2024-07-12 06:02:48,207 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 06:02:48,508 Running on GPU
2024-07-12 06:02:58,292 Found 6 citations for tools or databases
2024-07-12 06:02:58,292 Query 1/1: PDZD7_PSG11 (length 1368)
2024-07-12 06:02:58,761 Sleeping for 8s. Reason: PENDING
2024-07-12 06:03:07,173 Sleeping for 8s. Reason: RUNNING
2024-07-12 06:03:15,595 Sleeping for 9s. Reason: RUNNING
2024-07-12 06:03:25,013 Sleeping for 8s. Reason: RUNNING
2024-07-12 06:03:33,433 Sleeping for 8s. Reason: RUNNING
2024-07-12 06:03:41,853 Sleeping for 5s. Reason: RUNNING
2024-07-12 06:03:47,269 Sleeping for 10s. Reason: RUNNING
2024-07-12 06:03:57,694 Sleeping for 10s. Reason: RUNNING
2024-07-12 06:04:08,105 Sleeping for 8s. Reason: RUNNING
2024-07-12 06:04:16,541 Sleeping for 5s. Reason: RUNNING
2024-07-12 06:04:21,966 Sleeping for 8s. Reason: RUNNING
2024-07-12 06:04:30,376 Sleeping for 5s. Reason: RUNNING
2024-07-12 06:04:35,794 Sleeping for 6s. Reason: RUNNING
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2024-07-12 06:04:48,635 Sleeping for 10s. Reason: RUNNING
2024-07-12 06:04:59,059 Sleeping for 7s. Reason: RUNNING
2024-07-12 06:05:06,490 Sleeping for 10s. Reason: RUNNING
2024-07-12 06:05:16,922 Sleeping for 7s. Reason: RUNNING
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2024-07-12 06:05:41,186 Sleeping for 6s. Reason: RUNNING
2024-07-12 06:05:47,634 Sleeping for 10s. Reason: RUNNING
2024-07-12 06:05:58,065 Sleeping for 9s. Reason: RUNNING
2024-07-12 06:06:07,513 Sleeping for 9s. Reason: RUNNING
2024-07-12 06:06:16,958 Sleeping for 6s. Reason: RUNNING
2024-07-12 06:06:23,390 Sleeping for 5s. Reason: RUNNING
2024-07-12 06:06:28,811 Sleeping for 7s. Reason: RUNNING
2024-07-12 06:06:36,242 Sleeping for 10s. Reason: RUNNING
2024-07-12 06:06:46,695 Sleeping for 5s. Reason: RUNNING
2024-07-12 06:06:52,126 Sleeping for 7s. Reason: RUNNING
2024-07-12 06:06:59,813 Sleeping for 10s. Reason: RUNNING
2024-07-12 06:07:10,234 Sleeping for 8s. Reason: RUNNING
2024-07-12 06:07:18,686 Sleeping for 8s. Reason: RUNNING
2024-07-12 06:07:27,108 Sleeping for 10s. Reason: RUNNING
2024-07-12 06:07:37,537 Sleeping for 7s. Reason: RUNNING
2024-07-12 06:07:44,965 Sleeping for 6s. Reason: RUNNING
2024-07-12 06:07:51,391 Sleeping for 8s. Reason: RUNNING
2024-07-12 06:08:03,403 Sleeping for 10s. Reason: PENDING
2024-07-12 06:08:13,821 Sleeping for 5s. Reason: RUNNING
2024-07-12 06:08:19,235 Sleeping for 10s. Reason: RUNNING
2024-07-12 06:08:29,655 Sleeping for 5s. Reason: RUNNING
2024-07-12 06:08:35,061 Sleeping for 9s. Reason: RUNNING
2024-07-12 06:08:44,477 Sleeping for 8s. Reason: RUNNING
2024-07-12 06:08:52,899 Sleeping for 5s. Reason: RUNNING
2024-07-12 06:08:58,316 Sleeping for 7s. Reason: RUNNING
2024-07-12 06:09:05,761 Sleeping for 7s. Reason: RUNNING
2024-07-12 06:09:13,191 Sleeping for 10s. Reason: RUNNING
2024-07-12 06:09:23,618 Sleeping for 10s. Reason: RUNNING
2024-07-12 06:09:34,069 Sleeping for 10s. Reason: RUNNING
2024-07-12 06:09:44,497 Sleeping for 5s. Reason: RUNNING
2024-07-12 06:09:49,939 Sleeping for 8s. Reason: RUNNING
2024-07-12 06:09:58,405 Sleeping for 7s. Reason: RUNNING
2024-07-12 06:10:05,855 Sleeping for 8s. Reason: RUNNING
2024-07-12 06:10:14,279 Sleeping for 9s. Reason: RUNNING
2024-07-12 06:10:27,921 Setting max_seq=508, max_extra_seq=2048
2024-07-12 06:14:06,858 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=48.1 pTM=0.264 ipTM=0.177
2024-07-12 06:14:55,387 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=46.8 pTM=0.259 ipTM=0.198 tol=16.4
2024-07-12 06:15:44,060 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=45.8 pTM=0.253 ipTM=0.227 tol=15.9
