2024-07-12 06:20:43,788 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-12 06:20:44,140 Running on GPU 2024-07-12 06:21:01,183 Found 6 citations for tools or databases 2024-07-12 06:21:01,183 Query 1/1: PE2R3_DAPK2 (length 760) 2024-07-12 06:21:01,701 Sleeping for 10s. Reason: PENDING 2024-07-12 06:21:12,132 Sleeping for 5s. Reason: RUNNING 2024-07-12 06:21:17,542 Sleeping for 8s. Reason: RUNNING 2024-07-12 06:21:25,950 Sleeping for 8s. Reason: RUNNING 2024-07-12 06:21:34,373 Sleeping for 8s. Reason: RUNNING 2024-07-12 06:21:42,817 Sleeping for 10s. Reason: RUNNING 2024-07-12 06:21:53,240 Sleeping for 5s. Reason: RUNNING 2024-07-12 06:21:58,679 Sleeping for 10s. Reason: RUNNING 2024-07-12 06:22:09,100 Sleeping for 8s. Reason: RUNNING 2024-07-12 06:22:17,525 Sleeping for 5s. Reason: RUNNING 2024-07-12 06:22:22,950 Sleeping for 8s. Reason: RUNNING 2024-07-12 06:22:31,363 Sleeping for 10s. Reason: RUNNING 2024-07-12 06:22:41,778 Sleeping for 8s. Reason: RUNNING 2024-07-12 06:22:50,188 Sleeping for 6s. Reason: RUNNING 2024-07-12 06:22:56,610 Sleeping for 8s. Reason: RUNNING 2024-07-12 06:23:05,040 Sleeping for 9s. Reason: RUNNING 2024-07-12 06:23:14,458 Sleeping for 6s. Reason: RUNNING 2024-07-12 06:23:20,870 Sleeping for 5s. Reason: RUNNING 2024-07-12 06:23:26,291 Sleeping for 8s. Reason: RUNNING 2024-07-12 06:23:34,709 Sleeping for 10s. Reason: RUNNING 2024-07-12 06:23:45,144 Sleeping for 7s. Reason: RUNNING 2024-07-12 06:23:52,574 Sleeping for 8s. Reason: RUNNING 2024-07-12 06:24:00,989 Sleeping for 10s. Reason: RUNNING 2024-07-12 06:24:11,408 Sleeping for 10s. Reason: RUNNING 2024-07-12 06:24:21,857 Sleeping for 10s. Reason: RUNNING 2024-07-12 06:24:32,276 Sleeping for 5s. Reason: RUNNING 2024-07-12 06:24:37,702 Sleeping for 6s. Reason: RUNNING 2024-07-12 06:24:44,118 Sleeping for 10s. Reason: RUNNING 2024-07-12 06:24:56,367 Sleeping for 9s. Reason: PENDING 2024-07-12 06:25:05,797 Sleeping for 6s. Reason: RUNNING 2024-07-12 06:25:12,210 Sleeping for 6s. Reason: RUNNING 2024-07-12 06:25:18,628 Sleeping for 5s. Reason: RUNNING 2024-07-12 06:25:24,056 Sleeping for 7s. Reason: RUNNING 2024-07-12 06:25:31,476 Sleeping for 7s. Reason: RUNNING 2024-07-12 06:25:38,901 Sleeping for 5s. Reason: RUNNING 2024-07-12 06:25:44,324 Sleeping for 10s. Reason: RUNNING 2024-07-12 06:25:54,774 Sleeping for 8s. Reason: RUNNING 2024-07-12 06:26:03,206 Sleeping for 10s. Reason: RUNNING 2024-07-12 06:26:13,626 Sleeping for 5s. Reason: RUNNING 2024-07-12 06:26:19,048 Sleeping for 6s. Reason: RUNNING 2024-07-12 06:26:25,477 Sleeping for 6s. Reason: RUNNING 2024-07-12 06:26:31,905 Sleeping for 10s. Reason: RUNNING 2024-07-12 06:26:42,346 Sleeping for 5s. Reason: RUNNING 2024-07-12 06:26:47,774 Sleeping for 5s. Reason: RUNNING 2024-07-12 06:26:56,016 Setting max_seq=508, max_extra_seq=2048 2024-07-12 06:30:05,090 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=68.3 pTM=0.453 ipTM=0.158 2024-07-12 06:30:15,827 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=70.9 pTM=0.461 ipTM=0.162 tol=9.43 2024-07-12 06:30:26,583 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=70.8 pTM=0.457 ipTM=0.156 tol=6.2 2024-07-12 06:30:37,357 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=70.8 pTM=0.452 ipTM=0.153 tol=1.76 2024-07-12 06:30:48,143 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=70.8 pTM=0.45 ipTM=0.154 tol=2.56 2024-07-12 06:30:58,948 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=70.6 pTM=0.449 ipTM=0.153 tol=1.83 2024-07-12 06:31:09,773 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=70.8 pTM=0.45 ipTM=0.153 tol=3.74 2024-07-12 06:31:20,614 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=70.8 pTM=0.45 ipTM=0.151 tol=2.54 2024-07-12 06:31:31,453 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=70.4 pTM=0.451 ipTM=0.156 tol=1.39 2024-07-12 06:31:42,300 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=70.6 pTM=0.451 ipTM=0.155 tol=1.87 2024-07-12 06:31:53,156 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=70.4 pTM=0.45 ipTM=0.154 tol=2.01 