2024-07-12 06:28:49,547 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-12 06:28:49,886 Running on GPU 2024-07-12 06:29:07,881 Found 6 citations for tools or databases 2024-07-12 06:29:07,882 Query 1/1: PEA15_KATL1 (length 620) 2024-07-12 06:29:08,334 Sleeping for 10s. Reason: PENDING 2024-07-12 06:29:18,764 Sleeping for 5s. Reason: RUNNING 2024-07-12 06:29:24,237 Sleeping for 9s. Reason: RUNNING 2024-07-12 06:29:33,657 Sleeping for 8s. Reason: RUNNING 2024-07-12 06:29:42,076 Sleeping for 6s. Reason: RUNNING 2024-07-12 06:29:48,513 Sleeping for 8s. Reason: RUNNING 2024-07-12 06:29:56,931 Sleeping for 9s. Reason: RUNNING 2024-07-12 06:30:06,362 Sleeping for 6s. Reason: RUNNING 2024-07-12 06:30:12,777 Sleeping for 8s. Reason: RUNNING 2024-07-12 06:30:21,227 Sleeping for 6s. Reason: RUNNING 2024-07-12 06:30:27,640 Sleeping for 10s. Reason: RUNNING 2024-07-12 06:30:38,060 Sleeping for 8s. Reason: RUNNING 2024-07-12 06:30:46,483 Sleeping for 7s. Reason: RUNNING 2024-07-12 06:30:53,892 Sleeping for 6s. Reason: RUNNING 2024-07-12 06:31:00,337 Sleeping for 8s. Reason: RUNNING 2024-07-12 06:31:08,772 Sleeping for 10s. Reason: RUNNING 2024-07-12 06:31:19,212 Sleeping for 5s. Reason: RUNNING 2024-07-12 06:31:24,657 Sleeping for 6s. Reason: RUNNING 2024-07-12 06:31:31,087 Sleeping for 8s. Reason: RUNNING 2024-07-12 06:31:39,513 Sleeping for 5s. Reason: RUNNING 2024-07-12 06:31:44,948 Sleeping for 7s. Reason: RUNNING 2024-07-12 06:31:54,826 Sleeping for 6s. Reason: PENDING 2024-07-12 06:32:01,259 Sleeping for 6s. Reason: RUNNING 2024-07-12 06:32:07,701 Sleeping for 9s. Reason: RUNNING 2024-07-12 06:32:17,131 Sleeping for 8s. Reason: RUNNING 2024-07-12 06:32:25,537 Sleeping for 7s. Reason: RUNNING 2024-07-12 06:32:32,963 Sleeping for 7s. Reason: RUNNING 2024-07-12 06:32:40,380 Sleeping for 10s. Reason: RUNNING 2024-07-12 06:32:50,806 Sleeping for 10s. Reason: RUNNING 2024-07-12 06:33:01,238 Sleeping for 9s. Reason: RUNNING 2024-07-12 06:33:10,633 Sleeping for 9s. Reason: RUNNING 2024-07-12 06:33:20,063 Sleeping for 9s. Reason: RUNNING 2024-07-12 06:33:29,519 Sleeping for 7s. Reason: RUNNING 2024-07-12 06:33:40,008 Setting max_seq=508, max_extra_seq=2048 2024-07-12 06:36:56,079 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=63.2 pTM=0.47 ipTM=0.208 2024-07-12 06:37:03,987 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=63.1 pTM=0.476 ipTM=0.15 tol=7.84 2024-07-12 06:37:11,905 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=64.1 pTM=0.483 ipTM=0.142 tol=4.45 2024-07-12 06:37:19,826 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=63.2 pTM=0.479 ipTM=0.135 tol=3.75 2024-07-12 06:37:27,763 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=64.4 pTM=0.486 ipTM=0.138 tol=3.74 2024-07-12 06:37:35,693 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=64 pTM=0.481 ipTM=0.133 tol=1.86 2024-07-12 06:37:43,643 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=64.2 pTM=0.481 ipTM=0.135 tol=1.95 2024-07-12 06:37:51,598 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64.1 pTM=0.477 ipTM=0.131 tol=2.05 2024-07-12 06:37:59,580 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64.2 pTM=0.48 ipTM=0.133 tol=1.32 2024-07-12 06:38:07,548 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.1 pTM=0.479 ipTM=0.137 tol=1.37 2024-07-12 06:38:15,513 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64.4 pTM=0.481 ipTM=0.135 tol=1.43 2024-07-12 06:38:23,484 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=64.2 pTM=0.479 ipTM=0.134 tol=1.2 2024-07-12 06:38:31,457 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.4 pTM=0.483 ipTM=0.135 tol=1.34 2024-07-12 06:38:39,428 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64.3 pTM=0.486 ipTM=0.139 tol=1.54 2024-07-12 06:38:47,392 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=64.7 pTM=0.484 ipTM=0.136 tol=1.17 2024-07-12 06:38:55,357 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=64.2 pTM=0.482 ipTM=0.138 tol=1.5 2024-07-12 06:39:03,325 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.5 pTM=0.483 ipTM=0.141 tol=1.07 2024-07-12 06:39:11,293 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.4 pTM=0.486 ipTM=0.138 tol=1.76 