2024-07-12 03:27:16,776 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-12 03:27:17,116 Running on GPU 2024-07-12 03:27:30,096 Found 6 citations for tools or databases 2024-07-12 03:27:30,096 Query 1/1: OVOL1_UMAS1 (length 429) 2024-07-12 03:27:30,571 Sleeping for 6s. Reason: PENDING 2024-07-12 03:27:36,998 Sleeping for 7s. Reason: RUNNING 2024-07-12 03:27:44,410 Sleeping for 9s. Reason: RUNNING 2024-07-12 03:27:53,814 Sleeping for 10s. Reason: RUNNING 2024-07-12 03:28:04,233 Sleeping for 10s. Reason: RUNNING 2024-07-12 03:28:14,640 Sleeping for 5s. Reason: RUNNING 2024-07-12 03:28:20,071 Sleeping for 9s. Reason: RUNNING 2024-07-12 03:28:29,491 Sleeping for 10s. Reason: RUNNING 2024-07-12 03:28:41,303 Sleeping for 10s. Reason: PENDING 2024-07-12 03:28:51,713 Sleeping for 6s. Reason: RUNNING 2024-07-12 03:28:58,127 Sleeping for 9s. Reason: RUNNING 2024-07-12 03:29:07,546 Sleeping for 10s. Reason: RUNNING 2024-07-12 03:29:19,104 Setting max_seq=508, max_extra_seq=1550 2024-07-12 03:32:52,373 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=37.5 pTM=0.285 ipTM=0.12 2024-07-12 03:32:56,518 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=40.4 pTM=0.344 ipTM=0.12 tol=10.5 2024-07-12 03:33:00,657 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=41.2 pTM=0.362 ipTM=0.115 tol=8.68 2024-07-12 03:33:04,791 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=41 pTM=0.37 ipTM=0.121 tol=5.09 2024-07-12 03:33:08,925 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=41.9 pTM=0.376 ipTM=0.124 tol=4.28 2024-07-12 03:33:13,060 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=41.8 pTM=0.379 ipTM=0.125 tol=3.14 2024-07-12 03:33:17,193 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=41.6 pTM=0.38 ipTM=0.129 tol=2.35 2024-07-12 03:33:21,326 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=42.2 pTM=0.38 ipTM=0.123 tol=3.81 2024-07-12 03:33:25,457 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=41.5 pTM=0.381 ipTM=0.128 tol=1.98 2024-07-12 03:33:29,589 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=41.9 pTM=0.385 ipTM=0.129 tol=1.86 2024-07-12 03:33:33,722 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=41.7 pTM=0.385 ipTM=0.129 tol=2.11 2024-07-12 03:33:37,854 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=41.6 pTM=0.383 ipTM=0.13 tol=2.03 2024-07-12 03:33:41,987 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=41.8 pTM=0.382 ipTM=0.124 tol=3.11 2024-07-12 03:33:46,121 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=41.9 pTM=0.382 ipTM=0.126 tol=2.81 2024-07-12 03:33:50,258 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=42.1 pTM=0.384 ipTM=0.124 tol=1.7 2024-07-12 03:33:54,394 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=42 pTM=0.384 ipTM=0.125 tol=1.85 2024-07-12 03:33:58,527 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=41.5 pTM=0.384 ipTM=0.13 tol=4.3 2024-07-12 03:34:02,662 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=41.8 pTM=0.379 ipTM=0.124 tol=2.27 2024-07-12 03:34:06,799 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=41.6 pTM=0.38 ipTM=0.125 tol=2.28 2024-07-12 03:34:10,935 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=41.8 pTM=0.382 ipTM=0.128 tol=2.21 2024-07-12 03:34:15,073 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=41.7 pTM=0.38 ipTM=0.127 tol=1.52 2024-07-12 03:34:19,212 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=41.7 pTM=0.381 ipTM=0.129 tol=1.55 2024-07-12 03:34:23,355 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=42 pTM=0.382 ipTM=0.13 tol=1.31 2024-07-12 03:34:27,497 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=41.9 pTM=0.379 ipTM=0.128 tol=1.62 2024-07-12 03:34:31,641 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=42.3 pTM=0.382 ipTM=0.132 tol=3.47 2024-07-12 03:34:35,779 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=41.1 pTM=0.379 ipTM=0.132 tol=3.75 2024-07-12 03:34:39,922 