2024-07-12 05:22:50,165 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 05:22:50,506 Running on GPU
2024-07-12 05:23:06,300 Found 6 citations for tools or databases
2024-07-12 05:23:06,300 Query 1/1: PCDGI_CAH5B (length 1247)
2024-07-12 05:23:06,772 Sleeping for 9s. Reason: PENDING
2024-07-12 05:23:16,196 Sleeping for 5s. Reason: RUNNING
2024-07-12 05:23:21,619 Sleeping for 5s. Reason: RUNNING
2024-07-12 05:23:27,046 Sleeping for 9s. Reason: RUNNING
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2024-07-12 05:23:51,345 Sleeping for 5s. Reason: RUNNING
2024-07-12 05:23:56,760 Sleeping for 10s. Reason: RUNNING
2024-07-12 05:24:07,186 Sleeping for 7s. Reason: RUNNING
2024-07-12 05:24:14,612 Sleeping for 7s. Reason: RUNNING
2024-07-12 05:24:22,029 Sleeping for 7s. Reason: RUNNING
2024-07-12 05:24:29,466 Sleeping for 8s. Reason: RUNNING
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2024-07-12 05:24:51,742 Sleeping for 6s. Reason: RUNNING
2024-07-12 05:24:58,176 Sleeping for 9s. Reason: RUNNING
2024-07-12 05:25:07,596 Sleeping for 9s. Reason: RUNNING
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2024-07-12 05:25:30,878 Sleeping for 10s. Reason: RUNNING
2024-07-12 05:25:41,310 Sleeping for 6s. Reason: RUNNING
2024-07-12 05:25:47,737 Sleeping for 5s. Reason: RUNNING
2024-07-12 05:25:53,151 Sleeping for 10s. Reason: RUNNING
2024-07-12 05:26:03,565 Sleeping for 9s. Reason: RUNNING
2024-07-12 05:26:13,001 Sleeping for 10s. Reason: RUNNING
2024-07-12 05:26:23,409 Sleeping for 7s. Reason: RUNNING
2024-07-12 05:26:30,835 Sleeping for 9s. Reason: RUNNING
2024-07-12 05:26:40,257 Sleeping for 6s. Reason: RUNNING
2024-07-12 05:26:46,669 Sleeping for 5s. Reason: RUNNING
2024-07-12 05:26:52,088 Sleeping for 8s. Reason: RUNNING
2024-07-12 05:27:00,509 Sleeping for 9s. Reason: RUNNING
2024-07-12 05:27:09,926 Sleeping for 5s. Reason: RUNNING
2024-07-12 05:27:15,347 Sleeping for 5s. Reason: RUNNING
2024-07-12 05:27:23,847 Sleeping for 5s. Reason: PENDING
2024-07-12 05:27:29,273 Sleeping for 7s. Reason: RUNNING
2024-07-12 05:27:36,682 Sleeping for 6s. Reason: RUNNING
2024-07-12 05:27:43,107 Sleeping for 8s. Reason: RUNNING
2024-07-12 05:27:51,532 Sleeping for 5s. Reason: RUNNING
2024-07-12 05:27:56,963 Sleeping for 8s. Reason: RUNNING
2024-07-12 05:28:05,423 Sleeping for 8s. Reason: RUNNING
2024-07-12 05:28:13,847 Sleeping for 7s. Reason: RUNNING
2024-07-12 05:28:21,261 Sleeping for 10s. Reason: RUNNING
2024-07-12 05:28:31,676 Sleeping for 10s. Reason: RUNNING
2024-07-12 05:28:42,098 Sleeping for 6s. Reason: RUNNING
2024-07-12 05:28:48,535 Sleeping for 9s. Reason: RUNNING
2024-07-12 05:28:57,977 Sleeping for 5s. Reason: RUNNING
2024-07-12 05:29:03,395 Sleeping for 7s. Reason: RUNNING
2024-07-12 05:29:10,814 Sleeping for 10s. Reason: RUNNING
2024-07-12 05:29:21,231 Sleeping for 5s. Reason: RUNNING
2024-07-12 05:29:26,660 Sleeping for 9s. Reason: RUNNING
2024-07-12 05:29:36,106 Sleeping for 10s. Reason: RUNNING
2024-07-12 05:29:52,298 Setting max_seq=508, max_extra_seq=2048
2024-07-12 05:33:28,081 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=66.8 pTM=0.388 ipTM=0.174
2024-07-12 05:34:06,843 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=67.9 pTM=0.415 ipTM=0.206 tol=12.4
2024-07-12 05:34:45,802 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=68.1 pTM=0.425 ipTM=0.229 tol=6.85
2024-07-12 05:35:24,851 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=68.2 pTM=0.423 ipTM=0.211 tol=6.01
2024-07-12 05:36:03,964 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=68.2 pTM=0.419 ipTM=0.218 tol=3.99
