2024-07-12 07:24:12,678 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 07:24:12,999 Running on GPU
2024-07-12 07:24:16,677 Found 6 citations for tools or databases
2024-07-12 07:24:16,678 Query 1/1: PHKG2_TYY2 (length 778)
2024-07-12 07:24:17,137 Sleeping for 9s. Reason: PENDING
2024-07-12 07:24:26,578 Sleeping for 7s. Reason: RUNNING
2024-07-12 07:24:33,995 Sleeping for 9s. Reason: RUNNING
2024-07-12 07:24:43,433 Sleeping for 5s. Reason: RUNNING
2024-07-12 07:24:48,874 Sleeping for 10s. Reason: RUNNING
2024-07-12 07:24:59,298 Sleeping for 5s. Reason: RUNNING
2024-07-12 07:25:04,723 Sleeping for 10s. Reason: RUNNING
2024-07-12 07:25:15,153 Sleeping for 10s. Reason: RUNNING
2024-07-12 07:25:25,575 Sleeping for 10s. Reason: RUNNING
2024-07-12 07:25:36,026 Sleeping for 6s. Reason: RUNNING
2024-07-12 07:25:42,442 Sleeping for 5s. Reason: RUNNING
2024-07-12 07:25:47,930 Sleeping for 10s. Reason: RUNNING
2024-07-12 07:25:58,354 Sleeping for 9s. Reason: RUNNING
2024-07-12 07:26:07,774 Sleeping for 5s. Reason: RUNNING
2024-07-12 07:26:13,194 Sleeping for 8s. Reason: RUNNING
2024-07-12 07:26:21,627 Sleeping for 9s. Reason: RUNNING
2024-07-12 07:26:31,042 Sleeping for 5s. Reason: RUNNING
2024-07-12 07:26:36,463 Sleeping for 5s. Reason: RUNNING
2024-07-12 07:26:41,904 Sleeping for 10s. Reason: RUNNING
2024-07-12 07:26:52,328 Sleeping for 6s. Reason: RUNNING
2024-07-12 07:26:58,760 Sleeping for 8s. Reason: RUNNING
2024-07-12 07:27:07,196 Sleeping for 6s. Reason: RUNNING
2024-07-12 07:27:13,641 Sleeping for 8s. Reason: RUNNING
2024-07-12 07:27:22,058 Sleeping for 10s. Reason: RUNNING
2024-07-12 07:27:32,480 Sleeping for 9s. Reason: RUNNING
2024-07-12 07:27:41,904 Sleeping for 10s. Reason: RUNNING
2024-07-12 07:27:52,367 Sleeping for 8s. Reason: RUNNING
2024-07-12 07:28:02,721 Sleeping for 8s. Reason: PENDING
2024-07-12 07:28:11,160 Sleeping for 8s. Reason: RUNNING
2024-07-12 07:28:19,593 Sleeping for 7s. Reason: RUNNING
2024-07-12 07:28:27,040 Sleeping for 9s. Reason: RUNNING
2024-07-12 07:28:36,453 Sleeping for 5s. Reason: RUNNING
2024-07-12 07:28:41,861 Sleeping for 8s. Reason: RUNNING
2024-07-12 07:28:50,298 Sleeping for 5s. Reason: RUNNING
2024-07-12 07:28:55,726 Sleeping for 6s. Reason: RUNNING
2024-07-12 07:29:02,152 Sleeping for 10s. Reason: RUNNING
2024-07-12 07:29:12,570 Sleeping for 9s. Reason: RUNNING
2024-07-12 07:29:21,992 Sleeping for 6s. Reason: RUNNING
2024-07-12 07:29:28,419 Sleeping for 9s. Reason: RUNNING
2024-07-12 07:29:37,841 Sleeping for 8s. Reason: RUNNING
2024-07-12 07:29:46,271 Sleeping for 8s. Reason: RUNNING
2024-07-12 07:29:54,682 Sleeping for 9s. Reason: RUNNING
2024-07-12 07:30:08,221 Setting max_seq=508, max_extra_seq=2048
2024-07-12 07:32:47,443 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=52 pTM=0.478 ipTM=0.194
2024-07-12 07:32:59,669 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=52.6 pTM=0.49 ipTM=0.206 tol=9.77
2024-07-12 07:33:11,916 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=51.7 pTM=0.48 ipTM=0.285 tol=5.42
2024-07-12 07:33:24,208 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=51.9 pTM=0.472 ipTM=0.256 tol=2.78
2024-07-12 07:33:36,519 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=51.8 pTM=0.467 ipTM=0.237 tol=2.27
2024-07-12 07:33:48,834 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=51.7 pTM=0.47 ipTM=0.259 tol=2.36
2024-07-12 07:34:01,163 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=52.1 pTM=0.469 ipTM=0.268 tol=2.29
2024-07-12 07:34:13,504 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=51.7 pTM=0.468 ipTM=0.261 tol=1.36
2024-07-12 07:34:25,848 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=51.8 pTM=0.469 ipTM=0.262 tol=1.32
2024-07-12 07:34:38,192 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=52.2 pTM=0.467 ipTM=0.241 tol=1.5
2024-07-12 07:34:50,560 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=52.2 pTM=0.465 ipTM=0.263 tol=2.17
2024-07-12 07:35:02,930 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=51.9 pTM=0.466 ipTM=0.257 tol=2.07
2024-07-12 07:35:15,283 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=51.7 pTM=0.468 ipTM=0.246 tol=1.98
2024-07-12 07:35:27,639 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=51.4 pTM=0.466 ipTM=0.25 tol=1.48
