2024-07-12 05:25:45,729 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 05:25:46,042 Running on GPU
2024-07-12 05:26:02,287 Found 6 citations for tools or databases
2024-07-12 05:26:02,287 Query 1/1: PCMD2_TSPY3 (length 669)
2024-07-12 05:26:02,708 Sleeping for 10s. Reason: PENDING
2024-07-12 05:26:13,161 Sleeping for 9s. Reason: RUNNING
2024-07-12 05:26:22,604 Sleeping for 8s. Reason: RUNNING
2024-07-12 05:26:31,019 Sleeping for 6s. Reason: RUNNING
2024-07-12 05:26:37,452 Sleeping for 10s. Reason: RUNNING
2024-07-12 05:26:47,866 Sleeping for 7s. Reason: RUNNING
2024-07-12 05:26:55,319 Sleeping for 7s. Reason: RUNNING
2024-07-12 05:27:02,739 Sleeping for 8s. Reason: RUNNING
2024-07-12 05:27:11,186 Sleeping for 6s. Reason: RUNNING
2024-07-12 05:27:17,617 Sleeping for 8s. Reason: RUNNING
2024-07-12 05:27:26,061 Sleeping for 9s. Reason: RUNNING
2024-07-12 05:27:36,987 Sleeping for 8s. Reason: PENDING
2024-07-12 05:27:45,411 Sleeping for 7s. Reason: RUNNING
2024-07-12 05:27:52,840 Sleeping for 9s. Reason: RUNNING
2024-07-12 05:28:02,251 Sleeping for 7s. Reason: RUNNING
2024-07-12 05:28:09,677 Sleeping for 5s. Reason: RUNNING
2024-07-12 05:28:15,101 Sleeping for 7s. Reason: RUNNING
2024-07-12 05:28:22,514 Sleeping for 10s. Reason: RUNNING
2024-07-12 05:28:32,940 Sleeping for 10s. Reason: RUNNING
2024-07-12 05:28:43,376 Sleeping for 10s. Reason: RUNNING
2024-07-12 05:28:55,760 Setting max_seq=508, max_extra_seq=2048
2024-07-12 05:33:05,558 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=62.5 pTM=0.472 ipTM=0.133
2024-07-12 05:33:14,489 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=62.2 pTM=0.481 ipTM=0.136 tol=8.38
2024-07-12 05:33:23,439 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=63.2 pTM=0.48 ipTM=0.134 tol=8.05
2024-07-12 05:33:32,397 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=63.3 pTM=0.482 ipTM=0.145 tol=3.22
2024-07-12 05:33:41,369 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=63.2 pTM=0.483 ipTM=0.193 tol=3.82
2024-07-12 05:33:50,343 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=63.4 pTM=0.484 ipTM=0.184 tol=2.12
2024-07-12 05:33:59,337 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=63.7 pTM=0.484 ipTM=0.186 tol=3.44
2024-07-12 05:34:08,340 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=65 pTM=0.497 ipTM=0.236 tol=8.71
2024-07-12 05:34:17,354 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64.9 pTM=0.493 ipTM=0.211 tol=3.03
2024-07-12 05:34:26,363 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.9 pTM=0.497 ipTM=0.225 tol=2.35
2024-07-12 05:34:35,380 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=65.1 pTM=0.496 ipTM=0.235 tol=3.27
2024-07-12 05:34:44,397 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=65.5 pTM=0.503 ipTM=0.27 tol=1.95
2024-07-12 05:34:53,429 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=65.1 pTM=0.498 ipTM=0.243 tol=1.7
2024-07-12 05:35:02,437 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=65.1 pTM=0.501 ipTM=0.255 tol=2.1
2024-07-12 05:35:11,469 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=65.2 pTM=0.498 ipTM=0.243 tol=1.29
2024-07-12 05:35:20,486 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=65.6 pTM=0.502 ipTM=0.27 tol=1.3
2024-07-12 05:35:29,522 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=65.6 pTM=0.498 ipTM=0.25 tol=2.21
2024-07-12 05:35:38,556 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=65.8 pTM=0.5 ipTM=0.249 tol=1.51
2024-07-12 05:35:47,599 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.8 pTM=0.492 ipTM=0.223 tol=1.33
2024-07-12 05:35:56,622 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=65.2 pTM=0.496 ipTM=0.249 tol=1.27
2024-07-12 05:36:05,662 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=65.1 pTM=0.499 ipTM=0.249 tol=1.37
2024-07-12 05:36:14,697 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=65.3 pTM=0.5 ipTM=0.265 tol=1.26
2024-07-12 05:36:23,742 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=65.1 pTM=0.498 ipTM=0.26 tol=1.08