2024-07-12 05:36:43,121 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=68.4 pTM=0.423 ipTM=0.226 tol=3.64
2024-07-12 05:37:22,322 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=68.3 pTM=0.416 ipTM=0.205 tol=3.2
2024-07-12 05:38:01,524 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=68.4 pTM=0.413 ipTM=0.22 tol=3.18
2024-07-12 05:38:40,845 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=68.5 pTM=0.419 ipTM=0.211 tol=7.35
2024-07-12 05:39:20,044 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=68.5 pTM=0.42 ipTM=0.228 tol=7.01
2024-07-12 05:39:59,237 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=68.4 pTM=0.419 ipTM=0.218 tol=3.65
2024-07-12 05:40:38,424 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=68.2 pTM=0.419 ipTM=0.227 tol=2.92
2024-07-12 05:41:17,655 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=68.4 pTM=0.422 ipTM=0.211 tol=3.67
2024-07-12 05:41:56,861 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=68.2 pTM=0.414 ipTM=0.206 tol=3.72
2024-07-12 05:42:36,062 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=68.3 pTM=0.419 ipTM=0.217 tol=2.65
2024-07-12 05:43:15,272 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=68.4 pTM=0.417 ipTM=0.212 tol=7.65
2024-07-12 05:43:54,483 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=68.5 pTM=0.414 ipTM=0.209 tol=7.73
2024-07-12 05:44:33,703 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=68.2 pTM=0.411 ipTM=0.214 tol=2.93
2024-07-12 05:45:12,930 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=68.3 pTM=0.417 ipTM=0.206 tol=3.71
2024-07-12 05:45:52,141 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=68.1 pTM=0.413 ipTM=0.211 tol=3.31
2024-07-12 05:46:31,309 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=68.2 pTM=0.415 ipTM=0.215 tol=3.05
2024-07-12 05:47:10,506 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=68.3 pTM=0.417 ipTM=0.212 tol=2.78
2024-07-12 05:47:49,700 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=68.4 pTM=0.416 ipTM=0.217 tol=6.23
2024-07-12 05:48:28,898 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=68.3 pTM=0.416 ipTM=0.215 tol=6.01
2024-07-12 05:49:08,123 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=68.2 pTM=0.416 ipTM=0.217 tol=3.51
2024-07-12 05:49:47,352 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=68.2 pTM=0.413 ipTM=0.213 tol=3.25
2024-07-12 05:50:26,581 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=68.3 pTM=0.414 ipTM=0.214 tol=2.3
2024-07-12 05:51:05,786 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=68.2 pTM=0.415 ipTM=0.213 tol=1.87
2024-07-12 05:51:45,021 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=68.1 pTM=0.415 ipTM=0.215 tol=2.23
2024-07-12 05:52:24,245 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=68.2 pTM=0.415 ipTM=0.217 tol=2.91
2024-07-12 05:53:03,497 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=68.3 pTM=0.412 ipTM=0.217 tol=2.2
2024-07-12 05:53:03,498 alphafold2_multimer_v3_model_1_seed_000 took 1371.9s (30 recycles)
2024-07-12 05:53:43,604 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=68.4 pTM=0.408 ipTM=0.262
2024-07-12 05:54:22,776 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=68.9 pTM=0.413 ipTM=0.242 tol=14.5
2024-07-12 05:55:01,965 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=69.4 pTM=0.406 ipTM=0.235 tol=6.39
2024-07-12 05:55:41,140 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=69.8 pTM=0.407 ipTM=0.237 tol=4.3
2024-07-12 05:56:20,378 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=69.8 pTM=0.403 ipTM=0.236 tol=2.65
2024-07-12 05:56:59,610 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=69.8 pTM=0.407 ipTM=0.237 tol=2.05
