2024-07-12 01:10:29,845 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 01:10:30,185 Running on GPU
2024-07-12 01:10:43,112 Found 6 citations for tools or databases
2024-07-12 01:10:43,112 Query 1/1: OR2I1_TVB13 (length 440)
2024-07-12 01:10:43,562 Sleeping for 5s. Reason: PENDING
2024-07-12 01:10:48,979 Sleeping for 9s. Reason: RUNNING
2024-07-12 01:10:58,398 Sleeping for 5s. Reason: RUNNING
2024-07-12 01:11:03,822 Sleeping for 5s. Reason: RUNNING
2024-07-12 01:11:09,297 Sleeping for 7s. Reason: RUNNING
2024-07-12 01:11:16,707 Sleeping for 6s. Reason: RUNNING
2024-07-12 01:11:23,124 Sleeping for 5s. Reason: RUNNING
2024-07-12 01:11:28,544 Sleeping for 8s. Reason: RUNNING
2024-07-12 01:11:36,960 Sleeping for 10s. Reason: RUNNING
2024-07-12 01:11:47,366 Sleeping for 5s. Reason: RUNNING
2024-07-12 01:11:52,772 Sleeping for 8s. Reason: RUNNING
2024-07-12 01:12:01,210 Sleeping for 7s. Reason: RUNNING
2024-07-12 01:12:08,614 Sleeping for 5s. Reason: RUNNING
2024-07-12 01:12:14,027 Sleeping for 5s. Reason: RUNNING
2024-07-12 01:12:19,423 Sleeping for 10s. Reason: RUNNING
2024-07-12 01:12:29,870 Sleeping for 5s. Reason: RUNNING
2024-07-12 01:12:35,272 Sleeping for 10s. Reason: RUNNING
2024-07-12 01:12:48,789 Sleeping for 5s. Reason: PENDING
2024-07-12 01:12:54,189 Sleeping for 8s. Reason: RUNNING
2024-07-12 01:13:02,614 Sleeping for 6s. Reason: RUNNING
2024-07-12 01:13:09,027 Sleeping for 9s. Reason: RUNNING
2024-07-12 01:13:18,464 Sleeping for 9s. Reason: RUNNING
2024-07-12 01:13:27,886 Sleeping for 8s. Reason: RUNNING
2024-07-12 01:13:36,301 Sleeping for 5s. Reason: RUNNING
2024-07-12 01:13:41,725 Sleeping for 7s. Reason: RUNNING
2024-07-12 01:13:49,127 Sleeping for 9s. Reason: RUNNING
2024-07-12 01:13:58,524 Sleeping for 9s. Reason: RUNNING
2024-07-12 01:14:07,935 Sleeping for 8s. Reason: RUNNING
2024-07-12 01:14:16,369 Sleeping for 9s. Reason: RUNNING
2024-07-12 01:14:27,707 Setting max_seq=508, max_extra_seq=2048
2024-07-12 01:17:31,593 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=74.5 pTM=0.735 ipTM=0.388
2024-07-12 01:17:35,921 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=72.8 pTM=0.697 ipTM=0.263 tol=1.95
2024-07-12 01:17:40,240 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=71.4 pTM=0.688 ipTM=0.261 tol=0.969
2024-07-12 01:17:44,559 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=71.8 pTM=0.688 ipTM=0.267 tol=0.577
2024-07-12 01:17:48,877 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=71.9 pTM=0.688 ipTM=0.269 tol=0.276
2024-07-12 01:17:48,877 alphafold2_multimer_v3_model_1_seed_000 took 132.6s (4 recycles)
2024-07-12 01:17:53,397 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=77.1 pTM=0.744 ipTM=0.386
2024-07-12 01:17:57,747 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=76.5 pTM=0.712 ipTM=0.297 tol=1.2
2024-07-12 01:18:02,090 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=75.8 pTM=0.705 ipTM=0.271 tol=0.38
2024-07-12 01:18:02,090 alphafold2_multimer_v3_model_2_seed_000 took 13.1s (2 recycles)
2024-07-12 01:18:06,573 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=75.9 pTM=0.749 ipTM=0.435
2024-07-12 01:18:10,917 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=75.7 pTM=0.703 ipTM=0.268 tol=1.64
2024-07-12 01:18:15,245 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=75.4 pTM=0.707 ipTM=0.3 tol=0.484
2024-07-12 01:18:15,246 alphafold2_multimer_v3_model_3_seed_000 took 13.0s (2 recycles)
2024-07-12 01:18:19,750 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=75.4 pTM=0.777 ipTM=0.504
2024-07-12 01:18:24,111 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=74.6 pTM=0.729 ipTM=0.341 tol=1.99
2024-07-12 01:18:28,466 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=75.7 pTM=0.714 ipTM=0.298 tol=1.25
2024-07-12 01:18:32,818 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=76.1 pTM=0.723 ipTM=0.317 tol=0.969
2024-07-12 01:18:37,171 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=76.1 pTM=0.717 ipTM=0.302 tol=0.701
2024-07-12 01:18:41,522 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=76.4 pTM=0.724 ipTM=0.332 tol=0.382
2024-07-12 01:18:41,523 alphafold2_multimer_v3_model_4_seed_000 took 26.1s (5 recycles)
2024-07-12 01:18:46,010 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=74.4 pTM=0.721 ipTM=0.317
2024-07-12 01:18:50,361 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=75.5 pTM=0.705 ipTM=0.261 tol=1.49
2024-07-12 01:18:54,706 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=75.6 pTM=0.699 ipTM=0.243 tol=0.406
2024-07-12 01:18:54,706 alphafold2_multimer_v3_model_5_seed_000 took 13.0s (2 recycles)
2024-07-12 01:18:54,841 reranking models by 'multimer' metric
2024-07-12 01:19:23,039 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 01:19:44,301 Relaxation took 49.5s
2024-07-12 01:19:44,302 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=76.4 pTM=0.724 ipTM=0.332
2024-07-12 01:19:53,959 Relaxation took 9.7s
2024-07-12 01:19:53,960 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=75.4 pTM=0.707 ipTM=0.3
2024-07-12 01:20:02,678 Relaxation took 8.7s
2024-07-12 01:20:02,678 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=75.8 pTM=0.705 ipTM=0.271
2024-07-12 01:20:11,699 Relaxation took 9.0s
2024-07-12 01:20:11,699 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=71.9 pTM=0.688 ipTM=0.269
2024-07-12 01:20:22,598 Relaxation took 10.9s
2024-07-12 01:20:22,598 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=75.6 pTM=0.699 ipTM=0.243
2024-07-12 01:20:23,776 Done