2024-07-12 08:31:34,642 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-12 08:31:34,955 Running on GPU 2024-07-12 08:31:51,638 Found 6 citations for tools or databases 2024-07-12 08:31:51,638 Query 1/1: PLXA3_AASD1 (length 2283) 2024-07-12 08:31:52,173 Sleeping for 10s. Reason: PENDING 2024-07-12 08:32:02,596 Sleeping for 8s. Reason: RUNNING 2024-07-12 08:32:11,001 Sleeping for 8s. Reason: RUNNING 2024-07-12 08:32:19,438 Sleeping for 6s. Reason: RUNNING 2024-07-12 08:32:25,908 Sleeping for 5s. Reason: RUNNING 2024-07-12 08:32:31,353 Sleeping for 10s. Reason: RUNNING 2024-07-12 08:32:41,789 Sleeping for 7s. Reason: RUNNING 2024-07-12 08:32:49,260 Sleeping for 10s. Reason: RUNNING 2024-07-12 08:32:59,720 Sleeping for 10s. Reason: RUNNING 2024-07-12 08:33:10,152 Sleeping for 5s. Reason: RUNNING 2024-07-12 08:33:15,598 Sleeping for 6s. Reason: RUNNING 2024-07-12 08:33:22,013 Sleeping for 8s. Reason: RUNNING 2024-07-12 08:33:30,449 Sleeping for 5s. Reason: RUNNING 2024-07-12 08:33:35,860 Sleeping for 5s. Reason: RUNNING 2024-07-12 08:33:41,282 Sleeping for 10s. Reason: RUNNING 2024-07-12 08:33:51,716 Sleeping for 10s. Reason: RUNNING 2024-07-12 08:34:02,183 Sleeping for 7s. Reason: RUNNING 2024-07-12 08:34:09,642 Sleeping for 9s. Reason: RUNNING 2024-07-12 08:34:19,080 Sleeping for 7s. Reason: RUNNING 2024-07-12 08:34:26,504 Sleeping for 10s. Reason: RUNNING 2024-07-12 08:34:36,931 Sleeping for 10s. Reason: RUNNING 2024-07-12 08:34:47,392 Sleeping for 5s. Reason: RUNNING 2024-07-12 08:34:52,813 Sleeping for 6s. Reason: RUNNING 2024-07-12 08:34:59,219 Sleeping for 9s. Reason: RUNNING 2024-07-12 08:35:08,644 Sleeping for 6s. Reason: RUNNING 2024-07-12 08:35:15,070 Sleeping for 7s. Reason: RUNNING 2024-07-12 08:35:24,397 Sleeping for 8s. Reason: PENDING 2024-07-12 08:35:32,837 Sleeping for 8s. Reason: RUNNING 2024-07-12 08:35:41,270 Sleeping for 10s. Reason: RUNNING 2024-07-12 08:35:51,747 Sleeping for 8s. Reason: RUNNING 2024-07-12 08:36:00,196 Sleeping for 6s. Reason: RUNNING 2024-07-12 08:36:06,631 Sleeping for 10s. Reason: RUNNING 2024-07-12 08:36:17,074 Sleeping for 6s. Reason: RUNNING 2024-07-12 08:36:23,513 Sleeping for 5s. Reason: RUNNING 2024-07-12 08:36:28,920 Sleeping for 5s. Reason: RUNNING 2024-07-12 08:36:34,367 Sleeping for 9s. Reason: RUNNING 2024-07-12 08:36:43,793 Sleeping for 5s. Reason: RUNNING 2024-07-12 08:36:49,228 Sleeping for 10s. Reason: RUNNING 2024-07-12 08:36:59,646 Sleeping for 6s. Reason: RUNNING 2024-07-12 08:37:06,059 Sleeping for 6s. Reason: RUNNING 2024-07-12 08:37:12,475 Sleeping for 5s. Reason: RUNNING 2024-07-12 08:37:17,908 Sleeping for 9s. Reason: RUNNING 2024-07-12 08:37:27,324 Sleeping for 5s. Reason: RUNNING 2024-07-12 08:37:32,754 Sleeping for 5s. Reason: RUNNING 2024-07-12 08:37:38,176 Sleeping for 9s. Reason: RUNNING 2024-07-12 08:37:47,612 Sleeping for 10s. Reason: RUNNING 2024-07-12 08:38:02,775 Setting max_seq=508, max_extra_seq=2048 2024-07-12 08:45:22,251 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=76.2 pTM=0.388 ipTM=0.208 2024-07-12 08:49:10,231 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=78.7 pTM=0.394 ipTM=0.21 tol=11.8 2024-07-12 08:52:58,037 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=78.9 pTM=0.395 ipTM=0.215 tol=5.49 2024-07-12 08:56:45,743 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=77.2 pTM=0.399 ipTM=0.232 tol=10.5 2024-07-12 09:00:33,436 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=78 pTM=0.398 ipTM=0.235 tol=9.62 2024-07-12 09:04:21,104 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=77.9 pTM=0.397 ipTM=0.233 tol=3.03 2024-07-12 09:08:08,829 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=77.6 pTM=0.398 ipTM=0.234 tol=11.9 2024-07-12 09:11:56,531 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=77.9 pTM=0.398 ipTM=0.231 tol=10.8 2024-07-12 09:15:44,362 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=77.6 pTM=0.396 ipTM=0.23 tol=14 2024-07-12 09:19:32,183 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=77.5 pTM=0.395 ipTM=0.224 tol=3.17 2024-07-12 09:23:19,912 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=77.5 pTM=0.396 ipTM=0.227 