2024-07-12 05:57:38,861 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=69.9 pTM=0.404 ipTM=0.24 tol=1.82
2024-07-12 05:58:18,113 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=69.8 pTM=0.406 ipTM=0.243 tol=2.83
2024-07-12 05:58:57,368 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=69.9 pTM=0.403 ipTM=0.239 tol=2.58
2024-07-12 05:59:36,610 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=69.9 pTM=0.407 ipTM=0.25 tol=3.23
2024-07-12 06:00:15,851 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=69.9 pTM=0.406 ipTM=0.265 tol=1.77
2024-07-12 06:00:55,055 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=69.8 pTM=0.404 ipTM=0.268 tol=1.88
2024-07-12 06:01:34,248 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=70 pTM=0.411 ipTM=0.273 tol=2.41
2024-07-12 06:02:13,437 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=69.9 pTM=0.405 ipTM=0.277 tol=1.37
2024-07-12 06:02:52,642 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=70 pTM=0.403 ipTM=0.281 tol=2.26
2024-07-12 06:03:31,855 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=70 pTM=0.41 ipTM=0.269 tol=2.5
2024-07-12 06:04:11,038 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=69.9 pTM=0.405 ipTM=0.268 tol=2.12
2024-07-12 06:04:50,223 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=69.8 pTM=0.406 ipTM=0.269 tol=2.45
2024-07-12 06:05:29,411 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=69.9 pTM=0.409 ipTM=0.265 tol=1.82
2024-07-12 06:06:08,688 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=69.9 pTM=0.403 ipTM=0.263 tol=1.77
2024-07-12 06:06:47,878 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=69.7 pTM=0.406 ipTM=0.269 tol=2.95
2024-07-12 06:07:27,091 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=69.9 pTM=0.408 ipTM=0.266 tol=2.45
2024-07-12 06:08:06,278 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=69.7 pTM=0.408 ipTM=0.266 tol=2.47
2024-07-12 06:08:45,468 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=69.8 pTM=0.408 ipTM=0.269 tol=1.93
2024-07-12 06:09:24,650 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=69.6 pTM=0.406 ipTM=0.263 tol=1.89
2024-07-12 06:10:03,883 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=69.9 pTM=0.409 ipTM=0.269 tol=1.97
2024-07-12 06:10:43,082 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=69.9 pTM=0.408 ipTM=0.271 tol=2.38
2024-07-12 06:11:22,260 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=69.8 pTM=0.407 ipTM=0.268 tol=2.83
2024-07-12 06:12:01,407 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=69.8 pTM=0.405 ipTM=0.268 tol=1.92
2024-07-12 06:12:40,563 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=69.8 pTM=0.407 ipTM=0.262 tol=2.14
2024-07-12 06:13:19,726 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=69.8 pTM=0.403 ipTM=0.262 tol=1.78
2024-07-12 06:13:19,727 alphafold2_multimer_v3_model_2_seed_000 took 1215.3s (30 recycles)
2024-07-12 06:13:59,881 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=65.1 pTM=0.421 ipTM=0.271
2024-07-12 06:14:39,121 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=65.8 pTM=0.44 ipTM=0.266 tol=15.4
2024-07-12 06:15:18,344 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=65.8 pTM=0.442 ipTM=0.276 tol=7.66
2024-07-12 06:15:57,616 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=65.9 pTM=0.445 ipTM=0.263 tol=11.4
2024-07-12 06:16:36,872 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66.2 pTM=0.445 ipTM=0.269 tol=8.31
2024-07-12 06:17:16,243 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=65.9 pTM=0.448 ipTM=0.268 tol=8.62
