2024-07-12 07:01:34,606 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 07:01:34,920 Running on GPU
2024-07-12 07:01:39,642 Found 6 citations for tools or databases
2024-07-12 07:01:39,643 Query 1/1: PGBD5_ZMIZ2 (length 1444)
2024-07-12 07:01:42,493 Sleeping for 10s. Reason: PENDING
2024-07-12 07:01:52,942 Sleeping for 7s. Reason: RUNNING
2024-07-12 07:02:00,382 Sleeping for 8s. Reason: RUNNING
2024-07-12 07:02:08,823 Sleeping for 7s. Reason: RUNNING
2024-07-12 07:02:16,243 Sleeping for 10s. Reason: RUNNING
2024-07-12 07:02:26,662 Sleeping for 5s. Reason: RUNNING
2024-07-12 07:02:32,084 Sleeping for 7s. Reason: RUNNING
2024-07-12 07:02:39,512 Sleeping for 7s. Reason: RUNNING
2024-07-12 07:02:48,441 Sleeping for 9s. Reason: PENDING
2024-07-12 07:02:57,874 Sleeping for 10s. Reason: RUNNING
2024-07-12 07:03:08,293 Sleeping for 6s. Reason: RUNNING
2024-07-12 07:03:14,717 Sleeping for 8s. Reason: RUNNING
2024-07-12 07:03:23,145 Sleeping for 5s. Reason: RUNNING
2024-07-12 07:03:28,565 Sleeping for 7s. Reason: RUNNING
2024-07-12 07:03:38,614 Setting max_seq=508, max_extra_seq=2048
2024-07-12 07:07:29,746 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=47.5 pTM=0.419 ipTM=0.25
2024-07-12 07:08:29,098 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=49.8 pTM=0.417 ipTM=0.229 tol=21.7
2024-07-12 07:09:28,522 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=48.9 pTM=0.422 ipTM=0.352 tol=16
2024-07-12 07:10:27,986 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=48.8 pTM=0.427 ipTM=0.506 tol=8.27
2024-07-12 07:11:27,470 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=48.8 pTM=0.427 ipTM=0.546 tol=4
2024-07-12 07:12:26,963 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=48.9 pTM=0.432 ipTM=0.56 tol=4.68
2024-07-12 07:13:26,510 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=49 pTM=0.427 ipTM=0.562 tol=6.07
2024-07-12 07:14:26,030 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=48.9 pTM=0.427 ipTM=0.573 tol=3.11
2024-07-12 07:15:25,552 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=48.8 pTM=0.425 ipTM=0.559 tol=2.05
2024-07-12 07:16:25,011 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=49 pTM=0.427 ipTM=0.574 tol=5.25
2024-07-12 07:17:24,469 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=48.8 pTM=0.425 ipTM=0.564 tol=5.55
2024-07-12 07:18:23,917 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=48.8 pTM=0.426 ipTM=0.566 tol=5.7
2024-07-12 07:19:23,381 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=48.7 pTM=0.427 ipTM=0.58 tol=2.26
2024-07-12 07:20:22,851 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=48.8 pTM=0.428 ipTM=0.583 tol=2.4
2024-07-12 07:21:22,339 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=48.9 pTM=0.427 ipTM=0.581 tol=2.3
2024-07-12 07:22:21,849 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=49 pTM=0.43 ipTM=0.577 tol=4.15
2024-07-12 07:23:21,368 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=48.8 pTM=0.425 ipTM=0.565 tol=2.45
2024-07-12 07:24:20,871 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=48.9 pTM=0.428 ipTM=0.562 tol=5.89
2024-07-12 07:25:20,370 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=48.7 pTM=0.424 ipTM=0.564 tol=6.52
2024-07-12 07:26:19,858 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=48.8 pTM=0.428 ipTM=0.561 tol=2.88
2024-07-12 07:27:19,368 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=49 pTM=0.425 ipTM=0.568 tol=4.98
2024-07-12 07:28:18,865 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=49 pTM=0.427 ipTM=0.569 tol=5.13
2024-07-12 07:29:18,373 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=48.8 pTM=0.425 ipTM=0.556 tol=5.01
2024-07-12 07:30:17,850 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=48.9 pTM=0.428 ipTM=0.573 tol=4.1
2024-07-12 07:31:17,338 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=49 pTM=0.427 ipTM=0.57 tol=2.94
2024-07-12 07:32:16,844 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=49.1 pTM=0.428 ipTM=0.58 tol=2.77