2024-07-12 06:39:19,275 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.2 pTM=0.483 ipTM=0.141 tol=3.31 2024-07-12 06:39:27,232 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=64.1 pTM=0.486 ipTM=0.14 tol=2.62 2024-07-12 06:39:35,207 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=64.2 pTM=0.488 ipTM=0.145 tol=1.56 2024-07-12 06:39:43,186 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64.5 pTM=0.486 ipTM=0.144 tol=3.28 2024-07-12 06:39:51,176 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.4 pTM=0.485 ipTM=0.14 tol=2.62 2024-07-12 06:39:59,162 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=64.1 pTM=0.481 ipTM=0.138 tol=1.99 2024-07-12 06:40:07,144 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=64.4 pTM=0.485 ipTM=0.137 tol=0.737 2024-07-12 06:40:15,123 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.4 pTM=0.484 ipTM=0.142 tol=0.962 2024-07-12 06:40:23,109 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=64.5 pTM=0.484 ipTM=0.139 tol=0.842 2024-07-12 06:40:31,092 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=64.1 pTM=0.481 ipTM=0.133 tol=1.64 2024-07-12 06:40:39,078 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=64.4 pTM=0.483 ipTM=0.136 tol=2.7 2024-07-12 06:40:47,055 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=64.4 pTM=0.483 ipTM=0.142 tol=2.62 2024-07-12 06:40:55,031 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=64.4 pTM=0.487 ipTM=0.149 tol=1.68 2024-07-12 06:40:55,031 alphafold2_multimer_v3_model_1_seed_000 took 375.9s (30 recycles) 2024-07-12 06:41:03,297 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=64.8 pTM=0.482 ipTM=0.228 2024-07-12 06:41:11,300 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=64.4 pTM=0.488 ipTM=0.176 tol=10.4 2024-07-12 06:41:19,306 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=65.2 pTM=0.494 ipTM=0.175 tol=9.84 2024-07-12 06:41:27,316 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=65.3 pTM=0.495 ipTM=0.164 tol=3.38 2024-07-12 06:41:35,326 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=65.2 pTM=0.494 ipTM=0.161 tol=4.98 2024-07-12 06:41:43,334 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=64.9 pTM=0.49 ipTM=0.16 tol=5.23 2024-07-12 06:41:51,345 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=64.8 pTM=0.49 ipTM=0.153 tol=6.67 2024-07-12 06:41:59,354 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=65.4 pTM=0.492 ipTM=0.155 tol=2.16 2024-07-12 06:42:07,363 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=64.9 pTM=0.49 ipTM=0.157 tol=2.6 2024-07-12 06:42:15,364 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=64.9 pTM=0.49 ipTM=0.157 tol=1.52 2024-07-12 06:42:23,379 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=64.8 pTM=0.489 ipTM=0.153 tol=1.07 2024-07-12 06:42:31,398 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=64.6 pTM=0.487 ipTM=0.156 tol=2.63 2024-07-12 06:42:39,413 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=64.7 pTM=0.489 ipTM=0.156 tol=1.68 2024-07-12 06:42:47,428 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=64.6 pTM=0.487 ipTM=0.153 tol=4.39 2024-07-12 06:42:55,436 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=64.9 pTM=0.49 ipTM=0.157 tol=5.85 2024-07-12 06:43:03,443 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=64.9 pTM=0.49 ipTM=0.156 tol=1.96 2024-07-12 06:43:11,463 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=65.1 pTM=0.488 ipTM=0.158 tol=1.56 2024-07-12 06:43:19,478 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=65.2 pTM=0.492 ipTM=0.152 tol=4.46 2024-07-12 06:43:27,493 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64.7 pTM=0.491 ipTM=0.151 tol=2.25 2024-07-12 06:43:35,507 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=65.2 pTM=0.496 ipTM=0.153 tol=1.52 2024-07-12 06:43:43,520 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=65.2 pTM=0.495 ipTM=0.15 tol=2.09 2024-07-12 06:43:51,532 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=65.2 pTM=0.494 ipTM=0.153 tol=2.93 2024-07-12 06:43:59,537 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=65.1 pTM=0.49 ipTM=0.154 tol=2.02 2024-07-12 06:44:07,549 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=65.1 