2024-07-12 07:50:43,621 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 07:50:43,921 Running on GPU
2024-07-12 07:50:49,674 Found 6 citations for tools or databases
2024-07-12 07:50:49,675 Query 1/1: PITX2_DPS1 (length 732)
2024-07-12 07:50:50,169 Sleeping for 9s. Reason: PENDING
2024-07-12 07:50:59,614 Sleeping for 9s. Reason: RUNNING
2024-07-12 07:51:09,061 Sleeping for 8s. Reason: RUNNING
2024-07-12 07:51:17,502 Sleeping for 7s. Reason: RUNNING
2024-07-12 07:51:24,942 Sleeping for 5s. Reason: RUNNING
2024-07-12 07:51:30,389 Sleeping for 8s. Reason: RUNNING
2024-07-12 07:51:38,811 Sleeping for 8s. Reason: RUNNING
2024-07-12 07:51:47,237 Sleeping for 8s. Reason: RUNNING
2024-07-12 07:51:55,682 Sleeping for 8s. Reason: RUNNING
2024-07-12 07:52:04,146 Sleeping for 8s. Reason: RUNNING
2024-07-12 07:52:12,584 Sleeping for 6s. Reason: RUNNING
2024-07-12 07:52:19,009 Sleeping for 8s. Reason: RUNNING
2024-07-12 07:52:33,920 Sleeping for 8s. Reason: PENDING
2024-07-12 07:52:42,338 Sleeping for 9s. Reason: RUNNING
2024-07-12 07:52:51,766 Sleeping for 7s. Reason: RUNNING
2024-07-12 07:52:59,224 Sleeping for 7s. Reason: RUNNING
2024-07-12 07:53:06,649 Sleeping for 10s. Reason: RUNNING
2024-07-12 07:53:17,118 Sleeping for 6s. Reason: RUNNING
2024-07-12 07:53:23,541 Sleeping for 10s. Reason: RUNNING
2024-07-12 07:53:37,450 Setting max_seq=508, max_extra_seq=2048
2024-07-12 07:56:49,176 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=54.7 pTM=0.494 ipTM=0.152
2024-07-12 07:57:00,009 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=54.9 pTM=0.496 ipTM=0.142 tol=11.1
2024-07-12 07:57:10,858 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=54.9 pTM=0.495 ipTM=0.142 tol=5.09
2024-07-12 07:57:21,715 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=54.8 pTM=0.495 ipTM=0.142 tol=3.29
2024-07-12 07:57:32,607 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=55 pTM=0.496 ipTM=0.15 tol=3.11
2024-07-12 07:57:43,504 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=55 pTM=0.498 ipTM=0.16 tol=3.05
2024-07-12 07:57:54,395 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=55.2 pTM=0.501 ipTM=0.183 tol=2.62
2024-07-12 07:58:05,302 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=55 pTM=0.5 ipTM=0.168 tol=2.1
2024-07-12 07:58:16,215 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=55 pTM=0.501 ipTM=0.166 tol=5.98
2024-07-12 07:58:27,125 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=54.9 pTM=0.502 ipTM=0.168 tol=5.64
2024-07-12 07:58:38,054 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=55.2 pTM=0.503 ipTM=0.173 tol=2.73
2024-07-12 07:58:48,983 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=55.1 pTM=0.503 ipTM=0.173 tol=2.36
2024-07-12 07:58:59,913 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=55.2 pTM=0.5 ipTM=0.158 tol=3
2024-07-12 07:59:10,848 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=55.2 pTM=0.501 ipTM=0.162 tol=2.83
2024-07-12 07:59:21,789 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=55.2 pTM=0.5 ipTM=0.16 tol=3.33
2024-07-12 07:59:32,736 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=55.3 pTM=0.5 ipTM=0.163 tol=6.55
2024-07-12 07:59:43,688 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=55.4 pTM=0.501 ipTM=0.184 tol=3.29
2024-07-12 07:59:54,637 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=55.2 pTM=0.501 ipTM=0.182 tol=3.12
2024-07-12 08:00:05,582 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=55.2 pTM=0.501 ipTM=0.188 tol=4.86
2024-07-12 08:00:16,528 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=55 pTM=0.5 ipTM=0.191 tol=1.58
2024-07-12 08:00:27,481 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=55.2 pTM=0.501 ipTM=0.181 tol=4.6
2024-07-12 08:00:38,435 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=55.3 pTM=0.5 ipTM=0.186 tol=1.86
2024-07-12 08:00:49,392 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=55.2 pTM=0.501 ipTM=0.196 tol=4.25
2024-07-12 08:01:00,353 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=55.2 pTM=0.5 ipTM=0.19 tol=4.55
