2024-07-12 08:10:13,005 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 08:10:13,403 Running on GPU
2024-07-12 08:10:26,239 Found 6 citations for tools or databases
2024-07-12 08:10:26,239 Query 1/1: PKHN1_DCUP (length 978)
2024-07-12 08:10:26,687 Sleeping for 8s. Reason: PENDING
2024-07-12 08:10:35,112 Sleeping for 5s. Reason: RUNNING
2024-07-12 08:10:40,567 Sleeping for 5s. Reason: RUNNING
2024-07-12 08:10:45,992 Sleeping for 8s. Reason: RUNNING
2024-07-12 08:10:54,419 Sleeping for 5s. Reason: RUNNING
2024-07-12 08:10:59,831 Sleeping for 6s. Reason: RUNNING
2024-07-12 08:11:06,239 Sleeping for 10s. Reason: RUNNING
2024-07-12 08:11:16,670 Sleeping for 6s. Reason: RUNNING
2024-07-12 08:11:23,090 Sleeping for 10s. Reason: RUNNING
2024-07-12 08:11:33,531 Sleeping for 6s. Reason: RUNNING
2024-07-12 08:11:40,040 Sleeping for 6s. Reason: RUNNING
2024-07-12 08:11:46,459 Sleeping for 8s. Reason: RUNNING
2024-07-12 08:11:54,876 Sleeping for 8s. Reason: RUNNING
2024-07-12 08:12:03,286 Sleeping for 7s. Reason: RUNNING
2024-07-12 08:12:10,701 Sleeping for 9s. Reason: RUNNING
2024-07-12 08:12:20,121 Sleeping for 5s. Reason: RUNNING
2024-07-12 08:12:25,542 Sleeping for 7s. Reason: RUNNING
2024-07-12 08:12:32,980 Sleeping for 10s. Reason: RUNNING
2024-07-12 08:12:43,420 Sleeping for 6s. Reason: RUNNING
2024-07-12 08:12:51,687 Sleeping for 6s. Reason: PENDING
2024-07-12 08:12:58,120 Sleeping for 5s. Reason: RUNNING
2024-07-12 08:13:03,539 Sleeping for 7s. Reason: RUNNING
2024-07-12 08:13:10,978 Sleeping for 5s. Reason: RUNNING
2024-07-12 08:13:16,413 Sleeping for 6s. Reason: RUNNING
2024-07-12 08:13:22,816 Sleeping for 8s. Reason: RUNNING
2024-07-12 08:13:31,259 Sleeping for 10s. Reason: RUNNING
2024-07-12 08:13:41,716 Sleeping for 8s. Reason: RUNNING
2024-07-12 08:13:50,139 Sleeping for 8s. Reason: RUNNING
2024-07-12 08:13:58,569 Sleeping for 10s. Reason: RUNNING
2024-07-12 08:14:11,553 Setting max_seq=508, max_extra_seq=2048
2024-07-12 08:18:05,992 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=53.9 pTM=0.445 ipTM=0.298
2024-07-12 08:18:26,514 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=53.4 pTM=0.446 ipTM=0.231 tol=11.9
2024-07-12 08:18:47,105 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=53.1 pTM=0.448 ipTM=0.237 tol=9.94
2024-07-12 08:19:07,743 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=53 pTM=0.449 ipTM=0.239 tol=8.48
2024-07-12 08:19:28,413 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=53.5 pTM=0.451 ipTM=0.235 tol=7.05
2024-07-12 08:19:49,092 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=53.5 pTM=0.45 ipTM=0.23 tol=6.47
2024-07-12 08:20:09,751 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=53.5 pTM=0.449 ipTM=0.215 tol=6.45
2024-07-12 08:20:30,446 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=53.4 pTM=0.449 ipTM=0.207 tol=5
2024-07-12 08:20:51,142 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=53.6 pTM=0.449 ipTM=0.211 tol=6.42
2024-07-12 08:21:11,827 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=53.6 pTM=0.45 ipTM=0.227 tol=3.71
2024-07-12 08:21:32,541 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=53.5 pTM=0.449 ipTM=0.23 tol=3.66
2024-07-12 08:21:53,265 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=53.5 pTM=0.451 ipTM=0.24 tol=4.61
2024-07-12 08:22:13,991 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=53.8 pTM=0.45 ipTM=0.216 tol=4.15
2024-07-12 08:22:34,700 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=53.7 pTM=0.45 ipTM=0.214 tol=6.16
2024-07-12 08:22:55,437 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=53.6 pTM=0.45 ipTM=0.23 tol=4.74
2024-07-12 08:23:16,159 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=53.7 pTM=0.449 ipTM=0.226 tol=5.87
2024-07-12 08:23:36,885 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=53.6 pTM=0.449 ipTM=0.221 tol=2.26
2024-07-12 08:23:57,625 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=53.7 pTM=0.45 ipTM=0.213 tol=2.52
2024-07-12 08:24:18,353 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=53.7 pTM=0.45 ipTM=0.222 tol=2.04
2024-07-12 08:24:39,087 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=53.8 pTM=0.451 ipTM=0.224 tol=6.43
