2024-07-12 05:06:22,657 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 05:06:27,816 Running on GPU
2024-07-12 05:06:44,266 Found 6 citations for tools or databases
2024-07-12 05:06:44,266 Query 1/1: PCDA7_AGRG6 (length 2158)
2024-07-12 05:06:44,716 Sleeping for 10s. Reason: PENDING
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2024-07-12 05:11:03,381 Sleeping for 9s. Reason: RUNNING
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2024-07-12 05:11:20,251 Sleeping for 7s. Reason: RUNNING
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2024-07-12 05:12:49,569 Sleeping for 10s. Reason: PENDING
2024-07-12 05:13:00,011 Sleeping for 6s. Reason: RUNNING
2024-07-12 05:13:06,425 Sleeping for 6s. Reason: RUNNING
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2024-07-12 05:13:42,134 Sleeping for 5s. Reason: RUNNING
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2024-07-12 05:14:01,475 Sleeping for 6s. Reason: RUNNING
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2024-07-12 05:15:27,145 Sleeping for 7s. Reason: RUNNING
2024-07-12 05:15:34,569 Sleeping for 9s. Reason: RUNNING
2024-07-12 05:15:44,023 Sleeping for 5s. Reason: RUNNING
2024-07-12 05:15:49,440 Sleeping for 10s. Reason: RUNNING
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2024-07-12 05:16:07,305 Sleeping for 10s. Reason: RUNNING
2024-07-12 05:16:17,739 Sleeping for 5s. Reason: RUNNING
2024-07-12 05:16:23,153 Sleeping for 10s. Reason: RUNNING
2024-07-12 05:16:33,578 Sleeping for 9s. Reason: RUNNING
2024-07-12 05:16:43,011 Sleeping for 8s. Reason: RUNNING
2024-07-12 05:16:51,426 Sleeping for 6s. Reason: RUNNING
2024-07-12 05:16:57,833 Sleeping for 6s. Reason: RUNNING
2024-07-12 05:17:21,980 Setting max_seq=508, max_extra_seq=2048
2024-07-12 05:24:41,079 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=63.4 pTM=0.342 ipTM=0.239
2024-07-12 05:27:07,451 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=62.1 pTM=0.335 ipTM=0.219 tol=12.4
2024-07-12 05:29:33,739 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=61.6 pTM=0.333 ipTM=0.221 tol=7.27
2024-07-12 05:31:59,959 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=61.5 pTM=0.334 ipTM=0.227 tol=3.83
2024-07-12 05:34:26,084 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=61.6 pTM=0.334 ipTM=0.221 tol=3.79
2024-07-12 05:36:52,234 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=61.4 pTM=0.334 ipTM=0.226 tol=3.36
2024-07-12 05:39:18,285 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=61.5 pTM=0.335 ipTM=0.225 tol=3.05
2024-07-12 05:41:44,320 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61.3 pTM=0.333 ipTM=0.226 tol=3.36
2024-07-12 05:44:10,258 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=61.5 pTM=0.335 ipTM=0.223 tol=3.04
2024-07-12 05:46:36,179 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=61.4 pTM=0.333 ipTM=0.223 tol=2.66
2024-07-12 05:49:02,036 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=61.4 pTM=0.331 ipTM=0.224 tol=3.23
2024-07-12 05:51:27,868 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=61.3 pTM=0.329 ipTM=0.222 tol=3.3
2024-07-12 05:53:53,745 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=61.3 pTM=0.332 ipTM=0.229 tol=3.03
2024-07-12 05:56:19,757 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=61.4 pTM=0.333 ipTM=0.228 tol=4.34
2024-07-12 05:58:45,930 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=61.2 pTM=0.328 ipTM=0.234 tol=4.62
2024-07-12 06:01:11,947 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=61.4 pTM=0.331 ipTM=0.228 tol=3.74
2024-07-12 06:03:37,876 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=61.1 pTM=0.331 ipTM=0.228 tol=4.76
2024-07-12 06:06:03,723 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=61.2 pTM=0.329 ipTM=0.223 tol=4.07
2024-07-12 06:08:29,423 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=61.4 pTM=0.331 ipTM=0.226 tol=3.38
2024-07-12 06:10:55,241 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=61.2 pTM=0.332 ipTM=0.222 tol=5.47
2024-07-12 06:13:21,140 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=61.4 pTM=0.33 ipTM=0.227 tol=3.33
