2024-07-12 07:44:52,173 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-12 07:44:52,516 Running on GPU 2024-07-12 07:45:07,777 Found 6 citations for tools or databases 2024-07-12 07:45:07,777 Query 1/1: PIGR_GNAQ (length 1123) 2024-07-12 07:45:08,224 Sleeping for 6s. Reason: PENDING 2024-07-12 07:45:14,683 Sleeping for 5s. Reason: RUNNING 2024-07-12 07:45:20,094 Sleeping for 7s. Reason: RUNNING 2024-07-12 07:45:27,523 Sleeping for 9s. Reason: RUNNING 2024-07-12 07:45:36,944 Sleeping for 7s. Reason: RUNNING 2024-07-12 07:45:44,377 Sleeping for 6s. Reason: RUNNING 2024-07-12 07:45:50,806 Sleeping for 6s. Reason: RUNNING 2024-07-12 07:45:57,226 Sleeping for 10s. Reason: RUNNING 2024-07-12 07:46:07,638 Sleeping for 5s. Reason: RUNNING 2024-07-12 07:46:13,051 Sleeping for 6s. Reason: RUNNING 2024-07-12 07:46:19,465 Sleeping for 9s. Reason: RUNNING 2024-07-12 07:46:28,896 Sleeping for 8s. Reason: RUNNING 2024-07-12 07:46:37,338 Sleeping for 10s. Reason: RUNNING 2024-07-12 07:46:47,783 Sleeping for 10s. Reason: RUNNING 2024-07-12 07:46:58,240 Sleeping for 9s. Reason: RUNNING 2024-07-12 07:47:07,669 Sleeping for 7s. Reason: RUNNING 2024-07-12 07:47:15,083 Sleeping for 10s. Reason: RUNNING 2024-07-12 07:47:25,518 Sleeping for 9s. Reason: RUNNING 2024-07-12 07:47:34,949 Sleeping for 9s. Reason: RUNNING 2024-07-12 07:47:44,371 Sleeping for 9s. Reason: RUNNING 2024-07-12 07:47:53,811 Sleeping for 5s. Reason: RUNNING 2024-07-12 07:47:59,297 Sleeping for 5s. Reason: RUNNING 2024-07-12 07:48:04,707 Sleeping for 6s. Reason: RUNNING 2024-07-12 07:48:11,134 Sleeping for 6s. Reason: RUNNING 2024-07-12 07:48:17,544 Sleeping for 8s. Reason: RUNNING 2024-07-12 07:48:25,977 Sleeping for 7s. Reason: RUNNING 2024-07-12 07:48:33,392 Sleeping for 7s. Reason: RUNNING 2024-07-12 07:48:40,811 Sleeping for 5s. Reason: RUNNING 2024-07-12 07:48:46,222 Sleeping for 9s. Reason: RUNNING 2024-07-12 07:48:55,674 Sleeping for 10s. Reason: RUNNING 2024-07-12 07:49:06,113 Sleeping for 8s. Reason: RUNNING 2024-07-12 07:49:14,529 Sleeping for 6s. Reason: RUNNING 2024-07-12 07:49:20,956 Sleeping for 7s. Reason: RUNNING 2024-07-12 07:49:30,216 Sleeping for 5s. Reason: PENDING 2024-07-12 07:49:35,668 Sleeping for 8s. Reason: RUNNING 2024-07-12 07:49:44,114 Sleeping for 8s. Reason: RUNNING 2024-07-12 07:49:52,554 Sleeping for 6s. Reason: RUNNING 2024-07-12 07:49:58,997 Sleeping for 9s. Reason: RUNNING 2024-07-12 07:50:08,428 Sleeping for 5s. Reason: RUNNING 2024-07-12 07:50:13,840 Sleeping for 10s. Reason: RUNNING 2024-07-12 07:50:24,266 Sleeping for 9s. Reason: RUNNING 2024-07-12 07:50:33,690 Sleeping for 8s. Reason: RUNNING 2024-07-12 07:50:42,104 Sleeping for 8s. Reason: RUNNING 2024-07-12 07:50:50,544 Sleeping for 10s. Reason: RUNNING 2024-07-12 07:51:00,988 Sleeping for 5s. Reason: RUNNING 2024-07-12 07:51:10,776 Setting max_seq=508, max_extra_seq=2048 2024-07-12 07:54:16,471 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=68.7 pTM=0.498 ipTM=0.225 2024-07-12 07:54:44,631 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=69.4 pTM=0.508 ipTM=0.278 tol=13.3 2024-07-12 07:55:12,895 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=70.9 pTM=0.524 ipTM=0.375 tol=7 2024-07-12 07:55:41,263 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=71.3 pTM=0.513 ipTM=0.519 tol=5.99 2024-07-12 07:56:09,762 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=71.4 pTM=0.508 ipTM=0.538 tol=7.4 2024-07-12 07:56:38,309 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=71.3 pTM=0.506 ipTM=0.522 tol=6.36 2024-07-12 07:57:06,888 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=71.1 