2024-07-12 08:02:13,020 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 08:02:13,347 Running on GPU
2024-07-12 08:02:29,607 Found 6 citations for tools or databases
2024-07-12 08:02:29,607 Query 1/1: PKHB2_TMG3 (length 453)
2024-07-12 08:02:30,057 Sleeping for 9s. Reason: PENDING
2024-07-12 08:02:39,480 Sleeping for 7s. Reason: RUNNING
2024-07-12 08:02:46,896 Sleeping for 9s. Reason: RUNNING
2024-07-12 08:02:56,310 Sleeping for 9s. Reason: RUNNING
2024-07-12 08:03:05,750 Sleeping for 6s. Reason: RUNNING
2024-07-12 08:03:13,522 Sleeping for 6s. Reason: PENDING
2024-07-12 08:03:19,981 Sleeping for 6s. Reason: RUNNING
2024-07-12 08:03:26,413 Sleeping for 8s. Reason: RUNNING
2024-07-12 08:03:34,833 Sleeping for 8s. Reason: RUNNING
2024-07-12 08:03:44,735 Setting max_seq=508, max_extra_seq=2048
2024-07-12 08:07:51,164 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=47.8 pTM=0.346 ipTM=0.254
2024-07-12 08:07:55,815 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=47.9 pTM=0.341 ipTM=0.208 tol=7.16
2024-07-12 08:08:00,471 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=48.4 pTM=0.34 ipTM=0.206 tol=9.77
2024-07-12 08:08:05,134 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=48.9 pTM=0.34 ipTM=0.247 tol=7.73
2024-07-12 08:08:09,794 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=50.5 pTM=0.374 ipTM=0.41 tol=8.74
2024-07-12 08:08:14,448 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=51.1 pTM=0.382 ipTM=0.438 tol=6.2
2024-07-12 08:08:19,108 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=51.7 pTM=0.386 ipTM=0.44 tol=2.34
2024-07-12 08:08:23,767 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=52.5 pTM=0.393 ipTM=0.458 tol=1.55
2024-07-12 08:08:28,430 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=53.2 pTM=0.396 ipTM=0.466 tol=4.38
2024-07-12 08:08:33,092 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=53.5 pTM=0.396 ipTM=0.47 tol=1.87
2024-07-12 08:08:37,762 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=53.1 pTM=0.399 ipTM=0.474 tol=4.11
2024-07-12 08:08:42,427 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=53.7 pTM=0.4 ipTM=0.479 tol=4.07
2024-07-12 08:08:47,090 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=53.6 pTM=0.401 ipTM=0.479 tol=2.34
2024-07-12 08:08:51,756 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=53.1 pTM=0.399 ipTM=0.48 tol=3.14
2024-07-12 08:08:56,427 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=53.2 pTM=0.4 ipTM=0.482 tol=1.97
2024-07-12 08:09:01,098 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=53.8 pTM=0.402 ipTM=0.484 tol=4.3
2024-07-12 08:09:05,772 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=53.4 pTM=0.402 ipTM=0.486 tol=4.18
2024-07-12 08:09:10,446 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=52.9 pTM=0.401 ipTM=0.485 tol=5.16
2024-07-12 08:09:15,121 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=53.7 pTM=0.403 ipTM=0.487 tol=5.7
2024-07-12 08:09:19,793 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=53.8 pTM=0.403 ipTM=0.488 tol=3.72
2024-07-12 08:09:24,469 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=53.3 pTM=0.402 ipTM=0.486 tol=4.6
2024-07-12 08:09:29,143 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=53.2 pTM=0.403 ipTM=0.487 tol=2.21
2024-07-12 08:09:33,821 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=53.1 pTM=0.402 ipTM=0.486 tol=1.09
2024-07-12 08:09:38,493 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=53 pTM=0.4 ipTM=0.485 tol=1.37
2024-07-12 08:09:43,172 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=52.9 pTM=0.4 ipTM=0.483 tol=6.14
2024-07-12 08:09:47,847 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=53.1 pTM=0.402 ipTM=0.487 tol=2.11
2024-07-12 08:09:52,532 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=53.7 pTM=0.402 ipTM=0.49 tol=8.28
2024-07-12 08:09:57,210 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=53.7 pTM=0.402 ipTM=0.487 tol=3.81