2024-07-12 07:35:40,009 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=52.2 pTM=0.473 ipTM=0.344 tol=1.56
2024-07-12 07:35:52,374 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=51.9 pTM=0.466 ipTM=0.301 tol=2.15
2024-07-12 07:36:04,735 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=51.8 pTM=0.469 ipTM=0.265 tol=2.54
2024-07-12 07:36:17,121 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=52 pTM=0.47 ipTM=0.299 tol=1.22
2024-07-12 07:36:29,508 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=52 pTM=0.467 ipTM=0.262 tol=1.51
2024-07-12 07:36:41,868 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=51.7 pTM=0.469 ipTM=0.242 tol=1.88
2024-07-12 07:36:54,232 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=51.8 pTM=0.468 ipTM=0.268 tol=1.26
2024-07-12 07:37:06,613 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=51.6 pTM=0.468 ipTM=0.249 tol=0.893
2024-07-12 07:37:19,003 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=51.7 pTM=0.467 ipTM=0.259 tol=1.29
2024-07-12 07:37:31,379 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=51.8 pTM=0.466 ipTM=0.219 tol=1.84
2024-07-12 07:37:43,753 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=51.8 pTM=0.467 ipTM=0.247 tol=1.79
2024-07-12 07:37:56,132 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=51.8 pTM=0.466 ipTM=0.259 tol=1.01
2024-07-12 07:38:08,511 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=51.9 pTM=0.47 ipTM=0.278 tol=1.62
2024-07-12 07:38:20,874 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=51.3 pTM=0.465 ipTM=0.214 tol=1.35
2024-07-12 07:38:33,248 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=51.8 pTM=0.467 ipTM=0.259 tol=1.75
2024-07-12 07:38:45,639 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=51.8 pTM=0.466 ipTM=0.273 tol=1.51
2024-07-12 07:38:58,013 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=51.6 pTM=0.466 ipTM=0.233 tol=1.23
2024-07-12 07:38:58,014 alphafold2_multimer_v3_model_1_seed_000 took 526.2s (30 recycles)
2024-07-12 07:39:10,800 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=51.4 pTM=0.45 ipTM=0.145
2024-07-12 07:39:23,227 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=53.2 pTM=0.478 ipTM=0.476 tol=14
2024-07-12 07:39:35,643 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=52.1 pTM=0.458 ipTM=0.281 tol=6.61
2024-07-12 07:39:48,063 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=52 pTM=0.455 ipTM=0.276 tol=5.18
2024-07-12 07:40:00,497 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=52.2 pTM=0.456 ipTM=0.317 tol=3.28
2024-07-12 07:40:12,934 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=52 pTM=0.452 ipTM=0.25 tol=4.64
2024-07-12 07:40:25,363 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=52.3 pTM=0.46 ipTM=0.288 tol=4.16
2024-07-12 07:40:37,801 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=52.2 pTM=0.454 ipTM=0.272 tol=4.52
2024-07-12 07:40:50,240 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=52.5 pTM=0.458 ipTM=0.322 tol=4.71
2024-07-12 07:41:02,666 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=52.8 pTM=0.453 ipTM=0.248 tol=3.84
2024-07-12 07:41:15,086 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=52.6 pTM=0.456 ipTM=0.296 tol=5.63
2024-07-12 07:41:27,529 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=53 pTM=0.454 ipTM=0.279 tol=3.19
2024-07-12 07:41:39,946 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=53.1 pTM=0.461 ipTM=0.327 tol=2.68
2024-07-12 07:41:52,356 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=52.5 pTM=0.454 ipTM=0.256 tol=2.97
2024-07-12 07:42:04,773 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=52.6 pTM=0.459 ipTM=0.33 tol=2.7
2024-07-12 07:42:17,217 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=52.7 pTM=0.455 ipTM=0.255 tol=2.46
2024-07-12 07:42:29,644 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=53 pTM=0.459 ipTM=0.33 tol=2.46
2024-07-12 07:42:42,077 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=52.8 pTM=0.46 ipTM=0.263 tol=2.34
2024-07-12 07:42:54,508 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=52.9 pTM=0.462 ipTM=0.307 tol=1.89
2024-07-12 07:43:06,947 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=52.8 pTM=0.457 ipTM=0.266 tol=2.31
2024-07-12 07:43:19,378 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=52.9 pTM=0.459 ipTM=0.315 tol=2.82