tol=3.1 2024-07-12 09:27:07,583 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=77.5 pTM=0.395 ipTM=0.223 tol=3.51 2024-07-12 09:30:55,105 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=78.1 pTM=0.394 ipTM=0.218 tol=4.86 2024-07-12 09:34:42,645 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=78.2 pTM=0.395 ipTM=0.215 tol=3.57 2024-07-12 09:38:30,186 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=78.2 pTM=0.395 ipTM=0.214 tol=3.97 2024-07-12 09:42:17,637 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=78.1 pTM=0.396 ipTM=0.217 tol=3.13 2024-07-12 09:46:05,142 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=78.4 pTM=0.396 ipTM=0.214 tol=2.2 2024-07-12 09:49:52,692 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=78.4 pTM=0.396 ipTM=0.216 tol=1.82 2024-07-12 09:53:40,251 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=78.6 pTM=0.396 ipTM=0.216 tol=1.87 2024-07-12 09:57:27,725 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=78.5 pTM=0.396 ipTM=0.216 tol=1.26 2024-07-12 10:01:15,080 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=78.5 pTM=0.396 ipTM=0.215 tol=1.02 2024-07-12 10:05:02,540 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=78.8 pTM=0.396 ipTM=0.216 tol=0.85 2024-07-12 10:08:50,056 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=78.8 pTM=0.396 ipTM=0.216 tol=0.851 2024-07-12 10:12:37,707 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=78.2 pTM=0.396 ipTM=0.215 tol=0.688 2024-07-12 10:16:25,347 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=78.4 pTM=0.396 ipTM=0.217 tol=0.703 2024-07-12 10:20:12,725 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=78.4 pTM=0.397 ipTM=0.217 tol=0.731 2024-07-12 10:24:00,045 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=78.3 pTM=0.397 ipTM=0.217 tol=0.587 2024-07-12 10:27:47,453 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=78.3 pTM=0.396 ipTM=0.217 tol=0.645 2024-07-12 10:31:34,843 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=78.2 pTM=0.396 ipTM=0.218 tol=0.534 2024-07-12 10:35:22,274 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=78.5 pTM=0.397 ipTM=0.217 tol=0.992 2024-07-12 10:39:09,641 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=78.4 pTM=0.397 ipTM=0.217 tol=0.884 2024-07-12 10:39:09,644 alphafold2_multimer_v3_model_1_seed_000 took 7231.7s (30 recycles) 2024-07-12 10:43:00,548 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=76.2 pTM=0.411 ipTM=0.213 2024-07-12 10:46:48,699 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=78.2 pTM=0.418 ipTM=0.22 tol=16 2024-07-12 10:50:36,798 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=79.1 pTM=0.423 ipTM=0.232 tol=7.46 2024-07-12 10:54:24,491 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=79.1 pTM=0.425 ipTM=0.23 tol=3.54 2024-07-12 10:58:12,065 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=79.4 pTM=0.423 ipTM=0.234 tol=1.87 2024-07-12 11:01:59,632 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=79.5 pTM=0.422 ipTM=0.233 tol=1.71 2024-07-12 11:05:47,213 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=79.7 pTM=0.423 ipTM=0.235 tol=1.08 2024-07-12 11:09:34,841 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=79.5 pTM=0.42 ipTM=0.233 tol=0.882 2024-07-12 11:13:22,632 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=79.5 pTM=0.418 ipTM=0.229 tol=0.847 2024-07-12 11:17:10,374 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=79.5 pTM=0.417 ipTM=0.229 tol=0.771 2024-07-12 11:20:58,070 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=79.9 pTM=0.423 ipTM=0.231 tol=0.77 2024-07-12 11:24:45,778 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=79.7 pTM=0.42 ipTM=0.228 tol=0.611 2024-07-12 11:28:33,551 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=79.9 pTM=0.422 ipTM=0.229 tol=0.667 2024-07-12 11:32:21,248 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=79.6 pTM=0.419 ipTM=0.228 tol=0.899 2024-07-12 11:36:08,946 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=79.7 pTM=0.418 ipTM=0.226 tol=0.736 2024-07-12 11:39:56,592 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=79.8 