2024-07-12 08:10:01,892 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=53.3 pTM=0.402 ipTM=0.485 tol=4.73
2024-07-12 08:10:06,571 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=53.2 pTM=0.401 ipTM=0.485 tol=1.97
2024-07-12 08:10:11,252 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=53.7 pTM=0.402 ipTM=0.485 tol=5
2024-07-12 08:10:11,252 alphafold2_multimer_v3_model_1_seed_000 took 309.4s (30 recycles)
2024-07-12 08:10:16,056 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=46.3 pTM=0.348 ipTM=0.243
2024-07-12 08:10:20,715 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=46.9 pTM=0.337 ipTM=0.16 tol=6.82
2024-07-12 08:10:25,381 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=46.8 pTM=0.335 ipTM=0.155 tol=8.94
2024-07-12 08:10:30,042 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=47.2 pTM=0.34 ipTM=0.159 tol=6.98
2024-07-12 08:10:34,719 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=48.2 pTM=0.35 ipTM=0.274 tol=7.78
2024-07-12 08:10:39,389 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=48 pTM=0.344 ipTM=0.238 tol=8.52
2024-07-12 08:10:44,066 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=47.5 pTM=0.339 ipTM=0.207 tol=4.2
2024-07-12 08:10:48,736 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=47.2 pTM=0.337 ipTM=0.175 tol=4.87
2024-07-12 08:10:53,416 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=48.7 pTM=0.357 ipTM=0.329 tol=11.5
2024-07-12 08:10:58,091 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=48 pTM=0.349 ipTM=0.274 tol=6.94
2024-07-12 08:11:02,771 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=47.8 pTM=0.345 ipTM=0.234 tol=6.45
2024-07-12 08:11:07,447 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=48 pTM=0.347 ipTM=0.26 tol=5.53
2024-07-12 08:11:12,123 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=48 pTM=0.345 ipTM=0.247 tol=11.8
2024-07-12 08:11:16,795 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=47.9 pTM=0.344 ipTM=0.238 tol=5.53
2024-07-12 08:11:21,469 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=47.9 pTM=0.343 ipTM=0.225 tol=3.05
2024-07-12 08:11:26,144 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=48.5 pTM=0.354 ipTM=0.286 tol=3.73
2024-07-12 08:11:30,820 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=48.3 pTM=0.347 ipTM=0.243 tol=1.82
2024-07-12 08:11:35,494 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=48.5 pTM=0.354 ipTM=0.281 tol=2.75
2024-07-12 08:11:40,172 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=48.2 pTM=0.341 ipTM=0.199 tol=3.24
2024-07-12 08:11:44,850 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=48 pTM=0.344 ipTM=0.226 tol=4.11
2024-07-12 08:11:49,526 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=48.3 pTM=0.349 ipTM=0.279 tol=3.51
2024-07-12 08:11:54,205 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=48.5 pTM=0.348 ipTM=0.247 tol=4.38
2024-07-12 08:11:58,882 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=48.1 pTM=0.345 ipTM=0.24 tol=3.61
2024-07-12 08:12:03,556 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=48 pTM=0.345 ipTM=0.237 tol=2.88
2024-07-12 08:12:08,235 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=48.2 pTM=0.347 ipTM=0.262 tol=5.08
2024-07-12 08:12:12,916 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=48.4 pTM=0.347 ipTM=0.243 tol=5.34
2024-07-12 08:12:17,595 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=48.6 pTM=0.348 ipTM=0.251 tol=2.41
2024-07-12 08:12:22,269 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=48.7 pTM=0.35 ipTM=0.271 tol=3.38
2024-07-12 08:12:26,944 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=48.7 pTM=0.347 ipTM=0.239 tol=5.34
2024-07-12 08:12:31,616 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=48.9 pTM=0.353 ipTM=0.288 tol=5.8
2024-07-12 08:12:36,290 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=49.1 pTM=0.35 ipTM=0.263 tol=4.29