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=41.2 pTM=0.377 ipTM=0.131 tol=3.02 2024-07-12 03:34:44,066 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=41.5 pTM=0.381 ipTM=0.135 tol=2.96 2024-07-12 03:34:48,211 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=41.5 pTM=0.381 ipTM=0.136 tol=2.69 2024-07-12 03:34:52,352 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=41.6 pTM=0.382 ipTM=0.134 tol=3.32 2024-07-12 03:34:56,492 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=41.6 pTM=0.381 ipTM=0.133 tol=2.53 2024-07-12 03:34:56,493 alphafold2_multimer_v3_model_1_seed_000 took 297.6s (30 recycles) 2024-07-12 03:35:00,792 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=39 pTM=0.331 ipTM=0.118 2024-07-12 03:35:04,952 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=40.1 pTM=0.345 ipTM=0.11 tol=13.9 2024-07-12 03:35:09,099 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=40.9 pTM=0.357 ipTM=0.118 tol=6.32 2024-07-12 03:35:13,244 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=40.9 pTM=0.359 ipTM=0.122 tol=3.18 2024-07-12 03:35:17,386 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=41.2 pTM=0.362 ipTM=0.123 tol=3.39 2024-07-12 03:35:21,526 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=40.5 pTM=0.361 ipTM=0.125 tol=3.24 2024-07-12 03:35:25,665 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=40.5 pTM=0.361 ipTM=0.125 tol=2.56 2024-07-12 03:35:29,803 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=40.7 pTM=0.36 ipTM=0.124 tol=1.91 2024-07-12 03:35:33,942 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=40.8 pTM=0.362 ipTM=0.127 tol=1.79 2024-07-12 03:35:38,079 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=40.8 pTM=0.361 ipTM=0.127 tol=1.73 2024-07-12 03:35:42,230 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=40.7 pTM=0.361 ipTM=0.127 tol=1.61 2024-07-12 03:35:46,375 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=40.8 pTM=0.362 ipTM=0.129 tol=1.53 2024-07-12 03:35:50,523 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=41.2 pTM=0.361 ipTM=0.124 tol=1.85 2024-07-12 03:35:54,671 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=41.1 pTM=0.363 ipTM=0.123 tol=1.48 2024-07-12 03:35:58,817 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=40.9 pTM=0.36 ipTM=0.124 tol=1.67 2024-07-12 03:36:02,966 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=41.2 pTM=0.363 ipTM=0.126 tol=1.84 2024-07-12 03:36:07,112 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=40.8 pTM=0.361 ipTM=0.128 tol=2.47 2024-07-12 03:36:11,259 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=41.1 pTM=0.359 ipTM=0.124 tol=2.87 2024-07-12 03:36:15,405 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=41 pTM=0.359 ipTM=0.125 tol=1.54 2024-07-12 03:36:19,550 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=41 pTM=0.36 ipTM=0.127 tol=1.82 2024-07-12 03:36:23,695 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=41.2 pTM=0.362 ipTM=0.126 tol=1.69 2024-07-12 03:36:27,842 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=40.7 pTM=0.36 ipTM=0.129 tol=2.76 2024-07-12 03:36:31,986 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=40.9 pTM=0.361 ipTM=0.127 tol=3.25 2024-07-12 03:36:36,134 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=41 pTM=0.36 ipTM=0.127 tol=2 2024-07-12 03:36:40,279 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=41.1 pTM=0.361 ipTM=0.127 tol=3.15 2024-07-12 03:36:44,422 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=40.8 pTM=0.36 ipTM=0.13 tol=2.29 2024-07-12 03:36:48,566 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=40.8 pTM=0.359 ipTM=0.13 tol=1.48 2024-07-12 03:36:52,713 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=40.8 pTM=0.358 ipTM=0.128 tol=1.76 2024-07-12 03:36:56,857 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=40.8 pTM=0.359 ipTM=0.128 tol=2.18 2024-07-12 03:37:01,001 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=40.9 pTM=0.359 