2024-07-12 07:47:35,450 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 07:47:35,771 Running on GPU
2024-07-12 07:47:49,426 Found 6 citations for tools or databases
2024-07-12 07:47:49,426 Query 1/1: PIN1_TTC33 (length 425)
2024-07-12 07:47:49,915 Sleeping for 5s. Reason: PENDING
2024-07-12 07:47:55,334 Sleeping for 5s. Reason: RUNNING
2024-07-12 07:48:00,747 Sleeping for 6s. Reason: RUNNING
2024-07-12 07:48:07,160 Sleeping for 9s. Reason: RUNNING
2024-07-12 07:48:16,578 Sleeping for 9s. Reason: RUNNING
2024-07-12 07:48:26,019 Sleeping for 5s. Reason: RUNNING
2024-07-12 07:48:31,437 Sleeping for 8s. Reason: RUNNING
2024-07-12 07:48:39,862 Sleeping for 5s. Reason: RUNNING
2024-07-12 07:48:45,281 Sleeping for 5s. Reason: RUNNING
2024-07-12 07:48:50,721 Sleeping for 5s. Reason: RUNNING
2024-07-12 07:48:56,138 Sleeping for 6s. Reason: RUNNING
2024-07-12 07:49:02,558 Sleeping for 6s. Reason: RUNNING
2024-07-12 07:49:09,010 Sleeping for 5s. Reason: RUNNING
2024-07-12 07:49:14,439 Sleeping for 6s. Reason: RUNNING
2024-07-12 07:49:20,857 Sleeping for 7s. Reason: RUNNING
2024-07-12 07:49:28,299 Sleeping for 10s. Reason: RUNNING
2024-07-12 07:49:40,408 Sleeping for 6s. Reason: PENDING
2024-07-12 07:49:46,823 Sleeping for 9s. Reason: RUNNING
2024-07-12 07:49:56,238 Sleeping for 5s. Reason: RUNNING
2024-07-12 07:50:01,661 Sleeping for 9s. Reason: RUNNING
2024-07-12 07:50:11,075 Sleeping for 9s. Reason: RUNNING
2024-07-12 07:50:20,498 Sleeping for 6s. Reason: RUNNING
2024-07-12 07:50:28,886 Setting max_seq=508, max_extra_seq=2048
2024-07-12 07:54:22,731 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=62.9 pTM=0.422 ipTM=0.206
2024-07-12 07:54:26,918 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=63.1 pTM=0.408 ipTM=0.17 tol=5.69
2024-07-12 07:54:31,093 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=63.4 pTM=0.403 ipTM=0.175 tol=3.92
2024-07-12 07:54:35,271 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=63.6 pTM=0.402 ipTM=0.18 tol=1.98
2024-07-12 07:54:39,454 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=63.2 pTM=0.39 ipTM=0.158 tol=3.86
2024-07-12 07:54:43,633 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=64.1 pTM=0.406 ipTM=0.196 tol=1.33
2024-07-12 07:54:47,818 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=64.1 pTM=0.401 ipTM=0.159 tol=1.77
2024-07-12 07:54:51,999 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64.8 pTM=0.415 ipTM=0.187 tol=4.91
2024-07-12 07:54:56,191 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64 pTM=0.41 ipTM=0.172 tol=5.06
2024-07-12 07:55:00,378 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.8 pTM=0.409 ipTM=0.178 tol=2.04
2024-07-12 07:55:04,564 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64.6 pTM=0.415 ipTM=0.191 tol=3.04
2024-07-12 07:55:08,757 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=65.2 pTM=0.407 ipTM=0.164 tol=2.35
2024-07-12 07:55:12,947 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.4 pTM=0.41 ipTM=0.181 tol=1.84
2024-07-12 07:55:17,135 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64.9 pTM=0.405 ipTM=0.167 tol=1.54
2024-07-12 07:55:21,324 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=64.6 pTM=0.412 ipTM=0.183 tol=1.75
2024-07-12 07:55:25,512 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=65.2 pTM=0.397 ipTM=0.149 tol=1.71
2024-07-12 07:55:29,702 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.2 pTM=0.393 ipTM=0.152 tol=2.38
2024-07-12 07:55:33,888 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.6 pTM=0.407 ipTM=0.174 tol=4.27
2024-07-12 07:55:38,086 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.1 pTM=0.406 ipTM=0.169 tol=5.55
2024-07-12 07:55:42,274 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=64.9 pTM=0.395 ipTM=0.144 tol=3.41
2024-07-12 07:55:46,459 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=64.4 pTM=0.401 ipTM=0.168 tol=3.49
2024-07-12 07:55:50,639 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64.8 pTM=0.406 ipTM=0.188 tol=2.55