pTM=0.503 ipTM=0.545 tol=5.36 2024-07-12 07:57:35,483 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=71.1 pTM=0.5 ipTM=0.527 tol=2.85 2024-07-12 07:58:04,065 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=71 pTM=0.501 ipTM=0.538 tol=5.42 2024-07-12 07:58:32,659 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=70.9 pTM=0.501 ipTM=0.526 tol=1.67 2024-07-12 07:59:02,744 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=71.2 pTM=0.503 ipTM=0.555 tol=3.57 2024-07-12 07:59:31,331 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=71.6 pTM=0.508 ipTM=0.545 tol=3.3 2024-07-12 07:59:59,914 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=72 pTM=0.528 ipTM=0.545 tol=1.96 2024-07-12 08:00:28,541 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=71.8 pTM=0.51 ipTM=0.53 tol=1.47 2024-07-12 08:00:57,128 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=71.5 pTM=0.509 ipTM=0.534 tol=0.988 2024-07-12 08:01:25,707 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=71.8 pTM=0.512 ipTM=0.527 tol=0.713 2024-07-12 08:01:54,309 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=71.4 pTM=0.512 ipTM=0.533 tol=0.845 2024-07-12 08:02:22,909 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=71.8 pTM=0.516 ipTM=0.554 tol=1.85 2024-07-12 08:02:51,494 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=71.4 pTM=0.517 ipTM=0.534 tol=1.67 2024-07-12 08:03:20,100 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=71.6 pTM=0.518 ipTM=0.54 tol=1.63 2024-07-12 08:03:48,692 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=71.4 pTM=0.51 ipTM=0.536 tol=2.04 2024-07-12 08:04:17,296 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=71.4 pTM=0.517 ipTM=0.535 tol=1.77 2024-07-12 08:04:45,920 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=71.3 pTM=0.506 ipTM=0.523 tol=1.93 2024-07-12 08:05:14,535 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=71 pTM=0.504 ipTM=0.536 tol=1.69 2024-07-12 08:05:43,162 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=70.8 pTM=0.503 ipTM=0.518 tol=3.97 2024-07-12 08:06:11,752 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=71.4 pTM=0.508 ipTM=0.536 tol=3.21 2024-07-12 08:06:40,316 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=71.7 pTM=0.505 ipTM=0.554 tol=4.07 2024-07-12 08:07:08,899 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=71 pTM=0.502 ipTM=0.532 tol=3.2 2024-07-12 08:07:37,498 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=70.9 pTM=0.501 ipTM=0.53 tol=1.22 2024-07-12 08:08:06,123 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=71 pTM=0.503 ipTM=0.501 tol=1.17 2024-07-12 08:08:34,731 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=71.1 pTM=0.501 ipTM=0.519 tol=1.43 2024-07-12 08:08:34,732 alphafold2_multimer_v3_model_1_seed_000 took 1040.4s (30 recycles) 2024-07-12 08:09:04,145 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=67 pTM=0.487 ipTM=0.212 2024-07-12 08:09:32,815 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=70.4 pTM=0.504 ipTM=0.317 tol=10.2 2024-07-12 08:10:01,504 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=70.8 pTM=0.504 ipTM=0.206 tol=9.34 2024-07-12 08:10:30,200 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=71.4 pTM=0.504 ipTM=0.205 tol=8.64 2024-07-12 08:10:58,892 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=71.8 pTM=0.499 ipTM=0.192 tol=7.97 2024-07-12 08:11:27,591 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=71.6 pTM=0.499 ipTM=0.206 tol=5.93 2024-07-12 08:11:56,295 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=71.4 pTM=0.499 ipTM=0.196 