2024-07-12 03:48:40,681 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 03:48:41,039 Running on GPU
2024-07-12 03:49:01,497 Found 6 citations for tools or databases
2024-07-12 03:49:01,497 Query 1/1: P5F1B_CRYGS (length 537)
2024-07-12 03:49:01,970 Sleeping for 5s. Reason: PENDING
2024-07-12 03:49:07,382 Sleeping for 10s. Reason: RUNNING
2024-07-12 03:49:17,799 Sleeping for 5s. Reason: RUNNING
2024-07-12 03:49:23,224 Sleeping for 5s. Reason: RUNNING
2024-07-12 03:49:28,642 Sleeping for 6s. Reason: RUNNING
2024-07-12 03:49:35,047 Sleeping for 9s. Reason: RUNNING
2024-07-12 03:49:44,469 Sleeping for 5s. Reason: RUNNING
2024-07-12 03:49:49,883 Sleeping for 6s. Reason: RUNNING
2024-07-12 03:49:57,881 Sleeping for 5s. Reason: PENDING
2024-07-12 03:50:03,306 Sleeping for 6s. Reason: RUNNING
2024-07-12 03:50:09,724 Sleeping for 7s. Reason: RUNNING
2024-07-12 03:50:17,156 Sleeping for 9s. Reason: RUNNING
2024-07-12 03:50:26,595 Sleeping for 6s. Reason: RUNNING
2024-07-12 03:50:33,014 Sleeping for 9s. Reason: RUNNING
2024-07-12 03:50:46,276 Setting max_seq=508, max_extra_seq=2048
2024-07-12 03:54:49,212 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=56.2 pTM=0.364 ipTM=0.214
2024-07-12 03:54:55,274 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=62 pTM=0.516 ipTM=0.73 tol=10.3
2024-07-12 03:55:01,329 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=60.5 pTM=0.475 ipTM=0.605 tol=3.58
2024-07-12 03:55:07,390 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=59 pTM=0.427 ipTM=0.447 tol=2.77
2024-07-12 03:55:13,467 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=59.4 pTM=0.434 ipTM=0.453 tol=2.84
2024-07-12 03:55:19,542 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=58.3 pTM=0.391 ipTM=0.307 tol=2.69
2024-07-12 03:55:25,627 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=56.5 pTM=0.354 ipTM=0.145 tol=7
2024-07-12 03:55:31,716 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=56.4 pTM=0.359 ipTM=0.129 tol=9.78
2024-07-12 03:55:37,808 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=56.2 pTM=0.361 ipTM=0.133 tol=4.3
2024-07-12 03:55:43,887 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=56.8 pTM=0.363 ipTM=0.134 tol=2.87
2024-07-12 03:55:49,982 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=56.5 pTM=0.363 ipTM=0.136 tol=5.03
2024-07-12 03:55:56,088 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=56.4 pTM=0.364 ipTM=0.142 tol=3.15
2024-07-12 03:56:02,189 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=56.1 pTM=0.365 ipTM=0.139 tol=4.38
2024-07-12 03:56:08,300 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=56.1 pTM=0.365 ipTM=0.132 tol=4.43
2024-07-12 03:56:14,414 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=56.3 pTM=0.366 ipTM=0.134 tol=2.81
2024-07-12 03:56:20,516 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=56.4 pTM=0.365 ipTM=0.135 tol=4.46
2024-07-12 03:56:26,612 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=56.3 pTM=0.365 ipTM=0.137 tol=3
2024-07-12 03:56:32,722 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=56.4 pTM=0.366 ipTM=0.132 tol=2.71
2024-07-12 03:56:38,826 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=56.2 pTM=0.366 ipTM=0.137 tol=3.42
2024-07-12 03:56:44,924 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=56.8 pTM=0.367 ipTM=0.142 tol=3.98
2024-07-12 03:56:51,033 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=56.3 pTM=0.367 ipTM=0.14 tol=4.08
2024-07-12 03:56:57,146 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=56.4 pTM=0.366 ipTM=0.134 tol=2.6
2024-07-12 03:57:03,250 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=56.3 pTM=0.366 ipTM=0.137 tol=3.83
2024-07-12 03:57:09,364 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=56.1 pTM=0.363 ipTM=0.13 tol=4.14
2024-07-12 03:57:15,478 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=55.7 pTM=0.365 ipTM=0.133 tol=3.09
2024-07-12 03:57:21,587 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=56.3 pTM=0.366 ipTM=0.137 tol=7.42