2024-07-12 08:01:11,308 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=55.2 pTM=0.501 ipTM=0.182 tol=4.37
2024-07-12 08:01:22,272 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=55.2 pTM=0.5 ipTM=0.173 tol=3.61
2024-07-12 08:01:33,233 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=55.3 pTM=0.501 ipTM=0.168 tol=3.47
2024-07-12 08:01:44,190 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=55.2 pTM=0.501 ipTM=0.18 tol=2.5
2024-07-12 08:01:55,170 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=55.1 pTM=0.501 ipTM=0.178 tol=4.22
2024-07-12 08:02:06,134 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=55 pTM=0.501 ipTM=0.177 tol=5
2024-07-12 08:02:17,091 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=55.3 pTM=0.5 ipTM=0.173 tol=4.85
2024-07-12 08:02:17,091 alphafold2_multimer_v3_model_1_seed_000 took 462.3s (30 recycles)
2024-07-12 08:02:29,182 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=55.8 pTM=0.487 ipTM=0.126
2024-07-12 08:02:40,175 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=55.4 pTM=0.496 ipTM=0.15 tol=11.1
2024-07-12 08:02:51,186 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=55.3 pTM=0.493 ipTM=0.145 tol=7.21
2024-07-12 08:03:02,193 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=55 pTM=0.491 ipTM=0.149 tol=7.59
2024-07-12 08:03:13,202 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=55 pTM=0.491 ipTM=0.15 tol=4.62
2024-07-12 08:03:24,205 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=54.9 pTM=0.49 ipTM=0.144 tol=3.16
2024-07-12 08:03:35,215 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=55 pTM=0.491 ipTM=0.147 tol=2.89
2024-07-12 08:03:46,215 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=55.1 pTM=0.49 ipTM=0.149 tol=2.82
2024-07-12 08:03:57,227 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=55.1 pTM=0.49 ipTM=0.148 tol=3.89
2024-07-12 08:04:08,230 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=55.1 pTM=0.489 ipTM=0.145 tol=2.95
2024-07-12 08:04:19,239 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=55.1 pTM=0.49 ipTM=0.147 tol=3.01
2024-07-12 08:04:30,243 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=55 pTM=0.49 ipTM=0.148 tol=4.93
2024-07-12 08:04:41,259 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=55.1 pTM=0.489 ipTM=0.148 tol=3.91
2024-07-12 08:04:52,275 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=55.2 pTM=0.49 ipTM=0.145 tol=3.35
2024-07-12 08:05:03,268 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=55 pTM=0.49 ipTM=0.147 tol=2.14
2024-07-12 08:05:14,271 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=55.1 pTM=0.49 ipTM=0.145 tol=3.11
2024-07-12 08:05:25,278 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=55.1 pTM=0.489 ipTM=0.143 tol=3.1
2024-07-12 08:05:36,275 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=55.3 pTM=0.49 ipTM=0.143 tol=2.35
2024-07-12 08:05:47,286 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=55.2 pTM=0.491 ipTM=0.144 tol=2.09
2024-07-12 08:05:58,298 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=55.1 pTM=0.491 ipTM=0.151 tol=2.81
2024-07-12 08:06:09,319 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=55 pTM=0.49 ipTM=0.15 tol=4.33
2024-07-12 08:06:20,325 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=55.2 pTM=0.49 ipTM=0.151 tol=4.1
2024-07-12 08:06:31,315 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=55 pTM=0.489 ipTM=0.149 tol=2.33
2024-07-12 08:06:42,316 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=55 pTM=0.49 ipTM=0.147 tol=2.85
2024-07-12 08:06:53,314 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=54.9 pTM=0.49 ipTM=0.154 tol=3.09
2024-07-12 08:07:04,310 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=54.8 pTM=0.49 ipTM=0.153 tol=2.73
2024-07-12 08:07:15,312 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=54.8 pTM=0.49 ipTM=0.151 tol=2.33
2024-07-12 08:07:26,312 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=54.8 pTM=0.49 ipTM=0.153 tol=1.86