tol=4.46 2024-07-12 08:12:24,972 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=71.1 pTM=0.5 ipTM=0.208 tol=6.81 2024-07-12 08:12:53,707 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=71.1 pTM=0.491 ipTM=0.182 tol=6.99 2024-07-12 08:13:22,456 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=71.1 pTM=0.49 ipTM=0.182 tol=5.85 2024-07-12 08:13:51,205 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=71.1 pTM=0.486 ipTM=0.175 tol=3.47 2024-07-12 08:14:19,975 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=71 pTM=0.484 ipTM=0.173 tol=3.27 2024-07-12 08:14:48,731 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=70.9 pTM=0.48 ipTM=0.176 tol=1.69 2024-07-12 08:15:17,510 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=70.9 pTM=0.48 ipTM=0.175 tol=1.85 2024-07-12 08:15:46,280 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=71 pTM=0.478 ipTM=0.178 tol=4.76 2024-07-12 08:16:15,049 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=70.9 pTM=0.479 ipTM=0.181 tol=2.81 2024-07-12 08:16:43,814 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=70.9 pTM=0.477 ipTM=0.197 tol=1.88 2024-07-12 08:17:12,583 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=70.9 pTM=0.48 ipTM=0.206 tol=3 2024-07-12 08:17:41,335 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=70.9 pTM=0.481 ipTM=0.204 tol=2.62 2024-07-12 08:18:10,092 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=71.1 pTM=0.483 ipTM=0.196 tol=1.25 2024-07-12 08:18:38,811 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=71.2 pTM=0.484 ipTM=0.202 tol=1.81 2024-07-12 08:19:07,506 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=71.3 pTM=0.482 ipTM=0.201 tol=2.37 2024-07-12 08:19:36,224 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=71.1 pTM=0.483 ipTM=0.191 tol=2.29 2024-07-12 08:20:04,910 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=71.2 pTM=0.486 ipTM=0.203 tol=1.54 2024-07-12 08:20:33,578 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=71.4 pTM=0.487 ipTM=0.205 tol=2.43 2024-07-12 08:21:02,257 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=71.3 pTM=0.489 ipTM=0.205 tol=3.56 2024-07-12 08:21:30,959 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=71.2 pTM=0.485 ipTM=0.208 tol=3.1 2024-07-12 08:21:59,649 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=71.1 pTM=0.486 ipTM=0.192 tol=1.84 2024-07-12 08:22:28,358 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=71.1 pTM=0.486 ipTM=0.203 tol=2.16 2024-07-12 08:22:57,046 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=71.6 pTM=0.49 ipTM=0.232 tol=2.79 2024-07-12 08:23:25,723 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=71.2 pTM=0.487 ipTM=0.212 tol=2.52 2024-07-12 08:23:25,724 alphafold2_multimer_v3_model_2_seed_000 took 890.2s (30 recycles) 2024-07-12 08:23:55,131 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=68.4 pTM=0.504 ipTM=0.245 2024-07-12 08:24:23,856 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=70.6 pTM=0.511 ipTM=0.389 tol=18.7 2024-07-12 08:24:52,616 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=70.8 pTM=0.509 ipTM=0.48 tol=8.84 2024-07-12 08:25:21,342 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=71 pTM=0.517 ipTM=0.479 tol=7.07 2024-07-12 08:25:50,061 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=71.1 pTM=0.509 ipTM=0.457 tol=4.11 2024-07-12 08:26:18,767 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=71.2 pTM=0.521 ipTM=0.486 tol=4.43 2024-07-12 08:26:47,489 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=71.3 pTM=0.511 ipTM=0.458 tol=5 2024-07-12 08:27:16,198 