2024-07-11 23:54:55,279 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-11 23:54:55,608 Running on GPU 2024-07-11 23:55:06,237 Found 6 citations for tools or databases 2024-07-11 23:55:06,237 Query 1/1: OPN3_S66AL (length 537) 2024-07-11 23:55:06,749 Sleeping for 8s. Reason: PENDING 2024-07-11 23:55:15,148 Sleeping for 7s. Reason: RUNNING 2024-07-11 23:55:22,562 Sleeping for 9s. Reason: RUNNING 2024-07-11 23:55:31,969 Sleeping for 9s. Reason: RUNNING 2024-07-11 23:55:41,390 Sleeping for 6s. Reason: RUNNING 2024-07-11 23:55:47,812 Sleeping for 5s. Reason: RUNNING 2024-07-11 23:55:53,259 Sleeping for 7s. Reason: RUNNING 2024-07-11 23:56:00,672 Sleeping for 7s. Reason: RUNNING 2024-07-11 23:56:08,152 Sleeping for 6s. Reason: RUNNING 2024-07-11 23:56:14,562 Sleeping for 10s. Reason: RUNNING 2024-07-11 23:56:24,981 Sleeping for 7s. Reason: RUNNING 2024-07-11 23:56:32,395 Sleeping for 6s. Reason: RUNNING 2024-07-11 23:56:38,827 Sleeping for 6s. Reason: RUNNING 2024-07-11 23:56:45,255 Sleeping for 9s. Reason: RUNNING 2024-07-11 23:56:54,699 Sleeping for 8s. Reason: RUNNING 2024-07-11 23:57:04,708 Sleeping for 7s. Reason: PENDING 2024-07-11 23:57:12,110 Sleeping for 5s. Reason: RUNNING 2024-07-11 23:57:17,510 Sleeping for 6s. Reason: RUNNING 2024-07-11 23:57:23,907 Sleeping for 5s. Reason: RUNNING 2024-07-11 23:57:29,308 Sleeping for 7s. Reason: RUNNING 2024-07-11 23:57:36,725 Sleeping for 8s. Reason: RUNNING 2024-07-11 23:57:45,140 Sleeping for 8s. Reason: RUNNING 2024-07-11 23:57:53,565 Sleeping for 9s. Reason: RUNNING 2024-07-11 23:58:02,973 Sleeping for 5s. Reason: RUNNING 2024-07-11 23:58:08,472 Sleeping for 8s. Reason: RUNNING 2024-07-11 23:58:18,450 Setting max_seq=508, max_extra_seq=2048 2024-07-12 00:01:53,975 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=59.2 pTM=0.576 ipTM=0.181 2024-07-12 00:02:00,036 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=57.6 pTM=0.559 ipTM=0.176 tol=10.5 2024-07-12 00:02:06,108 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=57.7 pTM=0.555 ipTM=0.169 tol=5.83 2024-07-12 00:02:12,180 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=57.2 pTM=0.555 ipTM=0.172 tol=2.23 2024-07-12 00:02:18,263 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=57.5 pTM=0.557 ipTM=0.173 tol=2.19 2024-07-12 00:02:24,355 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=57.8 pTM=0.56 ipTM=0.173 tol=1.4 2024-07-12 00:02:30,456 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=57.4 pTM=0.553 ipTM=0.167 tol=2.52 2024-07-12 00:02:36,553 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=58 pTM=0.561 ipTM=0.176 tol=2.05 2024-07-12 00:02:42,661 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=57.8 pTM=0.557 ipTM=0.169 tol=1.46 2024-07-12 00:02:48,770 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=57.8 pTM=0.56 ipTM=0.172 tol=1.96 2024-07-12 00:02:54,877 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=58 pTM=0.557 ipTM=0.166 tol=2.17 2024-07-12 00:03:00,990 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=57.8 pTM=0.558 ipTM=0.172 tol=1.22 2024-07-12 00:03:07,110 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=57.8 pTM=0.558 ipTM=0.171 tol=1.35 2024-07-12 00:03:13,232 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=58.1 pTM=0.56 ipTM=0.172 tol=0.825 2024-07-12 00:03:19,356 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=57.6 pTM=0.558 ipTM=0.172 tol=1.09 2024-07-12 00:03:25,485 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=58.5 pTM=0.562 ipTM=0.175 tol=1.31 2024-07-12 00:03:31,607 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=57.3 pTM=0.553 ipTM=0.17 tol=1.53 2024-07-12 00:03:37,734 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=57.8 pTM=0.556 ipTM=0.172 tol=1.21 2024-07-12 00:03:43,859 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=57.3 pTM=0.554 ipTM=0.173 tol=2.03 2024-07-12 00:03:49,988 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=57.6 pTM=0.556 ipTM=0.176 tol=1.16 2024-07-12 00:03:56,122 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=57.8 pTM=0.557 ipTM=0.173 tol=2 2024-07-12 00:04:02,257 