2024-07-12 04:14:54,501 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 04:14:54,824 Running on GPU
2024-07-12 04:15:08,513 Found 6 citations for tools or databases
2024-07-12 04:15:08,513 Query 1/1: PAL4D_QSER1 (length 1899)
2024-07-12 04:15:08,965 Sleeping for 7s. Reason: PENDING
2024-07-12 04:15:16,392 Sleeping for 10s. Reason: RUNNING
2024-07-12 04:15:26,808 Sleeping for 6s. Reason: RUNNING
2024-07-12 04:15:33,227 Sleeping for 9s. Reason: RUNNING
2024-07-12 04:15:42,679 Sleeping for 10s. Reason: RUNNING
2024-07-12 04:15:53,100 Sleeping for 9s. Reason: RUNNING
2024-07-12 04:16:02,518 Sleeping for 7s. Reason: RUNNING
2024-07-12 04:16:09,951 Sleeping for 8s. Reason: RUNNING
2024-07-12 04:16:18,374 Sleeping for 5s. Reason: RUNNING
2024-07-12 04:16:23,782 Sleeping for 8s. Reason: RUNNING
2024-07-12 04:16:32,200 Sleeping for 8s. Reason: RUNNING
2024-07-12 04:16:40,622 Sleeping for 7s. Reason: RUNNING
2024-07-12 04:16:48,029 Sleeping for 5s. Reason: RUNNING
2024-07-12 04:16:53,460 Sleeping for 7s. Reason: RUNNING
2024-07-12 04:17:00,875 Sleeping for 7s. Reason: RUNNING
2024-07-12 04:17:10,082 Sleeping for 8s. Reason: PENDING
2024-07-12 04:17:18,510 Sleeping for 8s. Reason: RUNNING
2024-07-12 04:17:26,925 Sleeping for 6s. Reason: RUNNING
2024-07-12 04:17:33,339 Sleeping for 6s. Reason: RUNNING
2024-07-12 04:17:39,774 Sleeping for 8s. Reason: RUNNING
2024-07-12 04:17:48,197 Sleeping for 8s. Reason: RUNNING
2024-07-12 04:17:56,673 Sleeping for 10s. Reason: RUNNING
2024-07-12 04:18:10,139 Setting max_seq=508, max_extra_seq=2048
2024-07-12 04:24:09,918 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=30.8 pTM=0.27 ipTM=0.282
2024-07-12 04:26:28,282 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=31.7 pTM=0.268 ipTM=0.355 tol=30
2024-07-12 04:28:46,736 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=31.7 pTM=0.268 ipTM=0.32 tol=22
2024-07-12 04:31:05,193 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=31.9 pTM=0.27 ipTM=0.343 tol=22.2
2024-07-12 04:33:23,678 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=31.9 pTM=0.27 ipTM=0.345 tol=17.7
2024-07-12 04:35:42,159 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=31.8 pTM=0.271 ipTM=0.362 tol=18.8
2024-07-12 04:38:00,659 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=31.9 pTM=0.272 ipTM=0.384 tol=18.2
2024-07-12 04:40:19,164 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=31.8 pTM=0.271 ipTM=0.375 tol=20.9
2024-07-12 04:42:37,644 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=32 pTM=0.268 ipTM=0.331 tol=20.1
2024-07-12 04:44:56,176 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=32 pTM=0.268 ipTM=0.337 tol=19.8
2024-07-12 04:47:14,713 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=32.1 pTM=0.267 ipTM=0.321 tol=20.5
2024-07-12 04:49:33,272 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=32.1 pTM=0.269 ipTM=0.337 tol=21.1
2024-07-12 04:51:51,784 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=32.1 pTM=0.27 ipTM=0.335 tol=16.9
2024-07-12 04:54:10,347 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=31.9 pTM=0.272 ipTM=0.366 tol=16.5
2024-07-12 04:56:28,895 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=32 pTM=0.27 ipTM=0.362 tol=16.3
2024-07-12 04:58:47,423 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=32 pTM=0.271 ipTM=0.376 tol=16.9
2024-07-12 05:01:06,008 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=32 pTM=0.27 ipTM=0.368 tol=18
2024-07-12 05:03:24,561 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=31.8 pTM=0.269 ipTM=0.352 tol=15.9
2024-07-12 05:05:43,120 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=32 pTM=0.267 ipTM=0.33 tol=14.5
2024-07-12 05:08:01,653 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=31.8 pTM=0.27 ipTM=0.349 tol=16.7
2024-07-12 05:10:20,278 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=31.8 pTM=0.268 ipTM=0.332 tol=17.4
2024-07-12 05:12:38,873 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=31.9 pTM=0.268 ipTM=0.335 tol=17.2