2024-07-12 08:24:59,808 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=53.5 pTM=0.45 ipTM=0.204 tol=6.05
2024-07-12 08:25:20,538 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=53.5 pTM=0.45 ipTM=0.208 tol=5.95
2024-07-12 08:25:41,270 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=53.4 pTM=0.45 ipTM=0.204 tol=3.39
2024-07-12 08:26:01,981 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=53.4 pTM=0.45 ipTM=0.215 tol=8.86
2024-07-12 08:26:22,708 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=53.2 pTM=0.45 ipTM=0.222 tol=5.96
2024-07-12 08:26:43,435 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=53.2 pTM=0.45 ipTM=0.212 tol=3.63
2024-07-12 08:27:04,160 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=53.3 pTM=0.449 ipTM=0.225 tol=2.85
2024-07-12 08:27:24,890 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=53.2 pTM=0.452 ipTM=0.218 tol=3.05
2024-07-12 08:27:45,602 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=53.4 pTM=0.45 ipTM=0.219 tol=4.85
2024-07-12 08:28:06,314 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=53.6 pTM=0.45 ipTM=0.237 tol=4.56
2024-07-12 08:28:27,032 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=53.2 pTM=0.449 ipTM=0.231 tol=3.28
2024-07-12 08:28:27,033 alphafold2_multimer_v3_model_1_seed_000 took 787.4s (30 recycles)
2024-07-12 08:28:48,307 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=54.8 pTM=0.453 ipTM=0.454
2024-07-12 08:29:09,048 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=54.3 pTM=0.459 ipTM=0.259 tol=16.2
2024-07-12 08:29:29,788 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=54.8 pTM=0.458 ipTM=0.309 tol=11.7
2024-07-12 08:29:50,521 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=54.6 pTM=0.462 ipTM=0.469 tol=6.2
2024-07-12 08:30:11,262 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=54.9 pTM=0.459 ipTM=0.425 tol=3.91
2024-07-12 08:30:32,018 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=54.7 pTM=0.461 ipTM=0.502 tol=3.35
2024-07-12 08:30:52,759 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=54.8 pTM=0.459 ipTM=0.455 tol=2.53
2024-07-12 08:31:13,512 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=54.5 pTM=0.461 ipTM=0.517 tol=4.06
2024-07-12 08:31:34,286 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=54.8 pTM=0.459 ipTM=0.482 tol=3.85
2024-07-12 08:31:55,043 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=54.8 pTM=0.46 ipTM=0.517 tol=3.02
2024-07-12 08:32:15,785 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=54.7 pTM=0.458 ipTM=0.464 tol=2.65
2024-07-12 08:32:36,539 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=54.5 pTM=0.464 ipTM=0.522 tol=2.93
2024-07-12 08:32:57,308 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=54.7 pTM=0.458 ipTM=0.439 tol=2.62
2024-07-12 08:33:18,068 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=54.5 pTM=0.46 ipTM=0.502 tol=4.21
2024-07-12 08:33:38,819 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=54.6 pTM=0.46 ipTM=0.462 tol=3.21
2024-07-12 08:33:59,570 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=54.6 pTM=0.462 ipTM=0.501 tol=2.88
2024-07-12 08:34:20,296 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=54.6 pTM=0.459 ipTM=0.46 tol=2.38
2024-07-12 08:34:41,060 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=54.6 pTM=0.461 ipTM=0.523 tol=2.33
2024-07-12 08:35:01,832 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=54.6 pTM=0.458 ipTM=0.466 tol=2.88
2024-07-12 08:35:22,557 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=54.6 pTM=0.461 ipTM=0.53 tol=1.94
2024-07-12 08:35:43,308 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=54.5 pTM=0.459 ipTM=0.472 tol=2.42
2024-07-12 08:36:04,066 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=54.6 pTM=0.46 ipTM=0.526 tol=4.02
2024-07-12 08:36:24,823 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54.8 pTM=0.459 ipTM=0.467 tol=3.5
2024-07-12 08:36:45,554 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=54.6 pTM=0.46 ipTM=0.49 tol=3.12
2024-07-12 08:37:06,304 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=54.7 pTM=0.459 ipTM=0.456 tol=3.21