2024-07-12 07:33:16,388 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=49.1 pTM=0.427 ipTM=0.577 tol=5
2024-07-12 07:34:15,906 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=48.9 pTM=0.43 ipTM=0.569 tol=4.76
2024-07-12 07:35:15,420 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=49.1 pTM=0.428 ipTM=0.576 tol=4.66
2024-07-12 07:36:14,949 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=49 pTM=0.428 ipTM=0.58 tol=4.12
2024-07-12 07:37:14,496 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=49 pTM=0.425 ipTM=0.582 tol=2.76
2024-07-12 07:37:14,497 alphafold2_multimer_v3_model_1_seed_000 took 1972.6s (30 recycles)
2024-07-12 07:38:15,240 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=48.6 pTM=0.428 ipTM=0.281
2024-07-12 07:39:14,891 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=50 pTM=0.413 ipTM=0.317 tol=18.2
2024-07-12 07:40:14,559 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=49.9 pTM=0.414 ipTM=0.268 tol=16.8
2024-07-12 07:41:14,252 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=50.2 pTM=0.408 ipTM=0.258 tol=9.59
2024-07-12 07:42:13,958 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=50 pTM=0.409 ipTM=0.254 tol=5.26
2024-07-12 07:43:13,635 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=50 pTM=0.407 ipTM=0.232 tol=5.86
2024-07-12 07:44:13,327 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=50 pTM=0.407 ipTM=0.229 tol=4.12
2024-07-12 07:45:13,027 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=50.2 pTM=0.407 ipTM=0.225 tol=3.55
2024-07-12 07:46:12,716 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=50.1 pTM=0.407 ipTM=0.23 tol=3.99
2024-07-12 07:47:12,367 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=50.2 pTM=0.406 ipTM=0.236 tol=4.46
2024-07-12 07:48:12,004 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=50 pTM=0.408 ipTM=0.239 tol=3.75
2024-07-12 07:49:11,647 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=50.1 pTM=0.406 ipTM=0.224 tol=4.15
2024-07-12 07:50:11,284 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=50 pTM=0.406 ipTM=0.225 tol=3.67
2024-07-12 07:51:10,940 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=50.2 pTM=0.407 ipTM=0.234 tol=3.11
2024-07-12 07:52:10,623 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=50.1 pTM=0.407 ipTM=0.232 tol=3.08
2024-07-12 07:53:10,341 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=50.2 pTM=0.408 ipTM=0.236 tol=2.94
2024-07-12 07:54:10,047 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=50 pTM=0.406 ipTM=0.22 tol=2.54
2024-07-12 07:55:09,768 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=50.2 pTM=0.407 ipTM=0.242 tol=3.19
2024-07-12 07:56:09,490 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=49.9 pTM=0.406 ipTM=0.231 tol=7.55
2024-07-12 07:57:09,191 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=50 pTM=0.407 ipTM=0.233 tol=3.28
2024-07-12 07:58:08,897 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=49.9 pTM=0.406 ipTM=0.235 tol=6.43
2024-07-12 07:59:08,619 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=50 pTM=0.406 ipTM=0.228 tol=4.4
2024-07-12 08:00:08,324 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=49.8 pTM=0.406 ipTM=0.239 tol=4.25
2024-07-12 08:01:08,006 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=49.8 pTM=0.406 ipTM=0.226 tol=2.57
2024-07-12 08:02:07,684 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=50 pTM=0.406 ipTM=0.232 tol=4.88
2024-07-12 08:03:07,378 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=50.1 pTM=0.406 ipTM=0.23 tol=4.01
2024-07-12 08:04:07,060 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=49.9 pTM=0.408 ipTM=0.229 tol=5.89
2024-07-12 08:05:06,756 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=49.9 pTM=0.406 ipTM=0.223 tol=2.63
2024-07-12 08:06:06,472 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=50 pTM=0.407 ipTM=0.231 tol=8.03