pTM=0.422 ipTM=0.23 tol=0.799 2024-07-12 11:43:44,171 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=79.7 pTM=0.42 ipTM=0.228 tol=1.98 2024-07-12 11:47:31,731 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=79.6 pTM=0.419 ipTM=0.228 tol=1.38 2024-07-12 11:51:19,482 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=79.8 pTM=0.422 ipTM=0.23 tol=0.748 2024-07-12 11:55:07,190 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=79.8 pTM=0.424 ipTM=0.23 tol=0.517 2024-07-12 11:58:54,843 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=79.7 pTM=0.423 ipTM=0.231 tol=0.623 2024-07-12 12:02:42,502 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=79.7 pTM=0.422 ipTM=0.229 tol=0.491 2024-07-12 12:02:42,505 alphafold2_multimer_v3_model_2_seed_000 took 5009.9s (21 recycles) 2024-07-12 12:06:34,125 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=76.4 pTM=0.394 ipTM=0.197 2024-07-12 12:10:22,323 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=78.7 pTM=0.404 ipTM=0.204 tol=14.8 2024-07-12 12:14:10,398 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=79.4 pTM=0.405 ipTM=0.212 tol=7.18 2024-07-12 12:17:58,504 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=79.2 pTM=0.402 ipTM=0.208 tol=6.91 2024-07-12 12:21:46,538 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=79.4 pTM=0.403 ipTM=0.213 tol=3.37 2024-07-12 12:25:34,525 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=79.6 pTM=0.402 ipTM=0.21 tol=1.26 2024-07-12 12:29:22,378 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=79.6 pTM=0.403 ipTM=0.218 tol=2.01 2024-07-12 12:33:10,190 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=79.6 pTM=0.402 ipTM=0.216 tol=0.973 2024-07-12 12:36:57,922 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=79.6 pTM=0.402 ipTM=0.219 tol=1.68 2024-07-12 12:40:45,681 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=79.8 pTM=0.403 ipTM=0.216 tol=1.17 2024-07-12 12:44:33,434 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=80.1 pTM=0.405 ipTM=0.218 tol=0.95 2024-07-12 12:48:21,160 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=79.9 pTM=0.404 ipTM=0.218 tol=1.14 2024-07-12 12:52:08,951 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=80 pTM=0.403 ipTM=0.215 tol=1.22 2024-07-12 12:55:56,896 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=79.6 pTM=0.402 ipTM=0.216 tol=0.999 2024-07-12 12:59:44,772 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=79.8 pTM=0.403 ipTM=0.217 tol=1.7 2024-07-12 13:03:32,570 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=79.8 pTM=0.403 ipTM=0.219 tol=1.42 2024-07-12 13:07:20,337 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=79.4 pTM=0.402 ipTM=0.216 tol=1.89 2024-07-12 13:11:08,177 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=79.6 pTM=0.403 ipTM=0.215 tol=1.4 2024-07-12 13:14:56,023 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=79.4 pTM=0.402 ipTM=0.215 tol=1.81 2024-07-12 13:18:43,893 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=79.4 pTM=0.403 ipTM=0.214 tol=1.63 2024-07-12 13:22:31,733 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=79.6 pTM=0.404 ipTM=0.218 tol=1.79 2024-07-12 13:26:19,557 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=79.6 pTM=0.404 ipTM=0.218 tol=2.55 2024-07-12 13:30:07,404 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=79.5 pTM=0.405 ipTM=0.217 tol=1.54 2024-07-12 13:33:55,333 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=79.4 pTM=0.404 ipTM=0.217 tol=1.79 2024-07-12 13:37:43,278 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=79.4 pTM=0.404 ipTM=0.218 tol=1.2 2024-07-12 13:41:31,198 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=79.4 pTM=0.404 ipTM=0.217 tol=1.28 2024-07-12 13:45:19,054 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=79.4 pTM=0.404 ipTM=0.217 tol=1.94 2024-07-12 13:49:06,905 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=79.2 pTM=0.405 ipTM=0.216 tol=2.04 2024-07-12 13:52:54,735 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=79.1 pTM=0.404 ipTM=0.216 tol=1.41 2024-07-12 13:56:42,521 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=79.3 