2024-07-12 08:07:37,302 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=54.7 pTM=0.49 ipTM=0.157 tol=2.06
2024-07-12 08:07:48,282 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=54.6 pTM=0.49 ipTM=0.148 tol=2.76
2024-07-12 08:07:59,277 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=54.7 pTM=0.489 ipTM=0.146 tol=3.75
2024-07-12 08:07:59,277 alphafold2_multimer_v3_model_2_seed_000 took 341.1s (30 recycles)
2024-07-12 08:08:10,681 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=54.2 pTM=0.49 ipTM=0.15
2024-07-12 08:08:21,718 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=54.5 pTM=0.507 ipTM=0.246 tol=13.6
2024-07-12 08:08:32,759 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=54.7 pTM=0.503 ipTM=0.229 tol=5.34
2024-07-12 08:08:43,794 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=54.8 pTM=0.501 ipTM=0.172 tol=4.3
2024-07-12 08:08:54,827 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=54.9 pTM=0.506 ipTM=0.191 tol=2.77
2024-07-12 08:09:05,863 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=55 pTM=0.505 ipTM=0.177 tol=2.52
2024-07-12 08:09:16,893 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=54.9 pTM=0.505 ipTM=0.177 tol=4.78
2024-07-12 08:09:27,923 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=54.9 pTM=0.506 ipTM=0.184 tol=5.64
2024-07-12 08:09:38,941 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=54.8 pTM=0.506 ipTM=0.167 tol=2.84
2024-07-12 08:09:49,948 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=54.6 pTM=0.504 ipTM=0.164 tol=1.72
2024-07-12 08:10:00,966 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=54.8 pTM=0.507 ipTM=0.167 tol=2.74
2024-07-12 08:10:11,972 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=54.4 pTM=0.505 ipTM=0.167 tol=2.52
2024-07-12 08:10:22,989 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=54.6 pTM=0.503 ipTM=0.175 tol=2.35
2024-07-12 08:10:34,001 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=54.5 pTM=0.503 ipTM=0.164 tol=3.82
2024-07-12 08:10:45,024 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=54.7 pTM=0.503 ipTM=0.18 tol=5.36
2024-07-12 08:10:56,038 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=54.7 pTM=0.503 ipTM=0.186 tol=3.52
2024-07-12 08:11:07,063 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=54.7 pTM=0.504 ipTM=0.19 tol=3.58
2024-07-12 08:11:18,090 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=54.8 pTM=0.506 ipTM=0.229 tol=3.48
2024-07-12 08:11:29,120 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=54.7 pTM=0.505 ipTM=0.202 tol=2.48
2024-07-12 08:11:40,145 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=54.5 pTM=0.507 ipTM=0.196 tol=4.49
2024-07-12 08:11:51,158 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=54.4 pTM=0.506 ipTM=0.191 tol=1.74
2024-07-12 08:12:02,171 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=54.4 pTM=0.504 ipTM=0.222 tol=1.46
2024-07-12 08:12:13,193 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=54.3 pTM=0.504 ipTM=0.2 tol=2.91
2024-07-12 08:12:24,210 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=54.5 pTM=0.504 ipTM=0.206 tol=1.76
2024-07-12 08:12:35,226 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=54.3 pTM=0.505 ipTM=0.212 tol=1.93
2024-07-12 08:12:46,246 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54.5 pTM=0.505 ipTM=0.2 tol=4.28
2024-07-12 08:12:57,263 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=54.4 pTM=0.504 ipTM=0.172 tol=4.29
2024-07-12 08:13:08,284 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=54.4 pTM=0.504 ipTM=0.174 tol=2.7
2024-07-12 08:13:19,301 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=54.5 pTM=0.505 ipTM=0.181 tol=2.24
2024-07-12 08:13:30,325 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=54.5 pTM=0.509 ipTM=0.215 tol=2.49
2024-07-12 08:13:41,340 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=54.7 pTM=0.51 ipTM=0.242 tol=2.1
2024-07-12 08:13:41,341 alphafold2_multimer_v3_model_3_seed_000 took 341.7s (30 recycles)