2024-07-12 05:14:57,484 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=32.1 pTM=0.267 ipTM=0.332 tol=14.2
2024-07-12 05:17:16,049 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=32 pTM=0.269 ipTM=0.345 tol=16.6
2024-07-12 05:19:34,562 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=32 pTM=0.269 ipTM=0.349 tol=19.8
2024-07-12 05:21:53,107 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=32.1 pTM=0.271 ipTM=0.372 tol=15.3
2024-07-12 05:24:11,677 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=31.9 pTM=0.268 ipTM=0.339 tol=13.2
2024-07-12 05:26:30,255 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=32 pTM=0.269 ipTM=0.346 tol=14.9
2024-07-12 05:28:48,804 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=32 pTM=0.266 ipTM=0.332 tol=17.5
2024-07-12 05:31:07,322 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=31.9 pTM=0.268 ipTM=0.335 tol=14.7
2024-07-12 05:33:25,895 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=31.9 pTM=0.264 ipTM=0.333 tol=13.8
2024-07-12 05:33:25,897 alphafold2_multimer_v3_model_1_seed_000 took 4460.1s (30 recycles)
2024-07-12 05:35:46,374 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=32.2 pTM=0.28 ipTM=0.278
2024-07-12 05:38:05,106 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=32.9 pTM=0.282 ipTM=0.333 tol=24.1
2024-07-12 05:40:23,835 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=33 pTM=0.283 ipTM=0.358 tol=18.9
2024-07-12 05:42:42,594 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=33.1 pTM=0.282 ipTM=0.363 tol=17.8
2024-07-12 05:45:01,350 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=33.1 pTM=0.282 ipTM=0.357 tol=18.3
2024-07-12 05:47:20,114 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=33.1 pTM=0.283 ipTM=0.357 tol=13.9
2024-07-12 05:49:38,892 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=33.2 pTM=0.288 ipTM=0.421 tol=11.1
2024-07-12 05:51:57,675 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=33.9 pTM=0.312 ipTM=0.739 tol=10.8
2024-07-12 05:54:16,436 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=34.4 pTM=0.329 ipTM=0.898 tol=10.5
2024-07-12 05:56:35,188 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=34.6 pTM=0.329 ipTM=0.903 tol=9.89
2024-07-12 05:58:53,980 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=34.5 pTM=0.329 ipTM=0.905 tol=10.5
2024-07-12 06:01:12,714 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=34.4 pTM=0.329 ipTM=0.91 tol=12.5
2024-07-12 06:03:31,386 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=34.5 pTM=0.329 ipTM=0.917 tol=11.7
2024-07-12 06:05:50,068 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=34.6 pTM=0.328 ipTM=0.908 tol=12.4
2024-07-12 06:08:08,780 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=34.6 pTM=0.328 ipTM=0.917 tol=11.5
2024-07-12 06:10:27,507 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=34.5 pTM=0.328 ipTM=0.911 tol=10.4
2024-07-12 06:12:46,202 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=34.6 pTM=0.328 ipTM=0.912 tol=10.5
2024-07-12 06:15:04,945 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=34.8 pTM=0.328 ipTM=0.913 tol=11.2
2024-07-12 06:17:23,703 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=35 pTM=0.327 ipTM=0.908 tol=10.4
2024-07-12 06:19:42,482 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=34.9 pTM=0.327 ipTM=0.911 tol=11.1
2024-07-12 06:22:01,266 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=34.9 pTM=0.327 ipTM=0.908 tol=16.8
2024-07-12 06:24:20,051 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=34.8 pTM=0.326 ipTM=0.906 tol=14
2024-07-12 06:26:38,800 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=35 pTM=0.328 ipTM=0.917 tol=15.5
2024-07-12 06:28:57,597 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=34.9 pTM=0.327 ipTM=0.908 tol=11
2024-07-12 06:31:16,353 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=35.1 pTM=0.328 ipTM=0.919 tol=10.2
2024-07-12 06:33:35,104 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=35.2 pTM=0.329 ipTM=0.916 tol=9.7
2024-07-12 06:35:53,883 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=35 pTM=0.329 ipTM=0.913 tol=12.5