2024-07-12 08:12:36,290 alphafold2_multimer_v3_model_2_seed_000 took 144.9s (30 recycles)
2024-07-12 08:12:41,131 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=44.7 pTM=0.357 ipTM=0.301
2024-07-12 08:12:45,843 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=45.3 pTM=0.331 ipTM=0.159 tol=14.9
2024-07-12 08:12:50,559 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=45.2 pTM=0.336 ipTM=0.189 tol=13.4
2024-07-12 08:12:55,276 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=44.8 pTM=0.332 ipTM=0.177 tol=12.8
2024-07-12 08:12:59,991 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=45.5 pTM=0.342 ipTM=0.168 tol=13.1
2024-07-12 08:13:04,710 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=45.5 pTM=0.339 ipTM=0.204 tol=12
2024-07-12 08:13:09,430 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=47.5 pTM=0.364 ipTM=0.305 tol=7.31
2024-07-12 08:13:14,142 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=47.5 pTM=0.36 ipTM=0.309 tol=8.71
2024-07-12 08:13:18,857 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=48.8 pTM=0.381 ipTM=0.41 tol=6.62
2024-07-12 08:13:23,567 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=48.7 pTM=0.378 ipTM=0.405 tol=2.27
2024-07-12 08:13:28,277 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=49.1 pTM=0.385 ipTM=0.435 tol=4.18
2024-07-12 08:13:32,985 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=49.3 pTM=0.387 ipTM=0.451 tol=5.8
2024-07-12 08:13:37,693 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=49.4 pTM=0.39 ipTM=0.462 tol=4.79
2024-07-12 08:13:42,401 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=49.4 pTM=0.391 ipTM=0.47 tol=2.26
2024-07-12 08:13:47,113 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=49.5 pTM=0.391 ipTM=0.469 tol=2.48
2024-07-12 08:13:51,819 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=49.7 pTM=0.394 ipTM=0.478 tol=2.12
2024-07-12 08:13:56,533 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=49.9 pTM=0.393 ipTM=0.481 tol=2.48
2024-07-12 08:14:01,243 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=49.9 pTM=0.392 ipTM=0.481 tol=1.73
2024-07-12 08:14:05,957 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=50.1 pTM=0.394 ipTM=0.483 tol=1.56
2024-07-12 08:14:10,667 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=50 pTM=0.394 ipTM=0.486 tol=2.91
2024-07-12 08:14:15,379 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=50.2 pTM=0.396 ipTM=0.489 tol=4.19
2024-07-12 08:14:20,089 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=50.2 pTM=0.395 ipTM=0.487 tol=7.75
2024-07-12 08:14:24,800 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=50.1 pTM=0.394 ipTM=0.484 tol=5.05
2024-07-12 08:14:29,509 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=49.8 pTM=0.393 ipTM=0.481 tol=4.59
2024-07-12 08:14:34,220 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=49.9 pTM=0.393 ipTM=0.48 tol=4.51
2024-07-12 08:14:38,927 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=50 pTM=0.394 ipTM=0.484 tol=5.77
2024-07-12 08:14:43,637 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=50.1 pTM=0.395 ipTM=0.491 tol=2.17
2024-07-12 08:14:48,344 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=49.9 pTM=0.393 ipTM=0.483 tol=2.32
2024-07-12 08:14:53,054 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=50.3 pTM=0.394 ipTM=0.483 tol=1.48
2024-07-12 08:14:57,762 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=50.3 pTM=0.394 ipTM=0.484 tol=1.85
2024-07-12 08:15:02,471 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=50.6 pTM=0.396 ipTM=0.487 tol=7
2024-07-12 08:15:02,471 alphafold2_multimer_v3_model_3_seed_000 took 146.0s (30 recycles)
2024-07-12 08:15:07,309 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=46.1 pTM=0.343 ipTM=0.236
2024-07-12 08:15:12,006 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=47.2 pTM=0.362 ipTM=0.349 tol=15.2