2024-07-12 05:36:32,785 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=65.3 pTM=0.503 ipTM=0.289 tol=1.3
2024-07-12 05:36:41,827 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=64.8 pTM=0.498 ipTM=0.256 tol=0.933
2024-07-12 05:36:50,865 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.7 pTM=0.498 ipTM=0.251 tol=0.813
2024-07-12 05:36:59,919 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=65 pTM=0.497 ipTM=0.242 tol=1.02
2024-07-12 05:37:08,964 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=65.2 pTM=0.5 ipTM=0.256 tol=0.86
2024-07-12 05:37:18,011 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=65.2 pTM=0.499 ipTM=0.249 tol=1.34
2024-07-12 05:37:27,060 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=65.2 pTM=0.499 ipTM=0.246 tol=1.03
2024-07-12 05:37:36,102 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=65 pTM=0.498 ipTM=0.246 tol=1.15
2024-07-12 05:37:36,103 alphafold2_multimer_v3_model_1_seed_000 took 444.5s (30 recycles)
2024-07-12 05:37:45,472 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=64 pTM=0.481 ipTM=0.152
2024-07-12 05:37:54,561 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=64.2 pTM=0.471 ipTM=0.122 tol=8.74
2024-07-12 05:38:03,654 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=65.6 pTM=0.469 ipTM=0.128 tol=6.63
2024-07-12 05:38:12,736 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=65.4 pTM=0.467 ipTM=0.124 tol=4.32
2024-07-12 05:38:21,817 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=65.6 pTM=0.464 ipTM=0.125 tol=3.04
2024-07-12 05:38:30,902 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=65.6 pTM=0.461 ipTM=0.125 tol=2.36
2024-07-12 05:38:39,990 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=66.1 pTM=0.462 ipTM=0.125 tol=1.65
2024-07-12 05:38:49,082 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=66.7 pTM=0.462 ipTM=0.127 tol=1.81
2024-07-12 05:38:58,158 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=66.6 pTM=0.461 ipTM=0.128 tol=1.39
2024-07-12 05:39:07,241 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=66.4 pTM=0.462 ipTM=0.126 tol=1.46
2024-07-12 05:39:16,329 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=66.8 pTM=0.464 ipTM=0.128 tol=1.68
2024-07-12 05:39:25,413 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=66.6 pTM=0.464 ipTM=0.129 tol=2.11
2024-07-12 05:39:34,479 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=66.6 pTM=0.463 ipTM=0.127 tol=3.45
2024-07-12 05:39:43,552 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=66.3 pTM=0.461 ipTM=0.129 tol=2.15
2024-07-12 05:39:52,632 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=66.6 pTM=0.462 ipTM=0.129 tol=1.84
2024-07-12 05:40:01,700 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=66.6 pTM=0.464 ipTM=0.128 tol=7.27
2024-07-12 05:40:10,777 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=66.9 pTM=0.465 ipTM=0.131 tol=3.48
2024-07-12 05:40:19,860 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=67 pTM=0.464 ipTM=0.128 tol=4.45
2024-07-12 05:40:28,948 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=66.8 pTM=0.463 ipTM=0.128 tol=2.83
2024-07-12 05:40:38,032 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=66.6 pTM=0.461 ipTM=0.128 tol=2.46
2024-07-12 05:40:47,107 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=66.6 pTM=0.463 ipTM=0.129 tol=4.13
2024-07-12 05:40:56,184 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=66.3 pTM=0.46 ipTM=0.128 tol=4.21
2024-07-12 05:41:05,259 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=66.5 pTM=0.461 ipTM=0.127 tol=3.45
2024-07-12 05:41:14,343 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=66.6 pTM=0.46 ipTM=0.128 tol=5.27
2024-07-12 05:41:23,432 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=66.6 pTM=0.461 ipTM=0.129 tol=2.45
2024-07-12 05:41:32,514 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=66.3 pTM=0.461 ipTM=0.13 tol=1.87
2024-07-12 05:41:41,593 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=66.6 pTM=0.462 ipTM=0.129 tol=3.51