2024-07-12 08:07:06,178 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=50.1 pTM=0.406 ipTM=0.223 tol=3.9
2024-07-12 08:08:05,882 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=50 pTM=0.406 ipTM=0.226 tol=3.45
2024-07-12 08:08:05,883 alphafold2_multimer_v3_model_2_seed_000 took 1850.2s (30 recycles)
2024-07-12 08:09:07,001 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=47.7 pTM=0.409 ipTM=0.224
2024-07-12 08:10:06,907 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=48.2 pTM=0.411 ipTM=0.291 tol=20.3
2024-07-12 08:11:06,783 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=48.8 pTM=0.418 ipTM=0.378 tol=12.8
2024-07-12 08:12:06,662 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=48.5 pTM=0.413 ipTM=0.418 tol=9.66
2024-07-12 08:13:06,537 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=48.7 pTM=0.416 ipTM=0.431 tol=5.43
2024-07-12 08:14:06,440 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=48.8 pTM=0.414 ipTM=0.447 tol=4.7
2024-07-12 08:15:06,316 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=48.8 pTM=0.413 ipTM=0.442 tol=4.56
2024-07-12 08:16:06,122 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=48.7 pTM=0.412 ipTM=0.437 tol=2.53
2024-07-12 08:17:05,910 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=48.6 pTM=0.411 ipTM=0.427 tol=2.23
2024-07-12 08:18:05,669 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=48.7 pTM=0.411 ipTM=0.43 tol=2.12
2024-07-12 08:19:05,441 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=48.6 pTM=0.412 ipTM=0.421 tol=2.32
2024-07-12 08:20:05,173 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=48.6 pTM=0.412 ipTM=0.421 tol=2.08
2024-07-12 08:21:04,941 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=48.5 pTM=0.409 ipTM=0.453 tol=2.41
2024-07-12 08:22:04,759 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=48.6 pTM=0.411 ipTM=0.446 tol=2.08
2024-07-12 08:23:04,567 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=48.7 pTM=0.411 ipTM=0.446 tol=1.94
2024-07-12 08:24:04,399 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=48.5 pTM=0.408 ipTM=0.438 tol=1.98
2024-07-12 08:25:04,221 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=48.7 pTM=0.411 ipTM=0.433 tol=2.95
2024-07-12 08:26:04,031 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=48.7 pTM=0.408 ipTM=0.428 tol=2.77
2024-07-12 08:27:03,835 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=48.9 pTM=0.413 ipTM=0.435 tol=3.02
2024-07-12 08:28:03,659 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=49 pTM=0.413 ipTM=0.437 tol=2.42
2024-07-12 08:29:03,518 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=49.1 pTM=0.415 ipTM=0.444 tol=2.32
2024-07-12 08:30:03,355 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=49 pTM=0.414 ipTM=0.435 tol=1.56
2024-07-12 08:31:03,196 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=49 pTM=0.415 ipTM=0.43 tol=2.25
2024-07-12 08:32:03,070 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=49.1 pTM=0.416 ipTM=0.446 tol=2.82
2024-07-12 08:33:02,917 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=49.1 pTM=0.416 ipTM=0.433 tol=2.7
2024-07-12 08:34:02,749 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=49.3 pTM=0.415 ipTM=0.445 tol=3.71
2024-07-12 08:35:02,582 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=49.1 pTM=0.416 ipTM=0.456 tol=4.03
2024-07-12 08:36:02,397 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=49.2 pTM=0.416 ipTM=0.462 tol=4.23
2024-07-12 08:37:02,215 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=49.3 pTM=0.417 ipTM=0.464 tol=2.88
2024-07-12 08:38:02,015 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=49.3 pTM=0.417 ipTM=0.46 tol=3.33
2024-07-12 08:39:01,848 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=49.3 pTM=0.415 ipTM=0.466 tol=3.61
2024-07-12 08:39:01,849 alphafold2_multimer_v3_model_3_seed_000 took 1854.7s (30 recycles)
2024-07-12 08:40:02,779 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=46.2 pTM=0.442 ipTM=0.333
