2024-07-12 08:23:41,373 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 08:23:41,673 Running on GPU
2024-07-12 08:23:51,456 Found 6 citations for tools or databases
2024-07-12 08:23:51,456 Query 1/1: PLD1_CAR10 (length 2106)
2024-07-12 08:23:53,870 Sleeping for 7s. Reason: PENDING
2024-07-12 08:24:01,293 Sleeping for 10s. Reason: RUNNING
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2024-07-12 08:24:44,449 Sleeping for 7s. Reason: RUNNING
2024-07-12 08:24:51,873 Sleeping for 10s. Reason: RUNNING
2024-07-12 08:25:02,321 Sleeping for 9s. Reason: RUNNING
2024-07-12 08:25:11,793 Sleeping for 10s. Reason: RUNNING
2024-07-12 08:25:22,207 Sleeping for 8s. Reason: RUNNING
2024-07-12 08:25:30,625 Sleeping for 8s. Reason: RUNNING
2024-07-12 08:25:39,057 Sleeping for 7s. Reason: RUNNING
2024-07-12 08:25:46,480 Sleeping for 5s. Reason: RUNNING
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2024-07-12 08:26:02,325 Sleeping for 10s. Reason: RUNNING
2024-07-12 08:26:14,589 Sleeping for 8s. Reason: PENDING
2024-07-12 08:26:23,017 Sleeping for 7s. Reason: RUNNING
2024-07-12 08:26:30,446 Sleeping for 5s. Reason: RUNNING
2024-07-12 08:26:35,878 Sleeping for 9s. Reason: RUNNING
2024-07-12 08:26:45,312 Sleeping for 8s. Reason: RUNNING
2024-07-12 08:26:53,732 Sleeping for 7s. Reason: RUNNING
2024-07-12 08:27:01,179 Sleeping for 8s. Reason: RUNNING
2024-07-12 08:27:09,611 Sleeping for 5s. Reason: RUNNING
2024-07-12 08:27:15,037 Sleeping for 10s. Reason: RUNNING
2024-07-12 08:27:25,465 Sleeping for 9s. Reason: RUNNING
2024-07-12 08:27:34,896 Sleeping for 5s. Reason: RUNNING
2024-07-12 08:27:40,328 Sleeping for 7s. Reason: RUNNING
2024-07-12 08:27:47,765 Sleeping for 9s. Reason: RUNNING
2024-07-12 08:27:57,197 Sleeping for 9s. Reason: RUNNING
2024-07-12 08:28:06,621 Sleeping for 10s. Reason: RUNNING
2024-07-12 08:28:21,028 Setting max_seq=508, max_extra_seq=2048
2024-07-12 08:34:47,505 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=57.9 pTM=0.526 ipTM=0.229
2024-07-12 08:37:47,055 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=59.5 pTM=0.533 ipTM=0.327 tol=18.1
2024-07-12 08:40:46,518 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=60.2 pTM=0.535 ipTM=0.356 tol=11
2024-07-12 08:43:45,923 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=60.6 pTM=0.536 ipTM=0.427 tol=7.75
2024-07-12 08:46:45,322 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=60.8 pTM=0.539 ipTM=0.413 tol=6.35
2024-07-12 08:49:44,662 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=61.2 pTM=0.538 ipTM=0.344 tol=5.16
2024-07-12 08:52:44,039 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=61.3 pTM=0.54 ipTM=0.405 tol=4.5
2024-07-12 08:55:43,432 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61.3 pTM=0.541 ipTM=0.438 tol=3.36
2024-07-12 08:58:42,712 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=61.1 pTM=0.537 ipTM=0.335 tol=2.91
2024-07-12 09:01:42,019 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=61.1 pTM=0.537 ipTM=0.328 tol=3.76
2024-07-12 09:04:41,334 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60.8 pTM=0.536 ipTM=0.312 tol=8.03
2024-07-12 09:07:40,643 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=61 pTM=0.541 ipTM=0.357 tol=5.74
2024-07-12 09:10:39,933 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60.7 pTM=0.533 ipTM=0.334 tol=7.17
2024-07-12 09:13:39,234 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=60.7 pTM=0.534 ipTM=0.397 tol=5.34
2024-07-12 09:16:38,535 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.9 pTM=0.538 ipTM=0.385 tol=3.99
2024-07-12 09:19:37,933 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=61.2 pTM=0.539 ipTM=0.346 tol=3.2
2024-07-12 09:22:37,329 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=61.1 pTM=0.538 ipTM=0.333 tol=3.11
2024-07-12 09:25:36,674 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=61.2 pTM=0.539 ipTM=0.337 tol=3.32
2024-07-12 09:28:35,956 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=60.9 pTM=0.537 ipTM=0.32 tol=2.33
2024-07-12 09:31:35,293 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=60.8 pTM=0.538 ipTM=0.345 tol=2.82