2024-07-12 06:32:04,017 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=70.4 pTM=0.45 ipTM=0.153 tol=1.92 2024-07-12 06:32:14,873 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=70.4 pTM=0.449 ipTM=0.155 tol=1.86 2024-07-12 06:32:25,723 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=70.2 pTM=0.449 ipTM=0.15 tol=2.89 2024-07-12 06:32:36,590 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=70.2 pTM=0.449 ipTM=0.153 tol=3.14 2024-07-12 06:32:47,464 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=70.6 pTM=0.448 ipTM=0.151 tol=1.6 2024-07-12 06:32:58,363 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=70.3 pTM=0.449 ipTM=0.154 tol=0.73 2024-07-12 06:33:09,237 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=70.4 pTM=0.45 ipTM=0.155 tol=2.42 2024-07-12 06:33:20,132 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=70.4 pTM=0.448 ipTM=0.151 tol=1.13 2024-07-12 06:33:31,010 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=70.4 pTM=0.45 ipTM=0.153 tol=3.05 2024-07-12 06:33:41,903 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=70.2 pTM=0.449 ipTM=0.154 tol=2.16 2024-07-12 06:33:52,787 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=70.4 pTM=0.45 ipTM=0.154 tol=1.19 2024-07-12 06:34:03,678 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=70.4 pTM=0.45 ipTM=0.152 tol=1.24 2024-07-12 06:34:14,558 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=70.2 pTM=0.449 ipTM=0.154 tol=2.9 2024-07-12 06:34:25,453 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=70.2 pTM=0.449 ipTM=0.153 tol=1.58 2024-07-12 06:34:36,351 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=70.5 pTM=0.45 ipTM=0.153 tol=1.63 2024-07-12 06:34:47,242 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=70.3 pTM=0.45 ipTM=0.152 tol=1.35 2024-07-12 06:34:58,141 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=70.2 pTM=0.45 ipTM=0.155 tol=1.22 2024-07-12 06:35:09,041 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=70.2 pTM=0.449 ipTM=0.153 tol=2.26 2024-07-12 06:35:19,937 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=70.1 pTM=0.449 ipTM=0.155 tol=1.79 2024-07-12 06:35:30,837 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=70.4 pTM=0.45 ipTM=0.153 tol=2.36 2024-07-12 06:35:30,837 alphafold2_multimer_v3_model_1_seed_000 took 445.7s (30 recycles) 2024-07-12 06:35:42,115 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=69.2 pTM=0.463 ipTM=0.196 2024-07-12 06:35:53,044 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=71.7 pTM=0.467 ipTM=0.184 tol=4.18 2024-07-12 06:36:03,975 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=71.4 pTM=0.464 ipTM=0.175 tol=5.35 2024-07-12 06:36:14,911 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=71.6 pTM=0.464 ipTM=0.176 tol=3 2024-07-12 06:36:25,827 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=71.4 pTM=0.462 ipTM=0.176 tol=0.998 2024-07-12 06:36:36,739 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=71.6 pTM=0.466 ipTM=0.183 tol=2.14 2024-07-12 06:36:47,656 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=70.2 pTM=0.465 ipTM=0.179 tol=5.59 2024-07-12 06:36:58,559 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=72 pTM=0.467 ipTM=0.183 tol=5.85 2024-07-12 06:37:09,469 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=71.8 pTM=0.466 ipTM=0.182 tol=2.02 2024-07-12 06:37:20,385 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=72.1 pTM=0.468 ipTM=0.181 tol=1.77 2024-07-12 06:37:31,281 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=71.4 pTM=0.462 ipTM=0.178 tol=1.74 2024-07-12 06:37:42,178 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=71.9 pTM=0.467 ipTM=0.181 tol=1.84 2024-07-12 06:37:53,071 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=71.4 pTM=0.463 ipTM=0.179 tol=1.82 2024-07-12 06:38:03,970 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=71.9 pTM=0.468 ipTM=0.184 tol=1.79 2024-07-12 06:38:14,867 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=71.6 pTM=0.465 ipTM=0.179 tol=1.42 2024-07-12 06:38:25,764 