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=58.2 pTM=0.56 ipTM=0.175 tol=1.43 2024-07-12 00:04:08,398 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=58 pTM=0.557 ipTM=0.172 tol=0.718 2024-07-12 00:04:14,522 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=57.8 pTM=0.556 ipTM=0.174 tol=1.79 2024-07-12 00:04:20,650 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=57.2 pTM=0.552 ipTM=0.172 tol=0.822 2024-07-12 00:04:26,784 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=57.5 pTM=0.554 ipTM=0.173 tol=1.98 2024-07-12 00:04:32,923 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=57.4 pTM=0.556 ipTM=0.171 tol=0.968 2024-07-12 00:04:39,062 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=57.2 pTM=0.553 ipTM=0.172 tol=2.25 2024-07-12 00:04:45,202 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=57.7 pTM=0.555 ipTM=0.171 tol=2.64 2024-07-12 00:04:51,338 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=58 pTM=0.558 ipTM=0.172 tol=1.42 2024-07-12 00:04:57,482 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=57.9 pTM=0.557 ipTM=0.172 tol=1.66 2024-07-12 00:04:57,482 alphafold2_multimer_v3_model_1_seed_000 took 351.6s (30 recycles) 2024-07-12 00:05:03,838 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=59.3 pTM=0.583 ipTM=0.18 2024-07-12 00:05:10,009 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=59.7 pTM=0.58 ipTM=0.177 tol=5.7 2024-07-12 00:05:16,166 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=59.5 pTM=0.575 ipTM=0.169 tol=4.34 2024-07-12 00:05:22,311 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=59.2 pTM=0.572 ipTM=0.167 tol=2.63 2024-07-12 00:05:28,468 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=60 pTM=0.579 ipTM=0.173 tol=1.65 2024-07-12 00:05:34,622 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=59.7 pTM=0.576 ipTM=0.171 tol=0.855 2024-07-12 00:05:40,771 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=59.7 pTM=0.571 ipTM=0.167 tol=2.29 2024-07-12 00:05:46,910 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=59.3 pTM=0.57 ipTM=0.168 tol=0.712 2024-07-12 00:05:53,047 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=58.9 pTM=0.568 ipTM=0.167 tol=2.27 2024-07-12 00:05:59,185 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=59.4 pTM=0.573 ipTM=0.172 tol=0.874 2024-07-12 00:06:05,328 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=59.5 pTM=0.574 ipTM=0.174 tol=0.957 2024-07-12 00:06:11,468 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=59.5 pTM=0.573 ipTM=0.171 tol=1.17 2024-07-12 00:06:17,611 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=59.6 pTM=0.575 ipTM=0.172 tol=0.942 2024-07-12 00:06:23,753 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=59.6 pTM=0.573 ipTM=0.172 tol=0.721 2024-07-12 00:06:29,895 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=59.8 pTM=0.576 ipTM=0.173 tol=1.04 2024-07-12 00:06:36,034 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=59.4 pTM=0.574 ipTM=0.172 tol=1.85 2024-07-12 00:06:42,169 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=59.3 pTM=0.57 ipTM=0.168 tol=1.69 2024-07-12 00:06:48,304 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=59.3 pTM=0.572 ipTM=0.17 tol=1.3 2024-07-12 00:06:54,446 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=59.3 pTM=0.573 ipTM=0.173 tol=0.596 2024-07-12 00:07:00,585 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=59.6 pTM=0.574 ipTM=0.174 tol=0.596 2024-07-12 00:07:06,728 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=59.5 pTM=0.572 ipTM=0.168 tol=0.911 2024-07-12 00:07:12,866 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=59.5 pTM=0.573 ipTM=0.174 tol=0.85 2024-07-12 00:07:19,006 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=59.5 pTM=0.574 ipTM=0.174 tol=0.524 2024-07-12 00:07:25,146 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=59.4 pTM=0.573 ipTM=0.173 tol=0.707 2024-07-12 00:07:31,276 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=58.5 pTM=0.568 ipTM=0.172 tol=1.29 2024-07-12 00:07:37,404 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=58.8 