2024-07-12 07:43:31,805 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=52.7 pTM=0.459 ipTM=0.252 tol=2.19
2024-07-12 07:43:44,213 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=52.3 pTM=0.457 ipTM=0.253 tol=1.49
2024-07-12 07:43:56,647 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=52.4 pTM=0.458 ipTM=0.232 tol=1.81
2024-07-12 07:44:09,062 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=52.3 pTM=0.456 ipTM=0.23 tol=3.35
2024-07-12 07:44:21,480 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=52.5 pTM=0.46 ipTM=0.24 tol=2.45
2024-07-12 07:44:33,906 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=52.6 pTM=0.458 ipTM=0.236 tol=2.23
2024-07-12 07:44:46,327 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=52.3 pTM=0.458 ipTM=0.249 tol=2.31
2024-07-12 07:44:58,727 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=52.1 pTM=0.458 ipTM=0.277 tol=1.64
2024-07-12 07:45:11,148 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=52.4 pTM=0.458 ipTM=0.244 tol=2.52
2024-07-12 07:45:23,560 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=52.4 pTM=0.456 ipTM=0.251 tol=3.13
2024-07-12 07:45:23,561 alphafold2_multimer_v3_model_2_seed_000 took 385.2s (30 recycles)
2024-07-12 07:45:36,349 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=50.3 pTM=0.469 ipTM=0.217
2024-07-12 07:45:48,757 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=51.1 pTM=0.462 ipTM=0.162 tol=7.53
2024-07-12 07:46:01,182 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=51.5 pTM=0.466 ipTM=0.154 tol=2.89
2024-07-12 07:46:13,614 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=51.2 pTM=0.457 ipTM=0.147 tol=2.28
2024-07-12 07:46:26,048 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=51.2 pTM=0.457 ipTM=0.146 tol=1.84
2024-07-12 07:46:38,496 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=51.4 pTM=0.457 ipTM=0.148 tol=1.31
2024-07-12 07:46:50,942 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=51.5 pTM=0.454 ipTM=0.142 tol=1.33
2024-07-12 07:47:03,378 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=51.1 pTM=0.455 ipTM=0.149 tol=1.45
2024-07-12 07:47:15,821 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=51.2 pTM=0.454 ipTM=0.159 tol=3.62
2024-07-12 07:47:28,265 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=51.4 pTM=0.458 ipTM=0.153 tol=2.28
2024-07-12 07:47:40,712 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=51.5 pTM=0.454 ipTM=0.144 tol=2.49
2024-07-12 07:47:53,175 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=51.4 pTM=0.456 ipTM=0.149 tol=1.62
2024-07-12 07:48:05,632 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=51.4 pTM=0.453 ipTM=0.143 tol=3.34
2024-07-12 07:48:18,079 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=51.1 pTM=0.454 ipTM=0.146 tol=2.47
2024-07-12 07:48:30,531 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=51.2 pTM=0.453 ipTM=0.146 tol=3.01
2024-07-12 07:48:42,975 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=51 pTM=0.457 ipTM=0.168 tol=4.29
2024-07-12 07:48:55,443 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=51.3 pTM=0.458 ipTM=0.151 tol=2.36
2024-07-12 07:49:07,888 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=50.9 pTM=0.456 ipTM=0.149 tol=2.64
2024-07-12 07:49:20,351 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=51.2 pTM=0.46 ipTM=0.213 tol=3.85
2024-07-12 07:49:32,797 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=51 pTM=0.46 ipTM=0.174 tol=2.33
2024-07-12 07:49:45,237 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=50.9 pTM=0.458 ipTM=0.171 tol=1.83
2024-07-12 07:49:57,698 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=51 pTM=0.459 ipTM=0.214 tol=2.75
2024-07-12 07:50:10,152 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=51 pTM=0.459 ipTM=0.207 tol=2.31
2024-07-12 07:50:22,621 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=50.9 pTM=0.459 ipTM=0.198 tol=2.8
2024-07-12 07:50:35,096 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=51 pTM=0.458 ipTM=0.163 tol=3.06
2024-07-12 07:50:47,549 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=50.7 pTM=0.46 ipTM=0.197 tol=2.92
2024-07-12 07:50:59,995 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=51.2 pTM=0.464 ipTM=0.215 tol=3.04