2024-07-12 05:41:50,673 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=66.6 pTM=0.462 ipTM=0.129 tol=3.02
2024-07-12 05:41:59,757 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=66.9 pTM=0.465 ipTM=0.129 tol=3.46
2024-07-12 05:42:08,829 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=67 pTM=0.467 ipTM=0.13 tol=4.44
2024-07-12 05:42:17,907 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=66.5 pTM=0.464 ipTM=0.128 tol=2.33
2024-07-12 05:42:17,908 alphafold2_multimer_v3_model_2_seed_000 took 281.5s (30 recycles)
2024-07-12 05:42:27,284 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=63.3 pTM=0.474 ipTM=0.167
2024-07-12 05:42:36,399 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.9 pTM=0.554 ipTM=0.363 tol=10.5
2024-07-12 05:42:45,496 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=67.8 pTM=0.536 ipTM=0.448 tol=3.19
2024-07-12 05:42:54,581 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=67.1 pTM=0.513 ipTM=0.4 tol=5.81
2024-07-12 05:43:03,665 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=67.9 pTM=0.506 ipTM=0.339 tol=5.43
2024-07-12 05:43:12,758 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=67.2 pTM=0.495 ipTM=0.307 tol=2.04
2024-07-12 05:43:21,856 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=67.2 pTM=0.494 ipTM=0.271 tol=0.842
2024-07-12 05:43:30,965 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=67.1 pTM=0.491 ipTM=0.241 tol=1.82
2024-07-12 05:43:40,066 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=67.5 pTM=0.488 ipTM=0.195 tol=1.93
2024-07-12 05:43:49,165 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=66.6 pTM=0.485 ipTM=0.141 tol=2.33
2024-07-12 05:43:58,285 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=66.6 pTM=0.485 ipTM=0.123 tol=4.6
2024-07-12 05:44:07,391 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=66.4 pTM=0.486 ipTM=0.139 tol=2.1
2024-07-12 05:44:16,517 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=66.1 pTM=0.485 ipTM=0.126 tol=2.12
2024-07-12 05:44:25,630 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=65.9 pTM=0.484 ipTM=0.13 tol=2.6
2024-07-12 05:44:34,743 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=66.1 pTM=0.486 ipTM=0.13 tol=2.36
2024-07-12 05:44:43,855 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=65.8 pTM=0.485 ipTM=0.133 tol=3.39
2024-07-12 05:44:52,970 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=65.8 pTM=0.488 ipTM=0.153 tol=3.87
2024-07-12 05:45:02,081 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=66.1 pTM=0.492 ipTM=0.232 tol=3.3
2024-07-12 05:45:11,193 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=65.9 pTM=0.49 ipTM=0.177 tol=2.97
2024-07-12 05:45:20,305 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=65.7 pTM=0.489 ipTM=0.141 tol=2.65
2024-07-12 05:45:29,419 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=65.6 pTM=0.492 ipTM=0.143 tol=3.17
2024-07-12 05:45:38,524 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=65.7 pTM=0.49 ipTM=0.14 tol=3.09
2024-07-12 05:45:47,627 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=65.5 pTM=0.489 ipTM=0.14 tol=2.16
2024-07-12 05:45:56,729 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=65.8 pTM=0.49 ipTM=0.143 tol=1.32
2024-07-12 05:46:05,821 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=65.6 pTM=0.491 ipTM=0.143 tol=1.02
2024-07-12 05:46:14,919 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=65.4 pTM=0.49 ipTM=0.142 tol=1.65
2024-07-12 05:46:24,025 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=65.6 pTM=0.491 ipTM=0.142 tol=1.19
2024-07-12 05:46:33,130 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=65.9 pTM=0.491 ipTM=0.141 tol=0.797
2024-07-12 05:46:42,233 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=65.8 pTM=0.492 ipTM=0.143 tol=0.927
2024-07-12 05:46:51,342 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=66.1 pTM=0.492 ipTM=0.142 tol=0.795
2024-07-12 05:47:00,451 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=65.5 pTM=0.49 ipTM=0.139 tol=1.1
2024-07-12 05:47:00,452 alphafold2_multimer_v3_model_3_seed_000 took 282.3s (30 recycles)