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=71.2 pTM=0.52 ipTM=0.437 tol=4.95 2024-07-12 08:27:44,915 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=71 pTM=0.51 ipTM=0.416 tol=4.45 2024-07-12 08:28:13,617 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=71.4 pTM=0.511 ipTM=0.427 tol=4.53 2024-07-12 08:28:42,333 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=71.1 pTM=0.515 ipTM=0.446 tol=4.73 2024-07-12 08:29:11,017 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=71.3 pTM=0.513 ipTM=0.478 tol=3.33 2024-07-12 08:29:39,734 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=71.1 pTM=0.51 ipTM=0.441 tol=2.72 2024-07-12 08:30:08,450 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=71 pTM=0.516 ipTM=0.45 tol=2.71 2024-07-12 08:30:37,183 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=71.1 pTM=0.511 ipTM=0.427 tol=1.51 2024-07-12 08:31:05,920 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=70.9 pTM=0.516 ipTM=0.425 tol=2.47 2024-07-12 08:31:34,653 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=71.1 pTM=0.515 ipTM=0.434 tol=4.2 2024-07-12 08:32:03,402 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=71.2 pTM=0.513 ipTM=0.468 tol=3.26 2024-07-12 08:32:32,143 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=70.9 pTM=0.515 ipTM=0.454 tol=2.56 2024-07-12 08:33:00,886 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=71.2 pTM=0.516 ipTM=0.486 tol=1.91 2024-07-12 08:33:29,622 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=71 pTM=0.51 ipTM=0.452 tol=2.65 2024-07-12 08:33:58,347 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=70.9 pTM=0.517 ipTM=0.47 tol=2.9 2024-07-12 08:34:27,077 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=71.2 pTM=0.511 ipTM=0.442 tol=2.18 2024-07-12 08:34:55,816 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=70.9 pTM=0.511 ipTM=0.383 tol=2.87 2024-07-12 08:35:24,575 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=70.9 pTM=0.514 ipTM=0.438 tol=4.42 2024-07-12 08:35:53,295 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=71.2 pTM=0.529 ipTM=0.439 tol=14.1 2024-07-12 08:36:22,078 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=70.3 pTM=0.51 ipTM=0.423 tol=10.5 2024-07-12 08:36:50,809 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=70.6 pTM=0.515 ipTM=0.434 tol=11.7 2024-07-12 08:37:19,556 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=70.8 pTM=0.514 ipTM=0.441 tol=4.95 2024-07-12 08:37:48,314 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=70.8 pTM=0.516 ipTM=0.424 tol=3.29 2024-07-12 08:38:17,052 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=70.8 pTM=0.515 ipTM=0.447 tol=4.89 2024-07-12 08:38:17,053 alphafold2_multimer_v3_model_3_seed_000 took 890.6s (30 recycles) 2024-07-12 08:38:46,386 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=67.1 pTM=0.493 ipTM=0.221 2024-07-12 08:39:15,009 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=69.3 pTM=0.51 ipTM=0.211 tol=11.2 2024-07-12 08:39:43,681 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=70.4 pTM=0.511 ipTM=0.275 tol=11.4 2024-07-12 08:40:12,349 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=70.2 pTM=0.511 ipTM=0.226 tol=7.06 2024-07-12 08:40:41,027 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=70.4 pTM=0.514 ipTM=0.218 tol=6.12 2024-07-12 08:41:09,725 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=70.3 pTM=0.512 ipTM=0.228 tol=3.47 2024-07-12 08:41:38,421 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=70.4 pTM=0.51 ipTM=0.208 tol=5.03 2024-07-12 08:42:07,108 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=70.4 