2024-07-12 07:55:54,826 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.2 pTM=0.4 ipTM=0.162 tol=2.04
2024-07-12 07:55:59,015 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=65 pTM=0.402 ipTM=0.158 tol=2.6
2024-07-12 07:56:03,207 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=64.1 pTM=0.404 ipTM=0.163 tol=2.03
2024-07-12 07:56:07,395 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.6 pTM=0.397 ipTM=0.15 tol=1.88
2024-07-12 07:56:11,580 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=64.2 pTM=0.404 ipTM=0.175 tol=1.66
2024-07-12 07:56:15,764 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=65.2 pTM=0.412 ipTM=0.207 tol=2.18
2024-07-12 07:56:19,957 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=64.2 pTM=0.406 ipTM=0.166 tol=2.51
2024-07-12 07:56:24,147 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=65 pTM=0.401 ipTM=0.16 tol=1.89
2024-07-12 07:56:28,337 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=64.1 pTM=0.403 ipTM=0.161 tol=2.02
2024-07-12 07:56:28,337 alphafold2_multimer_v3_model_1_seed_000 took 298.4s (30 recycles)
2024-07-12 07:56:32,669 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=65.3 pTM=0.45 ipTM=0.274
2024-07-12 07:56:36,865 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=64.6 pTM=0.387 ipTM=0.211 tol=6.93
2024-07-12 07:56:41,053 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=62.5 pTM=0.386 ipTM=0.131 tol=6.43
2024-07-12 07:56:45,244 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=64.5 pTM=0.387 ipTM=0.132 tol=4.91
2024-07-12 07:56:49,442 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=64.4 pTM=0.385 ipTM=0.133 tol=6.18
2024-07-12 07:56:53,639 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=64.5 pTM=0.391 ipTM=0.139 tol=3.74
2024-07-12 07:56:57,834 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=65.6 pTM=0.388 ipTM=0.132 tol=2.11
2024-07-12 07:57:02,029 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=64.4 pTM=0.386 ipTM=0.136 tol=4.93
2024-07-12 07:57:06,219 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=65.5 pTM=0.39 ipTM=0.138 tol=5.34
2024-07-12 07:57:10,410 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=64.7 pTM=0.388 ipTM=0.136 tol=3.3
2024-07-12 07:57:14,598 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=65.5 pTM=0.388 ipTM=0.135 tol=3.36
2024-07-12 07:57:18,794 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=64.9 pTM=0.39 ipTM=0.135 tol=2.18
2024-07-12 07:57:22,991 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=65.1 pTM=0.387 ipTM=0.134 tol=0.84
2024-07-12 07:57:27,185 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=65 pTM=0.389 ipTM=0.133 tol=2.08
2024-07-12 07:57:31,377 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=65.6 pTM=0.391 ipTM=0.139 tol=1.98
2024-07-12 07:57:35,568 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=65.7 pTM=0.393 ipTM=0.136 tol=3.66
2024-07-12 07:57:39,760 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=65.1 pTM=0.39 ipTM=0.139 tol=2.95
2024-07-12 07:57:43,953 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=66 pTM=0.393 ipTM=0.136 tol=3
2024-07-12 07:57:48,148 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64.7 pTM=0.389 ipTM=0.136 tol=3.16
2024-07-12 07:57:52,335 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=65.8 pTM=0.387 ipTM=0.136 tol=2.83
2024-07-12 07:57:56,524 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=65.3 pTM=0.393 ipTM=0.138 tol=1.7
2024-07-12 07:58:00,711 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=65.6 pTM=0.389 ipTM=0.137 tol=1.72
2024-07-12 07:58:04,898 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=64.7 pTM=0.388 ipTM=0.129 tol=1.21
2024-07-12 07:58:09,092 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=65.5 pTM=0.39 ipTM=0.138 tol=3.95
2024-07-12 07:58:13,288 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=65.2 pTM=0.391 ipTM=0.134 tol=3.17
2024-07-12 07:58:17,484 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=64.9 pTM=0.386 ipTM=0.135 tol=1.88
2024-07-12 07:58:21,680 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=64.9 pTM=0.389 ipTM=0.129 tol=1.92