ipTM=0.126 tol=1.86 2024-07-12 03:37:05,146 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=41.2 pTM=0.36 ipTM=0.128 tol=1.69 2024-07-12 03:37:05,147 alphafold2_multimer_v3_model_2_seed_000 took 128.5s (30 recycles) 2024-07-12 03:37:09,457 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=40.8 pTM=0.32 ipTM=0.127 2024-07-12 03:37:13,639 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=42.1 pTM=0.342 ipTM=0.117 tol=10.6 2024-07-12 03:37:17,825 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=42.3 pTM=0.342 ipTM=0.117 tol=7.92 2024-07-12 03:37:22,012 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=42.3 pTM=0.342 ipTM=0.112 tol=7.69 2024-07-12 03:37:26,201 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=42.6 pTM=0.344 ipTM=0.112 tol=4.7 2024-07-12 03:37:30,392 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=42.6 pTM=0.345 ipTM=0.11 tol=3.24 2024-07-12 03:37:34,580 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=42.3 pTM=0.346 ipTM=0.112 tol=4.78 2024-07-12 03:37:38,767 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=42.8 pTM=0.349 ipTM=0.113 tol=5.32 2024-07-12 03:37:42,953 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=42.7 pTM=0.35 ipTM=0.115 tol=4.16 2024-07-12 03:37:47,139 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=42.7 pTM=0.352 ipTM=0.119 tol=2.79 2024-07-12 03:37:51,325 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=42.7 pTM=0.352 ipTM=0.118 tol=2.33 2024-07-12 03:37:55,510 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=42.6 pTM=0.353 ipTM=0.119 tol=2.74 2024-07-12 03:37:59,698 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=42.7 pTM=0.354 ipTM=0.123 tol=6.8 2024-07-12 03:38:03,887 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=42.8 pTM=0.354 ipTM=0.121 tol=3.22 2024-07-12 03:38:08,078 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=43 pTM=0.356 ipTM=0.123 tol=1.65 2024-07-12 03:38:12,266 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=43 pTM=0.356 ipTM=0.119 tol=1.59 2024-07-12 03:38:16,455 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=42.8 pTM=0.354 ipTM=0.119 tol=2.56 2024-07-12 03:38:20,642 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=42.8 pTM=0.354 ipTM=0.122 tol=2.84 2024-07-12 03:38:24,831 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=42.6 pTM=0.353 ipTM=0.119 tol=2.43 2024-07-12 03:38:29,019 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=42.8 pTM=0.354 ipTM=0.121 tol=2.15 2024-07-12 03:38:33,206 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=42.7 pTM=0.355 ipTM=0.121 tol=1.4 2024-07-12 03:38:37,395 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=42.5 pTM=0.354 ipTM=0.122 tol=2.15 2024-07-12 03:38:41,585 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=42.5 pTM=0.353 ipTM=0.116 tol=2.38 2024-07-12 03:38:45,775 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=42.3 pTM=0.352 ipTM=0.118 tol=2.53 2024-07-12 03:38:49,963 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=42.6 pTM=0.353 ipTM=0.116 tol=2.65 2024-07-12 03:38:54,150 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=42.3 pTM=0.351 ipTM=0.118 tol=2.69 2024-07-12 03:38:58,338 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=42.4 pTM=0.352 ipTM=0.117 tol=1.64 2024-07-12 03:39:02,527 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=42.4 pTM=0.352 ipTM=0.118 tol=2.83 2024-07-12 03:39:06,716 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=42.4 pTM=0.351 ipTM=0.114 tol=2.2 2024-07-12 03:39:10,902 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=42.6 pTM=0.352 ipTM=0.119 tol=1.6 2024-07-12 03:39:15,093 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=42.6 pTM=0.352 ipTM=0.118 tol=1.06 2024-07-12 03:39:15,094 alphafold2_multimer_v3_model_3_seed_000 took 129.8s (30 recycles) 2024-07-12 03:39:19,390 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=40.6 pTM=0.336 ipTM=0.15 2024-07-12 03:39:23,562 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=43.1 