pTM=0.506 ipTM=0.214 tol=7.13 2024-07-12 08:42:35,823 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=70.4 pTM=0.508 ipTM=0.203 tol=6.88 2024-07-12 08:43:04,528 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=70.4 pTM=0.512 ipTM=0.226 tol=3.36 2024-07-12 08:43:33,234 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=70.4 pTM=0.511 ipTM=0.231 tol=3.12 2024-07-12 08:44:01,938 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=70.6 pTM=0.506 ipTM=0.216 tol=5.21 2024-07-12 08:44:30,645 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=70.5 pTM=0.507 ipTM=0.217 tol=4.45 2024-07-12 08:44:59,362 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.4 pTM=0.508 ipTM=0.217 tol=3.05 2024-07-12 08:45:28,069 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=70.4 pTM=0.509 ipTM=0.208 tol=2.18 2024-07-12 08:45:56,778 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.4 pTM=0.509 ipTM=0.206 tol=2.32 2024-07-12 08:46:25,493 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.6 pTM=0.512 ipTM=0.221 tol=4.89 2024-07-12 08:46:54,195 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=70.4 pTM=0.515 ipTM=0.222 tol=2.71 2024-07-12 08:47:22,910 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=70.4 pTM=0.511 ipTM=0.247 tol=4.53 2024-07-12 08:47:51,624 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70.8 pTM=0.511 ipTM=0.469 tol=5.59 2024-07-12 08:48:20,344 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70.8 pTM=0.511 ipTM=0.491 tol=5.06 2024-07-12 08:48:49,033 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=70.4 pTM=0.513 ipTM=0.485 tol=4.61 2024-07-12 08:49:17,733 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=70.6 pTM=0.513 ipTM=0.491 tol=4.62 2024-07-12 08:49:46,442 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=70.6 pTM=0.512 ipTM=0.45 tol=2.61 2024-07-12 08:50:15,155 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=70.4 pTM=0.513 ipTM=0.46 tol=3.53 2024-07-12 08:50:43,870 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.4 pTM=0.513 ipTM=0.458 tol=2.92 2024-07-12 08:51:12,596 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.4 pTM=0.513 ipTM=0.482 tol=2.84 2024-07-12 08:51:41,315 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=70.7 pTM=0.511 ipTM=0.478 tol=4.2 2024-07-12 08:52:10,047 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=70.4 pTM=0.512 ipTM=0.481 tol=1.96 2024-07-12 08:52:38,764 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=70.6 pTM=0.514 ipTM=0.448 tol=5.17 2024-07-12 08:53:07,463 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70.8 pTM=0.512 ipTM=0.49 tol=3.52 2024-07-12 08:53:07,464 alphafold2_multimer_v3_model_4_seed_000 took 889.6s (30 recycles) 2024-07-12 08:53:36,882 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=67.1 pTM=0.498 ipTM=0.199 2024-07-12 08:54:05,595 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=69.9 pTM=0.5 ipTM=0.215 tol=9.81 2024-07-12 08:54:34,333 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=70.1 pTM=0.493 ipTM=0.209 tol=4.62 2024-07-12 08:55:03,059 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=70.2 pTM=0.489 ipTM=0.493 tol=10.6 2024-07-12 08:55:31,791 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=71.2 pTM=0.496 ipTM=0.461 tol=6.41 2024-07-12 08:56:00,516 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=70.9 pTM=0.497 ipTM=0.481 tol=6.17 2024-07-12 08:56:29,237 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=71.2 pTM=0.496 ipTM=0.434 tol=4.61 2024-07-12 08:56:57,956 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=70.8 pTM=0.494 ipTM=0.388 