2024-07-12 09:34:34,599 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=61.1 pTM=0.538 ipTM=0.358 tol=2.78
2024-07-12 09:37:33,893 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=61.1 pTM=0.537 ipTM=0.354 tol=2.65
2024-07-12 09:40:33,185 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=61.2 pTM=0.538 ipTM=0.366 tol=2.42
2024-07-12 09:43:32,471 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=61.2 pTM=0.539 ipTM=0.37 tol=2.79
2024-07-12 09:46:31,771 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=61.2 pTM=0.539 ipTM=0.402 tol=3.74
2024-07-12 09:49:31,060 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=61.5 pTM=0.541 ipTM=0.379 tol=3.88
2024-07-12 09:52:30,358 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=61.2 pTM=0.54 ipTM=0.377 tol=2.66
2024-07-12 09:55:29,610 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=61.3 pTM=0.539 ipTM=0.374 tol=2.64
2024-07-12 09:58:28,825 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=61 pTM=0.537 ipTM=0.345 tol=2.11
2024-07-12 10:01:28,062 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=61 pTM=0.538 ipTM=0.37 tol=1.89
2024-07-12 10:04:27,331 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=61.1 pTM=0.54 ipTM=0.362 tol=2.11
2024-07-12 10:04:27,334 alphafold2_multimer_v3_model_1_seed_000 took 5719.0s (30 recycles)
2024-07-12 10:07:29,545 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=57.6 pTM=0.53 ipTM=0.395
2024-07-12 10:10:29,462 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=61.3 pTM=0.544 ipTM=0.487 tol=18.2
2024-07-12 10:13:29,250 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=61.8 pTM=0.551 ipTM=0.569 tol=9.38
2024-07-12 10:16:29,000 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=62.2 pTM=0.555 ipTM=0.577 tol=9.59
2024-07-12 10:19:28,713 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=62.3 pTM=0.551 ipTM=0.545 tol=5.81
2024-07-12 10:22:28,465 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=62.5 pTM=0.549 ipTM=0.548 tol=6.73
2024-07-12 10:25:28,168 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.6 pTM=0.553 ipTM=0.569 tol=5.45
2024-07-12 10:28:27,906 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=62.4 pTM=0.552 ipTM=0.583 tol=4.67
2024-07-12 10:31:27,595 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62.5 pTM=0.557 ipTM=0.575 tol=9.88
2024-07-12 10:34:27,244 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=62.8 pTM=0.554 ipTM=0.573 tol=5.38
2024-07-12 10:37:26,912 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62.7 pTM=0.558 ipTM=0.598 tol=6.01
2024-07-12 10:40:26,587 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=62.8 pTM=0.554 ipTM=0.579 tol=2.38
2024-07-12 10:43:26,287 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=62.8 pTM=0.554 ipTM=0.584 tol=2.16
2024-07-12 10:46:25,901 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=62.6 pTM=0.559 ipTM=0.553 tol=8.26
2024-07-12 10:49:25,489 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=62.9 pTM=0.556 ipTM=0.569 tol=3.71
2024-07-12 10:52:25,111 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62.7 pTM=0.555 ipTM=0.575 tol=4.87
2024-07-12 10:55:24,721 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=62.9 pTM=0.557 ipTM=0.578 tol=3.49
2024-07-12 10:58:24,316 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62.8 pTM=0.555 ipTM=0.583 tol=2.2
2024-07-12 11:01:24,041 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=62.3 pTM=0.552 ipTM=0.564 tol=6.41
2024-07-12 11:04:23,686 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62.7 pTM=0.556 ipTM=0.588 tol=3.68
2024-07-12 11:07:23,375 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62.8 pTM=0.555 ipTM=0.591 tol=2.45
2024-07-12 11:10:23,012 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62.7 pTM=0.555 ipTM=0.593 tol=4.05
2024-07-12 11:13:22,678 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62.9 pTM=0.555 ipTM=0.596 tol=2.09
2024-07-12 11:16:22,329 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.8 pTM=0.557 ipTM=0.58 tol=1.8
2024-07-12 11:19:21,933 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=62.8 pTM=0.558 ipTM=0.576 tol=2.47