2024-07-12 08:13:52,751 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=54.8 pTM=0.485 ipTM=0.189
2024-07-12 08:14:03,800 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=54.3 pTM=0.497 ipTM=0.177 tol=11.8
2024-07-12 08:14:14,827 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=54.2 pTM=0.492 ipTM=0.168 tol=5.08
2024-07-12 08:14:25,842 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=53.8 pTM=0.492 ipTM=0.165 tol=3.38
2024-07-12 08:14:36,862 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=54 pTM=0.496 ipTM=0.173 tol=3.7
2024-07-12 08:14:47,877 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=54.1 pTM=0.498 ipTM=0.177 tol=3.1
2024-07-12 08:14:58,887 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=54 pTM=0.497 ipTM=0.163 tol=3.63
2024-07-12 08:15:09,888 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=53.9 pTM=0.495 ipTM=0.156 tol=5.17
2024-07-12 08:15:20,881 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=53.8 pTM=0.497 ipTM=0.164 tol=3.51
2024-07-12 08:15:31,860 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=53.8 pTM=0.495 ipTM=0.157 tol=3.33
2024-07-12 08:15:42,873 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=54 pTM=0.494 ipTM=0.154 tol=2.38
2024-07-12 08:15:53,878 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=53.7 pTM=0.496 ipTM=0.152 tol=3.06
2024-07-12 08:16:04,890 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=53.8 pTM=0.493 ipTM=0.154 tol=2.5
2024-07-12 08:16:15,899 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=53.8 pTM=0.495 ipTM=0.155 tol=2.34
2024-07-12 08:16:26,908 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=53.8 pTM=0.492 ipTM=0.153 tol=3.24
2024-07-12 08:16:37,918 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=53.8 pTM=0.492 ipTM=0.152 tol=4.45
2024-07-12 08:16:48,940 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=53.8 pTM=0.494 ipTM=0.151 tol=2.31
2024-07-12 08:16:59,949 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=53.5 pTM=0.492 ipTM=0.15 tol=3.07
2024-07-12 08:17:10,946 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=53.7 pTM=0.494 ipTM=0.151 tol=1.96
2024-07-12 08:17:21,979 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=53.8 pTM=0.494 ipTM=0.158 tol=2.24
2024-07-12 08:17:32,974 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=53.6 pTM=0.492 ipTM=0.155 tol=2.29
2024-07-12 08:17:43,966 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=53.7 pTM=0.492 ipTM=0.155 tol=1.89
2024-07-12 08:17:54,977 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=53.7 pTM=0.495 ipTM=0.159 tol=3.55
2024-07-12 08:18:05,975 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=53.6 pTM=0.494 ipTM=0.152 tol=3.03
2024-07-12 08:18:16,986 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=53.7 pTM=0.496 ipTM=0.167 tol=2.16
2024-07-12 08:18:27,994 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=53.6 pTM=0.495 ipTM=0.165 tol=2.11
2024-07-12 08:18:39,001 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=53.8 pTM=0.496 ipTM=0.17 tol=3.12
2024-07-12 08:18:50,020 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=53.5 pTM=0.495 ipTM=0.176 tol=3.03
2024-07-12 08:19:01,043 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=53.7 pTM=0.496 ipTM=0.169 tol=2.29
2024-07-12 08:19:12,061 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=53.6 pTM=0.494 ipTM=0.166 tol=2.32
2024-07-12 08:19:23,082 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=53.8 pTM=0.493 ipTM=0.162 tol=4.01
2024-07-12 08:19:23,083 alphafold2_multimer_v3_model_4_seed_000 took 341.4s (30 recycles)
2024-07-12 08:19:34,485 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=55.3 pTM=0.484 ipTM=0.182
2024-07-12 08:19:45,522 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=54.7 pTM=0.487 ipTM=0.156 tol=9.38
2024-07-12 08:19:56,542 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=54.6 pTM=0.487 ipTM=0.143 tol=6.39
2024-07-12 08:20:07,568 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=54.7 pTM=0.489 ipTM=0.144 tol=5.07