2024-07-12 06:38:12,685 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=35 pTM=0.328 ipTM=0.907 tol=10.4
2024-07-12 06:40:31,418 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=35 pTM=0.328 ipTM=0.908 tol=15.5
2024-07-12 06:42:50,173 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=35 pTM=0.329 ipTM=0.911 tol=11.4
2024-07-12 06:45:08,960 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=34.9 pTM=0.33 ipTM=0.91 tol=13.5
2024-07-12 06:45:08,962 alphafold2_multimer_v3_model_2_seed_000 took 4301.0s (30 recycles)
2024-07-12 06:47:30,247 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=30.1 pTM=0.259 ipTM=0.309
2024-07-12 06:49:49,645 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=31.4 pTM=0.259 ipTM=0.335 tol=34.5
2024-07-12 06:52:09,036 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=32.3 pTM=0.261 ipTM=0.51 tol=32
2024-07-12 06:54:28,641 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=32.8 pTM=0.26 ipTM=0.528 tol=22.4
2024-07-12 06:56:48,329 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=32.8 pTM=0.263 ipTM=0.601 tol=15.2
2024-07-12 06:59:08,066 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=32.7 pTM=0.264 ipTM=0.578 tol=16.8
2024-07-12 07:01:27,794 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=32.6 pTM=0.264 ipTM=0.548 tol=14.8
2024-07-12 07:03:47,562 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=32.7 pTM=0.263 ipTM=0.574 tol=12.7
2024-07-12 07:06:07,297 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=32.7 pTM=0.264 ipTM=0.569 tol=12.4
2024-07-12 07:08:27,129 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=32.7 pTM=0.263 ipTM=0.521 tol=12.1
2024-07-12 07:10:47,003 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=32.8 pTM=0.263 ipTM=0.539 tol=9.58
2024-07-12 07:13:06,820 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=32.8 pTM=0.263 ipTM=0.496 tol=10.7
2024-07-12 07:15:26,586 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=32.6 pTM=0.264 ipTM=0.561 tol=9.6
2024-07-12 07:17:46,406 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=32.6 pTM=0.263 ipTM=0.493 tol=9.09
2024-07-12 07:20:06,202 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=32.8 pTM=0.264 ipTM=0.608 tol=7.57
2024-07-12 07:22:25,971 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=32.6 pTM=0.264 ipTM=0.479 tol=8.9
2024-07-12 07:24:45,766 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=32.7 pTM=0.262 ipTM=0.617 tol=10.3
2024-07-12 07:27:05,574 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=32.5 pTM=0.263 ipTM=0.453 tol=6.92
2024-07-12 07:29:25,411 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=32.6 pTM=0.264 ipTM=0.491 tol=8.8
2024-07-12 07:31:45,274 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=32.7 pTM=0.263 ipTM=0.542 tol=9.34
2024-07-12 07:34:05,097 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=32.6 pTM=0.262 ipTM=0.478 tol=9.34
2024-07-12 07:36:24,845 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=32.7 pTM=0.262 ipTM=0.563 tol=7.77
2024-07-12 07:38:44,652 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=32.7 pTM=0.261 ipTM=0.552 tol=8.06
2024-07-12 07:41:04,400 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=32.7 pTM=0.262 ipTM=0.664 tol=7.35
2024-07-12 07:43:24,185 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=32.8 pTM=0.262 ipTM=0.558 tol=9.05
2024-07-12 07:45:44,065 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=32.8 pTM=0.262 ipTM=0.549 tol=14.4
2024-07-12 07:48:03,873 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=32.6 pTM=0.262 ipTM=0.557 tol=11.2
2024-07-12 07:50:23,672 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=32.6 pTM=0.263 ipTM=0.54 tol=11.7
2024-07-12 07:52:43,525 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=32.8 pTM=0.263 ipTM=0.56 tol=14.1
2024-07-12 07:55:03,273 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=32.6 pTM=0.263 ipTM=0.572 tol=12
2024-07-12 07:57:23,071 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=32.7 pTM=0.262 ipTM=0.63 tol=10.6