pTM=0.569 ipTM=0.171 tol=0.995 2024-07-12 00:07:43,542 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=59 pTM=0.571 ipTM=0.173 tol=0.804 2024-07-12 00:07:49,688 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=59.3 pTM=0.573 ipTM=0.172 tol=0.847 2024-07-12 00:07:55,826 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=59.4 pTM=0.573 ipTM=0.172 tol=1.08 2024-07-12 00:08:01,972 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=59.4 pTM=0.575 ipTM=0.172 tol=0.991 2024-07-12 00:08:08,114 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=59.4 pTM=0.572 ipTM=0.171 tol=0.499 2024-07-12 00:08:08,115 alphafold2_multimer_v3_model_2_seed_000 took 190.4s (30 recycles) 2024-07-12 00:08:15,874 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=60.9 pTM=0.592 ipTM=0.196 2024-07-12 00:08:22,033 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=59.8 pTM=0.577 ipTM=0.201 tol=6.57 2024-07-12 00:08:28,199 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=59.6 pTM=0.577 ipTM=0.205 tol=5.4 2024-07-12 00:08:34,345 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=59.1 pTM=0.572 ipTM=0.202 tol=4 2024-07-12 00:08:40,510 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59.8 pTM=0.582 ipTM=0.219 tol=3.27 2024-07-12 00:08:46,663 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=59.5 pTM=0.577 ipTM=0.216 tol=2.08 2024-07-12 00:08:52,824 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=60 pTM=0.582 ipTM=0.223 tol=1.38 2024-07-12 00:08:58,964 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=59.2 pTM=0.576 ipTM=0.224 tol=1.87 2024-07-12 00:09:05,116 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=59.9 pTM=0.582 ipTM=0.228 tol=1.04 2024-07-12 00:09:11,253 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=59.1 pTM=0.576 ipTM=0.227 tol=1.28 2024-07-12 00:09:17,397 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=59.4 pTM=0.581 ipTM=0.226 tol=1.49 2024-07-12 00:09:23,544 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=59.4 pTM=0.579 ipTM=0.221 tol=1.07 2024-07-12 00:09:29,694 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=59.9 pTM=0.583 ipTM=0.229 tol=1.34 2024-07-12 00:09:35,843 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=59.8 pTM=0.583 ipTM=0.224 tol=1.57 2024-07-12 00:09:41,990 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=59.6 pTM=0.582 ipTM=0.231 tol=1.08 2024-07-12 00:09:48,136 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=59.6 pTM=0.579 ipTM=0.218 tol=0.88 2024-07-12 00:09:54,267 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=58.8 pTM=0.575 ipTM=0.228 tol=1.04 2024-07-12 00:10:00,414 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=59.6 pTM=0.581 ipTM=0.223 tol=1.82 2024-07-12 00:10:06,552 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=59.3 pTM=0.579 ipTM=0.23 tol=0.899 2024-07-12 00:10:12,705 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=60.1 pTM=0.584 ipTM=0.228 tol=1.46 2024-07-12 00:10:18,849 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=59.5 pTM=0.579 ipTM=0.22 tol=1.55 2024-07-12 00:10:24,989 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=59.6 pTM=0.58 ipTM=0.224 tol=1.22 2024-07-12 00:10:31,142 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=59.9 pTM=0.584 ipTM=0.224 tol=2.38 2024-07-12 00:10:37,279 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=59.3 pTM=0.58 ipTM=0.219 tol=1.81 2024-07-12 00:10:43,409 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=59.2 pTM=0.577 ipTM=0.221 tol=1.27 2024-07-12 00:10:49,544 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=59.3 pTM=0.578 ipTM=0.224 tol=1.03 2024-07-12 00:10:55,688 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=59.4 pTM=0.58 ipTM=0.23 tol=1.59 2024-07-12 00:11:01,832 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=59.5 pTM=0.58 ipTM=0.224 tol=1.73 2024-07-12 00:11:07,975 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=59.5 pTM=0.579 ipTM=0.221 tol=2.29 2024-07-12 00:11:14,113 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=59.8 pTM=0.581 ipTM=0.226 tol=1.54 2024-07-12 00:11:20,263 