pTM=0.367 ipTM=0.141 tol=8.73 2024-07-12 03:39:27,720 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=43.7 pTM=0.377 ipTM=0.147 tol=6.52 2024-07-12 03:39:31,879 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=43.6 pTM=0.381 ipTM=0.142 tol=4.66 2024-07-12 03:39:36,037 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=43.9 pTM=0.383 ipTM=0.144 tol=2.75 2024-07-12 03:39:40,194 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=43.8 pTM=0.383 ipTM=0.144 tol=2.95 2024-07-12 03:39:44,348 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=43.4 pTM=0.377 ipTM=0.139 tol=2.62 2024-07-12 03:39:48,506 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=44 pTM=0.378 ipTM=0.136 tol=2.68 2024-07-12 03:39:52,663 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=43.8 pTM=0.378 ipTM=0.138 tol=2.22 2024-07-12 03:39:56,821 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=43.7 pTM=0.381 ipTM=0.141 tol=3.35 2024-07-12 03:40:00,979 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=43.5 pTM=0.378 ipTM=0.135 tol=2.71 2024-07-12 03:40:05,134 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=43.8 pTM=0.382 ipTM=0.141 tol=1.02 2024-07-12 03:40:09,289 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=43.6 pTM=0.382 ipTM=0.139 tol=2.01 2024-07-12 03:40:13,447 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=43.8 pTM=0.377 ipTM=0.131 tol=2.12 2024-07-12 03:40:17,604 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=43.8 pTM=0.383 ipTM=0.141 tol=1.21 2024-07-12 03:40:21,761 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=43.8 pTM=0.38 ipTM=0.135 tol=1.36 2024-07-12 03:40:25,914 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=43.5 pTM=0.378 ipTM=0.133 tol=1.61 2024-07-12 03:40:30,069 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=43.5 pTM=0.378 ipTM=0.137 tol=1.58 2024-07-12 03:40:34,224 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=43.3 pTM=0.378 ipTM=0.137 tol=1.23 2024-07-12 03:40:38,379 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=43.2 pTM=0.378 ipTM=0.138 tol=1.95 2024-07-12 03:40:42,532 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=43.1 pTM=0.377 ipTM=0.135 tol=1.28 2024-07-12 03:40:46,689 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=43.1 pTM=0.38 ipTM=0.139 tol=1.81 2024-07-12 03:40:50,847 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=43 pTM=0.375 ipTM=0.131 tol=2.66 2024-07-12 03:40:55,006 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=43.1 pTM=0.377 ipTM=0.132 tol=1.67 2024-07-12 03:40:59,162 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=43.1 pTM=0.375 ipTM=0.132 tol=1.65 2024-07-12 03:41:03,318 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=43 pTM=0.372 ipTM=0.131 tol=1.71 2024-07-12 03:41:07,476 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=43.1 pTM=0.374 ipTM=0.13 tol=2.22 2024-07-12 03:41:11,634 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=43 pTM=0.376 ipTM=0.134 tol=1.78 2024-07-12 03:41:15,790 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=42.7 pTM=0.375 ipTM=0.132 tol=2.53 2024-07-12 03:41:19,943 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=42.8 pTM=0.375 ipTM=0.134 tol=1.53 2024-07-12 03:41:24,099 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=43.1 pTM=0.375 ipTM=0.134 tol=1.95 2024-07-12 03:41:24,099 alphafold2_multimer_v3_model_4_seed_000 took 128.9s (30 recycles) 2024-07-12 03:41:28,419 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=37.3 pTM=0.303 ipTM=0.12 2024-07-12 03:41:32,599 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=40.5 pTM=0.351 ipTM=0.128 tol=14.8 2024-07-12 03:41:36,767 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=40.5 pTM=0.356 ipTM=0.138 tol=6.89 2024-07-12 03:41:40,933 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=41.1 pTM=0.362 ipTM=0.136 tol=5.19 2024-07-12 03:41:45,097 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=41.6 pTM=0.37 