2024-07-12 03:57:27,704 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=56.3 pTM=0.369 ipTM=0.145 tol=5.68
2024-07-12 03:57:33,816 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=56.5 pTM=0.369 ipTM=0.151 tol=4.66
2024-07-12 03:57:39,921 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=56.5 pTM=0.37 ipTM=0.16 tol=2.87
2024-07-12 03:57:46,028 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=56.7 pTM=0.372 ipTM=0.165 tol=2.32
2024-07-12 03:57:52,141 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=57.2 pTM=0.373 ipTM=0.171 tol=1.78
2024-07-12 03:57:52,142 alphafold2_multimer_v3_model_1_seed_000 took 357.0s (30 recycles)
2024-07-12 03:57:58,444 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=56 pTM=0.357 ipTM=0.133
2024-07-12 03:58:04,554 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=55.6 pTM=0.362 ipTM=0.124 tol=12.2
2024-07-12 03:58:10,685 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=56.1 pTM=0.366 ipTM=0.121 tol=12.5
2024-07-12 03:58:16,819 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=56.5 pTM=0.365 ipTM=0.127 tol=7.3
2024-07-12 03:58:22,945 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=57.1 pTM=0.368 ipTM=0.132 tol=7.33
2024-07-12 03:58:29,070 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=57 pTM=0.367 ipTM=0.129 tol=9.98
2024-07-12 03:58:35,192 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=56.8 pTM=0.367 ipTM=0.131 tol=9.22
2024-07-12 03:58:41,316 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=57.4 pTM=0.368 ipTM=0.13 tol=7.84
2024-07-12 03:58:47,443 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=57.4 pTM=0.369 ipTM=0.133 tol=4.02
2024-07-12 03:58:53,568 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=57.5 pTM=0.367 ipTM=0.132 tol=2.97
2024-07-12 03:58:59,685 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=57.1 pTM=0.367 ipTM=0.135 tol=1.95
2024-07-12 03:59:05,804 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=57.2 pTM=0.368 ipTM=0.14 tol=3.57
2024-07-12 03:59:11,926 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=56.8 pTM=0.368 ipTM=0.14 tol=4.9
2024-07-12 03:59:18,048 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=56.9 pTM=0.37 ipTM=0.145 tol=2.77
2024-07-12 03:59:24,174 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=57.3 pTM=0.37 ipTM=0.142 tol=4.22
2024-07-12 03:59:30,297 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=57 pTM=0.37 ipTM=0.15 tol=3.5
2024-07-12 03:59:36,422 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=57 pTM=0.37 ipTM=0.15 tol=6.32
2024-07-12 03:59:42,567 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=57.2 pTM=0.37 ipTM=0.145 tol=6.28
2024-07-12 03:59:48,711 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=56.8 pTM=0.37 ipTM=0.149 tol=3.84
2024-07-12 03:59:54,882 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=57.3 pTM=0.373 ipTM=0.155 tol=3.53
2024-07-12 04:00:01,030 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=57.2 pTM=0.372 ipTM=0.152 tol=4.05
2024-07-12 04:00:07,166 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=57.1 pTM=0.374 ipTM=0.155 tol=5.02
2024-07-12 04:00:13,296 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=56.8 pTM=0.374 ipTM=0.16 tol=5.27
2024-07-12 04:00:19,433 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=56.4 pTM=0.369 ipTM=0.154 tol=6.28
2024-07-12 04:00:25,562 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=56.2 pTM=0.371 ipTM=0.155 tol=6.92
2024-07-12 04:00:31,691 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=56.6 pTM=0.37 ipTM=0.15 tol=4.04
2024-07-12 04:00:37,821 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=56.2 pTM=0.371 ipTM=0.15 tol=4.43
2024-07-12 04:00:43,950 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=56.4 pTM=0.371 ipTM=0.153 tol=1.84
2024-07-12 04:00:50,076 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=56.5 pTM=0.37 ipTM=0.149 tol=2.02