pTM=0.491 ipTM=0.156 tol=1.48 2024-07-12 06:44:15,552 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=65.1 pTM=0.492 ipTM=0.161 tol=1.58 2024-07-12 06:44:23,563 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=65.4 pTM=0.491 ipTM=0.155 tol=1.32 2024-07-12 06:44:31,579 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=64.8 pTM=0.49 ipTM=0.148 tol=2.26 2024-07-12 06:44:39,592 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=64.8 pTM=0.488 ipTM=0.142 tol=2.38 2024-07-12 06:44:47,604 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=64.9 pTM=0.49 ipTM=0.146 tol=1.45 2024-07-12 06:44:55,614 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=64.9 pTM=0.49 ipTM=0.151 tol=1.25 2024-07-12 06:45:03,633 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=65 pTM=0.492 ipTM=0.148 tol=2.93 2024-07-12 06:45:03,634 alphafold2_multimer_v3_model_2_seed_000 took 248.3s (30 recycles) 2024-07-12 06:45:11,943 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=64.4 pTM=0.468 ipTM=0.204 2024-07-12 06:45:19,987 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=64.8 pTM=0.47 ipTM=0.167 tol=5.3 2024-07-12 06:45:28,026 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=63.3 pTM=0.473 ipTM=0.174 tol=5.07 2024-07-12 06:45:36,071 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=64.2 pTM=0.472 ipTM=0.143 tol=6.43 2024-07-12 06:45:44,105 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=64.4 pTM=0.475 ipTM=0.16 tol=2.06 2024-07-12 06:45:52,135 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=64.4 pTM=0.473 ipTM=0.153 tol=2.16 2024-07-12 06:46:00,158 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=64.6 pTM=0.475 ipTM=0.182 tol=1.26 2024-07-12 06:46:08,180 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=64.2 pTM=0.475 ipTM=0.139 tol=2.57 2024-07-12 06:46:16,199 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=64.4 pTM=0.474 ipTM=0.173 tol=1.66 2024-07-12 06:46:24,213 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=64.3 pTM=0.475 ipTM=0.144 tol=1.36 2024-07-12 06:46:32,241 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=64.3 pTM=0.475 ipTM=0.171 tol=3.1 2024-07-12 06:46:40,252 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=64.4 pTM=0.471 ipTM=0.155 tol=3.3 2024-07-12 06:46:48,260 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=63.8 pTM=0.47 ipTM=0.177 tol=2 2024-07-12 06:46:56,269 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=64.2 pTM=0.471 ipTM=0.141 tol=1.58 2024-07-12 06:47:04,287 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=64.1 pTM=0.473 ipTM=0.156 tol=1.07 2024-07-12 06:47:12,301 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=64.6 pTM=0.475 ipTM=0.141 tol=1.31 2024-07-12 06:47:20,315 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=64.1 pTM=0.472 ipTM=0.158 tol=1.14 2024-07-12 06:47:28,322 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=64.7 pTM=0.479 ipTM=0.14 tol=1.63 2024-07-12 06:47:36,332 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=64.2 pTM=0.475 ipTM=0.151 tol=1.28 2024-07-12 06:47:44,342 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=64 pTM=0.477 ipTM=0.133 tol=1.98 2024-07-12 06:47:52,354 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=64.2 pTM=0.478 ipTM=0.134 tol=1.34 2024-07-12 06:48:00,368 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=64.5 pTM=0.479 ipTM=0.132 tol=1.54 2024-07-12 06:48:08,383 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=64.7 pTM=0.476 ipTM=0.145 tol=2.23 2024-07-12 06:48:16,401 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=64.2 pTM=0.477 ipTM=0.13 tol=2.47 2024-07-12 06:48:24,414 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=64.4 pTM=0.479 ipTM=0.138 tol=3.85 2024-07-12 06:48:32,428 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=64.4 pTM=0.477 ipTM=0.127 tol=1.56 2024-07-12 06:48:40,447 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=64.4 pTM=0.476 ipTM=0.133 tol=1.04 2024-07-12 06:48:48,472 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=64.2 pTM=0.475 ipTM=0.126 tol=1.42 2024-07-12 06:48:56,499 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=64.5 pTM=0.475 ipTM=0.138 