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=71.8 pTM=0.467 ipTM=0.18 tol=1.2 2024-07-12 06:38:36,656 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=71.6 pTM=0.469 ipTM=0.186 tol=1.71 2024-07-12 06:38:47,535 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=71.6 pTM=0.467 ipTM=0.184 tol=2.22 2024-07-12 06:38:58,473 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=71.3 pTM=0.464 ipTM=0.18 tol=0.943 2024-07-12 06:39:09,366 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=71.7 pTM=0.468 ipTM=0.185 tol=0.686 2024-07-12 06:39:20,264 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=71.5 pTM=0.467 ipTM=0.184 tol=2.07 2024-07-12 06:39:31,157 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=71.8 pTM=0.467 ipTM=0.181 tol=0.858 2024-07-12 06:39:42,047 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=71.4 pTM=0.466 ipTM=0.181 tol=1.66 2024-07-12 06:39:52,935 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=71.7 pTM=0.465 ipTM=0.18 tol=2.47 2024-07-12 06:40:03,854 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=71.4 pTM=0.464 ipTM=0.18 tol=2.02 2024-07-12 06:40:14,749 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=71.7 pTM=0.468 ipTM=0.188 tol=1.89 2024-07-12 06:40:25,644 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=71.3 pTM=0.465 ipTM=0.184 tol=1.65 2024-07-12 06:40:36,537 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=71.4 pTM=0.467 ipTM=0.186 tol=1.43 2024-07-12 06:40:47,437 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=71.2 pTM=0.465 ipTM=0.182 tol=0.743 2024-07-12 06:40:58,333 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=71.4 pTM=0.466 ipTM=0.183 tol=0.731 2024-07-12 06:41:09,230 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=71.3 pTM=0.465 ipTM=0.184 tol=1.55 2024-07-12 06:41:09,231 alphafold2_multimer_v3_model_2_seed_000 took 338.0s (30 recycles) 2024-07-12 06:41:20,494 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=68.6 pTM=0.466 ipTM=0.182 2024-07-12 06:41:31,392 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=69.6 pTM=0.46 ipTM=0.175 tol=5.67 2024-07-12 06:41:42,294 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=69.4 pTM=0.456 ipTM=0.171 tol=3.79 2024-07-12 06:41:53,210 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=69.2 pTM=0.453 ipTM=0.165 tol=3.87 2024-07-12 06:42:04,130 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=69.4 pTM=0.454 ipTM=0.166 tol=2.19 2024-07-12 06:42:15,043 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=69.4 pTM=0.457 ipTM=0.171 tol=0.868 2024-07-12 06:42:25,961 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=69.6 pTM=0.455 ipTM=0.169 tol=0.923 2024-07-12 06:42:36,859 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=69.6 pTM=0.459 ipTM=0.173 tol=1.61 2024-07-12 06:42:47,796 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=69.3 pTM=0.456 ipTM=0.173 tol=2.07 2024-07-12 06:42:58,734 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=69.5 pTM=0.458 ipTM=0.173 tol=1.85 2024-07-12 06:43:09,623 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=69.2 pTM=0.456 ipTM=0.171 tol=1.64 2024-07-12 06:43:20,565 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=69.3 pTM=0.458 ipTM=0.174 tol=1.22 2024-07-12 06:43:31,500 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=69.1 pTM=0.453 ipTM=0.166 tol=1.75 2024-07-12 06:43:42,421 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=69.1 pTM=0.454 ipTM=0.162 tol=1.04 2024-07-12 06:43:53,351 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=68.9 pTM=0.452 ipTM=0.162 tol=1.39 2024-07-12 06:44:04,269 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=69.2 pTM=0.455 ipTM=0.167 tol=1.23 2024-07-12 06:44:15,184 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=68.9 pTM=0.452 ipTM=0.163 tol=1.47 2024-07-12 06:44:26,099 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=69.1 pTM=0.455 ipTM=0.167 tol=0.881 2024-07-12 06:44:37,018 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=69.1 pTM=0.453 ipTM=0.164 tol=0.491 2024-07-12 06:44:37,019 