2024-07-12 08:37:27,067 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=54.6 pTM=0.46 ipTM=0.508 tol=2.78
2024-07-12 08:37:47,844 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=54.7 pTM=0.457 ipTM=0.435 tol=2.4
2024-07-12 08:38:08,615 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=54.4 pTM=0.459 ipTM=0.505 tol=6.46
2024-07-12 08:38:29,357 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=54.6 pTM=0.458 ipTM=0.444 tol=4.96
2024-07-12 08:38:50,105 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=54.5 pTM=0.46 ipTM=0.523 tol=3.07
2024-07-12 08:39:10,862 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=54.6 pTM=0.458 ipTM=0.453 tol=3.56
2024-07-12 08:39:10,863 alphafold2_multimer_v3_model_2_seed_000 took 643.2s (30 recycles)
2024-07-12 08:39:32,184 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=53.6 pTM=0.441 ipTM=0.271
2024-07-12 08:39:52,934 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=54.2 pTM=0.448 ipTM=0.203 tol=14.8
2024-07-12 08:40:13,678 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=53.4 pTM=0.439 ipTM=0.207 tol=12.4
2024-07-12 08:40:34,445 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=53.3 pTM=0.448 ipTM=0.234 tol=10.7
2024-07-12 08:40:55,204 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=53.9 pTM=0.448 ipTM=0.31 tol=5.67
2024-07-12 08:41:15,926 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=54 pTM=0.45 ipTM=0.34 tol=4.92
2024-07-12 08:41:36,680 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=54.1 pTM=0.45 ipTM=0.344 tol=4.67
2024-07-12 08:41:57,458 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=54 pTM=0.451 ipTM=0.352 tol=7.73
2024-07-12 08:42:18,262 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=54.5 pTM=0.451 ipTM=0.363 tol=7.52
2024-07-12 08:42:39,045 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=54.4 pTM=0.45 ipTM=0.352 tol=6.96
2024-07-12 08:42:59,842 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=54.5 pTM=0.452 ipTM=0.361 tol=3.43
2024-07-12 08:43:20,654 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=54.6 pTM=0.451 ipTM=0.362 tol=2.42
2024-07-12 08:43:41,461 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=54.7 pTM=0.451 ipTM=0.335 tol=3.14
2024-07-12 08:44:02,263 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=54.6 pTM=0.451 ipTM=0.357 tol=3.35
2024-07-12 08:44:23,053 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=54.6 pTM=0.453 ipTM=0.379 tol=3
2024-07-12 08:44:43,842 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=54.6 pTM=0.452 ipTM=0.354 tol=2.84
2024-07-12 08:45:04,621 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=54.5 pTM=0.452 ipTM=0.342 tol=2.71
2024-07-12 08:45:25,419 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=54.5 pTM=0.452 ipTM=0.343 tol=3.08
2024-07-12 08:45:46,222 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=54.7 pTM=0.453 ipTM=0.352 tol=4.27
2024-07-12 08:46:07,037 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=54.6 pTM=0.453 ipTM=0.352 tol=3.66
2024-07-12 08:46:27,833 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=54.6 pTM=0.453 ipTM=0.331 tol=3.27
2024-07-12 08:46:48,595 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=54.5 pTM=0.451 ipTM=0.304 tol=3.84
2024-07-12 08:47:09,377 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=54.5 pTM=0.45 ipTM=0.303 tol=2.82
2024-07-12 08:47:30,155 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=54.8 pTM=0.451 ipTM=0.304 tol=3.82
2024-07-12 08:47:50,970 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=54.6 pTM=0.45 ipTM=0.3 tol=6.08
2024-07-12 08:48:11,769 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54.1 pTM=0.452 ipTM=0.293 tol=4.19
2024-07-12 08:48:32,585 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=54.7 pTM=0.45 ipTM=0.337 tol=6.1
2024-07-12 08:48:53,385 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=54.6 pTM=0.452 ipTM=0.332 tol=3.31
2024-07-12 08:49:14,178 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=54.6 pTM=0.45 ipTM=0.337 tol=3.1
2024-07-12 08:49:34,964 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=54.5 pTM=0.452 ipTM=0.342 tol=3.92