2024-07-12 05:47:09,832 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=62 pTM=0.471 ipTM=0.136
2024-07-12 05:47:18,938 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=62.4 pTM=0.492 ipTM=0.152 tol=7.53
2024-07-12 05:47:28,050 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=63.9 pTM=0.491 ipTM=0.182 tol=6.56
2024-07-12 05:47:37,153 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64.1 pTM=0.478 ipTM=0.134 tol=7.06
2024-07-12 05:47:46,237 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=63.8 pTM=0.475 ipTM=0.162 tol=6.07
2024-07-12 05:47:55,333 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=64 pTM=0.471 ipTM=0.136 tol=6.09
2024-07-12 05:48:04,432 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=64.4 pTM=0.472 ipTM=0.135 tol=8.01
2024-07-12 05:48:13,528 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.6 pTM=0.479 ipTM=0.164 tol=5.12
2024-07-12 05:48:22,619 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=65.3 pTM=0.489 ipTM=0.301 tol=2.12
2024-07-12 05:48:31,714 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=64.6 pTM=0.479 ipTM=0.171 tol=1.25
2024-07-12 05:48:40,815 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=64.9 pTM=0.482 ipTM=0.148 tol=1.7
2024-07-12 05:48:49,907 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=64.6 pTM=0.482 ipTM=0.18 tol=1.6
2024-07-12 05:48:58,997 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=64.3 pTM=0.481 ipTM=0.212 tol=1.21
2024-07-12 05:49:08,078 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64.3 pTM=0.479 ipTM=0.179 tol=1.29
2024-07-12 05:49:17,165 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64.7 pTM=0.476 ipTM=0.151 tol=2.2
2024-07-12 05:49:26,232 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64.5 pTM=0.475 ipTM=0.166 tol=2.72
2024-07-12 05:49:35,313 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=65.1 pTM=0.48 ipTM=0.198 tol=1.47
2024-07-12 05:49:44,396 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=65.1 pTM=0.48 ipTM=0.186 tol=1.15
2024-07-12 05:49:53,477 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=64.9 pTM=0.478 ipTM=0.197 tol=0.754
2024-07-12 05:50:02,548 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.7 pTM=0.477 ipTM=0.194 tol=1.09
2024-07-12 05:50:11,633 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.6 pTM=0.476 ipTM=0.155 tol=1.94
2024-07-12 05:50:20,723 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=65.3 pTM=0.479 ipTM=0.176 tol=0.988
2024-07-12 05:50:29,803 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=64.9 pTM=0.476 ipTM=0.191 tol=2.05
2024-07-12 05:50:38,882 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=64.9 pTM=0.476 ipTM=0.159 tol=2.26
2024-07-12 05:50:47,964 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=65.1 pTM=0.476 ipTM=0.172 tol=1.47
2024-07-12 05:50:57,047 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64.8 pTM=0.477 ipTM=0.203 tol=1.15
2024-07-12 05:51:06,127 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=65.1 pTM=0.477 ipTM=0.16 tol=2.04
2024-07-12 05:51:15,216 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=65.4 pTM=0.48 ipTM=0.158 tol=1.65
2024-07-12 05:51:24,307 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=65.5 pTM=0.483 ipTM=0.19 tol=1.48
2024-07-12 05:51:33,398 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=65.4 pTM=0.481 ipTM=0.183 tol=1.01
2024-07-12 05:51:42,469 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=65.1 pTM=0.48 ipTM=0.162 tol=1.44
2024-07-12 05:51:42,470 alphafold2_multimer_v3_model_4_seed_000 took 281.7s (30 recycles)
2024-07-12 05:51:53,437 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=63.6 pTM=0.465 ipTM=0.122
2024-07-12 05:52:02,543 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=64.7 pTM=0.488 ipTM=0.142 tol=12.7
2024-07-12 05:52:11,654 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=64.7 pTM=0.482 ipTM=0.138 tol=5.44
2024-07-12 05:52:20,767 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=65.8 pTM=0.474 ipTM=0.122 tol=3.74