alphafold2_multimer_v3_model_3_seed_000 took 207.4s (18 recycles) 2024-07-12 06:44:48,310 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=69.2 pTM=0.482 ipTM=0.207 2024-07-12 06:44:59,246 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=70.6 pTM=0.469 ipTM=0.19 tol=5.82 2024-07-12 06:45:10,161 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=70.8 pTM=0.466 ipTM=0.179 tol=2.82 2024-07-12 06:45:21,080 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=70.8 pTM=0.464 ipTM=0.176 tol=2.84 2024-07-12 06:45:32,015 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=71.2 pTM=0.468 ipTM=0.181 tol=2.27 2024-07-12 06:45:42,932 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=70.8 pTM=0.464 ipTM=0.178 tol=1.87 2024-07-12 06:45:53,867 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=71.1 pTM=0.465 ipTM=0.178 tol=1.44 2024-07-12 06:46:04,802 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=70.9 pTM=0.466 ipTM=0.181 tol=1.4 2024-07-12 06:46:15,742 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=71.2 pTM=0.466 ipTM=0.182 tol=1.34 2024-07-12 06:46:26,677 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=70.9 pTM=0.464 ipTM=0.18 tol=1.55 2024-07-12 06:46:37,609 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=70.8 pTM=0.467 ipTM=0.183 tol=1.82 2024-07-12 06:46:48,534 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=70.6 pTM=0.462 ipTM=0.176 tol=1.71 2024-07-12 06:46:59,463 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=70.9 pTM=0.467 ipTM=0.182 tol=1.39 2024-07-12 06:47:10,386 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.6 pTM=0.463 ipTM=0.173 tol=1.34 2024-07-12 06:47:21,293 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=70.6 pTM=0.467 ipTM=0.184 tol=1.37 2024-07-12 06:47:32,212 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.4 pTM=0.462 ipTM=0.175 tol=1.2 2024-07-12 06:47:43,105 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.6 pTM=0.468 ipTM=0.185 tol=1 2024-07-12 06:47:54,005 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=70.3 pTM=0.459 ipTM=0.173 tol=1.48 2024-07-12 06:48:04,903 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=70.6 pTM=0.465 ipTM=0.18 tol=1.48 2024-07-12 06:48:15,800 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70.5 pTM=0.462 ipTM=0.177 tol=0.919 2024-07-12 06:48:26,702 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70.8 pTM=0.469 ipTM=0.185 tol=1.69 2024-07-12 06:48:37,604 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=70.6 pTM=0.463 ipTM=0.176 tol=1.51 2024-07-12 06:48:48,503 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=71 pTM=0.47 ipTM=0.184 tol=2.01 2024-07-12 06:48:59,400 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=70.8 pTM=0.463 ipTM=0.177 tol=1.39 2024-07-12 06:49:10,287 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=71.3 pTM=0.482 ipTM=0.21 tol=2.1 2024-07-12 06:49:21,170 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=71.1 pTM=0.473 ipTM=0.193 tol=0.966 2024-07-12 06:49:32,051 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=71.1 pTM=0.482 ipTM=0.212 tol=0.854 2024-07-12 06:49:42,938 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=70.9 pTM=0.474 ipTM=0.195 tol=1 2024-07-12 06:49:53,827 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=71.5 pTM=0.488 ipTM=0.219 tol=0.845 2024-07-12 06:50:04,711 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=70.8 pTM=0.469 ipTM=0.185 tol=1.18 2024-07-12 06:50:15,587 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=71 pTM=0.48 ipTM=0.209 tol=1.28 2024-07-12 06:50:15,588 alphafold2_multimer_v3_model_4_seed_000 took 338.2s (30 recycles) 2024-07-12 06:50:26,860 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=69 pTM=0.471 ipTM=0.193 2024-07-12 06:50:37,750 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=70.6 pTM=0.47 ipTM=0.184 tol=4.3 2024-07-12 06:50:48,655 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=70.9 pTM=0.462 ipTM=0.165 tol=3.46 2024-07-12 06:50:59,549 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=70.9 pTM=0.467 ipTM=0.171 