2024-07-12 06:15:47,134 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=61.2 pTM=0.328 ipTM=0.222 tol=3.01
2024-07-12 06:18:13,018 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=61 pTM=0.329 ipTM=0.227 tol=2.45
2024-07-12 06:20:38,875 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=61.4 pTM=0.332 ipTM=0.224 tol=2.38
2024-07-12 06:23:04,671 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=61.3 pTM=0.332 ipTM=0.228 tol=3.55
2024-07-12 06:25:30,395 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=61.3 pTM=0.331 ipTM=0.224 tol=2.96
2024-07-12 06:27:56,133 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=61.4 pTM=0.333 ipTM=0.226 tol=3.59
2024-07-12 06:30:21,963 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=61.2 pTM=0.33 ipTM=0.22 tol=2.87
2024-07-12 06:32:47,725 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=61.1 pTM=0.333 ipTM=0.225 tol=3.21
2024-07-12 06:35:13,442 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=61.2 pTM=0.33 ipTM=0.223 tol=2.77
2024-07-12 06:37:39,136 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=61.1 pTM=0.331 ipTM=0.227 tol=1.86
2024-07-12 06:37:39,138 alphafold2_multimer_v3_model_1_seed_000 took 4752.6s (30 recycles)
2024-07-12 06:40:09,460 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=60.2 pTM=0.304 ipTM=0.242
2024-07-12 06:42:35,593 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=62.1 pTM=0.327 ipTM=0.224 tol=34.6
2024-07-12 06:45:01,763 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=62.1 pTM=0.33 ipTM=0.225 tol=13.7
2024-07-12 06:47:28,177 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=62.8 pTM=0.331 ipTM=0.219 tol=6.27
2024-07-12 06:49:54,661 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=62.8 pTM=0.329 ipTM=0.216 tol=7.4
2024-07-12 06:52:21,026 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=62.9 pTM=0.335 ipTM=0.217 tol=5.08
2024-07-12 06:54:47,312 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=63.1 pTM=0.335 ipTM=0.213 tol=3.74
2024-07-12 06:57:13,497 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=63.2 pTM=0.335 ipTM=0.212 tol=4.54
2024-07-12 06:59:39,569 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=63.5 pTM=0.341 ipTM=0.219 tol=4.14
2024-07-12 07:02:05,570 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=63.2 pTM=0.337 ipTM=0.219 tol=4.18
2024-07-12 07:04:31,532 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=63.3 pTM=0.335 ipTM=0.23 tol=6.15
2024-07-12 07:06:57,453 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=63.2 pTM=0.334 ipTM=0.237 tol=6.79
2024-07-12 07:09:23,456 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=63.2 pTM=0.339 ipTM=0.241 tol=6.77
2024-07-12 07:11:49,543 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=63.4 pTM=0.338 ipTM=0.245 tol=5.25
2024-07-12 07:14:15,684 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=63.3 pTM=0.336 ipTM=0.243 tol=4.54
2024-07-12 07:16:41,914 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=63.7 pTM=0.339 ipTM=0.24 tol=4.77
2024-07-12 07:19:08,237 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=63.6 pTM=0.34 ipTM=0.241 tol=2.93
2024-07-12 07:21:34,529 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=63.4 pTM=0.336 ipTM=0.24 tol=3.55
2024-07-12 07:24:00,923 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=63.3 pTM=0.336 ipTM=0.244 tol=3.98
2024-07-12 07:26:27,319 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=63.3 pTM=0.339 ipTM=0.241 tol=3.18
2024-07-12 07:28:53,513 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=63.4 pTM=0.338 ipTM=0.243 tol=4.09
2024-07-12 07:31:19,609 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=63.3 pTM=0.336 ipTM=0.244 tol=4.02
2024-07-12 07:33:45,579 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=63.3 pTM=0.338 ipTM=0.252 tol=4.82
2024-07-12 07:36:11,465 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=63.6 pTM=0.341 ipTM=0.253 tol=3.65
2024-07-12 07:38:37,365 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=63.4 pTM=0.34 ipTM=0.254 tol=3.06
2024-07-12 07:41:03,244 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=63.2 pTM=0.337 ipTM=0.249 tol=2.77