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.1 pTM=0.584 ipTM=0.234 tol=1.92 2024-07-12 00:11:20,264 alphafold2_multimer_v3_model_3_seed_000 took 190.6s (30 recycles) 2024-07-12 00:11:26,643 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=59.6 pTM=0.591 ipTM=0.201 2024-07-12 00:11:32,808 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=58.9 pTM=0.58 ipTM=0.196 tol=6.21 2024-07-12 00:11:38,985 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=59.3 pTM=0.578 ipTM=0.196 tol=5.41 2024-07-12 00:11:45,139 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=58.4 pTM=0.571 ipTM=0.199 tol=2.37 2024-07-12 00:11:51,305 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=59.3 pTM=0.58 ipTM=0.211 tol=1.81 2024-07-12 00:11:57,475 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=59.3 pTM=0.58 ipTM=0.21 tol=1.01 2024-07-12 00:12:03,640 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=59.2 pTM=0.576 ipTM=0.204 tol=1.4 2024-07-12 00:12:09,802 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=59 pTM=0.578 ipTM=0.213 tol=1.58 2024-07-12 00:12:15,971 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=59 pTM=0.576 ipTM=0.208 tol=1.37 2024-07-12 00:12:22,132 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=59 pTM=0.578 ipTM=0.217 tol=2.78 2024-07-12 00:12:28,301 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=59.5 pTM=0.581 ipTM=0.216 tol=1.8 2024-07-12 00:12:34,456 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=58.6 pTM=0.574 ipTM=0.211 tol=1.63 2024-07-12 00:12:40,621 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=59.4 pTM=0.581 ipTM=0.219 tol=1.49 2024-07-12 00:12:46,782 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=59.1 pTM=0.579 ipTM=0.216 tol=1.9 2024-07-12 00:12:52,946 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=59.2 pTM=0.581 ipTM=0.22 tol=1.58 2024-07-12 00:12:59,110 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=59.3 pTM=0.583 ipTM=0.222 tol=1.39 2024-07-12 00:13:05,264 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=58.4 pTM=0.575 ipTM=0.213 tol=1.95 2024-07-12 00:13:11,422 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=58.9 pTM=0.579 ipTM=0.217 tol=1.07 2024-07-12 00:13:17,579 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=58.7 pTM=0.58 ipTM=0.224 tol=0.752 2024-07-12 00:13:23,741 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=59.1 pTM=0.576 ipTM=0.211 tol=1.09 2024-07-12 00:13:29,894 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=58.8 pTM=0.577 ipTM=0.22 tol=1.77 2024-07-12 00:13:36,054 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=59 pTM=0.578 ipTM=0.222 tol=1.16 2024-07-12 00:13:42,219 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=59.3 pTM=0.582 ipTM=0.219 tol=1.95 2024-07-12 00:13:48,378 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=58.9 pTM=0.577 ipTM=0.213 tol=1.37 2024-07-12 00:13:54,532 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=58.4 pTM=0.572 ipTM=0.209 tol=1.44 2024-07-12 00:14:00,693 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=59 pTM=0.578 ipTM=0.217 tol=1.74 2024-07-12 00:14:06,847 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=58.5 pTM=0.574 ipTM=0.216 tol=1.08 2024-07-12 00:14:13,013 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=58.9 pTM=0.576 ipTM=0.209 tol=1.14 2024-07-12 00:14:19,178 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=59.2 pTM=0.581 ipTM=0.224 tol=2.03 2024-07-12 00:14:25,351 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=59.3 pTM=0.579 ipTM=0.21 tol=1.51 2024-07-12 00:14:31,522 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=59.5 pTM=0.581 ipTM=0.221 tol=1.27 2024-07-12 00:14:31,523 alphafold2_multimer_v3_model_4_seed_000 took 191.1s (30 recycles) 2024-07-12 00:14:37,883 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=60.8 pTM=0.609 ipTM=0.28 2024-07-12 00:14:44,030 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=58.4 pTM=0.58 ipTM=0.194 tol=3.92 2024-07-12 00:14:50,188 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=58.8 pTM=0.574 ipTM=0.19 tol=3.89 2024-07-12 00:14:56,344 