2024-07-12 08:49:55,764 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=54.5 pTM=0.452 ipTM=0.333 tol=3.61
2024-07-12 08:49:55,764 alphafold2_multimer_v3_model_3_seed_000 took 644.3s (30 recycles)
2024-07-12 08:50:17,028 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=53.5 pTM=0.44 ipTM=0.216
2024-07-12 08:50:37,781 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=53.2 pTM=0.446 ipTM=0.223 tol=18.5
2024-07-12 08:50:58,476 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=53.6 pTM=0.444 ipTM=0.185 tol=17.1
2024-07-12 08:51:19,201 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=53.1 pTM=0.444 ipTM=0.175 tol=11.4
2024-07-12 08:51:39,950 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=53.2 pTM=0.447 ipTM=0.169 tol=6.45
2024-07-12 08:52:00,689 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=53.2 pTM=0.45 ipTM=0.186 tol=8.07
2024-07-12 08:52:21,426 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=53.4 pTM=0.451 ipTM=0.226 tol=6.71
2024-07-12 08:52:42,162 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=52.8 pTM=0.453 ipTM=0.197 tol=6.76
2024-07-12 08:53:02,896 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=53.2 pTM=0.453 ipTM=0.223 tol=5.93
2024-07-12 08:53:23,640 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=52.9 pTM=0.452 ipTM=0.219 tol=6.07
2024-07-12 08:53:44,389 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=53.5 pTM=0.454 ipTM=0.204 tol=7.07
2024-07-12 08:54:05,146 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=53.4 pTM=0.45 ipTM=0.225 tol=6.58
2024-07-12 08:54:25,883 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=53.5 pTM=0.453 ipTM=0.2 tol=6.01
2024-07-12 08:54:46,613 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=53.5 pTM=0.453 ipTM=0.214 tol=9.17
2024-07-12 08:55:07,354 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=53.3 pTM=0.454 ipTM=0.232 tol=6.93
2024-07-12 08:55:28,096 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=53.1 pTM=0.449 ipTM=0.233 tol=13.5
2024-07-12 08:55:48,835 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=53.2 pTM=0.45 ipTM=0.198 tol=6.33
2024-07-12 08:56:09,563 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=53.3 pTM=0.45 ipTM=0.233 tol=4.81
2024-07-12 08:56:30,272 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=53.3 pTM=0.454 ipTM=0.239 tol=8.79
2024-07-12 08:56:50,997 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=53.3 pTM=0.45 ipTM=0.245 tol=9.27
2024-07-12 08:57:11,705 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=53.1 pTM=0.456 ipTM=0.207 tol=7.02
2024-07-12 08:57:32,391 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=53.3 pTM=0.452 ipTM=0.217 tol=9.76
2024-07-12 08:57:53,088 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=53.2 pTM=0.452 ipTM=0.223 tol=5.76
2024-07-12 08:58:13,776 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=53.2 pTM=0.451 ipTM=0.272 tol=7.63
2024-07-12 08:58:34,491 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=53.3 pTM=0.453 ipTM=0.221 tol=5.84
2024-07-12 08:58:55,212 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=53 pTM=0.45 ipTM=0.199 tol=7.37
2024-07-12 08:59:15,935 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=53.3 pTM=0.451 ipTM=0.222 tol=8.05
2024-07-12 08:59:36,670 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=53.2 pTM=0.452 ipTM=0.253 tol=9.65
2024-07-12 08:59:57,381 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=53.5 pTM=0.455 ipTM=0.217 tol=7.26
2024-07-12 09:00:18,102 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=53.4 pTM=0.452 ipTM=0.227 tol=5.97
2024-07-12 09:00:38,806 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=53.2 pTM=0.454 ipTM=0.249 tol=5.87
2024-07-12 09:00:38,807 alphafold2_multimer_v3_model_4_seed_000 took 642.4s (30 recycles)
2024-07-12 09:01:00,192 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=53.5 pTM=0.441 ipTM=0.254
2024-07-12 09:01:21,020 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=55 pTM=0.448 ipTM=0.211 tol=17
2024-07-12 09:01:41,851 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=54.6 pTM=0.446 ipTM=0.178 tol=10.9