tol=2.54 2024-07-12 08:57:26,679 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=71 pTM=0.491 ipTM=0.42 tol=2.38 2024-07-12 08:57:55,401 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=70.9 pTM=0.491 ipTM=0.465 tol=2.71 2024-07-12 08:58:24,106 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=71.1 pTM=0.491 ipTM=0.445 tol=2.49 2024-07-12 08:58:52,807 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=70.8 pTM=0.489 ipTM=0.486 tol=2.24 2024-07-12 08:59:21,507 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=70.9 pTM=0.488 ipTM=0.459 tol=2.24 2024-07-12 08:59:50,231 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=70.8 pTM=0.486 ipTM=0.473 tol=1.73 2024-07-12 09:00:18,947 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=70.9 pTM=0.485 ipTM=0.42 tol=1.66 2024-07-12 09:00:47,680 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=70.6 pTM=0.485 ipTM=0.436 tol=1.89 2024-07-12 09:01:16,398 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=70.9 pTM=0.491 ipTM=0.421 tol=2 2024-07-12 09:01:45,144 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=71.1 pTM=0.492 ipTM=0.478 tol=1.78 2024-07-12 09:02:13,861 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=71.2 pTM=0.493 ipTM=0.44 tol=1.64 2024-07-12 09:02:42,594 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=71.2 pTM=0.493 ipTM=0.469 tol=1.52 2024-07-12 09:03:11,322 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=71.2 pTM=0.494 ipTM=0.469 tol=1.47 2024-07-12 09:03:40,057 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=71.1 pTM=0.493 ipTM=0.459 tol=2.5 2024-07-12 09:04:08,791 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=71.1 pTM=0.491 ipTM=0.453 tol=1.14 2024-07-12 09:04:37,519 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=71.2 pTM=0.493 ipTM=0.436 tol=1.55 2024-07-12 09:05:06,237 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=71.1 pTM=0.494 ipTM=0.455 tol=1.12 2024-07-12 09:05:34,961 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=71.3 pTM=0.497 ipTM=0.465 tol=1.27 2024-07-12 09:06:03,699 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=71.3 pTM=0.494 ipTM=0.482 tol=0.842 2024-07-12 09:06:32,430 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=71.1 pTM=0.495 ipTM=0.464 tol=0.934 2024-07-12 09:07:01,171 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=71.1 pTM=0.494 ipTM=0.471 tol=1.34 2024-07-12 09:07:29,886 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=71.4 pTM=0.494 ipTM=0.462 tol=1.37 2024-07-12 09:07:58,591 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=71.2 pTM=0.492 ipTM=0.461 tol=0.949 2024-07-12 09:07:58,592 alphafold2_multimer_v3_model_5_seed_000 took 890.4s (30 recycles) 2024-07-12 09:07:59,360 reranking models by 'multimer' metric 2024-07-12 09:08:16,858 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-12 09:10:28,948 Relaxation took 149.6s 2024-07-12 09:10:28,948 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=71.1 pTM=0.501 ipTM=0.519 2024-07-12 09:12:33,483 Relaxation took 124.5s 2024-07-12 09:12:33,483 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70.8 pTM=0.512 ipTM=0.49 2024-07-12 09:13:47,755 Relaxation took 74.3s 2024-07-12 09:13:47,755 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=71.2 pTM=0.492 ipTM=0.461 2024-07-12 09:14:55,413 Relaxation took 67.7s 2024-07-12 09:14:55,413 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=70.8 pTM=0.515 ipTM=0.447 2024-07-12 09:17:33,604 Relaxation took 158.2s 2024-07-12 09:17:33,605 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=71.2 pTM=0.487 ipTM=0.212 2024-07-12 09:17:38,745 Done