2024-07-12 06:17:55,495 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=66.1 pTM=0.451 ipTM=0.27 tol=4.71
2024-07-12 06:18:34,790 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=66.1 pTM=0.447 ipTM=0.263 tol=5.05
2024-07-12 06:19:14,070 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=66 pTM=0.449 ipTM=0.272 tol=5.16
2024-07-12 06:19:53,365 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=66.1 pTM=0.453 ipTM=0.274 tol=6.87
2024-07-12 06:20:32,634 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=66 pTM=0.455 ipTM=0.279 tol=10.2
2024-07-12 06:21:11,905 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=65.8 pTM=0.452 ipTM=0.276 tol=8.95
2024-07-12 06:21:51,201 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=65.9 pTM=0.449 ipTM=0.271 tol=6.85
2024-07-12 06:22:30,485 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=65.9 pTM=0.45 ipTM=0.274 tol=4.73
2024-07-12 06:23:09,786 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=65.8 pTM=0.448 ipTM=0.269 tol=10.8
2024-07-12 06:23:49,053 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=65.9 pTM=0.453 ipTM=0.282 tol=12.4
2024-07-12 06:24:28,328 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=66 pTM=0.456 ipTM=0.284 tol=9.46
2024-07-12 06:25:07,569 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=65.9 pTM=0.456 ipTM=0.3 tol=8.3
2024-07-12 06:25:46,787 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=66.9 pTM=0.494 ipTM=0.487 tol=10.1
2024-07-12 06:26:26,014 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=66.7 pTM=0.487 ipTM=0.436 tol=8.04
2024-07-12 06:27:05,237 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=66.9 pTM=0.494 ipTM=0.468 tol=6.7
2024-07-12 06:27:44,435 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=66.7 pTM=0.492 ipTM=0.45 tol=6.97
2024-07-12 06:28:23,642 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=66.7 pTM=0.487 ipTM=0.432 tol=4.98
2024-07-12 06:29:02,885 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=66.1 pTM=0.462 ipTM=0.309 tol=8.24
2024-07-12 06:29:42,110 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=66.4 pTM=0.474 ipTM=0.354 tol=5.67
2024-07-12 06:30:21,335 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=66.7 pTM=0.491 ipTM=0.465 tol=7.2
2024-07-12 06:31:00,572 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=66.5 pTM=0.478 ipTM=0.388 tol=4.07
2024-07-12 06:31:39,820 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=66.4 pTM=0.474 ipTM=0.363 tol=8.7
2024-07-12 06:32:19,020 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=66.8 pTM=0.5 ipTM=0.475 tol=4.64
2024-07-12 06:32:58,242 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=66.6 pTM=0.485 ipTM=0.423 tol=4.48
2024-07-12 06:33:37,465 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=66.8 pTM=0.49 ipTM=0.439 tol=5.29
2024-07-12 06:33:37,466 alphafold2_multimer_v3_model_3_seed_000 took 1216.8s (30 recycles)
2024-07-12 06:34:21,060 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=67 pTM=0.385 ipTM=0.212
2024-07-12 06:35:00,350 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=67.2 pTM=0.397 ipTM=0.24 tol=17.4
2024-07-12 06:35:39,736 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=67.7 pTM=0.384 ipTM=0.183 tol=16.8
2024-07-12 06:36:19,159 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=67.8 pTM=0.387 ipTM=0.187 tol=7.09
2024-07-12 06:36:58,576 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=68 pTM=0.385 ipTM=0.176 tol=8.88
2024-07-12 06:37:37,953 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=67.9 pTM=0.388 ipTM=0.186 tol=16.5
2024-07-12 06:38:17,315 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=68 pTM=0.387 ipTM=0.19 tol=6.82