2024-07-12 11:22:21,555 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=63 pTM=0.555 ipTM=0.601 tol=2.69
2024-07-12 11:25:21,242 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=62.5 pTM=0.552 ipTM=0.587 tol=4.94
2024-07-12 11:28:20,885 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.8 pTM=0.554 ipTM=0.6 tol=3.69
2024-07-12 11:31:20,493 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=63.1 pTM=0.559 ipTM=0.592 tol=7.4
2024-07-12 11:34:20,099 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=62.5 pTM=0.555 ipTM=0.574 tol=7.15
2024-07-12 11:37:19,707 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=62.6 pTM=0.555 ipTM=0.598 tol=3.43
2024-07-12 11:37:19,710 alphafold2_multimer_v3_model_2_seed_000 took 5569.8s (30 recycles)
2024-07-12 11:40:25,238 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=56.4 pTM=0.515 ipTM=0.21
2024-07-12 11:43:25,133 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=59.6 pTM=0.53 ipTM=0.393 tol=16
2024-07-12 11:46:24,934 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=60 pTM=0.527 ipTM=0.255 tol=11.1
2024-07-12 11:49:24,610 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=60 pTM=0.527 ipTM=0.321 tol=7.32
2024-07-12 11:52:24,300 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=60.7 pTM=0.533 ipTM=0.369 tol=6.21
2024-07-12 11:55:23,958 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=60.6 pTM=0.526 ipTM=0.273 tol=6.95
2024-07-12 11:58:23,756 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=58.9 pTM=0.519 ipTM=0.228 tol=11
2024-07-12 12:01:23,567 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=59.5 pTM=0.527 ipTM=0.292 tol=9.53
2024-07-12 12:04:23,248 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=60.7 pTM=0.53 ipTM=0.342 tol=8.37
2024-07-12 12:07:23,018 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=59.5 pTM=0.526 ipTM=0.287 tol=8.74
2024-07-12 12:10:22,850 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=59 pTM=0.522 ipTM=0.225 tol=7.64
2024-07-12 12:13:22,544 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=60.4 pTM=0.535 ipTM=0.415 tol=11
2024-07-12 12:16:22,296 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=60.9 pTM=0.53 ipTM=0.361 tol=6.31
2024-07-12 12:19:21,998 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=60.2 pTM=0.525 ipTM=0.297 tol=4.82
2024-07-12 12:22:21,643 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=60.7 pTM=0.53 ipTM=0.385 tol=4.93
2024-07-12 12:25:21,363 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=60.9 pTM=0.527 ipTM=0.316 tol=4.14
2024-07-12 12:28:21,218 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=60.1 pTM=0.521 ipTM=0.248 tol=7.42
2024-07-12 12:31:20,925 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.3 pTM=0.537 ipTM=0.474 tol=6.25
2024-07-12 12:34:20,674 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.4 pTM=0.532 ipTM=0.395 tol=3.78
2024-07-12 12:37:20,383 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.4 pTM=0.533 ipTM=0.4 tol=3.84
2024-07-12 12:40:20,148 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=61 pTM=0.531 ipTM=0.385 tol=4.07
2024-07-12 12:43:19,871 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=60.9 pTM=0.529 ipTM=0.354 tol=3.17
2024-07-12 12:46:19,624 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61.4 pTM=0.532 ipTM=0.409 tol=4.02
2024-07-12 12:49:19,375 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=61.4 pTM=0.53 ipTM=0.365 tol=4.39
2024-07-12 12:52:19,100 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=60.9 pTM=0.525 ipTM=0.323 tol=5.19
2024-07-12 12:55:18,845 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.2 pTM=0.533 ipTM=0.438 tol=5.5
2024-07-12 12:58:18,587 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=61.6 pTM=0.527 ipTM=0.346 tol=5.33
2024-07-12 13:01:18,348 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=61.2 pTM=0.524 ipTM=0.281 tol=7.11
2024-07-12 13:04:18,098 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=60.7 pTM=0.524 ipTM=0.279 tol=6.25
2024-07-12 13:07:17,808 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=60.5 pTM=0.529 ipTM=0.338 tol=5.07