2024-07-12 08:41:02,566 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=47.2 pTM=0.421 ipTM=0.343 tol=20.1
2024-07-12 08:42:02,227 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=46.3 pTM=0.48 ipTM=0.608 tol=26.4
2024-07-12 08:43:02,051 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=47.1 pTM=0.42 ipTM=0.273 tol=19.9
2024-07-12 08:44:01,843 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=47.4 pTM=0.422 ipTM=0.369 tol=13.7
2024-07-12 08:45:01,629 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=47.3 pTM=0.426 ipTM=0.407 tol=12.5
2024-07-12 08:46:01,413 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=47.4 pTM=0.422 ipTM=0.418 tol=11.9
2024-07-12 08:47:01,108 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=47.6 pTM=0.452 ipTM=0.407 tol=16.5
2024-07-12 08:48:00,851 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=47.5 pTM=0.423 ipTM=0.413 tol=15.1
2024-07-12 08:49:00,595 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=47.2 pTM=0.424 ipTM=0.423 tol=13.2
2024-07-12 08:50:00,321 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=47.4 pTM=0.426 ipTM=0.429 tol=6.91
2024-07-12 08:51:00,038 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=47.2 pTM=0.428 ipTM=0.429 tol=7.72
2024-07-12 08:51:59,750 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=47.2 pTM=0.423 ipTM=0.431 tol=11.5
2024-07-12 08:52:59,436 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=47.1 pTM=0.435 ipTM=0.434 tol=10.2
2024-07-12 08:53:59,128 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=47.9 pTM=0.429 ipTM=0.436 tol=12.7
2024-07-12 08:54:58,795 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=47.5 pTM=0.432 ipTM=0.433 tol=8.99
2024-07-12 08:55:58,495 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=47.8 pTM=0.427 ipTM=0.427 tol=10.1
2024-07-12 08:56:58,206 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=47.6 pTM=0.433 ipTM=0.421 tol=10.6
2024-07-12 08:57:57,891 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=47.9 pTM=0.427 ipTM=0.427 tol=9.17
2024-07-12 08:58:57,555 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=47.2 pTM=0.433 ipTM=0.413 tol=9.48
2024-07-12 08:59:57,234 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=48.1 pTM=0.427 ipTM=0.424 tol=9.95
2024-07-12 09:00:56,903 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=47.5 pTM=0.434 ipTM=0.416 tol=8.23
2024-07-12 09:01:56,605 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=47.7 pTM=0.424 ipTM=0.417 tol=8.72
2024-07-12 09:02:56,282 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=47.5 pTM=0.434 ipTM=0.42 tol=8.55
2024-07-12 09:03:55,979 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=47.8 pTM=0.427 ipTM=0.422 tol=8.69
2024-07-12 09:04:55,673 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=47.7 pTM=0.433 ipTM=0.426 tol=7.12
2024-07-12 09:05:55,397 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=47.8 pTM=0.427 ipTM=0.437 tol=6.36
2024-07-12 09:06:55,076 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=47.7 pTM=0.437 ipTM=0.444 tol=8.27
2024-07-12 09:07:54,807 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=48.4 pTM=0.431 ipTM=0.447 tol=8.38
2024-07-12 09:08:54,506 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=48.2 pTM=0.435 ipTM=0.446 tol=6.09
2024-07-12 09:09:54,247 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=47.9 pTM=0.427 ipTM=0.456 tol=5.16
2024-07-12 09:09:54,249 alphafold2_multimer_v3_model_4_seed_000 took 1851.1s (30 recycles)
2024-07-12 09:10:55,170 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=46 pTM=0.473 ipTM=0.512
2024-07-12 09:11:54,942 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=49.3 pTM=0.416 ipTM=0.222 tol=22.1
2024-07-12 09:12:54,746 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=49.3 pTM=0.416 ipTM=0.344 tol=17
2024-07-12 09:13:54,563 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=49.8 pTM=0.418 ipTM=0.427 tol=11.5
2024-07-12 09:14:54,368 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=49.8 pTM=0.417 ipTM=0.416 tol=9.36