ipTM=0.146 tol=3.9 2024-07-12 03:41:49,257 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=41.6 pTM=0.372 ipTM=0.142 tol=4.04 2024-07-12 03:41:53,415 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=41.2 pTM=0.371 ipTM=0.142 tol=1.81 2024-07-12 03:41:57,578 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=41.9 pTM=0.373 ipTM=0.14 tol=2.27 2024-07-12 03:42:01,737 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=41.8 pTM=0.373 ipTM=0.141 tol=2.52 2024-07-12 03:42:05,893 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=41.7 pTM=0.374 ipTM=0.142 tol=2.12 2024-07-12 03:42:10,054 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=41.5 pTM=0.371 ipTM=0.139 tol=3.42 2024-07-12 03:42:14,213 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=41.5 pTM=0.371 ipTM=0.141 tol=2.49 2024-07-12 03:42:18,371 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=41.7 pTM=0.375 ipTM=0.147 tol=2.15 2024-07-12 03:42:22,530 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=41.7 pTM=0.372 ipTM=0.143 tol=2.95 2024-07-12 03:42:26,692 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=41.9 pTM=0.374 ipTM=0.146 tol=1.36 2024-07-12 03:42:30,853 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=41.7 pTM=0.373 ipTM=0.142 tol=1.43 2024-07-12 03:42:35,010 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=41.6 pTM=0.373 ipTM=0.147 tol=3.06 2024-07-12 03:42:39,166 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=41.6 pTM=0.374 ipTM=0.149 tol=3.25 2024-07-12 03:42:43,323 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=41.7 pTM=0.375 ipTM=0.147 tol=2.84 2024-07-12 03:42:47,484 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=41.7 pTM=0.373 ipTM=0.15 tol=2.42 2024-07-12 03:42:51,642 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=41.7 pTM=0.373 ipTM=0.147 tol=1.97 2024-07-12 03:42:55,798 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=41.3 pTM=0.371 ipTM=0.147 tol=2.4 2024-07-12 03:42:59,958 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=41.3 pTM=0.37 ipTM=0.145 tol=2.88 2024-07-12 03:43:04,117 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=41.2 pTM=0.367 ipTM=0.143 tol=2.69 2024-07-12 03:43:08,277 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=41.7 pTM=0.372 ipTM=0.147 tol=2.06 2024-07-12 03:43:12,431 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=40.8 pTM=0.366 ipTM=0.144 tol=3.28 2024-07-12 03:43:16,586 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=41.2 pTM=0.368 ipTM=0.146 tol=4.7 2024-07-12 03:43:20,743 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=40.7 pTM=0.364 ipTM=0.14 tol=3.69 2024-07-12 03:43:24,900 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=41.2 pTM=0.367 ipTM=0.139 tol=2.74 2024-07-12 03:43:29,054 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=41 pTM=0.368 ipTM=0.14 tol=2.24 2024-07-12 03:43:33,211 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=41.2 pTM=0.368 ipTM=0.144 tol=2.61 2024-07-12 03:43:33,211 alphafold2_multimer_v3_model_5_seed_000 took 129.0s (30 recycles) 2024-07-12 03:43:33,343 reranking models by 'multimer' metric 2024-07-12 03:43:39,698 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-12 03:44:02,563 Relaxation took 29.2s 2024-07-12 03:44:02,563 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=41.2 pTM=0.368 ipTM=0.144 2024-07-12 03:44:16,687 Relaxation took 14.1s 2024-07-12 03:44:16,687 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=43.1 pTM=0.375 ipTM=0.134 2024-07-12 03:44:49,149 Relaxation took 32.5s 2024-07-12 03:44:49,149 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=41.6 pTM=0.381 ipTM=0.133 2024-07-12 03:45:03,906 Relaxation took 14.8s 2024-07-12 03:45:03,906 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=41.2 pTM=0.36 ipTM=0.128 2024-07-12 03:45:33,317 Relaxation took 29.4s 2024-07-12 03:45:33,317 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=42.6 pTM=0.352 ipTM=0.118 2024-07-12 03:45:34,237 Done