2024-07-12 13:10:17,459 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=61.5 pTM=0.531 ipTM=0.392 tol=8.34
2024-07-12 13:10:17,461 alphafold2_multimer_v3_model_3_seed_000 took 5572.0s (30 recycles)
2024-07-12 13:13:19,877 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=57.6 pTM=0.527 ipTM=0.316
2024-07-12 13:16:19,816 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=59.4 pTM=0.523 ipTM=0.28 tol=18.1
2024-07-12 13:19:19,766 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=60.2 pTM=0.524 ipTM=0.342 tol=15.7
2024-07-12 13:22:19,702 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=60 pTM=0.522 ipTM=0.276 tol=11.7
2024-07-12 13:25:19,603 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=60.1 pTM=0.522 ipTM=0.264 tol=10.7
2024-07-12 13:28:19,481 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=60 pTM=0.521 ipTM=0.261 tol=6.21
2024-07-12 13:31:19,357 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=59.7 pTM=0.521 ipTM=0.252 tol=6.87
2024-07-12 13:34:19,169 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=59.8 pTM=0.521 ipTM=0.249 tol=6.06
2024-07-12 13:37:18,971 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=59.7 pTM=0.521 ipTM=0.256 tol=7.44
2024-07-12 13:40:18,788 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=60.2 pTM=0.523 ipTM=0.296 tol=6.6
2024-07-12 13:43:18,669 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=60.1 pTM=0.522 ipTM=0.298 tol=7.69
2024-07-12 13:46:18,444 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=60.3 pTM=0.524 ipTM=0.311 tol=6.12
2024-07-12 13:49:18,277 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=60.2 pTM=0.523 ipTM=0.288 tol=6.44
2024-07-12 13:52:18,058 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=59.9 pTM=0.522 ipTM=0.283 tol=7.81
2024-07-12 13:55:17,921 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=59.9 pTM=0.521 ipTM=0.272 tol=6.61
2024-07-12 13:58:17,790 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=59.8 pTM=0.521 ipTM=0.255 tol=6.6
2024-07-12 14:01:17,669 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=60 pTM=0.522 ipTM=0.275 tol=8.12
2024-07-12 14:04:17,532 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=59.9 pTM=0.523 ipTM=0.294 tol=7.54
2024-07-12 14:07:17,360 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=59.9 pTM=0.521 ipTM=0.262 tol=7.4
2024-07-12 14:10:17,172 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=59.9 pTM=0.524 ipTM=0.295 tol=4.59
2024-07-12 14:13:17,049 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=60.1 pTM=0.521 ipTM=0.263 tol=7.46
2024-07-12 14:16:16,948 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=60.1 pTM=0.523 ipTM=0.293 tol=7.59
2024-07-12 14:19:16,881 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=60.1 pTM=0.522 ipTM=0.275 tol=8.77
2024-07-12 14:22:16,785 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=60.4 pTM=0.523 ipTM=0.287 tol=8.5
2024-07-12 14:25:16,664 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=60.1 pTM=0.522 ipTM=0.28 tol=3.92
2024-07-12 14:28:16,510 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60.2 pTM=0.522 ipTM=0.3 tol=3.86
2024-07-12 14:31:16,421 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=60.2 pTM=0.522 ipTM=0.283 tol=4.25
2024-07-12 14:34:16,298 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=59.9 pTM=0.521 ipTM=0.255 tol=7.21
2024-07-12 14:37:16,209 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=59.9 pTM=0.521 ipTM=0.284 tol=8.3
2024-07-12 14:40:16,089 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=59.9 pTM=0.521 ipTM=0.284 tol=8.92
2024-07-12 14:43:16,030 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=59.8 pTM=0.521 ipTM=0.275 tol=7.04
2024-07-12 14:43:16,032 alphafold2_multimer_v3_model_4_seed_000 took 5576.0s (30 recycles)
2024-07-12 14:46:19,404 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=55.9 pTM=0.521 ipTM=0.266
2024-07-12 14:49:19,374 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=58.4 pTM=0.531 ipTM=0.309 tol=7.86
2024-07-12 14:52:19,231 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=58.7 pTM=0.53 ipTM=0.317 tol=5.2