2024-07-12 07:51:12,443 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=50.8 pTM=0.46 ipTM=0.179 tol=2.29
2024-07-12 07:51:24,889 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=51 pTM=0.463 ipTM=0.197 tol=1.95
2024-07-12 07:51:37,366 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=51.1 pTM=0.462 ipTM=0.204 tol=3.42
2024-07-12 07:51:49,836 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=51.2 pTM=0.461 ipTM=0.166 tol=3.02
2024-07-12 07:51:49,837 alphafold2_multimer_v3_model_3_seed_000 took 385.9s (30 recycles)
2024-07-12 07:52:02,651 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=51 pTM=0.469 ipTM=0.26
2024-07-12 07:52:15,093 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=51.6 pTM=0.455 ipTM=0.206 tol=9.54
2024-07-12 07:52:27,533 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=52.1 pTM=0.47 ipTM=0.352 tol=3.46
2024-07-12 07:52:39,978 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=52.3 pTM=0.465 ipTM=0.265 tol=3.33
2024-07-12 07:52:52,399 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=52.4 pTM=0.477 ipTM=0.353 tol=6.38
2024-07-12 07:53:04,835 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=52.9 pTM=0.472 ipTM=0.288 tol=5.44
2024-07-12 07:53:17,261 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=52.6 pTM=0.474 ipTM=0.311 tol=2.55
2024-07-12 07:53:29,686 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=52.8 pTM=0.475 ipTM=0.272 tol=1.71
2024-07-12 07:53:42,107 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=53.4 pTM=0.482 ipTM=0.348 tol=1.98
2024-07-12 07:53:54,537 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=53.3 pTM=0.479 ipTM=0.289 tol=1.75
2024-07-12 07:54:06,968 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=53.3 pTM=0.479 ipTM=0.353 tol=1.99
2024-07-12 07:54:19,400 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=53.2 pTM=0.479 ipTM=0.298 tol=1.77
2024-07-12 07:54:31,834 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=53.4 pTM=0.484 ipTM=0.333 tol=1.73
2024-07-12 07:54:44,257 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=52.8 pTM=0.476 ipTM=0.305 tol=1.4
2024-07-12 07:54:56,705 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=53 pTM=0.482 ipTM=0.347 tol=2
2024-07-12 07:55:09,139 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=53.1 pTM=0.479 ipTM=0.297 tol=1.43
2024-07-12 07:55:21,567 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=53 pTM=0.48 ipTM=0.331 tol=2.1
2024-07-12 07:55:33,990 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=52.8 pTM=0.482 ipTM=0.305 tol=1.8
2024-07-12 07:55:46,422 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=53 pTM=0.482 ipTM=0.336 tol=1.53
2024-07-12 07:55:58,849 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=52.9 pTM=0.478 ipTM=0.268 tol=1.43
2024-07-12 07:56:11,278 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=53 pTM=0.482 ipTM=0.319 tol=1.82
2024-07-12 07:56:23,702 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=52.9 pTM=0.477 ipTM=0.296 tol=1.9
2024-07-12 07:56:36,143 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=53 pTM=0.485 ipTM=0.335 tol=1.36
2024-07-12 07:56:48,596 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=53.1 pTM=0.482 ipTM=0.291 tol=1.88
2024-07-12 07:57:01,024 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=52.8 pTM=0.48 ipTM=0.357 tol=1.97
2024-07-12 07:57:13,449 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=52.9 pTM=0.478 ipTM=0.292 tol=1.45
2024-07-12 07:57:25,879 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=53.2 pTM=0.485 ipTM=0.359 tol=2.2
2024-07-12 07:57:38,301 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=52.8 pTM=0.479 ipTM=0.285 tol=1.3
2024-07-12 07:57:50,723 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=52.6 pTM=0.481 ipTM=0.303 tol=1.94
2024-07-12 07:58:03,152 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=52.9 pTM=0.477 ipTM=0.259 tol=2.39
2024-07-12 07:58:15,596 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=52.8 pTM=0.48 ipTM=0.325 tol=1.59
2024-07-12 07:58:15,597 alphafold2_multimer_v3_model_4_seed_000 took 385.4s (30 recycles)
2024-07-12 07:58:28,411 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=51 pTM=0.472 ipTM=0.249
2024-07-12 07:58:40,889 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=52 pTM=0.455 ipTM=0.234 tol=8.84