tol=2.46 2024-07-12 06:49:04,522 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=64.1 pTM=0.475 ipTM=0.131 tol=5.18 2024-07-12 06:49:12,548 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=64.2 pTM=0.478 ipTM=0.132 tol=4.62 2024-07-12 06:49:12,548 alphafold2_multimer_v3_model_3_seed_000 took 248.7s (30 recycles) 2024-07-12 06:49:20,797 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=66 pTM=0.519 ipTM=0.266 2024-07-12 06:49:28,805 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=65 pTM=0.494 ipTM=0.217 tol=8.26 2024-07-12 06:49:36,827 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.3 pTM=0.509 ipTM=0.204 tol=8.58 2024-07-12 06:49:44,839 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=65.4 pTM=0.5 ipTM=0.211 tol=6.5 2024-07-12 06:49:52,852 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=65.2 pTM=0.504 ipTM=0.206 tol=4.38 2024-07-12 06:50:00,859 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=65.6 pTM=0.503 ipTM=0.208 tol=3.7 2024-07-12 06:50:08,863 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=65.2 pTM=0.502 ipTM=0.201 tol=3.46 2024-07-12 06:50:16,871 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=65.8 pTM=0.504 ipTM=0.207 tol=5.69 2024-07-12 06:50:24,879 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=65.6 pTM=0.507 ipTM=0.202 tol=4.91 2024-07-12 06:50:32,889 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=65.8 pTM=0.507 ipTM=0.201 tol=4.31 2024-07-12 06:50:40,895 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=65.1 pTM=0.503 ipTM=0.193 tol=3.39 2024-07-12 06:50:48,911 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=65.2 pTM=0.502 ipTM=0.199 tol=3.88 2024-07-12 06:50:56,924 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=65.4 pTM=0.503 ipTM=0.186 tol=3.76 2024-07-12 06:51:04,942 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=66 pTM=0.505 ipTM=0.199 tol=2.92 2024-07-12 06:51:12,961 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=65.9 pTM=0.503 ipTM=0.208 tol=3.17 2024-07-12 06:51:20,981 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64.9 pTM=0.5 ipTM=0.19 tol=3.46 2024-07-12 06:51:29,008 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=65.6 pTM=0.507 ipTM=0.183 tol=3.04 2024-07-12 06:51:37,036 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=66.4 pTM=0.511 ipTM=0.202 tol=5.61 2024-07-12 06:51:45,065 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=65.8 pTM=0.506 ipTM=0.202 tol=3.12 2024-07-12 06:51:53,090 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=65.8 pTM=0.507 ipTM=0.18 tol=5.66 2024-07-12 06:52:01,125 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=65.4 pTM=0.505 ipTM=0.176 tol=1.36 2024-07-12 06:52:09,160 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=65.8 pTM=0.509 ipTM=0.182 tol=2.45 2024-07-12 06:52:17,190 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=65.8 pTM=0.506 ipTM=0.18 tol=2.71 2024-07-12 06:52:25,206 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=65.9 pTM=0.505 ipTM=0.195 tol=3.28 2024-07-12 06:52:33,225 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=66.1 pTM=0.509 ipTM=0.197 tol=3.12 2024-07-12 06:52:41,243 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=65.5 pTM=0.504 ipTM=0.184 tol=3.11 2024-07-12 06:52:49,272 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=65.1 pTM=0.502 ipTM=0.172 tol=1.55 2024-07-12 06:52:57,291 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=65.1 pTM=0.506 ipTM=0.179 tol=2.46 2024-07-12 06:53:05,310 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=65 pTM=0.501 ipTM=0.169 tol=1.3 2024-07-12 06:53:13,330 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=65.6 pTM=0.504 ipTM=0.199 tol=2.19 2024-07-12 06:53:21,359 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=65.7 pTM=0.504 ipTM=0.193 tol=3.33 2024-07-12 06:53:21,359 alphafold2_multimer_v3_model_4_seed_000 took 248.6s (30 recycles) 2024-07-12 06:53:31,547 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=64.6 pTM=0.486 ipTM=0.167 2024-07-12 06:53:39,584 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=64.1 pTM=0.488 ipTM=0.163 tol=10.9 2024-07-12 06:53:47,608 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=64.6 