pTM=0.405 ipTM=0.218 tol=0.815 2024-07-12 14:00:30,424 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=79.1 pTM=0.405 ipTM=0.217 tol=1.04 2024-07-12 14:00:30,427 alphafold2_multimer_v3_model_3_seed_000 took 7064.7s (30 recycles) 2024-07-12 14:04:21,955 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=75.1 pTM=0.391 ipTM=0.197 2024-07-12 14:08:10,182 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=76.9 pTM=0.401 ipTM=0.199 tol=8.65 2024-07-12 14:11:58,308 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=77.7 pTM=0.408 ipTM=0.221 tol=11.3 2024-07-12 14:15:46,216 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=77.6 pTM=0.411 ipTM=0.23 tol=5.11 2024-07-12 14:19:34,111 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=77.6 pTM=0.409 ipTM=0.228 tol=4.2 2024-07-12 14:23:22,011 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=77.7 pTM=0.412 ipTM=0.227 tol=2.82 2024-07-12 14:27:09,905 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=77.6 pTM=0.41 ipTM=0.218 tol=1.9 2024-07-12 14:30:57,703 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=77.6 pTM=0.411 ipTM=0.227 tol=1.51 2024-07-12 14:34:45,544 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=77.4 pTM=0.409 ipTM=0.219 tol=2.59 2024-07-12 14:38:33,310 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=77.8 pTM=0.413 ipTM=0.234 tol=2.44 2024-07-12 14:42:21,134 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=77.9 pTM=0.413 ipTM=0.219 tol=2.96 2024-07-12 14:46:09,115 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=77.6 pTM=0.412 ipTM=0.233 tol=2.35 2024-07-12 14:49:57,102 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=78.1 pTM=0.412 ipTM=0.229 tol=1.96 2024-07-12 14:53:45,146 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=77.9 pTM=0.412 ipTM=0.237 tol=1.4 2024-07-12 14:57:33,055 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=78.2 pTM=0.413 ipTM=0.228 tol=1.47 2024-07-12 15:01:20,840 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=78.2 pTM=0.415 ipTM=0.246 tol=2.33 2024-07-12 15:05:08,750 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=78.1 pTM=0.413 ipTM=0.231 tol=2.43 2024-07-12 15:08:56,586 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=78 pTM=0.412 ipTM=0.24 tol=3.43 2024-07-12 15:12:44,430 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=78.2 pTM=0.414 ipTM=0.234 tol=2.95 2024-07-12 15:16:32,327 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=78.3 pTM=0.415 ipTM=0.243 tol=3.61 2024-07-12 15:20:20,070 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=78.6 pTM=0.416 ipTM=0.242 tol=3.68 2024-07-12 15:24:07,626 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=78.5 pTM=0.418 ipTM=0.256 tol=3.21 2024-07-12 15:27:55,243 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=78.8 pTM=0.418 ipTM=0.255 tol=1.15 2024-07-12 15:31:42,838 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=78.6 pTM=0.418 ipTM=0.257 tol=0.747 2024-07-12 15:35:30,381 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=78.8 pTM=0.418 ipTM=0.248 tol=0.704 2024-07-12 15:39:18,055 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=78.7 pTM=0.419 ipTM=0.256 tol=1.4 2024-07-12 15:43:05,630 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=78.4 pTM=0.416 ipTM=0.238 tol=1.97 2024-07-12 15:46:53,120 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=78.6 pTM=0.42 ipTM=0.26 tol=1.81 2024-07-12 15:50:40,637 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=78.7 pTM=0.418 ipTM=0.246 tol=1.67 2024-07-12 15:54:28,147 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=78.8 pTM=0.42 ipTM=0.263 tol=0.823 2024-07-12 15:58:15,699 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=78.6 pTM=0.418 ipTM=0.246 tol=1.78 2024-07-12 15:58:15,702 alphafold2_multimer_v3_model_4_seed_000 took 7062.3s (30 recycles) 2024-07-12 16:02:06,791 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=73.7 pTM=0.393 ipTM=0.206 2024-07-12 16:05:54,455 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=75.8 pTM=0.404 ipTM=0.213 tol=16 2024-07-12 16:09:42,179 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=77.1 pTM=0.409 ipTM=0.216 tol=10.5 2024-07-12 