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=58.2 pTM=0.569 ipTM=0.177 tol=2.88 2024-07-12 00:15:02,515 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=58.7 pTM=0.572 ipTM=0.177 tol=0.845 2024-07-12 00:15:08,672 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=58.3 pTM=0.571 ipTM=0.181 tol=0.94 2024-07-12 00:15:14,831 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=58.5 pTM=0.567 ipTM=0.167 tol=2.01 2024-07-12 00:15:20,971 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=57.4 pTM=0.565 ipTM=0.181 tol=2.45 2024-07-12 00:15:27,126 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=58.3 pTM=0.568 ipTM=0.176 tol=1.84 2024-07-12 00:15:33,275 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=57.7 pTM=0.565 ipTM=0.173 tol=2 2024-07-12 00:15:39,434 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=57.7 pTM=0.567 ipTM=0.176 tol=1.7 2024-07-12 00:15:45,594 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=58.3 pTM=0.572 ipTM=0.194 tol=1.75 2024-07-12 00:15:51,750 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=58.2 pTM=0.568 ipTM=0.174 tol=1.83 2024-07-12 00:15:57,901 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=57.8 pTM=0.568 ipTM=0.18 tol=1.47 2024-07-12 00:16:04,047 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=57.9 pTM=0.57 ipTM=0.187 tol=1.65 2024-07-12 00:16:10,204 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=58.5 pTM=0.572 ipTM=0.185 tol=0.788 2024-07-12 00:16:16,357 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=57.8 pTM=0.569 ipTM=0.188 tol=1.99 2024-07-12 00:16:22,503 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=58.1 pTM=0.568 ipTM=0.173 tol=2.07 2024-07-12 00:16:28,659 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=57.7 pTM=0.57 ipTM=0.188 tol=1.53 2024-07-12 00:16:34,822 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=58.6 pTM=0.571 ipTM=0.175 tol=1.12 2024-07-12 00:16:40,971 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=57.7 pTM=0.566 ipTM=0.18 tol=1.56 2024-07-12 00:16:47,116 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=57.5 pTM=0.565 ipTM=0.172 tol=1.48 2024-07-12 00:16:53,280 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=58.5 pTM=0.574 ipTM=0.188 tol=1.47 2024-07-12 00:16:59,437 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=58.4 pTM=0.569 ipTM=0.171 tol=1.35 2024-07-12 00:17:05,592 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=58 pTM=0.572 ipTM=0.191 tol=1.37 2024-07-12 00:17:11,740 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=58.2 pTM=0.567 ipTM=0.171 tol=1.76 2024-07-12 00:17:17,893 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=58 pTM=0.568 ipTM=0.173 tol=1.65 2024-07-12 00:17:24,043 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=58.4 pTM=0.577 ipTM=0.205 tol=2.08 2024-07-12 00:17:30,199 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=58.6 pTM=0.574 ipTM=0.188 tol=1.83 2024-07-12 00:17:36,352 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=59 pTM=0.583 ipTM=0.227 tol=1.54 2024-07-12 00:17:42,504 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=58.8 pTM=0.577 ipTM=0.192 tol=1.82 2024-07-12 00:17:42,505 alphafold2_multimer_v3_model_5_seed_000 took 190.8s (30 recycles) 2024-07-12 00:17:42,699 reranking models by 'multimer' metric 2024-07-12 00:17:43,394 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-12 00:18:33,440 Relaxation took 50.7s 2024-07-12 00:18:33,440 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.1 pTM=0.584 ipTM=0.234 2024-07-12 00:19:00,876 Relaxation took 27.4s 2024-07-12 00:19:00,877 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=59.5 pTM=0.581 ipTM=0.221 2024-07-12 00:19:29,638 Relaxation took 28.8s 2024-07-12 00:19:29,638 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=58.8 pTM=0.577 ipTM=0.192 2024-07-12 00:20:00,771 Relaxation took 31.1s 2024-07-12 00:20:00,771 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=59.4 pTM=0.572 ipTM=0.171 2024-07-12 00:20:24,140 Relaxation took 23.4s 2024-07-12 00:20:24,140 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=57.9 pTM=0.557 ipTM=0.172 2024-07-12 00:20:25,193 Done