2024-07-12 06:16:32,705 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=47.1 pTM=0.255 ipTM=0.215 tol=11.2
2024-07-12 06:17:21,351 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=47.4 pTM=0.254 ipTM=0.193 tol=9.15
2024-07-12 06:18:10,032 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=47.1 pTM=0.253 ipTM=0.202 tol=5.24
2024-07-12 06:18:58,687 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=47.4 pTM=0.254 ipTM=0.191 tol=4.58
2024-07-12 06:19:47,381 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=47 pTM=0.25 ipTM=0.196 tol=7.12
2024-07-12 06:20:36,058 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=47.1 pTM=0.252 ipTM=0.197 tol=7.13
2024-07-12 06:21:24,743 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=46.9 pTM=0.25 ipTM=0.204 tol=6.81
2024-07-12 06:22:13,421 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=47.9 pTM=0.256 ipTM=0.192 tol=8.2
2024-07-12 06:23:02,163 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=47.8 pTM=0.256 ipTM=0.19 tol=4.62
2024-07-12 06:23:50,847 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=47.5 pTM=0.254 ipTM=0.195 tol=3.95
2024-07-12 06:24:39,549 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=47.8 pTM=0.255 ipTM=0.191 tol=4.68
2024-07-12 06:25:28,284 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=47.7 pTM=0.255 ipTM=0.194 tol=7.52
2024-07-12 06:26:17,008 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=47.4 pTM=0.253 ipTM=0.189 tol=7.07
2024-07-12 06:27:05,761 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=47.2 pTM=0.251 ipTM=0.197 tol=5.27
2024-07-12 06:27:54,496 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=47.6 pTM=0.255 ipTM=0.189 tol=6.24
2024-07-12 06:28:43,191 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=47.5 pTM=0.256 ipTM=0.191 tol=4.47
2024-07-12 06:29:31,950 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=47.3 pTM=0.251 ipTM=0.194 tol=5.76
2024-07-12 06:30:20,624 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=47.5 pTM=0.253 ipTM=0.196 tol=7.65
2024-07-12 06:31:09,354 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=47.5 pTM=0.253 ipTM=0.191 tol=5.28
2024-07-12 06:31:58,035 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=47.6 pTM=0.254 ipTM=0.192 tol=5.07
2024-07-12 06:32:46,714 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=47.9 pTM=0.259 ipTM=0.186 tol=2.75
2024-07-12 06:33:35,417 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=47.8 pTM=0.258 ipTM=0.188 tol=2.13
2024-07-12 06:34:24,105 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=47.5 pTM=0.252 ipTM=0.185 tol=5.75
2024-07-12 06:35:12,777 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=46.6 pTM=0.252 ipTM=0.187 tol=4.65
2024-07-12 06:36:01,447 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=47.8 pTM=0.254 ipTM=0.183 tol=9.68
2024-07-12 06:36:50,164 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=47.8 pTM=0.259 ipTM=0.191 tol=7.34
2024-07-12 06:37:38,828 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=47.5 pTM=0.255 ipTM=0.187 tol=4.2
2024-07-12 06:38:27,539 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=47.3 pTM=0.252 ipTM=0.196 tol=4.5
2024-07-12 06:38:27,540 alphafold2_multimer_v3_model_1_seed_000 took 1623.2s (30 recycles)
2024-07-12 06:39:19,261 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=48.1 pTM=0.266 ipTM=0.19
2024-07-12 06:40:08,033 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=49.1 pTM=0.271 ipTM=0.191 tol=19.2
2024-07-12 06:40:56,755 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=48.9 pTM=0.269 ipTM=0.194 tol=13.4
2024-07-12 06:41:45,464 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=49.2 pTM=0.277 ipTM=0.212 tol=14.4