2024-07-12 08:20:18,577 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=54.5 pTM=0.489 ipTM=0.14 tol=5.79
2024-07-12 08:20:29,595 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=54.6 pTM=0.489 ipTM=0.145 tol=2.46
2024-07-12 08:20:40,608 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=54.5 pTM=0.489 ipTM=0.145 tol=2.25
2024-07-12 08:20:51,622 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=54.4 pTM=0.489 ipTM=0.153 tol=3.25
2024-07-12 08:21:02,649 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=54.5 pTM=0.49 ipTM=0.149 tol=3.12
2024-07-12 08:21:13,662 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=54.2 pTM=0.488 ipTM=0.149 tol=3.1
2024-07-12 08:21:24,684 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=54.5 pTM=0.489 ipTM=0.156 tol=2.68
2024-07-12 08:21:35,732 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=54 pTM=0.489 ipTM=0.154 tol=1.81
2024-07-12 08:21:46,764 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=54.6 pTM=0.49 ipTM=0.146 tol=1.79
2024-07-12 08:21:57,795 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=54.4 pTM=0.489 ipTM=0.151 tol=3.72
2024-07-12 08:22:08,847 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=54.6 pTM=0.489 ipTM=0.14 tol=4.14
2024-07-12 08:22:19,871 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=54.5 pTM=0.49 ipTM=0.156 tol=2.44
2024-07-12 08:22:30,904 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=54.5 pTM=0.489 ipTM=0.156 tol=1.87
2024-07-12 08:22:41,935 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=54.4 pTM=0.489 ipTM=0.155 tol=5.37
2024-07-12 08:22:52,956 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=54.6 pTM=0.49 ipTM=0.159 tol=2.56
2024-07-12 08:23:03,990 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=54.3 pTM=0.489 ipTM=0.165 tol=2.33
2024-07-12 08:23:15,019 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=54.5 pTM=0.49 ipTM=0.173 tol=2.06
2024-07-12 08:23:26,045 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=54.5 pTM=0.49 ipTM=0.163 tol=6.14
2024-07-12 08:23:37,065 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=54.4 pTM=0.492 ipTM=0.178 tol=3.21
2024-07-12 08:23:48,082 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=54.4 pTM=0.49 ipTM=0.18 tol=5.74
2024-07-12 08:23:59,110 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=54.5 pTM=0.491 ipTM=0.173 tol=5
2024-07-12 08:24:10,139 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=54.3 pTM=0.49 ipTM=0.164 tol=5.68
2024-07-12 08:24:21,162 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=54.6 pTM=0.49 ipTM=0.161 tol=5.39
2024-07-12 08:24:32,208 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=54.3 pTM=0.489 ipTM=0.161 tol=7.33
2024-07-12 08:24:43,226 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=54.5 pTM=0.49 ipTM=0.157 tol=7.28
2024-07-12 08:24:54,240 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=54.4 pTM=0.491 ipTM=0.152 tol=2.4
2024-07-12 08:25:05,321 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=54.6 pTM=0.49 ipTM=0.158 tol=6.33
2024-07-12 08:25:05,322 alphafold2_multimer_v3_model_5_seed_000 took 341.9s (30 recycles)
2024-07-12 08:25:05,663 reranking models by 'multimer' metric
2024-07-12 08:25:06,616 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 08:26:04,261 Relaxation took 58.6s
2024-07-12 08:26:04,261 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=54.7 pTM=0.51 ipTM=0.242
2024-07-12 08:26:53,980 Relaxation took 49.7s
2024-07-12 08:26:53,980 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=55.3 pTM=0.5 ipTM=0.173
2024-07-12 08:27:39,853 Relaxation took 45.9s
2024-07-12 08:27:39,853 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=53.8 pTM=0.493 ipTM=0.162
2024-07-12 08:28:37,766 Relaxation took 57.9s
2024-07-12 08:28:37,766 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=54.6 pTM=0.49 ipTM=0.158
2024-07-12 08:29:56,657 Relaxation took 78.9s
2024-07-12 08:29:56,657 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=54.7 pTM=0.489 ipTM=0.146
2024-07-12 08:30:00,423 Done