2024-07-12 05:52:29,881 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=66 pTM=0.478 ipTM=0.131 tol=4.57
2024-07-12 05:52:38,979 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=66.5 pTM=0.48 ipTM=0.134 tol=2.42
2024-07-12 05:52:48,106 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=66.5 pTM=0.481 ipTM=0.133 tol=3.53
2024-07-12 05:52:57,237 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=66.9 pTM=0.48 ipTM=0.132 tol=4.34
2024-07-12 05:53:06,358 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=66.9 pTM=0.479 ipTM=0.128 tol=3.91
2024-07-12 05:53:15,469 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=66.2 pTM=0.476 ipTM=0.124 tol=3.55
2024-07-12 05:53:24,594 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=66.3 pTM=0.476 ipTM=0.126 tol=4.16
2024-07-12 05:53:33,715 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=66.8 pTM=0.48 ipTM=0.137 tol=2.1
2024-07-12 05:53:42,839 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=66.5 pTM=0.483 ipTM=0.201 tol=4.35
2024-07-12 05:53:51,950 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=66.6 pTM=0.481 ipTM=0.172 tol=3.23
2024-07-12 05:54:01,078 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=66.7 pTM=0.478 ipTM=0.139 tol=2.58
2024-07-12 05:54:10,189 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=66.2 pTM=0.477 ipTM=0.128 tol=2.56
2024-07-12 05:54:19,307 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=66.5 pTM=0.475 ipTM=0.126 tol=3.25
2024-07-12 05:54:28,430 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=66.5 pTM=0.474 ipTM=0.124 tol=2.93
2024-07-12 05:54:37,538 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=66.3 pTM=0.472 ipTM=0.122 tol=1.91
2024-07-12 05:54:46,656 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=66.5 pTM=0.474 ipTM=0.126 tol=1.99
2024-07-12 05:54:55,774 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=66.3 pTM=0.476 ipTM=0.134 tol=2.76
2024-07-12 05:55:04,892 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=66.3 pTM=0.472 ipTM=0.124 tol=1.92
2024-07-12 05:55:14,006 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=66.3 pTM=0.473 ipTM=0.127 tol=1.36
2024-07-12 05:55:23,122 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=66.2 pTM=0.473 ipTM=0.129 tol=1.84
2024-07-12 05:55:32,244 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=66.2 pTM=0.475 ipTM=0.126 tol=1.26
2024-07-12 05:55:41,356 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=66.2 pTM=0.476 ipTM=0.132 tol=3.18
2024-07-12 05:55:50,474 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=66.3 pTM=0.479 ipTM=0.2 tol=2.04
2024-07-12 05:55:59,600 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=66.6 pTM=0.478 ipTM=0.191 tol=3.8
2024-07-12 05:56:08,729 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=66.6 pTM=0.479 ipTM=0.214 tol=3.84
2024-07-12 05:56:17,854 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=66.8 pTM=0.48 ipTM=0.178 tol=2.46
2024-07-12 05:56:26,982 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=66.4 pTM=0.477 ipTM=0.131 tol=2.46
2024-07-12 05:56:26,982 alphafold2_multimer_v3_model_5_seed_000 took 282.7s (30 recycles)
2024-07-12 05:56:27,269 reranking models by 'multimer' metric
2024-07-12 05:56:28,247 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 05:57:10,129 Relaxation took 42.9s
2024-07-12 05:57:10,129 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=65 pTM=0.498 ipTM=0.246
2024-07-12 05:57:57,378 Relaxation took 47.2s
2024-07-12 05:57:57,378 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=65.1 pTM=0.48 ipTM=0.162
2024-07-12 05:58:42,660 Relaxation took 45.3s
2024-07-12 05:58:42,660 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=65.5 pTM=0.49 ipTM=0.139
2024-07-12 05:59:00,116 Relaxation took 17.5s
2024-07-12 05:59:00,116 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=66.4 pTM=0.477 ipTM=0.131
2024-07-12 05:59:36,172 Relaxation took 36.1s
2024-07-12 05:59:36,172 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=66.5 pTM=0.464 ipTM=0.128
2024-07-12 05:59:38,269 Done