2024-07-12 06:42:34,235 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=50 pTM=0.283 ipTM=0.211 tol=18.5
2024-07-12 06:43:22,956 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=50.2 pTM=0.272 ipTM=0.202 tol=11
2024-07-12 06:44:11,736 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=49.9 pTM=0.27 ipTM=0.183 tol=10.3
2024-07-12 06:45:00,465 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=50.2 pTM=0.274 ipTM=0.206 tol=9.03
2024-07-12 06:45:49,157 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=49.8 pTM=0.265 ipTM=0.187 tol=7.96
2024-07-12 06:46:37,881 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=49.7 pTM=0.266 ipTM=0.187 tol=5.57
2024-07-12 06:47:26,604 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=50.2 pTM=0.272 ipTM=0.196 tol=4.22
2024-07-12 06:48:15,346 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=49.8 pTM=0.272 ipTM=0.195 tol=5.15
2024-07-12 06:49:04,018 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=49.6 pTM=0.261 ipTM=0.182 tol=7.07
2024-07-12 06:49:52,681 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=50.5 pTM=0.28 ipTM=0.224 tol=5.91
2024-07-12 06:50:41,347 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=50.2 pTM=0.27 ipTM=0.201 tol=5.94
2024-07-12 06:51:30,051 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=49.9 pTM=0.268 ipTM=0.187 tol=5.2
2024-07-12 06:52:18,691 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=50.3 pTM=0.276 ipTM=0.206 tol=3.68
2024-07-12 06:53:07,392 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=49.9 pTM=0.271 ipTM=0.192 tol=3.61
2024-07-12 06:53:56,077 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=49.9 pTM=0.265 ipTM=0.189 tol=4.17
2024-07-12 06:54:44,822 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=50.2 pTM=0.275 ipTM=0.207 tol=5.35
2024-07-12 06:55:33,456 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=50.4 pTM=0.272 ipTM=0.206 tol=7.68
2024-07-12 06:56:22,167 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=49.8 pTM=0.268 ipTM=0.19 tol=5.41
2024-07-12 06:57:10,909 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=49.9 pTM=0.273 ipTM=0.206 tol=4.72
2024-07-12 06:57:59,600 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=49.9 pTM=0.271 ipTM=0.205 tol=5.76
2024-07-12 06:58:48,286 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=50.2 pTM=0.275 ipTM=0.217 tol=4.95
2024-07-12 06:59:36,971 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=49.9 pTM=0.269 ipTM=0.206 tol=2.71
2024-07-12 07:00:25,724 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=50.2 pTM=0.272 ipTM=0.212 tol=3.62
2024-07-12 07:01:14,432 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=49.8 pTM=0.269 ipTM=0.205 tol=2.93
2024-07-12 07:02:03,129 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=50.2 pTM=0.274 ipTM=0.221 tol=2.29
2024-07-12 07:02:51,831 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=49.6 pTM=0.268 ipTM=0.204 tol=2.78
2024-07-12 07:03:40,542 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=49.9 pTM=0.273 ipTM=0.218 tol=2.81
2024-07-12 07:03:40,543 alphafold2_multimer_v3_model_2_seed_000 took 1509.8s (30 recycles)
2024-07-12 07:04:30,441 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=47.7 pTM=0.273 ipTM=0.173
2024-07-12 07:05:19,321 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=47.2 pTM=0.264 ipTM=0.176 tol=17.2
2024-07-12 07:06:08,166 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=46.8 pTM=0.259 ipTM=0.198 tol=16.5
2024-07-12 07:06:56,994 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=47 pTM=0.261 ipTM=0.179 tol=14.8
2024-07-12 07:07:45,854 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=47.4 pTM=0.261 ipTM=0.175 tol=13.4