2024-07-12 07:43:29,201 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=63.1 pTM=0.34 ipTM=0.244 tol=3.56
2024-07-12 07:45:55,211 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.9 pTM=0.341 ipTM=0.238 tol=3.31
2024-07-12 07:48:21,300 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62.9 pTM=0.339 ipTM=0.232 tol=3.99
2024-07-12 07:50:47,340 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=63 pTM=0.34 ipTM=0.233 tol=3
2024-07-12 07:53:13,326 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=63.2 pTM=0.343 ipTM=0.236 tol=3.21
2024-07-12 07:53:13,329 alphafold2_multimer_v3_model_2_seed_000 took 4530.3s (30 recycles)
2024-07-12 07:55:43,622 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=62.5 pTM=0.327 ipTM=0.225
2024-07-12 07:58:10,164 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=61.4 pTM=0.336 ipTM=0.227 tol=19
2024-07-12 08:00:36,759 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=61.8 pTM=0.335 ipTM=0.216 tol=13.3
2024-07-12 08:03:03,266 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=61.6 pTM=0.338 ipTM=0.216 tol=5.7
2024-07-12 08:05:29,789 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=61.7 pTM=0.337 ipTM=0.215 tol=7.97
2024-07-12 08:07:56,279 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=61.1 pTM=0.337 ipTM=0.213 tol=3.9
2024-07-12 08:10:22,866 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=60.7 pTM=0.338 ipTM=0.215 tol=3.7
2024-07-12 08:12:49,448 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=61.2 pTM=0.337 ipTM=0.212 tol=2.88
2024-07-12 08:15:16,027 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61.2 pTM=0.338 ipTM=0.214 tol=3.25
2024-07-12 08:17:42,532 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=60.9 pTM=0.339 ipTM=0.224 tol=3.27
2024-07-12 08:20:09,104 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=60.8 pTM=0.338 ipTM=0.214 tol=6.55
2024-07-12 08:22:35,711 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=60.8 pTM=0.336 ipTM=0.224 tol=6.65
2024-07-12 08:25:02,420 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=61.3 pTM=0.336 ipTM=0.216 tol=5.27
2024-07-12 08:27:29,012 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=61.2 pTM=0.336 ipTM=0.224 tol=3.34
2024-07-12 08:29:55,621 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=61.4 pTM=0.336 ipTM=0.216 tol=5.6
2024-07-12 08:32:22,156 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=61.3 pTM=0.337 ipTM=0.221 tol=6.8
2024-07-12 08:34:48,692 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=61.5 pTM=0.336 ipTM=0.212 tol=4.3
2024-07-12 08:37:15,093 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.3 pTM=0.335 ipTM=0.216 tol=2.78
2024-07-12 08:39:41,478 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.5 pTM=0.336 ipTM=0.213 tol=2.73
2024-07-12 08:42:07,834 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.1 pTM=0.335 ipTM=0.216 tol=4.57
2024-07-12 08:44:34,273 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=61.1 pTM=0.335 ipTM=0.212 tol=4.17
2024-07-12 08:47:00,767 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=61.2 pTM=0.334 ipTM=0.216 tol=2.94
2024-07-12 08:49:27,379 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61 pTM=0.334 ipTM=0.209 tol=3.04
2024-07-12 08:51:54,050 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=61.3 pTM=0.335 ipTM=0.215 tol=6.56
2024-07-12 08:54:20,719 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.1 pTM=0.336 ipTM=0.209 tol=3.64
2024-07-12 08:56:47,378 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61 pTM=0.334 ipTM=0.212 tol=5.13
2024-07-12 08:59:13,994 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=60.6 pTM=0.336 ipTM=0.212 tol=8.87
2024-07-12 09:01:40,697 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=60.9 pTM=0.334 ipTM=0.215 tol=7.89
2024-07-12 09:04:07,366 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=61.2 pTM=0.333 ipTM=0.21 tol=5.27
2024-07-12 09:06:33,999 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=61.2 pTM=0.335 ipTM=0.212 tol=6.15