2024-07-12 07:58:53,381 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=52.2 pTM=0.449 ipTM=0.185 tol=4.65
2024-07-12 07:59:05,854 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=52.4 pTM=0.448 ipTM=0.168 tol=4.08
2024-07-12 07:59:18,331 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=52 pTM=0.45 ipTM=0.23 tol=3.38
2024-07-12 07:59:30,815 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=52.5 pTM=0.447 ipTM=0.177 tol=2.73
2024-07-12 07:59:43,298 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=52.8 pTM=0.45 ipTM=0.243 tol=2.82
2024-07-12 07:59:55,784 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=52.4 pTM=0.446 ipTM=0.18 tol=2.24
2024-07-12 08:00:08,290 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=52.4 pTM=0.447 ipTM=0.202 tol=3.52
2024-07-12 08:00:20,799 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=52.3 pTM=0.448 ipTM=0.189 tol=2.46
2024-07-12 08:00:33,309 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=52.2 pTM=0.447 ipTM=0.211 tol=2.24
2024-07-12 08:00:45,821 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=52.2 pTM=0.449 ipTM=0.18 tol=1.63
2024-07-12 08:00:58,333 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=52.2 pTM=0.449 ipTM=0.204 tol=2.58
2024-07-12 08:01:10,821 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=52 pTM=0.446 ipTM=0.199 tol=2.14
2024-07-12 08:01:23,314 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=51.9 pTM=0.448 ipTM=0.197 tol=1.89
2024-07-12 08:01:35,810 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=52 pTM=0.449 ipTM=0.194 tol=2.29
2024-07-12 08:01:48,308 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=51.9 pTM=0.448 ipTM=0.197 tol=1.52
2024-07-12 08:02:00,786 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=51.4 pTM=0.449 ipTM=0.19 tol=1.46
2024-07-12 08:02:13,265 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=51.9 pTM=0.45 ipTM=0.22 tol=1.32
2024-07-12 08:02:25,765 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=51.8 pTM=0.447 ipTM=0.17 tol=3.44
2024-07-12 08:02:38,269 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=51.7 pTM=0.446 ipTM=0.16 tol=3.05
2024-07-12 08:02:50,771 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=51.6 pTM=0.448 ipTM=0.215 tol=2.3
2024-07-12 08:03:03,264 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=51.7 pTM=0.451 ipTM=0.198 tol=2.58
2024-07-12 08:03:15,766 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=51.7 pTM=0.448 ipTM=0.191 tol=1.64
2024-07-12 08:03:28,263 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=51.5 pTM=0.449 ipTM=0.209 tol=2.23
2024-07-12 08:03:40,771 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=51.5 pTM=0.448 ipTM=0.167 tol=2.63
2024-07-12 08:03:53,274 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=51.6 pTM=0.452 ipTM=0.251 tol=1.8
2024-07-12 08:04:05,766 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=51.5 pTM=0.448 ipTM=0.167 tol=2.21
2024-07-12 08:04:18,252 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=51.7 pTM=0.449 ipTM=0.149 tol=2.46
2024-07-12 08:04:30,745 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=51.5 pTM=0.451 ipTM=0.255 tol=2.7
2024-07-12 08:04:43,247 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=51.7 pTM=0.448 ipTM=0.18 tol=2.69
2024-07-12 08:04:43,248 alphafold2_multimer_v3_model_5_seed_000 took 387.3s (30 recycles)
2024-07-12 08:04:43,636 reranking models by 'multimer' metric
2024-07-12 08:05:19,608 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 08:06:25,028 Relaxation took 101.4s
2024-07-12 08:06:25,028 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=52.8 pTM=0.48 ipTM=0.325
2024-07-12 08:07:33,290 Relaxation took 68.3s
2024-07-12 08:07:33,290 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=52.4 pTM=0.456 ipTM=0.251
2024-07-12 08:08:59,855 Relaxation took 86.6s
2024-07-12 08:08:59,856 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=51.6 pTM=0.466 ipTM=0.233
2024-07-12 08:10:01,962 Relaxation took 62.1s
2024-07-12 08:10:01,963 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=51.7 pTM=0.448 ipTM=0.18
2024-07-12 08:11:18,554 Relaxation took 76.6s
2024-07-12 08:11:18,555 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=51.2 pTM=0.461 ipTM=0.166
2024-07-12 08:11:21,018 Done