2024-07-12 08:15:16,704 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=48.2 pTM=0.379 ipTM=0.408 tol=9.91
2024-07-12 08:15:21,395 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=48.6 pTM=0.375 ipTM=0.394 tol=10.3
2024-07-12 08:15:26,093 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=49.3 pTM=0.38 ipTM=0.415 tol=5.06
2024-07-12 08:15:30,783 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=49.2 pTM=0.385 ipTM=0.431 tol=4.68
2024-07-12 08:15:35,480 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=50.1 pTM=0.389 ipTM=0.438 tol=3.51
2024-07-12 08:15:40,167 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=50.8 pTM=0.395 ipTM=0.457 tol=2.58
2024-07-12 08:15:44,865 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=51 pTM=0.397 ipTM=0.472 tol=3.88
2024-07-12 08:15:49,555 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=51.2 pTM=0.398 ipTM=0.477 tol=3.79
2024-07-12 08:15:54,247 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=51.6 pTM=0.401 ipTM=0.48 tol=1.88
2024-07-12 08:15:58,937 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=51.5 pTM=0.401 ipTM=0.483 tol=2.25
2024-07-12 08:16:03,632 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=51.7 pTM=0.402 ipTM=0.484 tol=2.02
2024-07-12 08:16:08,324 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=51.7 pTM=0.403 ipTM=0.487 tol=3.7
2024-07-12 08:16:13,022 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=51.6 pTM=0.402 ipTM=0.484 tol=3.45
2024-07-12 08:16:17,712 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=51.8 pTM=0.405 ipTM=0.487 tol=4.95
2024-07-12 08:16:22,409 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=51.7 pTM=0.405 ipTM=0.488 tol=3.56
2024-07-12 08:16:27,102 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=51.6 pTM=0.404 ipTM=0.487 tol=2.57
2024-07-12 08:16:31,796 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=51.7 pTM=0.404 ipTM=0.489 tol=5.89
2024-07-12 08:16:36,485 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=51.9 pTM=0.405 ipTM=0.488 tol=5.21
2024-07-12 08:16:41,181 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=52 pTM=0.406 ipTM=0.49 tol=2.54
2024-07-12 08:16:45,874 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=52.1 pTM=0.406 ipTM=0.49 tol=4.59
2024-07-12 08:16:50,571 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=51.9 pTM=0.403 ipTM=0.488 tol=5.05
2024-07-12 08:16:55,264 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=51.5 pTM=0.403 ipTM=0.487 tol=5.65
2024-07-12 08:16:59,965 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=51.5 pTM=0.401 ipTM=0.485 tol=2.85
2024-07-12 08:17:04,660 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=51.8 pTM=0.401 ipTM=0.487 tol=5.06
2024-07-12 08:17:09,367 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=52 pTM=0.403 ipTM=0.49 tol=2.35
2024-07-12 08:17:14,062 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=51.8 pTM=0.401 ipTM=0.488 tol=2.45
2024-07-12 08:17:18,765 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=51.7 pTM=0.401 ipTM=0.487 tol=5.09
2024-07-12 08:17:23,460 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=51.9 pTM=0.403 ipTM=0.487 tol=4.64
2024-07-12 08:17:28,162 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=52 pTM=0.402 ipTM=0.488 tol=5.23
2024-07-12 08:17:28,162 alphafold2_multimer_v3_model_4_seed_000 took 145.5s (30 recycles)
2024-07-12 08:17:33,018 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=44.2 pTM=0.335 ipTM=0.218
2024-07-12 08:17:37,721 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=44.3 pTM=0.337 ipTM=0.196 tol=13.2
2024-07-12 08:17:42,422 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=48.9 pTM=0.383 ipTM=0.434 tol=12
2024-07-12 08:17:47,116 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=49.4 pTM=0.384 ipTM=0.449 tol=8.88
2024-07-12 08:17:51,814 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=49.1 pTM=0.385 ipTM=0.462 tol=6.88