2024-07-12 07:57:23,073 alphafold2_multimer_v3_model_3_seed_000 took 4332.0s (30 recycles)
2024-07-12 07:59:44,085 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=29 pTM=0.257 ipTM=0.268
2024-07-12 08:02:03,699 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=30.2 pTM=0.263 ipTM=0.395 tol=28.5
2024-07-12 08:04:23,256 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=31 pTM=0.273 ipTM=0.415 tol=25.7
2024-07-12 08:06:42,933 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=31.1 pTM=0.271 ipTM=0.397 tol=22
2024-07-12 08:09:02,549 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=31.2 pTM=0.269 ipTM=0.369 tol=19
2024-07-12 08:11:22,220 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=31.2 pTM=0.269 ipTM=0.364 tol=16.2
2024-07-12 08:13:41,798 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=29 pTM=0.268 ipTM=0.365 tol=35.6
2024-07-12 08:16:01,748 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=31.1 pTM=0.262 ipTM=0.31 tol=33.1
2024-07-12 08:18:21,612 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=31.2 pTM=0.267 ipTM=0.336 tol=23.4
2024-07-12 08:20:41,438 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=31.3 pTM=0.268 ipTM=0.36 tol=25.9
2024-07-12 08:23:01,258 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=31.4 pTM=0.268 ipTM=0.351 tol=24.7
2024-07-12 08:25:21,087 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=31.3 pTM=0.268 ipTM=0.357 tol=21.2
2024-07-12 08:27:40,837 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=31.4 pTM=0.27 ipTM=0.375 tol=22.3
2024-07-12 08:30:00,635 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=31.2 pTM=0.271 ipTM=0.398 tol=16.5
2024-07-12 08:32:20,417 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=31.3 pTM=0.269 ipTM=0.367 tol=14.7
2024-07-12 08:34:40,123 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=31.4 pTM=0.268 ipTM=0.365 tol=16.4
2024-07-12 08:36:59,835 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=31.3 pTM=0.268 ipTM=0.365 tol=17.9
2024-07-12 08:39:19,556 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=31.2 pTM=0.267 ipTM=0.357 tol=17
2024-07-12 08:41:39,197 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=31.3 pTM=0.269 ipTM=0.348 tol=18.5
2024-07-12 08:43:58,963 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=31.3 pTM=0.271 ipTM=0.4 tol=17.1
2024-07-12 08:46:18,737 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=31.2 pTM=0.271 ipTM=0.392 tol=15.7
2024-07-12 08:48:38,323 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=31.2 pTM=0.27 ipTM=0.374 tol=21.6
2024-07-12 08:50:58,018 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=31.1 pTM=0.269 ipTM=0.363 tol=20.1
2024-07-12 08:53:17,668 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=31.4 pTM=0.273 ipTM=0.425 tol=17.4
2024-07-12 08:55:37,272 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=31.4 pTM=0.27 ipTM=0.376 tol=15.4
2024-07-12 08:57:57,040 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=31.3 pTM=0.271 ipTM=0.391 tol=12.6
2024-07-12 09:00:16,607 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=31.2 pTM=0.269 ipTM=0.372 tol=17
2024-07-12 09:02:36,346 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=31.4 pTM=0.269 ipTM=0.378 tol=21.8
2024-07-12 09:04:56,058 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=31.2 pTM=0.269 ipTM=0.371 tol=16.2
2024-07-12 09:07:15,733 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=31.4 pTM=0.269 ipTM=0.381 tol=20.7
2024-07-12 09:09:35,421 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=31.4 pTM=0.268 ipTM=0.359 tol=18.8
2024-07-12 09:09:35,423 alphafold2_multimer_v3_model_4_seed_000 took 4330.3s (30 recycles)
2024-07-12 09:11:57,083 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=31.2 pTM=0.258 ipTM=0.442
2024-07-12 09:14:16,935 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=32.8 pTM=0.269 ipTM=0.631 tol=25.9
2024-07-12 09:16:36,892 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=32.5 pTM=0.262 ipTM=0.33 tol=24.1
2024-07-12 09:18:56,991 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=32.7 pTM=0.26 ipTM=0.304 tol=25.6