2024-07-12 04:00:56,205 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=56.6 pTM=0.372 ipTM=0.155 tol=4.14
2024-07-12 04:01:02,331 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=56.6 pTM=0.37 ipTM=0.154 tol=4.05
2024-07-12 04:01:02,332 alphafold2_multimer_v3_model_2_seed_000 took 190.0s (30 recycles)
2024-07-12 04:01:08,659 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=54.9 pTM=0.353 ipTM=0.143
2024-07-12 04:01:14,809 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=56.7 pTM=0.366 ipTM=0.158 tol=20.8
2024-07-12 04:01:20,952 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=57.9 pTM=0.396 ipTM=0.297 tol=6.38
2024-07-12 04:01:27,090 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=59.7 pTM=0.413 ipTM=0.348 tol=5.11
2024-07-12 04:01:33,240 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=61.6 pTM=0.456 ipTM=0.509 tol=1.99
2024-07-12 04:01:39,379 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=63 pTM=0.491 ipTM=0.666 tol=2.2
2024-07-12 04:01:45,517 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=63.5 pTM=0.508 ipTM=0.738 tol=1.52
2024-07-12 04:01:51,663 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=63.9 pTM=0.516 ipTM=0.771 tol=1.6
2024-07-12 04:01:57,810 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=63.9 pTM=0.517 ipTM=0.781 tol=0.865
2024-07-12 04:02:03,949 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=63.9 pTM=0.519 ipTM=0.789 tol=1.3
2024-07-12 04:02:10,096 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=63.8 pTM=0.516 ipTM=0.783 tol=1.75
2024-07-12 04:02:16,239 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=63.7 pTM=0.519 ipTM=0.794 tol=1.29
2024-07-12 04:02:22,380 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=63.8 pTM=0.52 ipTM=0.8 tol=1.41
2024-07-12 04:02:28,519 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=63.8 pTM=0.519 ipTM=0.795 tol=4.91
2024-07-12 04:02:34,664 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=64 pTM=0.52 ipTM=0.797 tol=1.8
2024-07-12 04:02:40,809 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=63.9 pTM=0.519 ipTM=0.8 tol=1.06
2024-07-12 04:02:46,956 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=63.7 pTM=0.517 ipTM=0.791 tol=4.68
2024-07-12 04:02:53,106 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=63.8 pTM=0.52 ipTM=0.796 tol=1.45
2024-07-12 04:02:59,249 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=63.5 pTM=0.515 ipTM=0.784 tol=3.91
2024-07-12 04:03:05,398 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=62.5 pTM=0.518 ipTM=0.797 tol=18.5
2024-07-12 04:03:11,543 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=63 pTM=0.517 ipTM=0.796 tol=13.2
2024-07-12 04:03:17,691 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=63.3 pTM=0.519 ipTM=0.802 tol=9.66
2024-07-12 04:03:23,850 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=63.8 pTM=0.521 ipTM=0.812 tol=5.08
2024-07-12 04:03:30,011 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=63.8 pTM=0.519 ipTM=0.805 tol=3.6
2024-07-12 04:03:36,177 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=63.4 pTM=0.518 ipTM=0.807 tol=3.2
2024-07-12 04:03:42,340 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=63.6 pTM=0.52 ipTM=0.821 tol=1.8
2024-07-12 04:03:48,490 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=63.4 pTM=0.518 ipTM=0.809 tol=1.49
2024-07-12 04:03:54,631 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=63.5 pTM=0.519 ipTM=0.809 tol=6.33
2024-07-12 04:04:00,777 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=63.3 pTM=0.517 ipTM=0.802 tol=6.4
2024-07-12 04:04:06,926 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=63.7 pTM=0.521 ipTM=0.807 tol=1.37
2024-07-12 04:04:13,072 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=63.7 pTM=0.519 ipTM=0.803 tol=2.14
2024-07-12 04:04:13,073 alphafold2_multimer_v3_model_3_seed_000 took 190.5s (30 recycles)
2024-07-12 04:04:19,380 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=57.5 pTM=0.354 ipTM=0.149
