2024-07-12 03:08:15,402 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 03:08:23,565 Running on GPU
2024-07-12 03:08:32,781 Found 6 citations for tools or databases
2024-07-12 03:08:32,781 Query 1/1: OR9Q1_RL10A (length 527)
2024-07-12 03:08:33,243 Sleeping for 7s. Reason: PENDING
2024-07-12 03:08:40,670 Sleeping for 10s. Reason: RUNNING
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2024-07-12 03:10:01,965 Sleeping for 9s. Reason: RUNNING
2024-07-12 03:10:13,194 Sleeping for 9s. Reason: PENDING
2024-07-12 03:10:22,651 Sleeping for 6s. Reason: RUNNING
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2024-07-12 03:10:36,499 Sleeping for 8s. Reason: RUNNING
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2024-07-12 03:11:03,808 Sleeping for 8s. Reason: RUNNING
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2024-07-12 03:11:18,675 Sleeping for 9s. Reason: RUNNING
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2024-07-12 03:11:33,523 Sleeping for 9s. Reason: RUNNING
2024-07-12 03:11:45,704 Setting max_seq=508, max_extra_seq=2048
2024-07-12 03:16:18,054 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=76.2 pTM=0.559 ipTM=0.146
2024-07-12 03:16:26,460 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=75 pTM=0.553 ipTM=0.145 tol=2.6
2024-07-12 03:16:34,867 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=74.5 pTM=0.549 ipTM=0.149 tol=4.47
2024-07-12 03:16:43,261 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=75.4 pTM=0.545 ipTM=0.155 tol=3.9
2024-07-12 03:16:51,655 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=76.3 pTM=0.552 ipTM=0.16 tol=1.13
2024-07-12 03:17:00,045 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=76.1 pTM=0.555 ipTM=0.167 tol=0.283
2024-07-12 03:17:00,046 alphafold2_multimer_v3_model_1_seed_000 took 266.8s (5 recycles)
2024-07-12 03:17:08,718 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=79 pTM=0.584 ipTM=0.19
2024-07-12 03:17:17,117 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=77 pTM=0.561 ipTM=0.168 tol=5.88
2024-07-12 03:17:25,522 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=77.6 pTM=0.554 ipTM=0.147 tol=1.49
2024-07-12 03:17:33,926 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=76.9 pTM=0.545 ipTM=0.145 tol=4.14
2024-07-12 03:17:42,330 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=76.9 pTM=0.548 ipTM=0.148 tol=1.31
2024-07-12 03:17:50,735 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=76.8 pTM=0.55 ipTM=0.149 tol=1.16
2024-07-12 03:17:59,138 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=77.1 pTM=0.547 ipTM=0.148 tol=0.787
2024-07-12 03:18:07,537 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=76.8 pTM=0.545 ipTM=0.145 tol=0.441
2024-07-12 03:18:07,538 alphafold2_multimer_v3_model_2_seed_000 took 67.2s (7 recycles)
2024-07-12 03:18:16,200 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=76.6 pTM=0.548 ipTM=0.135
2024-07-12 03:18:24,594 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=75.2 pTM=0.515 ipTM=0.115 tol=18.1
2024-07-12 03:18:32,987 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=75.1 pTM=0.549 ipTM=0.148 tol=19
2024-07-12 03:18:41,378 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=75.9 pTM=0.55 ipTM=0.154 tol=2.21
2024-07-12 03:18:49,768 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=76.1 pTM=0.553 ipTM=0.16 tol=1.36
2024-07-12 03:18:58,160 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=76.6 pTM=0.559 ipTM=0.166 tol=0.626
2024-07-12 03:19:06,554 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=76.4 pTM=0.555 ipTM=0.153 tol=0.611
2024-07-12 03:19:14,950 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=76.4 pTM=0.553 ipTM=0.153 tol=0.238
2024-07-12 03:19:14,951 alphafold2_multimer_v3_model_3_seed_000 took 67.1s (7 recycles)
2024-07-12 03:19:23,616 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=76.2 pTM=0.591 ipTM=0.216
2024-07-12 03:19:32,022 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=73.4 pTM=0.57 ipTM=0.169 tol=2.07
2024-07-12 03:19:40,432 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=73.8 pTM=0.579 ipTM=0.183 tol=3.45