pTM=0.494 ipTM=0.169 tol=5.91 2024-07-12 06:53:55,633 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=64.8 pTM=0.494 ipTM=0.158 tol=2.63 2024-07-12 06:54:03,657 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=64.6 pTM=0.494 ipTM=0.155 tol=3.82 2024-07-12 06:54:11,680 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=64.9 pTM=0.495 ipTM=0.162 tol=1.88 2024-07-12 06:54:19,690 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=64.1 pTM=0.489 ipTM=0.162 tol=3.76 2024-07-12 06:54:27,700 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=64.8 pTM=0.493 ipTM=0.16 tol=2.56 2024-07-12 06:54:35,710 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=64.2 pTM=0.49 ipTM=0.163 tol=2.25 2024-07-12 06:54:43,712 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=65.1 pTM=0.496 ipTM=0.161 tol=1.71 2024-07-12 06:54:51,715 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=64.1 pTM=0.49 ipTM=0.166 tol=2.98 2024-07-12 06:54:59,719 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=64.3 pTM=0.491 ipTM=0.157 tol=1.98 2024-07-12 06:55:07,735 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=64.6 pTM=0.496 ipTM=0.153 tol=2.16 2024-07-12 06:55:15,743 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=64.9 pTM=0.495 ipTM=0.158 tol=1.09 2024-07-12 06:55:23,750 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=64.6 pTM=0.493 ipTM=0.174 tol=2.01 2024-07-12 06:55:31,763 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=64.3 pTM=0.49 ipTM=0.164 tol=0.914 2024-07-12 06:55:39,776 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=64.6 pTM=0.493 ipTM=0.158 tol=1.12 2024-07-12 06:55:47,794 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=65.4 pTM=0.5 ipTM=0.156 tol=1.53 2024-07-12 06:55:55,810 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=64.4 pTM=0.491 ipTM=0.162 tol=2.04 2024-07-12 06:56:03,824 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=64.8 pTM=0.495 ipTM=0.158 tol=1.14 2024-07-12 06:56:11,835 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=64.4 pTM=0.491 ipTM=0.162 tol=1.5 2024-07-12 06:56:19,847 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=64.8 pTM=0.495 ipTM=0.153 tol=1.15 2024-07-12 06:56:27,851 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=64.2 pTM=0.489 ipTM=0.157 tol=1.47 2024-07-12 06:56:35,857 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=64.6 pTM=0.493 ipTM=0.164 tol=1.13 2024-07-12 06:56:43,862 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=64.6 pTM=0.494 ipTM=0.177 tol=1.58 2024-07-12 06:56:51,871 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=64.7 pTM=0.493 ipTM=0.161 tol=0.797 2024-07-12 06:56:59,879 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=64.3 pTM=0.492 ipTM=0.149 tol=2.26 2024-07-12 06:57:07,888 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=64.6 pTM=0.492 ipTM=0.15 tol=1.9 2024-07-12 06:57:15,892 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=63.8 pTM=0.489 ipTM=0.152 tol=1.91 2024-07-12 06:57:23,894 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=64.6 pTM=0.492 ipTM=0.161 tol=1.48 2024-07-12 06:57:31,899 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=64.6 pTM=0.492 ipTM=0.169 tol=1.74 2024-07-12 06:57:31,900 alphafold2_multimer_v3_model_5_seed_000 took 248.4s (30 recycles) 2024-07-12 06:57:32,153 reranking models by 'multimer' metric 2024-07-12 06:57:35,745 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-12 06:58:21,214 Relaxation took 49.1s 2024-07-12 06:58:21,214 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=65.7 pTM=0.504 ipTM=0.193 2024-07-12 06:58:45,490 Relaxation took 24.3s 2024-07-12 06:58:45,490 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=64.6 pTM=0.492 ipTM=0.169 2024-07-12 06:59:04,805 Relaxation took 19.3s 2024-07-12 06:59:04,805 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=65 pTM=0.492 ipTM=0.148 2024-07-12 06:59:34,520 Relaxation took 29.7s 2024-07-12 06:59:34,520 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=64.4 pTM=0.487 ipTM=0.149 2024-07-12 07:00:18,650 Relaxation took 44.1s 2024-07-12 07:00:18,651 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=64.2 pTM=0.478 ipTM=0.132 2024-07-12 07:00:21,106 Done