=60.9 pTM=0.425 ipTM=0.227 tol=2.88
2024-07-12 03:48:09,081 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=60.9 pTM=0.427 ipTM=0.228 tol=4.16
2024-07-12 03:49:54,122 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61.2 pTM=0.428 ipTM=0.229 tol=3.04
2024-07-12 03:51:39,209 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=61.2 pTM=0.429 ipTM=0.231 tol=4.21
2024-07-12 03:53:24,227 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61.3 pTM=0.433 ipTM=0.232 tol=3.65
2024-07-12 03:55:09,318 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=61.4 pTM=0.436 ipTM=0.23 tol=4.44
2024-07-12 03:56:54,369 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61.5 pTM=0.438 ipTM=0.232 tol=5.72
2024-07-12 03:58:39,401 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=61.5 pTM=0.439 ipTM=0.233 tol=3.06
2024-07-12 04:00:24,398 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=61.4 pTM=0.438 ipTM=0.23 tol=1.76
2024-07-12 04:02:09,409 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=61.5 pTM=0.438 ipTM=0.232 tol=2.4
2024-07-12 04:03:54,410 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=61.4 pTM=0.437 ipTM=0.232 tol=1.55
2024-07-12 04:05:39,419 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=61.3 pTM=0.437 ipTM=0.232 tol=1.9
2024-07-12 04:07:24,460 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=61.3 pTM=0.438 ipTM=0.231 tol=3.71
2024-07-12 04:09:09,474 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=61.3 pTM=0.439 ipTM=0.234 tol=3.37
2024-07-12 04:10:54,499 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.4 pTM=0.44 ipTM=0.231 tol=2.91
2024-07-12 04:12:39,543 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61.5 pTM=0.441 ipTM=0.23 tol=3.94
2024-07-12 04:14:24,529 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61.6 pTM=0.441 ipTM=0.232 tol=1.94
2024-07-12 04:16:09,503 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=61.4 pTM=0.438 ipTM=0.23 tol=4.07
2024-07-12 04:17:54,497 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61.5 pTM=0.438 ipTM=0.228 tol=2.9
2024-07-12 04:19:39,503 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61.6 pTM=0.44 ipTM=0.23 tol=2.15
2024-07-12 04:21:24,510 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61.2 pTM=0.436 ipTM=0.23 tol=2.27
2024-07-12 04:23:09,512 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61.3 pTM=0.439 ipTM=0.23 tol=1.95
2024-07-12 04:24:54,506 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=61.4 pTM=0.438 ipTM=0.228 tol=2.01
2024-07-12 04:26:39,451 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=61.3 pTM=0.437 ipTM=0.229 tol=2.12
2024-07-12 04:28:24,423 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.1 pTM=0.434 ipTM=0.23 tol=1.64
2024-07-12 04:30:09,406 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61.3 pTM=0.437 ipTM=0.231 tol=2.19
2024-07-12 04:31:54,406 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61.3 pTM=0.438 ipTM=0.233 tol=1.8
2024-07-12 04:31:54,408 alphafold2_multimer_v3_model_5_seed_000 took 3255.9s (30 recycles)
2024-07-12 04:31:56,197 reranking models by 'multimer' metric
2024-07-12 04:32:14,506 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 04:36:06,046 Relaxation took 249.8s
2024-07-12 04:36:06,046 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=61.7 pTM=0.449 ipTM=0.24
2024-07-12 04:40:00,824 Relaxation took 234.8s
2024-07-12 04:40:00,824 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=61.9 pTM=0.433 ipTM=0.238
2024-07-12 04:43:37,119 Relaxation took 216.3s
2024-07-12 04:43:37,119 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61.3 pTM=0.438 ipTM=0.233
2024-07-12 04:47:47,241 Relaxation took 250.1s
2024-07-12 04:47:47,241 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=59.6 pTM=0.398 ipTM=0.218
2024-07-12 04:52:59,891 Relaxation took 312.6s
2024-07-12 04:52:59,891 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=59.8 pTM=0.363 ipTM=0.209
2024-07-12 04:53:07,481 Done