2024-07-12 09:09:00,571 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=61.3 pTM=0.335 ipTM=0.208 tol=2.24
2024-07-12 09:09:00,574 alphafold2_multimer_v3_model_3_seed_000 took 4543.4s (30 recycles)
2024-07-12 09:11:31,527 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=61.2 pTM=0.298 ipTM=0.229
2024-07-12 09:13:58,796 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=61 pTM=0.295 ipTM=0.224 tol=21
2024-07-12 09:16:26,062 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=61.5 pTM=0.296 ipTM=0.217 tol=11.7
2024-07-12 09:18:53,145 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=60.2 pTM=0.3 ipTM=0.22 tol=12.4
2024-07-12 09:21:20,212 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=61.2 pTM=0.295 ipTM=0.216 tol=9.36
2024-07-12 09:23:47,022 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=61.8 pTM=0.3 ipTM=0.211 tol=7.66
2024-07-12 09:26:13,682 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=61.5 pTM=0.303 ipTM=0.211 tol=8.16
2024-07-12 09:28:40,361 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=61.6 pTM=0.302 ipTM=0.209 tol=6.95
2024-07-12 09:31:07,017 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=62 pTM=0.302 ipTM=0.213 tol=3.96
2024-07-12 09:33:33,810 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=62.6 pTM=0.299 ipTM=0.211 tol=8.19
2024-07-12 09:36:00,537 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=62.5 pTM=0.3 ipTM=0.211 tol=5.14
2024-07-12 09:38:27,306 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=62.6 pTM=0.299 ipTM=0.209 tol=5.28
2024-07-12 09:40:54,090 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=62.3 pTM=0.299 ipTM=0.211 tol=5.16
2024-07-12 09:43:20,898 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=62.4 pTM=0.3 ipTM=0.212 tol=5.57
2024-07-12 09:45:47,837 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=62.5 pTM=0.299 ipTM=0.211 tol=3.63
2024-07-12 09:48:14,801 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=62.8 pTM=0.299 ipTM=0.214 tol=2.87
2024-07-12 09:50:41,700 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=62.5 pTM=0.3 ipTM=0.212 tol=6.16
2024-07-12 09:53:08,623 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=62.7 pTM=0.298 ipTM=0.21 tol=5.83
2024-07-12 09:55:35,533 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=62.6 pTM=0.3 ipTM=0.212 tol=6.14
2024-07-12 09:58:02,428 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=62.5 pTM=0.298 ipTM=0.211 tol=5.54
2024-07-12 10:00:29,246 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=62.4 pTM=0.297 ipTM=0.211 tol=3.84
2024-07-12 10:02:56,023 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=62.5 pTM=0.298 ipTM=0.21 tol=5.19
2024-07-12 10:05:22,615 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=62.3 pTM=0.299 ipTM=0.214 tol=5.08
2024-07-12 10:07:49,137 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=62.4 pTM=0.299 ipTM=0.218 tol=3.97
2024-07-12 10:10:15,570 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=62.6 pTM=0.299 ipTM=0.219 tol=4.95
2024-07-12 10:12:41,983 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=62.7 pTM=0.299 ipTM=0.215 tol=4.62
2024-07-12 10:15:08,440 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=62.4 pTM=0.299 ipTM=0.215 tol=5.26
2024-07-12 10:17:35,001 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=62.2 pTM=0.297 ipTM=0.219 tol=4.86
2024-07-12 10:20:01,455 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=62.3 pTM=0.301 ipTM=0.225 tol=2.97
2024-07-12 10:22:27,974 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=62.1 pTM=0.299 ipTM=0.232 tol=6.3
2024-07-12 10:24:54,481 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=62.7 pTM=0.301 ipTM=0.232 tol=6.21
2024-07-12 10:24:54,484 alphafold2_multimer_v3_model_4_seed_000 took 4550.0s (30 recycles)
2024-07-12 10:27:24,799 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=56 pTM=0.296 ipTM=0.224
2024-07-12 10:29:50,954 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=58.6 pTM=0.312 ipTM=0.218 tol=14.3
2024-07-12 10:32:17,023 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=59.7 pTM=0.328 ipTM=0.214 tol=10.9