2024-07-12 07:58:25,876 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=65.4 pTM=0.39 ipTM=0.137 tol=2.82
2024-07-12 07:58:30,076 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65.3 pTM=0.391 ipTM=0.134 tol=2.7
2024-07-12 07:58:34,276 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65.4 pTM=0.388 ipTM=0.133 tol=3.59
2024-07-12 07:58:38,473 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=64.7 pTM=0.385 ipTM=0.129 tol=2.8
2024-07-12 07:58:38,474 alphafold2_multimer_v3_model_2_seed_000 took 130.0s (30 recycles)
2024-07-12 07:58:42,823 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=60.1 pTM=0.375 ipTM=0.104
2024-07-12 07:58:47,019 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=61.8 pTM=0.387 ipTM=0.159 tol=18.6
2024-07-12 07:58:51,225 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=61.3 pTM=0.368 ipTM=0.122 tol=9.75
2024-07-12 07:58:55,425 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=61.8 pTM=0.357 ipTM=0.143 tol=4.65
2024-07-12 07:58:59,622 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=62 pTM=0.38 ipTM=0.163 tol=5.54
2024-07-12 07:59:03,826 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=61.8 pTM=0.369 ipTM=0.148 tol=9.01
2024-07-12 07:59:08,025 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=61.7 pTM=0.368 ipTM=0.141 tol=5.75
2024-07-12 07:59:12,219 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62 pTM=0.386 ipTM=0.168 tol=3.83
2024-07-12 07:59:16,416 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61.4 pTM=0.373 ipTM=0.15 tol=3.34
2024-07-12 07:59:20,607 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=63.2 pTM=0.403 ipTM=0.179 tol=4.82
2024-07-12 07:59:24,802 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=62.6 pTM=0.38 ipTM=0.152 tol=5.77
2024-07-12 07:59:29,003 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=62.8 pTM=0.401 ipTM=0.159 tol=7.17
2024-07-12 07:59:33,200 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=62.9 pTM=0.388 ipTM=0.132 tol=8.76
2024-07-12 07:59:37,404 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.9 pTM=0.409 ipTM=0.174 tol=9.51
2024-07-12 07:59:41,606 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=63.7 pTM=0.391 ipTM=0.145 tol=10.5
2024-07-12 07:59:45,801 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=63.5 pTM=0.424 ipTM=0.196 tol=2.09
2024-07-12 07:59:49,998 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=64.4 pTM=0.418 ipTM=0.161 tol=4.52
2024-07-12 07:59:54,190 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=63.3 pTM=0.427 ipTM=0.202 tol=1.31
2024-07-12 07:59:58,390 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=63.8 pTM=0.394 ipTM=0.139 tol=1.17
2024-07-12 08:00:02,578 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=63.5 pTM=0.413 ipTM=0.165 tol=1.35
2024-07-12 08:00:06,773 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=63.9 pTM=0.405 ipTM=0.147 tol=1.49
2024-07-12 08:00:10,958 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=63.2 pTM=0.415 ipTM=0.171 tol=1.45
2024-07-12 08:00:15,151 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=63.5 pTM=0.396 ipTM=0.13 tol=1.8
2024-07-12 08:00:19,342 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=63.2 pTM=0.415 ipTM=0.173 tol=2.79
2024-07-12 08:00:23,542 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=63.9 pTM=0.395 ipTM=0.129 tol=2.26
2024-07-12 08:00:27,736 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=63.2 pTM=0.415 ipTM=0.17 tol=2.88
2024-07-12 08:00:31,938 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=63.6 pTM=0.397 ipTM=0.133 tol=2.14
2024-07-12 08:00:36,127 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=63.3 pTM=0.428 ipTM=0.2 tol=1.73
2024-07-12 08:00:40,322 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=63.9 pTM=0.397 ipTM=0.136 tol=1.52
2024-07-12 08:00:44,514 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=62.8 pTM=0.402 ipTM=0.141 tol=1.52
2024-07-12 08:00:48,701 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=63 pTM=0.391 ipTM=0.136 tol=1.63