2024-07-12 09:15:54,142 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=50.1 pTM=0.415 ipTM=0.444 tol=9.75
2024-07-12 09:16:53,982 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=49.9 pTM=0.413 ipTM=0.432 tol=4.7
2024-07-12 09:17:53,806 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=49.8 pTM=0.415 ipTM=0.428 tol=7.25
2024-07-12 09:18:53,647 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=49.8 pTM=0.414 ipTM=0.412 tol=11.5
2024-07-12 09:19:53,502 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=49.8 pTM=0.416 ipTM=0.424 tol=10.6
2024-07-12 09:20:53,369 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=49.8 pTM=0.416 ipTM=0.417 tol=7.21
2024-07-12 09:21:53,228 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=49.8 pTM=0.414 ipTM=0.43 tol=10
2024-07-12 09:22:53,069 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=49.6 pTM=0.415 ipTM=0.44 tol=9.66
2024-07-12 09:23:52,889 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=49.8 pTM=0.417 ipTM=0.448 tol=9.59
2024-07-12 09:24:52,718 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=48.9 pTM=0.417 ipTM=0.446 tol=22.8
2024-07-12 09:25:52,538 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=49.8 pTM=0.416 ipTM=0.442 tol=15
2024-07-12 09:26:52,376 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=49.8 pTM=0.416 ipTM=0.433 tol=14.9
2024-07-12 09:27:52,175 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=50 pTM=0.417 ipTM=0.444 tol=14.6
2024-07-12 09:28:51,913 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=49.6 pTM=0.417 ipTM=0.441 tol=9.76
2024-07-12 09:29:51,665 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=49.8 pTM=0.419 ipTM=0.443 tol=7.78
2024-07-12 09:30:51,436 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=49.8 pTM=0.417 ipTM=0.44 tol=11.5
2024-07-12 09:31:51,226 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=49.9 pTM=0.416 ipTM=0.433 tol=11
2024-07-12 09:32:51,006 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=49.7 pTM=0.414 ipTM=0.426 tol=6.99
2024-07-12 09:33:50,769 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=49.8 pTM=0.416 ipTM=0.439 tol=4.07
2024-07-12 09:34:50,558 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=49.7 pTM=0.417 ipTM=0.443 tol=9.16
2024-07-12 09:35:50,387 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=49.9 pTM=0.416 ipTM=0.447 tol=6.47
2024-07-12 09:36:50,204 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=49.8 pTM=0.416 ipTM=0.445 tol=4.92
2024-07-12 09:37:50,013 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=49.8 pTM=0.415 ipTM=0.452 tol=6.38
2024-07-12 09:38:49,819 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=49.8 pTM=0.417 ipTM=0.447 tol=6.04
2024-07-12 09:39:49,618 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=49.9 pTM=0.416 ipTM=0.444 tol=5.52
2024-07-12 09:40:49,398 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=49.9 pTM=0.416 ipTM=0.451 tol=3.92
2024-07-12 09:40:49,399 alphafold2_multimer_v3_model_5_seed_000 took 1853.9s (30 recycles)
2024-07-12 09:40:50,640 reranking models by 'multimer' metric
2024-07-12 09:41:22,747 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 09:45:52,644 Relaxation took 302.0s
2024-07-12 09:45:52,644 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=49 pTM=0.425 ipTM=0.582
2024-07-12 09:49:10,240 Relaxation took 197.6s
2024-07-12 09:49:10,240 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=49.3 pTM=0.415 ipTM=0.466
2024-07-12 09:51:53,026 Relaxation took 162.8s
2024-07-12 09:51:53,026 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=47.9 pTM=0.427 ipTM=0.456
2024-07-12 09:54:35,974 Relaxation took 162.9s
2024-07-12 09:54:35,974 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=49.9 pTM=0.416 ipTM=0.451
2024-07-12 09:57:13,993 Relaxation took 158.0s
2024-07-12 09:57:13,993 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=50 pTM=0.406 ipTM=0.226
2024-07-12 09:57:17,100 Done