2024-07-12 06:38:56,689 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=67.6 pTM=0.389 ipTM=0.203 tol=11
2024-07-12 06:39:36,053 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=67.8 pTM=0.386 ipTM=0.196 tol=7.55
2024-07-12 06:40:15,402 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=67.9 pTM=0.387 ipTM=0.193 tol=5.98
2024-07-12 06:40:54,762 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=67.6 pTM=0.386 ipTM=0.197 tol=12.3
2024-07-12 06:41:34,122 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=67.9 pTM=0.385 ipTM=0.193 tol=13.9
2024-07-12 06:42:13,475 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=67.9 pTM=0.392 ipTM=0.202 tol=9.34
2024-07-12 06:42:52,848 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=68.1 pTM=0.388 ipTM=0.19 tol=6.7
2024-07-12 06:43:32,238 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=68.1 pTM=0.388 ipTM=0.197 tol=4.07
2024-07-12 06:44:11,626 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=68 pTM=0.389 ipTM=0.194 tol=7.64
2024-07-12 06:44:50,968 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=67.9 pTM=0.388 ipTM=0.208 tol=6.32
2024-07-12 06:45:30,322 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=68.1 pTM=0.39 ipTM=0.206 tol=7.4
2024-07-12 06:46:09,654 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=68.2 pTM=0.395 ipTM=0.227 tol=6.53
2024-07-12 06:46:49,003 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=68.1 pTM=0.386 ipTM=0.226 tol=5.26
2024-07-12 06:47:28,331 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=67.9 pTM=0.39 ipTM=0.225 tol=7.86
2024-07-12 06:48:07,648 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=68.1 pTM=0.389 ipTM=0.218 tol=8.48
2024-07-12 06:48:46,997 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=67.8 pTM=0.388 ipTM=0.219 tol=8.08
2024-07-12 06:49:26,277 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=67.9 pTM=0.386 ipTM=0.216 tol=7.48
2024-07-12 06:50:05,547 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=68.1 pTM=0.388 ipTM=0.202 tol=8.28
2024-07-12 06:50:44,826 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=63.2 pTM=0.387 ipTM=0.196 tol=49.7
2024-07-12 06:51:24,141 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=67.5 pTM=0.382 ipTM=0.19 tol=49.9
2024-07-12 06:52:03,428 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=67.6 pTM=0.388 ipTM=0.19 tol=9.7
2024-07-12 06:52:42,688 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=67.8 pTM=0.385 ipTM=0.191 tol=9.73
2024-07-12 06:53:21,957 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=67.8 pTM=0.385 ipTM=0.204 tol=9.76
2024-07-12 06:54:01,283 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=68 pTM=0.385 ipTM=0.19 tol=5.62
2024-07-12 06:54:01,284 alphafold2_multimer_v3_model_4_seed_000 took 1219.4s (30 recycles)
2024-07-12 06:54:41,469 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=65.4 pTM=0.372 ipTM=0.195
2024-07-12 06:55:20,736 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.2 pTM=0.383 ipTM=0.215 tol=15.1
2024-07-12 06:56:00,046 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=67.2 pTM=0.374 ipTM=0.176 tol=7.99
2024-07-12 06:56:39,307 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=67.3 pTM=0.385 ipTM=0.206 tol=9.23
2024-07-12 06:57:18,555 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67.4 pTM=0.389 ipTM=0.218 tol=7.25
2024-07-12 06:57:57,835 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=67.5 pTM=0.385 ipTM=0.199 tol=6.29
2024-07-12 06:58:37,094 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=67.4 pTM=0.39 ipTM=0.224 tol=7.2
2024-07-12 06:59:16,382 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=67.6 pTM=0.384 ipTM=0.196 tol=5.93