2024-07-12 08:00:48,702 alphafold2_multimer_v3_model_3_seed_000 took 130.1s (30 recycles)
2024-07-12 08:00:53,023 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=61.2 pTM=0.405 ipTM=0.241
2024-07-12 08:00:57,210 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=60.7 pTM=0.395 ipTM=0.147 tol=10.6
2024-07-12 08:01:01,403 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=59 pTM=0.361 ipTM=0.136 tol=5.05
2024-07-12 08:01:05,587 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=59.3 pTM=0.367 ipTM=0.155 tol=5.79
2024-07-12 08:01:09,781 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=59.9 pTM=0.369 ipTM=0.136 tol=3.91
2024-07-12 08:01:13,968 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=58.8 pTM=0.366 ipTM=0.138 tol=3.41
2024-07-12 08:01:18,158 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=59.9 pTM=0.37 ipTM=0.151 tol=3.74
2024-07-12 08:01:22,350 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=58.5 pTM=0.361 ipTM=0.137 tol=3.96
2024-07-12 08:01:26,537 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=59.4 pTM=0.378 ipTM=0.147 tol=2.79
2024-07-12 08:01:30,727 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=57.7 pTM=0.36 ipTM=0.139 tol=2.75
2024-07-12 08:01:34,918 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=58.8 pTM=0.371 ipTM=0.146 tol=3.05
2024-07-12 08:01:39,118 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=58.4 pTM=0.362 ipTM=0.136 tol=3.11
2024-07-12 08:01:43,309 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=59.1 pTM=0.379 ipTM=0.143 tol=1.99
2024-07-12 08:01:47,506 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=58.5 pTM=0.364 ipTM=0.144 tol=3.18
2024-07-12 08:01:51,697 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=58.6 pTM=0.372 ipTM=0.149 tol=3.71
2024-07-12 08:01:55,887 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=58.6 pTM=0.364 ipTM=0.141 tol=2.79
2024-07-12 08:02:00,075 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=59 pTM=0.381 ipTM=0.15 tol=3.13
2024-07-12 08:02:04,269 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=58.8 pTM=0.364 ipTM=0.145 tol=3.13
2024-07-12 08:02:08,459 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=59 pTM=0.378 ipTM=0.147 tol=2.48
2024-07-12 08:02:12,651 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=58.3 pTM=0.367 ipTM=0.149 tol=4.17
2024-07-12 08:02:16,844 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=58.6 pTM=0.375 ipTM=0.147 tol=3.49
2024-07-12 08:02:21,040 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=58.4 pTM=0.369 ipTM=0.149 tol=2.22
2024-07-12 08:02:25,225 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=59.2 pTM=0.382 ipTM=0.147 tol=2.3
2024-07-12 08:02:29,422 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=59.2 pTM=0.365 ipTM=0.146 tol=4.93
2024-07-12 08:02:33,613 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=58.6 pTM=0.365 ipTM=0.142 tol=3.51
2024-07-12 08:02:37,808 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=58.7 pTM=0.364 ipTM=0.14 tol=2.62
2024-07-12 08:02:41,999 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=59.1 pTM=0.374 ipTM=0.137 tol=2.06
2024-07-12 08:02:46,188 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=58 pTM=0.359 ipTM=0.137 tol=3.09
2024-07-12 08:02:50,386 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=59.8 pTM=0.381 ipTM=0.143 tol=3.88
2024-07-12 08:02:54,587 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=59 pTM=0.361 ipTM=0.139 tol=2.82
2024-07-12 08:02:58,779 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=58.7 pTM=0.374 ipTM=0.148 tol=4.02
2024-07-12 08:02:58,779 alphafold2_multimer_v3_model_4_seed_000 took 129.9s (30 recycles)
2024-07-12 08:03:03,110 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=63 pTM=0.497 ipTM=0.378
2024-07-12 08:03:07,305 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=61.3 pTM=0.419 ipTM=0.202 tol=11.7
2024-07-12 08:03:11,491 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=61.6 pTM=0.396 ipTM=0.176 tol=5.71
2024-07-12 08:03:15,681 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=59.2 pTM=0.358 ipTM=0.137 tol=5.91