2024-07-12 07:08:34,665 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=47.4 pTM=0.259 ipTM=0.176 tol=15
2024-07-12 07:09:23,521 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=47.3 pTM=0.26 ipTM=0.172 tol=9.93
2024-07-12 07:10:12,374 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=47.3 pTM=0.262 ipTM=0.168 tol=4.46
2024-07-12 07:11:01,252 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=47.5 pTM=0.261 ipTM=0.169 tol=6.65
2024-07-12 07:11:50,053 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=47.6 pTM=0.264 ipTM=0.171 tol=6.89
2024-07-12 07:12:38,905 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=47.8 pTM=0.266 ipTM=0.169 tol=6.89
2024-07-12 07:13:27,754 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=47.9 pTM=0.268 ipTM=0.17 tol=4.11
2024-07-12 07:14:16,545 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=47.9 pTM=0.27 ipTM=0.17 tol=5.03
2024-07-12 07:15:05,315 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=48 pTM=0.272 ipTM=0.17 tol=5.7
2024-07-12 07:15:54,106 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=48.1 pTM=0.273 ipTM=0.169 tol=5.51
2024-07-12 07:16:42,903 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=48 pTM=0.276 ipTM=0.172 tol=5.3
2024-07-12 07:17:31,694 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=48.1 pTM=0.277 ipTM=0.171 tol=5.07
2024-07-12 07:18:20,528 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=48.1 pTM=0.278 ipTM=0.173 tol=4.71
2024-07-12 07:19:09,361 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=48.1 pTM=0.277 ipTM=0.172 tol=3.24
2024-07-12 07:19:58,142 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=48.2 pTM=0.277 ipTM=0.171 tol=4.44
2024-07-12 07:20:46,983 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=48.3 pTM=0.279 ipTM=0.173 tol=3.81
2024-07-12 07:21:35,818 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=48.4 pTM=0.28 ipTM=0.171 tol=7.89
2024-07-12 07:22:24,599 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=48.5 pTM=0.28 ipTM=0.171 tol=6.99
2024-07-12 07:23:13,396 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=48.3 pTM=0.281 ipTM=0.172 tol=9.12
2024-07-12 07:24:02,260 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=48.5 pTM=0.281 ipTM=0.17 tol=4.98
2024-07-12 07:24:51,164 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=48.5 pTM=0.279 ipTM=0.171 tol=2.46
2024-07-12 07:25:40,031 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=48.3 pTM=0.281 ipTM=0.172 tol=5.3
2024-07-12 07:26:28,860 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=48.4 pTM=0.282 ipTM=0.172 tol=3.56
2024-07-12 07:27:17,722 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=48.5 pTM=0.281 ipTM=0.171 tol=4.11
2024-07-12 07:28:06,542 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=48.3 pTM=0.284 ipTM=0.174 tol=9.12
2024-07-12 07:28:55,354 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=48.5 pTM=0.283 ipTM=0.172 tol=6.98
2024-07-12 07:28:55,355 alphafold2_multimer_v3_model_3_seed_000 took 1513.7s (30 recycles)
2024-07-12 07:29:45,208 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=45.4 pTM=0.251 ipTM=0.223
2024-07-12 07:30:34,029 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=45.3 pTM=0.246 ipTM=0.24 tol=20.7
2024-07-12 07:31:22,915 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=44.6 pTM=0.244 ipTM=0.2 tol=17.1
2024-07-12 07:32:11,813 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=46.2 pTM=0.254 ipTM=0.202 tol=16.9
2024-07-12 07:33:00,581 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=45.7 pTM=0.251 ipTM=0.196 tol=15.7
2024-07-12 07:33:49,418 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=44.6 pTM=0.25 ipTM=0.198 tol=10.3