2024-07-12 10:34:43,110 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=59.4 pTM=0.333 ipTM=0.21 tol=11
2024-07-12 10:37:09,069 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=60.5 pTM=0.336 ipTM=0.211 tol=7.42
2024-07-12 10:39:35,114 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=60.4 pTM=0.337 ipTM=0.21 tol=5.62
2024-07-12 10:42:01,127 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=60.4 pTM=0.337 ipTM=0.208 tol=4.53
2024-07-12 10:44:26,984 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=60.7 pTM=0.337 ipTM=0.212 tol=5.36
2024-07-12 10:46:52,785 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=60.8 pTM=0.337 ipTM=0.208 tol=4.78
2024-07-12 10:49:18,583 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=60.8 pTM=0.338 ipTM=0.21 tol=6
2024-07-12 10:51:44,508 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=60.7 pTM=0.338 ipTM=0.207 tol=5.38
2024-07-12 10:54:10,485 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=60.4 pTM=0.334 ipTM=0.209 tol=4.75
2024-07-12 10:56:36,514 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=60.8 pTM=0.335 ipTM=0.206 tol=3.88
2024-07-12 10:59:02,618 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=60.7 pTM=0.337 ipTM=0.21 tol=3.23
2024-07-12 11:01:28,869 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=60.5 pTM=0.335 ipTM=0.207 tol=2.86
2024-07-12 11:03:55,092 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=60.9 pTM=0.338 ipTM=0.21 tol=6.77
2024-07-12 11:06:21,214 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=60.6 pTM=0.337 ipTM=0.206 tol=7.24
2024-07-12 11:08:47,231 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=60.8 pTM=0.337 ipTM=0.209 tol=5.25
2024-07-12 11:11:13,189 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=60.7 pTM=0.339 ipTM=0.21 tol=3.66
2024-07-12 11:13:39,081 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=60.6 pTM=0.338 ipTM=0.213 tol=3.66
2024-07-12 11:16:05,037 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=60.5 pTM=0.337 ipTM=0.208 tol=5.25
2024-07-12 11:18:31,086 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=60.5 pTM=0.336 ipTM=0.209 tol=5.27
2024-07-12 11:20:57,175 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=60.4 pTM=0.337 ipTM=0.207 tol=4.88
2024-07-12 11:23:23,366 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=60.5 pTM=0.336 ipTM=0.208 tol=5.45
2024-07-12 11:25:49,431 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=60.6 pTM=0.338 ipTM=0.21 tol=4.64
2024-07-12 11:28:15,416 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=60.5 pTM=0.337 ipTM=0.211 tol=3.76
2024-07-12 11:30:41,321 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=60.5 pTM=0.338 ipTM=0.209 tol=3.38
2024-07-12 11:33:07,210 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=60.2 pTM=0.334 ipTM=0.21 tol=3.03
2024-07-12 11:35:33,197 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=60.2 pTM=0.336 ipTM=0.207 tol=4.05
2024-07-12 11:37:59,252 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=60.4 pTM=0.337 ipTM=0.207 tol=4.67
2024-07-12 11:40:25,410 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=60.4 pTM=0.338 ipTM=0.207 tol=3.7
2024-07-12 11:40:25,412 alphafold2_multimer_v3_model_5_seed_000 took 4527.1s (30 recycles)
2024-07-12 11:40:32,049 reranking models by 'multimer' metric
2024-07-12 11:40:51,581 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 11:51:14,005 Relaxation took 642.0s
2024-07-12 11:51:14,005 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=63.2 pTM=0.343 ipTM=0.236
2024-07-12 11:58:48,577 Relaxation took 454.6s
2024-07-12 11:58:48,578 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=61.1 pTM=0.331 ipTM=0.227
2024-07-12 12:13:41,239 Relaxation took 892.7s
2024-07-12 12:13:41,239 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=62.7 pTM=0.301 ipTM=0.232
2024-07-12 12:19:23,405 Relaxation took 342.2s
2024-07-12 12:19:23,405 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=61.3 pTM=0.335 ipTM=0.208
2024-07-12 12:27:38,435 Relaxation took 495.0s
2024-07-12 12:27:38,435 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=60.4 pTM=0.338 ipTM=0.207
2024-07-12 12:27:45,718 Done