2024-07-12 04:04:25,505 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=58.2 pTM=0.375 ipTM=0.191 tol=11.2
2024-07-12 04:04:31,634 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=59.5 pTM=0.371 ipTM=0.168 tol=6.68
2024-07-12 04:04:37,764 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=59.2 pTM=0.376 ipTM=0.18 tol=4.99
2024-07-12 04:04:43,903 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=59.8 pTM=0.375 ipTM=0.173 tol=4.98
2024-07-12 04:04:50,037 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=59.6 pTM=0.382 ipTM=0.213 tol=5.4
2024-07-12 04:04:56,173 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=59.4 pTM=0.378 ipTM=0.19 tol=2.7
2024-07-12 04:05:02,307 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=59.5 pTM=0.383 ipTM=0.22 tol=2.71
2024-07-12 04:05:08,441 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=59.4 pTM=0.385 ipTM=0.214 tol=4.09
2024-07-12 04:05:14,571 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=59.5 pTM=0.385 ipTM=0.235 tol=3.73
2024-07-12 04:05:20,697 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=59.1 pTM=0.383 ipTM=0.211 tol=3.46
2024-07-12 04:05:26,824 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=59.3 pTM=0.385 ipTM=0.221 tol=2.03
2024-07-12 04:05:32,954 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=59.1 pTM=0.385 ipTM=0.214 tol=1.98
2024-07-12 04:05:39,077 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=59.3 pTM=0.389 ipTM=0.244 tol=2.65
2024-07-12 04:05:45,199 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=59.7 pTM=0.387 ipTM=0.22 tol=3.79
2024-07-12 04:05:51,323 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=59.3 pTM=0.388 ipTM=0.237 tol=3.9
2024-07-12 04:05:57,450 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=59.2 pTM=0.387 ipTM=0.232 tol=1.94
2024-07-12 04:06:03,573 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=59.8 pTM=0.384 ipTM=0.219 tol=4.62
2024-07-12 04:06:09,694 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=59.2 pTM=0.385 ipTM=0.221 tol=3.92
2024-07-12 04:06:15,821 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=59.7 pTM=0.386 ipTM=0.234 tol=2.75
2024-07-12 04:06:21,952 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=59.2 pTM=0.38 ipTM=0.209 tol=4.12
2024-07-12 04:06:28,077 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=59.7 pTM=0.383 ipTM=0.22 tol=1.55
2024-07-12 04:06:34,204 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=59.2 pTM=0.387 ipTM=0.235 tol=3.97
2024-07-12 04:06:40,326 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=59.1 pTM=0.376 ipTM=0.201 tol=2.07
2024-07-12 04:06:46,441 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=58.8 pTM=0.385 ipTM=0.215 tol=2.02
2024-07-12 04:06:52,561 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=59.3 pTM=0.383 ipTM=0.217 tol=2.56
2024-07-12 04:06:58,679 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=58.7 pTM=0.382 ipTM=0.209 tol=2.55
2024-07-12 04:07:04,800 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=59.4 pTM=0.383 ipTM=0.219 tol=4.25
2024-07-12 04:07:10,926 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=58.9 pTM=0.383 ipTM=0.214 tol=4.01
2024-07-12 04:07:17,042 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=59.1 pTM=0.387 ipTM=0.237 tol=2.12
2024-07-12 04:07:23,165 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=59.2 pTM=0.384 ipTM=0.218 tol=3.86
2024-07-12 04:07:23,166 alphafold2_multimer_v3_model_4_seed_000 took 189.9s (30 recycles)
2024-07-12 04:07:29,483 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=56.7 pTM=0.365 ipTM=0.155
2024-07-12 04:07:35,623 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=59.7 pTM=0.474 ipTM=0.597 tol=10.1
2024-07-12 04:07:41,760 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=60.4 pTM=0.481 ipTM=0.634 tol=5.46
2024-07-12 04:07:47,906 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=60.1 pTM=0.486 ipTM=0.654 tol=4.07
2024-07-12 04:07:54,055 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=60.8 pTM=0.501 ipTM=0.709 tol=3.68