2024-07-12 07:34:38,269 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=44.8 pTM=0.253 ipTM=0.2 tol=12.6
2024-07-12 07:35:27,049 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=44.5 pTM=0.251 ipTM=0.19 tol=14.3
2024-07-12 07:36:15,894 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=45.4 pTM=0.261 ipTM=0.242 tol=12.6
2024-07-12 07:37:04,677 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=45.5 pTM=0.256 ipTM=0.192 tol=11.2
2024-07-12 07:37:53,423 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=44.9 pTM=0.258 ipTM=0.196 tol=9.52
2024-07-12 07:38:42,227 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=45.2 pTM=0.257 ipTM=0.22 tol=6.69
2024-07-12 07:39:31,063 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=45.4 pTM=0.26 ipTM=0.222 tol=10.4
2024-07-12 07:40:19,835 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=45.1 pTM=0.254 ipTM=0.194 tol=10.1
2024-07-12 07:41:08,623 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=45.7 pTM=0.256 ipTM=0.227 tol=9.04
2024-07-12 07:41:57,427 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=45.2 pTM=0.253 ipTM=0.188 tol=7.25
2024-07-12 07:42:46,230 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=45 pTM=0.256 ipTM=0.197 tol=9.99
2024-07-12 07:43:35,056 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=44.8 pTM=0.255 ipTM=0.192 tol=11.4
2024-07-12 07:44:23,820 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=44.8 pTM=0.253 ipTM=0.19 tol=12.9
2024-07-12 07:45:12,592 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=44.4 pTM=0.253 ipTM=0.188 tol=11.1
2024-07-12 07:46:01,367 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=45.4 pTM=0.253 ipTM=0.21 tol=7.04
2024-07-12 07:46:50,202 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=44.9 pTM=0.253 ipTM=0.189 tol=6.69
2024-07-12 07:47:38,964 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=45.2 pTM=0.257 ipTM=0.194 tol=7.21
2024-07-12 07:48:27,795 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=45.2 pTM=0.257 ipTM=0.191 tol=8.98
2024-07-12 07:49:16,578 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=45.3 pTM=0.256 ipTM=0.198 tol=10.8
2024-07-12 07:50:05,394 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=45.2 pTM=0.258 ipTM=0.189 tol=12.2
2024-07-12 07:50:54,215 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=45 pTM=0.254 ipTM=0.202 tol=11.2
2024-07-12 07:51:42,968 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=45.4 pTM=0.255 ipTM=0.193 tol=10.3
2024-07-12 07:52:31,758 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=44.8 pTM=0.258 ipTM=0.207 tol=7.59
2024-07-12 07:53:20,539 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=45.5 pTM=0.257 ipTM=0.199 tol=7.77
2024-07-12 07:54:09,244 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=44.8 pTM=0.255 ipTM=0.196 tol=6.89
2024-07-12 07:54:09,246 alphafold2_multimer_v3_model_4_seed_000 took 1512.8s (30 recycles)
2024-07-12 07:54:59,182 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=45.6 pTM=0.265 ipTM=0.227
2024-07-12 07:55:48,054 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=47.5 pTM=0.265 ipTM=0.183 tol=18.3
2024-07-12 07:56:36,991 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=48.7 pTM=0.286 ipTM=0.213 tol=19.1
2024-07-12 07:57:25,833 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=48.8 pTM=0.272 ipTM=0.205 tol=15.2
2024-07-12 07:58:14,578 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=50.7 pTM=0.319 ipTM=0.377 tol=11.8
2024-07-12 07:59:03,326 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=49.9 pTM=0.308 ipTM=0.31 tol=10.2
2024-07-12 07:59:52,143 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=49.1 pTM=0.288 ipTM=0.261 tol=9.48