2024-07-12 08:03:19,874 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=60.4 pTM=0.374 ipTM=0.159 tol=8.18
2024-07-12 08:03:24,060 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=59.5 pTM=0.374 ipTM=0.138 tol=6.26
2024-07-12 08:03:28,257 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=60 pTM=0.358 ipTM=0.134 tol=4.38
2024-07-12 08:03:32,444 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=59.2 pTM=0.377 ipTM=0.152 tol=6.46
2024-07-12 08:03:36,632 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=60.1 pTM=0.391 ipTM=0.215 tol=7.76
2024-07-12 08:03:40,825 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=59.8 pTM=0.377 ipTM=0.146 tol=5.35
2024-07-12 08:03:45,013 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=59.9 pTM=0.397 ipTM=0.243 tol=3.55
2024-07-12 08:03:49,210 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=60.6 pTM=0.369 ipTM=0.141 tol=7.1
2024-07-12 08:03:53,404 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=60.5 pTM=0.383 ipTM=0.166 tol=4.1
2024-07-12 08:03:57,600 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=59.4 pTM=0.368 ipTM=0.149 tol=5.26
2024-07-12 08:04:01,787 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=61.4 pTM=0.422 ipTM=0.277 tol=3.73
2024-07-12 08:04:05,976 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=59.8 pTM=0.362 ipTM=0.139 tol=5.24
2024-07-12 08:04:10,165 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=61.7 pTM=0.424 ipTM=0.308 tol=4.89
2024-07-12 08:04:14,361 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=59.8 pTM=0.38 ipTM=0.159 tol=8.63
2024-07-12 08:04:18,553 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.4 pTM=0.445 ipTM=0.338 tol=5.85
2024-07-12 08:04:22,746 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=60 pTM=0.374 ipTM=0.159 tol=4.41
2024-07-12 08:04:26,933 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61.6 pTM=0.439 ipTM=0.319 tol=6.32
2024-07-12 08:04:31,123 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=59.5 pTM=0.364 ipTM=0.14 tol=6.89
2024-07-12 08:04:35,315 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61.1 pTM=0.409 ipTM=0.25 tol=8.7
2024-07-12 08:04:39,507 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=60.1 pTM=0.361 ipTM=0.134 tol=8.73
2024-07-12 08:04:43,696 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61.1 pTM=0.402 ipTM=0.224 tol=4.45
2024-07-12 08:04:47,888 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=58.8 pTM=0.365 ipTM=0.146 tol=7.63
2024-07-12 08:04:52,066 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=59.6 pTM=0.395 ipTM=0.215 tol=6.31
2024-07-12 08:04:56,256 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=59.4 pTM=0.367 ipTM=0.143 tol=5.32
2024-07-12 08:05:00,448 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=60.2 pTM=0.401 ipTM=0.213 tol=7.98
2024-07-12 08:05:04,641 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=59.3 pTM=0.36 ipTM=0.134 tol=6.44
2024-07-12 08:05:08,823 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=59.8 pTM=0.387 ipTM=0.171 tol=3.41
2024-07-12 08:05:08,823 alphafold2_multimer_v3_model_5_seed_000 took 129.9s (30 recycles)
2024-07-12 08:05:08,951 reranking models by 'multimer' metric
2024-07-12 08:05:19,482 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 08:05:58,562 Relaxation took 49.6s
2024-07-12 08:05:58,563 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=59.8 pTM=0.387 ipTM=0.171
2024-07-12 08:06:12,773 Relaxation took 14.2s
2024-07-12 08:06:12,773 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=64.1 pTM=0.403 ipTM=0.161
2024-07-12 08:06:40,436 Relaxation took 27.7s
2024-07-12 08:06:40,436 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=58.7 pTM=0.374 ipTM=0.148
2024-07-12 08:07:03,141 Relaxation took 22.7s
2024-07-12 08:07:03,141 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=63 pTM=0.391 ipTM=0.136
2024-07-12 08:07:13,070 Relaxation took 9.9s
2024-07-12 08:07:13,070 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=64.7 pTM=0.385 ipTM=0.129
2024-07-12 08:07:14,041 Done