2024-07-12 09:02:02,674 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=53.8 pTM=0.444 ipTM=0.164 tol=12
2024-07-12 09:02:23,504 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=54.1 pTM=0.445 ipTM=0.157 tol=4.61
2024-07-12 09:02:44,327 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=54 pTM=0.444 ipTM=0.166 tol=4.87
2024-07-12 09:03:05,139 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=54 pTM=0.444 ipTM=0.165 tol=4.05
2024-07-12 09:03:25,997 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=54.1 pTM=0.444 ipTM=0.163 tol=3.55
2024-07-12 09:03:46,835 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=54.2 pTM=0.444 ipTM=0.192 tol=4.3
2024-07-12 09:04:07,669 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=54 pTM=0.445 ipTM=0.213 tol=8.27
2024-07-12 09:04:28,517 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=54.2 pTM=0.447 ipTM=0.275 tol=6.92
2024-07-12 09:04:49,370 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=54.3 pTM=0.448 ipTM=0.296 tol=7.1
2024-07-12 09:05:10,223 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=54.1 pTM=0.445 ipTM=0.26 tol=14.7
2024-07-12 09:05:31,062 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=54.1 pTM=0.449 ipTM=0.277 tol=6.31
2024-07-12 09:05:51,896 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=54.2 pTM=0.447 ipTM=0.303 tol=6.74
2024-07-12 09:06:12,743 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=54.1 pTM=0.448 ipTM=0.294 tol=9.93
2024-07-12 09:06:33,591 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=54 pTM=0.445 ipTM=0.263 tol=8.91
2024-07-12 09:06:54,425 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=54.1 pTM=0.447 ipTM=0.284 tol=10.9
2024-07-12 09:07:15,255 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=54.5 pTM=0.446 ipTM=0.312 tol=4.94
2024-07-12 09:07:36,087 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=54.5 pTM=0.447 ipTM=0.32 tol=5.55
2024-07-12 09:07:56,917 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=54.5 pTM=0.446 ipTM=0.299 tol=8.74
2024-07-12 09:08:17,757 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=54.5 pTM=0.444 ipTM=0.296 tol=9.83
2024-07-12 09:08:38,599 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=54.7 pTM=0.446 ipTM=0.312 tol=8.77
2024-07-12 09:08:59,431 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=54.4 pTM=0.447 ipTM=0.336 tol=7.61
2024-07-12 09:09:20,280 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=54.5 pTM=0.446 ipTM=0.331 tol=9.84
2024-07-12 09:09:41,109 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=54.6 pTM=0.445 ipTM=0.323 tol=6.97
2024-07-12 09:10:01,965 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=54.6 pTM=0.446 ipTM=0.341 tol=8.6
2024-07-12 09:10:22,817 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=54.8 pTM=0.447 ipTM=0.338 tol=5.36
2024-07-12 09:10:43,667 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=54.5 pTM=0.448 ipTM=0.334 tol=9.31
2024-07-12 09:11:04,528 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=54.4 pTM=0.447 ipTM=0.32 tol=7.29
2024-07-12 09:11:25,390 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=54.6 pTM=0.447 ipTM=0.312 tol=7.62
2024-07-12 09:11:25,390 alphafold2_multimer_v3_model_5_seed_000 took 646.0s (30 recycles)
2024-07-12 09:11:25,984 reranking models by 'multimer' metric
2024-07-12 09:11:38,962 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 09:13:38,445 Relaxation took 132.5s
2024-07-12 09:13:38,445 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=54.6 pTM=0.458 ipTM=0.453
2024-07-12 09:15:21,305 Relaxation took 102.9s
2024-07-12 09:15:21,306 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=54.5 pTM=0.452 ipTM=0.333
2024-07-12 09:17:33,555 Relaxation took 132.2s
2024-07-12 09:17:33,555 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=54.6 pTM=0.447 ipTM=0.312
2024-07-12 09:19:25,525 Relaxation took 112.0s
2024-07-12 09:19:25,525 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=53.2 pTM=0.454 ipTM=0.249
2024-07-12 09:21:02,908 Relaxation took 97.4s
2024-07-12 09:21:02,909 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=53.2 pTM=0.449 ipTM=0.231
2024-07-12 09:21:08,291 Done