2024-07-12 08:00:40,933 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=48.5 pTM=0.276 ipTM=0.217 tol=8.41
2024-07-12 08:01:29,770 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=48.1 pTM=0.267 ipTM=0.221 tol=7.99
2024-07-12 08:02:18,631 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=48.4 pTM=0.267 ipTM=0.19 tol=12.3
2024-07-12 08:03:07,496 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=48.2 pTM=0.264 ipTM=0.201 tol=10.7
2024-07-12 08:03:56,353 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=48.4 pTM=0.268 ipTM=0.194 tol=7.18
2024-07-12 08:04:45,194 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=48.3 pTM=0.265 ipTM=0.199 tol=5.69
2024-07-12 08:05:34,063 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=48.1 pTM=0.265 ipTM=0.179 tol=5.65
2024-07-12 08:06:22,925 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=48.1 pTM=0.265 ipTM=0.182 tol=5.1
2024-07-12 08:07:11,761 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=48.2 pTM=0.263 ipTM=0.175 tol=9.65
2024-07-12 08:08:00,649 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=47.8 pTM=0.267 ipTM=0.175 tol=8.96
2024-07-12 08:08:49,470 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=48 pTM=0.265 ipTM=0.172 tol=9.22
2024-07-12 08:09:38,344 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=48 pTM=0.267 ipTM=0.181 tol=6.79
2024-07-12 08:10:27,175 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=47.9 pTM=0.265 ipTM=0.175 tol=5.2
2024-07-12 08:11:16,004 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=47.9 pTM=0.266 ipTM=0.175 tol=5.06
2024-07-12 08:12:04,841 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=48.4 pTM=0.269 ipTM=0.177 tol=9.27
2024-07-12 08:12:53,632 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=48.1 pTM=0.267 ipTM=0.189 tol=11.1
2024-07-12 08:13:42,451 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=48.2 pTM=0.268 ipTM=0.184 tol=10.5
2024-07-12 08:14:31,272 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=48.2 pTM=0.268 ipTM=0.174 tol=11.2
2024-07-12 08:15:20,164 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=48.3 pTM=0.267 ipTM=0.179 tol=9.3
2024-07-12 08:16:09,022 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=48.2 pTM=0.269 ipTM=0.176 tol=10.1
2024-07-12 08:16:57,866 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=48.3 pTM=0.269 ipTM=0.179 tol=5.55
2024-07-12 08:17:46,708 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=48.4 pTM=0.271 ipTM=0.183 tol=10.9
2024-07-12 08:18:35,565 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=48.3 pTM=0.27 ipTM=0.176 tol=10.9
2024-07-12 08:19:24,401 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=48.3 pTM=0.27 ipTM=0.192 tol=6.38
2024-07-12 08:19:24,402 alphafold2_multimer_v3_model_5_seed_000 took 1514.0s (30 recycles)
2024-07-12 08:19:27,929 reranking models by 'multimer' metric
2024-07-12 08:19:45,125 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 08:22:35,954 Relaxation took 188.0s
2024-07-12 08:22:35,954 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=49.9 pTM=0.273 ipTM=0.218
2024-07-12 08:24:58,418 Relaxation took 142.5s
2024-07-12 08:24:58,419 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=44.8 pTM=0.255 ipTM=0.196
2024-07-12 08:27:32,290 Relaxation took 153.9s
2024-07-12 08:27:32,290 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=48.3 pTM=0.27 ipTM=0.192
2024-07-12 08:31:12,557 Relaxation took 220.3s
2024-07-12 08:31:12,558 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=47.3 pTM=0.252 ipTM=0.196
2024-07-12 08:33:51,185 Relaxation took 158.6s
2024-07-12 08:33:51,185 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=48.5 pTM=0.283 ipTM=0.172
2024-07-12 08:33:59,347 Done