16:13:29,886 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=78.5 pTM=0.41 ipTM=0.22 tol=7.15 2024-07-12 16:17:17,550 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=78.8 pTM=0.411 ipTM=0.237 tol=5.97 2024-07-12 16:21:05,177 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=79.1 pTM=0.413 ipTM=0.236 tol=2.91 2024-07-12 16:24:52,815 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=79.2 pTM=0.412 ipTM=0.24 tol=2.3 2024-07-12 16:28:40,297 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=79.3 pTM=0.415 ipTM=0.244 tol=2.4 2024-07-12 16:32:27,799 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=79.4 pTM=0.415 ipTM=0.247 tol=1.55 2024-07-12 16:36:15,273 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=79.3 pTM=0.416 ipTM=0.249 tol=1.5 2024-07-12 16:40:02,714 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=79.6 pTM=0.418 ipTM=0.249 tol=1.35 2024-07-12 16:43:50,272 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=79.2 pTM=0.415 ipTM=0.243 tol=1.68 2024-07-12 16:47:37,789 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=79.2 pTM=0.415 ipTM=0.239 tol=1.81 2024-07-12 16:51:25,334 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=78.9 pTM=0.413 ipTM=0.237 tol=1.66 2024-07-12 16:55:12,905 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=79.1 pTM=0.413 ipTM=0.238 tol=1.96 2024-07-12 16:59:00,411 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=78.9 pTM=0.413 ipTM=0.24 tol=2.18 2024-07-12 17:02:47,877 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=78.6 pTM=0.413 ipTM=0.237 tol=2.66 2024-07-12 17:06:35,317 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=78.6 pTM=0.412 ipTM=0.235 tol=2.16 2024-07-12 17:10:22,788 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=78.7 pTM=0.412 ipTM=0.235 tol=1.95 2024-07-12 17:14:10,200 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=78.6 pTM=0.415 ipTM=0.235 tol=2.21 2024-07-12 17:17:57,548 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=78.8 pTM=0.414 ipTM=0.236 tol=1.84 2024-07-12 17:21:45,062 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=78.9 pTM=0.417 ipTM=0.234 tol=1.8 2024-07-12 17:25:32,476 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=78.9 pTM=0.417 ipTM=0.232 tol=1.32 2024-07-12 17:29:19,836 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=78.7 pTM=0.415 ipTM=0.23 tol=1.4 2024-07-12 17:33:07,206 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=78.8 pTM=0.415 ipTM=0.231 tol=1.19 2024-07-12 17:36:54,703 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=78.6 pTM=0.415 ipTM=0.229 tol=1.3 2024-07-12 17:40:42,233 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=78.8 pTM=0.415 ipTM=0.228 tol=1.3 2024-07-12 17:44:29,808 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=78.8 pTM=0.414 ipTM=0.226 tol=1.38 2024-07-12 17:48:17,254 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=78.5 pTM=0.412 ipTM=0.227 tol=1.47 2024-07-12 17:52:04,653 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=78.8 pTM=0.412 ipTM=0.224 tol=1.31 2024-07-12 17:55:52,030 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=78.7 pTM=0.412 ipTM=0.225 tol=1.23 2024-07-12 17:55:52,033 alphafold2_multimer_v3_model_5_seed_000 took 7053.3s (30 recycles) 2024-07-12 17:55:55,018 reranking models by 'multimer' metric 2024-07-12 17:55:59,111 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-12 18:00:48,603 Relaxation took 293.6s 2024-07-12 18:00:48,603 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=78.6 pTM=0.418 ipTM=0.246 2024-07-12 18:11:35,310 Relaxation took 646.7s 2024-07-12 18:11:35,311 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=79.7 pTM=0.422 ipTM=0.229 2024-07-12 18:22:24,635 Relaxation took 649.3s 2024-07-12 18:22:24,636 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=78.7 pTM=0.412 ipTM=0.225 2024-07-12 18:28:35,289 Relaxation took 370.7s 2024-07-12 18:28:35,289 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=79.1 pTM=0.405 ipTM=0.217 2024-07-12 18:35:55,500 Relaxation took 440.2s 2024-07-12 18:35:55,501 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=78.4 pTM=0.397 ipTM=0.217 2024-07-12 18:36:13,128 Done