2024-07-12 06:59:55,663 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=67.4 pTM=0.39 ipTM=0.225 tol=6.5
2024-07-12 07:00:34,917 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67.3 pTM=0.397 ipTM=0.244 tol=4.83
2024-07-12 07:01:14,199 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67.2 pTM=0.392 ipTM=0.228 tol=3.28
2024-07-12 07:01:53,466 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.2 pTM=0.39 ipTM=0.232 tol=2.96
2024-07-12 07:02:32,744 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.4 pTM=0.392 ipTM=0.219 tol=3.96
2024-07-12 07:03:12,017 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=67.2 pTM=0.393 ipTM=0.237 tol=2.88
2024-07-12 07:03:51,288 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=67.4 pTM=0.387 ipTM=0.21 tol=2.67
2024-07-12 07:04:30,529 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.3 pTM=0.395 ipTM=0.232 tol=4.72
2024-07-12 07:05:09,725 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.4 pTM=0.391 ipTM=0.227 tol=3.86
2024-07-12 07:05:49,047 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=67.4 pTM=0.393 ipTM=0.232 tol=3.98
2024-07-12 07:06:28,257 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=67.4 pTM=0.396 ipTM=0.242 tol=4.5
2024-07-12 07:07:07,507 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=67.4 pTM=0.399 ipTM=0.264 tol=3.59
2024-07-12 07:07:46,753 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=67.4 pTM=0.394 ipTM=0.237 tol=3.41
2024-07-12 07:08:26,021 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=67.3 pTM=0.393 ipTM=0.226 tol=4.88
2024-07-12 07:09:05,251 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=67.2 pTM=0.398 ipTM=0.265 tol=5.2
2024-07-12 07:09:44,474 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=67.4 pTM=0.404 ipTM=0.281 tol=3.24
2024-07-12 07:10:23,726 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=67.3 pTM=0.395 ipTM=0.238 tol=3.91
2024-07-12 07:11:02,995 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=67.3 pTM=0.392 ipTM=0.214 tol=4.98
2024-07-12 07:11:42,220 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=67.4 pTM=0.405 ipTM=0.282 tol=3.39
2024-07-12 07:12:21,423 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=67.4 pTM=0.409 ipTM=0.294 tol=5.55
2024-07-12 07:13:00,656 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=67.3 pTM=0.405 ipTM=0.269 tol=5.24
2024-07-12 07:13:39,917 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=67.1 pTM=0.389 ipTM=0.224 tol=4.54
2024-07-12 07:14:19,194 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67.2 pTM=0.399 ipTM=0.26 tol=4.39
2024-07-12 07:14:19,196 alphafold2_multimer_v3_model_5_seed_000 took 1217.0s (30 recycles)
2024-07-12 07:14:20,135 reranking models by 'multimer' metric
2024-07-12 07:14:27,152 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 07:17:02,578 Relaxation took 162.4s
2024-07-12 07:17:02,578 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=66.8 pTM=0.49 ipTM=0.439
2024-07-12 07:19:09,798 Relaxation took 127.2s
2024-07-12 07:19:09,798 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=69.8 pTM=0.403 ipTM=0.262
2024-07-12 07:21:10,431 Relaxation took 120.6s
2024-07-12 07:21:10,431 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67.2 pTM=0.399 ipTM=0.26
2024-07-12 07:22:48,475 Relaxation took 98.0s
2024-07-12 07:22:48,475 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=68.3 pTM=0.412 ipTM=0.217
2024-07-12 07:24:59,536 Relaxation took 131.1s
2024-07-12 07:24:59,536 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=68 pTM=0.385 ipTM=0.19
2024-07-12 07:25:03,646 Done