2024-07-12 04:08:00,200 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=61.5 pTM=0.513 ipTM=0.752 tol=3.01
2024-07-12 04:08:06,341 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61.4 pTM=0.512 ipTM=0.751 tol=2.01
2024-07-12 04:08:12,493 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=61.8 pTM=0.52 ipTM=0.778 tol=3.11
2024-07-12 04:08:18,638 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61.8 pTM=0.521 ipTM=0.779 tol=3.2
2024-07-12 04:08:24,783 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=61.8 pTM=0.52 ipTM=0.768 tol=3.44
2024-07-12 04:08:30,922 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61.9 pTM=0.521 ipTM=0.773 tol=2.49
2024-07-12 04:08:37,053 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=61.9 pTM=0.522 ipTM=0.77 tol=2.76
2024-07-12 04:08:43,197 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=62.1 pTM=0.525 ipTM=0.773 tol=2.99
2024-07-12 04:08:49,337 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=62.4 pTM=0.53 ipTM=0.782 tol=3.45
2024-07-12 04:08:55,483 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=63.1 pTM=0.537 ipTM=0.792 tol=3.61
2024-07-12 04:09:01,616 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=63.1 pTM=0.541 ipTM=0.788 tol=2.06
2024-07-12 04:09:07,751 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=63.1 pTM=0.541 ipTM=0.784 tol=1.65
2024-07-12 04:09:13,891 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=63.3 pTM=0.545 ipTM=0.793 tol=1.14
2024-07-12 04:09:20,024 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=63.2 pTM=0.543 ipTM=0.783 tol=4.3
2024-07-12 04:09:26,163 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=63.5 pTM=0.547 ipTM=0.783 tol=3.9
2024-07-12 04:09:32,299 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=63.5 pTM=0.549 ipTM=0.785 tol=2.4
2024-07-12 04:09:38,440 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=63.4 pTM=0.549 ipTM=0.79 tol=1.25
2024-07-12 04:09:44,574 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=63.5 pTM=0.551 ipTM=0.792 tol=4.59
2024-07-12 04:09:50,707 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=63.4 pTM=0.548 ipTM=0.785 tol=3.11
2024-07-12 04:09:56,845 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=63.3 pTM=0.548 ipTM=0.789 tol=2.07
2024-07-12 04:10:02,973 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=63.5 pTM=0.549 ipTM=0.788 tol=1.23
2024-07-12 04:10:09,108 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=63.2 pTM=0.547 ipTM=0.785 tol=1.62
2024-07-12 04:10:15,242 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=63.4 pTM=0.553 ipTM=0.795 tol=2.05
2024-07-12 04:10:21,372 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=63.4 pTM=0.552 ipTM=0.793 tol=1.66
2024-07-12 04:10:27,501 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=63.3 pTM=0.551 ipTM=0.791 tol=1.57
2024-07-12 04:10:33,629 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=63.1 pTM=0.548 ipTM=0.781 tol=4.27
2024-07-12 04:10:33,629 alphafold2_multimer_v3_model_5_seed_000 took 190.3s (30 recycles)
2024-07-12 04:10:33,822 reranking models by 'multimer' metric
2024-07-12 04:10:58,122 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 04:11:28,619 Relaxation took 54.8s
2024-07-12 04:11:28,619 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=63.7 pTM=0.519 ipTM=0.803
2024-07-12 04:11:47,704 Relaxation took 19.1s
2024-07-12 04:11:47,704 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=63.1 pTM=0.548 ipTM=0.781
2024-07-12 04:12:16,656 Relaxation took 29.0s
2024-07-12 04:12:16,656 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=59.2 pTM=0.384 ipTM=0.218
2024-07-12 04:12:45,899 Relaxation took 29.2s
2024-07-12 04:12:45,899 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=57.2 pTM=0.373 ipTM=0.171
2024-07-12 04:13:14,786 Relaxation took 28.9s
2024-07-12 04:13:14,787 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=56.6 pTM=0.37 ipTM=0.154
2024-07-12 04:13:20,863 Done