2024-07-12 03:19:48,843 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=73.7 pTM=0.579 ipTM=0.184 tol=5.18
2024-07-12 03:19:57,259 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=75.1 pTM=0.576 ipTM=0.177 tol=5.78
2024-07-12 03:20:05,666 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=75.7 pTM=0.579 ipTM=0.186 tol=5.24
2024-07-12 03:20:14,074 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=75.8 pTM=0.578 ipTM=0.187 tol=3.75
2024-07-12 03:20:22,476 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=75.5 pTM=0.576 ipTM=0.182 tol=4.95
2024-07-12 03:20:30,885 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=76 pTM=0.579 ipTM=0.19 tol=4.61
2024-07-12 03:20:39,291 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=75.9 pTM=0.577 ipTM=0.186 tol=1.11
2024-07-12 03:20:47,698 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=76.4 pTM=0.579 ipTM=0.192 tol=1.53
2024-07-12 03:20:56,103 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=76 pTM=0.574 ipTM=0.187 tol=0.609
2024-07-12 03:21:04,505 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=75.9 pTM=0.579 ipTM=0.197 tol=0.748
2024-07-12 03:21:12,915 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=75.5 pTM=0.575 ipTM=0.184 tol=1.82
2024-07-12 03:21:21,321 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=75.7 pTM=0.576 ipTM=0.189 tol=2.47
2024-07-12 03:21:29,730 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=76 pTM=0.575 ipTM=0.186 tol=1.66
2024-07-12 03:21:38,132 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=76.4 pTM=0.577 ipTM=0.191 tol=1.75
2024-07-12 03:21:46,542 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=75.1 pTM=0.574 ipTM=0.182 tol=2.19
2024-07-12 03:21:54,945 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=75.4 pTM=0.574 ipTM=0.185 tol=1.03
2024-07-12 03:22:03,352 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=75.8 pTM=0.576 ipTM=0.185 tol=2.98
2024-07-12 03:22:11,760 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=74.9 pTM=0.575 ipTM=0.184 tol=4.04
2024-07-12 03:22:20,167 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=75.2 pTM=0.572 ipTM=0.176 tol=1.59
2024-07-12 03:22:28,575 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=75.8 pTM=0.577 ipTM=0.188 tol=2.14
2024-07-12 03:22:36,979 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=75.9 pTM=0.576 ipTM=0.188 tol=1.94
2024-07-12 03:22:45,385 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=75.2 pTM=0.573 ipTM=0.187 tol=0.592
2024-07-12 03:22:53,786 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=75.7 pTM=0.577 ipTM=0.194 tol=0.741
2024-07-12 03:23:02,190 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=75.4 pTM=0.575 ipTM=0.194 tol=0.306
2024-07-12 03:23:02,191 alphafold2_multimer_v3_model_4_seed_000 took 227.0s (26 recycles)
2024-07-12 03:23:10,848 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=75.8 pTM=0.593 ipTM=0.232
2024-07-12 03:23:19,239 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=75.2 pTM=0.58 ipTM=0.208 tol=1.18
2024-07-12 03:23:27,631 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=75.5 pTM=0.582 ipTM=0.207 tol=0.331
2024-07-12 03:23:27,632 alphafold2_multimer_v3_model_5_seed_000 took 25.2s (2 recycles)
2024-07-12 03:23:27,900 reranking models by 'multimer' metric
2024-07-12 03:23:37,929 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 03:23:59,857 Relaxation took 32.0s
2024-07-12 03:23:59,858 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=75.5 pTM=0.582 ipTM=0.207
2024-07-12 03:24:30,739 Relaxation took 30.9s
2024-07-12 03:24:30,740 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=75.4 pTM=0.575 ipTM=0.194
2024-07-12 03:25:00,731 Relaxation took 30.0s
2024-07-12 03:25:00,731 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=76.1 pTM=0.555 ipTM=0.167
2024-07-12 03:25:27,571 Relaxation took 26.8s
2024-07-12 03:25:27,571 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=76.4 pTM=0.553 ipTM=0.153
2024-07-12 03:26:19,543 Relaxation took 52.0s
2024-07-12 03:26:19,544 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=76.8 pTM=0.545 ipTM=0.145
2024-07-12 03:26:20,962 Done