2024-07-12 14:55:19,096 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=59.1 pTM=0.531 ipTM=0.367 tol=5.08
2024-07-12 14:58:18,934 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=59.1 pTM=0.529 ipTM=0.333 tol=3.29
2024-07-12 15:01:18,706 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=59.2 pTM=0.527 ipTM=0.314 tol=4.81
2024-07-12 15:04:18,513 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=59 pTM=0.526 ipTM=0.281 tol=3.47
2024-07-12 15:07:18,335 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=58.9 pTM=0.526 ipTM=0.249 tol=4.46
2024-07-12 15:10:18,079 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=59.2 pTM=0.531 ipTM=0.319 tol=3.03
2024-07-12 15:13:17,815 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=59.8 pTM=0.538 ipTM=0.418 tol=6.06
2024-07-12 15:16:17,611 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=59.7 pTM=0.538 ipTM=0.423 tol=3.43
2024-07-12 15:19:17,355 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=59.8 pTM=0.536 ipTM=0.402 tol=2.98
2024-07-12 15:22:17,095 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=59.3 pTM=0.536 ipTM=0.422 tol=6.92
2024-07-12 15:25:16,808 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=59.2 pTM=0.537 ipTM=0.424 tol=4.72
2024-07-12 15:28:16,548 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=59.4 pTM=0.537 ipTM=0.413 tol=2.3
2024-07-12 15:31:16,343 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=59.3 pTM=0.533 ipTM=0.366 tol=2.98
2024-07-12 15:34:16,170 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=59.6 pTM=0.535 ipTM=0.412 tol=3.28
2024-07-12 15:37:15,959 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=59.5 pTM=0.537 ipTM=0.421 tol=3.25
2024-07-12 15:40:15,760 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=59.5 pTM=0.535 ipTM=0.409 tol=2.36
2024-07-12 15:43:15,571 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=59.1 pTM=0.534 ipTM=0.386 tol=2.98
2024-07-12 15:46:15,453 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=59.7 pTM=0.536 ipTM=0.418 tol=7.33
2024-07-12 15:49:15,282 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=59.8 pTM=0.535 ipTM=0.417 tol=2.06
2024-07-12 15:52:15,151 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=59.9 pTM=0.537 ipTM=0.43 tol=4.85
2024-07-12 15:55:15,006 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=60 pTM=0.538 ipTM=0.426 tol=2.27
2024-07-12 15:58:14,819 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=59.6 pTM=0.536 ipTM=0.435 tol=8.02
2024-07-12 16:01:14,616 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=59.9 pTM=0.537 ipTM=0.448 tol=2.69
2024-07-12 16:04:14,522 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=59.9 pTM=0.537 ipTM=0.426 tol=4.02
2024-07-12 16:07:14,366 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=59.7 pTM=0.535 ipTM=0.415 tol=3.37
2024-07-12 16:10:14,164 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=59.7 pTM=0.535 ipTM=0.434 tol=5.24
2024-07-12 16:13:13,983 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=59.4 pTM=0.534 ipTM=0.393 tol=5.29
2024-07-12 16:16:13,762 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=59.7 pTM=0.536 ipTM=0.43 tol=4
2024-07-12 16:16:13,764 alphafold2_multimer_v3_model_5_seed_000 took 5574.3s (30 recycles)
2024-07-12 16:16:16,304 reranking models by 'multimer' metric
2024-07-12 16:16:29,285 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 16:23:09,340 Relaxation took 413.0s
2024-07-12 16:23:09,340 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=62.6 pTM=0.555 ipTM=0.598
2024-07-12 16:30:01,674 Relaxation took 412.3s
2024-07-12 16:30:01,675 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=59.7 pTM=0.536 ipTM=0.43
2024-07-12 16:37:39,615 Relaxation took 457.9s
2024-07-12 16:37:39,615 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=61.5 pTM=0.531 ipTM=0.392
2024-07-12 16:44:51,998 Relaxation took 432.4s
2024-07-12 16:44:51,998 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=61.1 pTM=0.54 ipTM=0.362
2024-07-12 16:49:29,711 Relaxation took 277.7s
2024-07-12 16:49:29,711 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=59.8 pTM=0.521 ipTM=0.275
2024-07-12 16:49:42,110 Done