tol=2.12 2024-07-12 06:51:10,457 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=70.9 pTM=0.462 ipTM=0.163 tol=1.2 2024-07-12 06:51:21,380 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=70.8 pTM=0.465 ipTM=0.167 tol=1.64 2024-07-12 06:51:32,277 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=70.9 pTM=0.462 ipTM=0.163 tol=1.83 2024-07-12 06:51:43,174 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=70.9 pTM=0.465 ipTM=0.164 tol=1.52 2024-07-12 06:51:54,070 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=71 pTM=0.463 ipTM=0.164 tol=1.37 2024-07-12 06:52:04,958 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=70.8 pTM=0.463 ipTM=0.16 tol=2.57 2024-07-12 06:52:15,846 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=70.7 pTM=0.462 ipTM=0.159 tol=2.07 2024-07-12 06:52:26,737 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=70.7 pTM=0.463 ipTM=0.159 tol=1.52 2024-07-12 06:52:37,636 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=70.7 pTM=0.463 ipTM=0.162 tol=1.23 2024-07-12 06:52:48,528 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=70.5 pTM=0.461 ipTM=0.158 tol=2.49 2024-07-12 06:52:59,426 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=70.6 pTM=0.46 ipTM=0.16 tol=2.33 2024-07-12 06:53:10,324 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=70.6 pTM=0.462 ipTM=0.16 tol=1.24 2024-07-12 06:53:21,218 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=70.7 pTM=0.462 ipTM=0.164 tol=1.35 2024-07-12 06:53:32,117 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=70.6 pTM=0.461 ipTM=0.159 tol=1.06 2024-07-12 06:53:43,013 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=70.5 pTM=0.462 ipTM=0.163 tol=1.45 2024-07-12 06:53:53,910 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=70.6 pTM=0.462 ipTM=0.162 tol=1.36 2024-07-12 06:54:04,812 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=70.6 pTM=0.464 ipTM=0.167 tol=1.38 2024-07-12 06:54:15,696 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=70.6 pTM=0.464 ipTM=0.167 tol=2.62 2024-07-12 06:54:26,596 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=70.4 pTM=0.464 ipTM=0.167 tol=2.08 2024-07-12 06:54:37,499 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=70.6 pTM=0.464 ipTM=0.166 tol=1.62 2024-07-12 06:54:48,402 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=70.7 pTM=0.466 ipTM=0.168 tol=1.54 2024-07-12 06:54:59,302 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=70.6 pTM=0.465 ipTM=0.17 tol=1.95 2024-07-12 06:55:10,204 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=70.6 pTM=0.465 ipTM=0.168 tol=1.58 2024-07-12 06:55:21,102 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=70.6 pTM=0.467 ipTM=0.173 tol=1.11 2024-07-12 06:55:31,997 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=70.6 pTM=0.465 ipTM=0.171 tol=3.19 2024-07-12 06:55:42,895 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=70.6 pTM=0.466 ipTM=0.169 tol=2.33 2024-07-12 06:55:53,805 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=70.6 pTM=0.466 ipTM=0.169 tol=1.14 2024-07-12 06:55:53,806 alphafold2_multimer_v3_model_5_seed_000 took 337.8s (30 recycles) 2024-07-12 06:55:54,173 reranking models by 'multimer' metric 2024-07-12 06:56:09,435 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-12 06:56:47,624 Relaxation took 53.5s 2024-07-12 06:56:47,624 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=71 pTM=0.48 ipTM=0.209 2024-07-12 06:57:53,410 Relaxation took 65.8s 2024-07-12 06:57:53,410 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=71.3 pTM=0.465 ipTM=0.184 2024-07-12 06:58:45,870 Relaxation took 52.5s 2024-07-12 06:58:45,870 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=70.6 pTM=0.466 ipTM=0.169 2024-07-12 06:59:50,755 Relaxation took 64.9s 2024-07-12 06:59:50,755 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=69.1 pTM=0.453 ipTM=0.164 2024-07-12 07:00:26,319 Relaxation took 35.6s 2024-07-12 07:00:26,319 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=70.4 pTM=0.45 ipTM=0.153 2024-07-12 07:00:27,664 Done