2024-07-12 09:21:17,080 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=32.8 pTM=0.263 ipTM=0.296 tol=20.6
2024-07-12 09:23:37,248 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=32.9 pTM=0.261 ipTM=0.272 tol=16.9
2024-07-12 09:25:57,365 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=32.8 pTM=0.262 ipTM=0.277 tol=16.2
2024-07-12 09:28:17,547 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=33.2 pTM=0.262 ipTM=0.305 tol=17.6
2024-07-12 09:30:37,663 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=33.2 pTM=0.261 ipTM=0.268 tol=20.2
2024-07-12 09:32:57,864 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=33.2 pTM=0.26 ipTM=0.272 tol=16.5
2024-07-12 09:35:18,120 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=33.2 pTM=0.26 ipTM=0.347 tol=16.2
2024-07-12 09:37:38,222 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=33.1 pTM=0.26 ipTM=0.364 tol=14.9
2024-07-12 09:39:58,424 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=33 pTM=0.261 ipTM=0.363 tol=24
2024-07-12 09:42:18,649 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=33.1 pTM=0.259 ipTM=0.352 tol=21.4
2024-07-12 09:44:38,848 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=33 pTM=0.261 ipTM=0.347 tol=16.1
2024-07-12 09:46:58,959 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=33.1 pTM=0.26 ipTM=0.384 tol=15
2024-07-12 09:49:19,137 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=33.1 pTM=0.262 ipTM=0.346 tol=17.6
2024-07-12 09:51:39,318 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=33 pTM=0.26 ipTM=0.438 tol=28.7
2024-07-12 09:53:59,627 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=33.2 pTM=0.26 ipTM=0.513 tol=28.4
2024-07-12 09:56:19,895 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=33.4 pTM=0.26 ipTM=0.783 tol=15.1
2024-07-12 09:58:40,100 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=33.4 pTM=0.26 ipTM=0.815 tol=22.2
2024-07-12 10:01:00,234 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=33.4 pTM=0.26 ipTM=0.822 tol=23
2024-07-12 10:03:20,458 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=33.5 pTM=0.259 ipTM=0.832 tol=21.5
2024-07-12 10:05:40,568 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=33.3 pTM=0.26 ipTM=0.85 tol=18.5
2024-07-12 10:08:00,813 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=33.4 pTM=0.259 ipTM=0.841 tol=12.6
2024-07-12 10:10:21,054 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=33.7 pTM=0.26 ipTM=0.861 tol=22.5
2024-07-12 10:12:41,158 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=33.5 pTM=0.26 ipTM=0.869 tol=26.7
2024-07-12 10:15:01,384 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=33.2 pTM=0.26 ipTM=0.859 tol=25.3
2024-07-12 10:17:21,572 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=33.3 pTM=0.261 ipTM=0.872 tol=17.2
2024-07-12 10:19:41,719 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=33.3 pTM=0.26 ipTM=0.87 tol=17.4
2024-07-12 10:22:01,852 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=33.2 pTM=0.26 ipTM=0.879 tol=22.7
2024-07-12 10:22:01,854 alphafold2_multimer_v3_model_5_seed_000 took 4344.3s (30 recycles)
2024-07-12 10:22:03,963 reranking models by 'multimer' metric
2024-07-12 10:22:26,895 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 10:27:24,055 Relaxation took 320.1s
2024-07-12 10:27:24,055 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=34.9 pTM=0.33 ipTM=0.91
2024-07-12 10:32:56,707 Relaxation took 332.6s
2024-07-12 10:32:56,707 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=33.2 pTM=0.26 ipTM=0.879
2024-07-12 10:39:43,432 Relaxation took 406.7s
2024-07-12 10:39:43,432 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=32.7 pTM=0.262 ipTM=0.63
2024-07-12 10:45:27,143 Relaxation took 343.7s
2024-07-12 10:45:27,143 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=31.4 pTM=0.268 ipTM=0.359
2024-07-12 10:50:12,630 Relaxation took 285.5s
2024-07-12 10:50:12,630 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=31.9 pTM=0.264 ipTM=0.333
2024-07-12 10:50:26,089 Done