2024-07-12 08:17:56,505 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=49.4 pTM=0.387 ipTM=0.457 tol=5.44
2024-07-12 08:18:01,196 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=49.5 pTM=0.386 ipTM=0.452 tol=4.46
2024-07-12 08:18:05,886 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=49.6 pTM=0.388 ipTM=0.46 tol=5.1
2024-07-12 08:18:10,583 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=49.9 pTM=0.389 ipTM=0.458 tol=5.59
2024-07-12 08:18:15,274 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=49.6 pTM=0.389 ipTM=0.46 tol=6.36
2024-07-12 08:18:19,970 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=49.7 pTM=0.389 ipTM=0.459 tol=2.58
2024-07-12 08:18:24,660 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=49.8 pTM=0.39 ipTM=0.463 tol=2.78
2024-07-12 08:18:29,350 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=49.9 pTM=0.39 ipTM=0.459 tol=2.2
2024-07-12 08:18:34,041 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=49.7 pTM=0.389 ipTM=0.463 tol=1.97
2024-07-12 08:18:38,732 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=49.6 pTM=0.388 ipTM=0.455 tol=3.04
2024-07-12 08:18:43,418 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=49.8 pTM=0.392 ipTM=0.466 tol=5.07
2024-07-12 08:18:48,106 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=49.9 pTM=0.391 ipTM=0.461 tol=4.4
2024-07-12 08:18:52,787 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=50 pTM=0.394 ipTM=0.465 tol=2.38
2024-07-12 08:18:57,475 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=50.6 pTM=0.397 ipTM=0.471 tol=3.4
2024-07-12 08:19:02,156 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=50.5 pTM=0.397 ipTM=0.471 tol=4.27
2024-07-12 08:19:06,841 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=50.8 pTM=0.397 ipTM=0.473 tol=5.68
2024-07-12 08:19:11,526 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=50.7 pTM=0.397 ipTM=0.472 tol=5.12
2024-07-12 08:19:16,213 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=50.4 pTM=0.394 ipTM=0.466 tol=3.16
2024-07-12 08:19:20,901 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=50.3 pTM=0.391 ipTM=0.461 tol=4.08
2024-07-12 08:19:25,590 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=50.3 pTM=0.392 ipTM=0.464 tol=4.76
2024-07-12 08:19:30,278 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=50.3 pTM=0.393 ipTM=0.464 tol=5.4
2024-07-12 08:19:34,970 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=50.4 pTM=0.393 ipTM=0.47 tol=4.2
2024-07-12 08:19:39,653 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=50.6 pTM=0.395 ipTM=0.471 tol=5.78
2024-07-12 08:19:44,344 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=50.5 pTM=0.393 ipTM=0.466 tol=5.97
2024-07-12 08:19:49,030 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=50.7 pTM=0.395 ipTM=0.469 tol=4.6
2024-07-12 08:19:53,716 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=50.8 pTM=0.396 ipTM=0.47 tol=4.54
2024-07-12 08:19:53,716 alphafold2_multimer_v3_model_5_seed_000 took 145.4s (30 recycles)
2024-07-12 08:19:53,865 reranking models by 'multimer' metric
2024-07-12 08:20:26,668 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 08:20:59,938 Relaxation took 66.1s
2024-07-12 08:20:59,938 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=52 pTM=0.402 ipTM=0.488
2024-07-12 08:21:19,383 Relaxation took 19.4s
2024-07-12 08:21:19,383 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=50.6 pTM=0.396 ipTM=0.487
2024-07-12 08:21:37,760 Relaxation took 18.4s
2024-07-12 08:21:37,760 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=53.7 pTM=0.402 ipTM=0.485
2024-07-12 08:21:47,598 Relaxation took 9.8s
2024-07-12 08:21:47,598 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=50.8 pTM=0.396 ipTM=0.47
2024-07-12 08:22:06,796 Relaxation took 19.2s
2024-07-12 08:22:06,796 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=49.1 pTM=0.35 ipTM=0.263
2024-07-12 08:22:07,706 Done