2024-07-12 08:35:04,725 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 08:35:05,044 Running on GPU
2024-07-12 08:35:16,327 Found 6 citations for tools or databases
2024-07-12 08:35:16,327 Query 1/1: PMA6E_JAK3 (length 1771)
2024-07-12 08:35:16,800 Sleeping for 6s. Reason: PENDING
2024-07-12 08:35:23,235 Sleeping for 9s. Reason: RUNNING
2024-07-12 08:35:32,681 Sleeping for 7s. Reason: RUNNING
2024-07-12 08:35:40,094 Sleeping for 5s. Reason: RUNNING
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2024-07-12 08:36:10,807 Sleeping for 8s. Reason: RUNNING
2024-07-12 08:36:19,228 Sleeping for 10s. Reason: RUNNING
2024-07-12 08:36:29,651 Sleeping for 10s. Reason: RUNNING
2024-07-12 08:36:40,083 Sleeping for 7s. Reason: RUNNING
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2024-07-12 08:37:58,396 Sleeping for 10s. Reason: RUNNING
2024-07-12 08:38:08,862 Sleeping for 10s. Reason: RUNNING
2024-07-12 08:38:19,304 Sleeping for 10s. Reason: RUNNING
2024-07-12 08:38:33,425 Sleeping for 7s. Reason: PENDING
2024-07-12 08:38:40,867 Sleeping for 9s. Reason: RUNNING
2024-07-12 08:38:50,288 Sleeping for 6s. Reason: RUNNING
2024-07-12 08:38:56,714 Sleeping for 5s. Reason: RUNNING
2024-07-12 08:39:02,152 Sleeping for 9s. Reason: RUNNING
2024-07-12 08:39:11,591 Sleeping for 6s. Reason: RUNNING
2024-07-12 08:39:18,012 Sleeping for 6s. Reason: RUNNING
2024-07-12 08:39:24,429 Sleeping for 7s. Reason: RUNNING
2024-07-12 08:39:31,855 Sleeping for 5s. Reason: RUNNING
2024-07-12 08:39:37,308 Sleeping for 5s. Reason: RUNNING
2024-07-12 08:39:42,727 Sleeping for 6s. Reason: RUNNING
2024-07-12 08:39:49,147 Sleeping for 5s. Reason: RUNNING
2024-07-12 08:39:54,605 Sleeping for 5s. Reason: RUNNING
2024-07-12 08:40:00,040 Sleeping for 9s. Reason: RUNNING
2024-07-12 08:40:09,477 Sleeping for 8s. Reason: RUNNING
2024-07-12 08:40:17,889 Sleeping for 10s. Reason: RUNNING
2024-07-12 08:40:28,319 Sleeping for 5s. Reason: RUNNING
2024-07-12 08:40:33,736 Sleeping for 6s. Reason: RUNNING
2024-07-12 08:40:40,152 Sleeping for 7s. Reason: RUNNING
2024-07-12 08:40:47,572 Sleeping for 7s. Reason: RUNNING
2024-07-12 08:40:55,014 Sleeping for 6s. Reason: RUNNING
2024-07-12 08:41:01,439 Sleeping for 9s. Reason: RUNNING
2024-07-12 08:41:10,856 Sleeping for 5s. Reason: RUNNING
2024-07-12 08:41:16,269 Sleeping for 5s. Reason: RUNNING
2024-07-12 08:41:21,676 Sleeping for 6s. Reason: RUNNING
2024-07-12 08:41:28,095 Sleeping for 8s. Reason: RUNNING
2024-07-12 08:41:36,538 Sleeping for 10s. Reason: RUNNING
2024-07-12 08:41:46,961 Sleeping for 6s. Reason: RUNNING
2024-07-12 08:41:53,392 Sleeping for 6s. Reason: RUNNING
2024-07-12 08:42:06,070 Setting max_seq=508, max_extra_seq=2048
2024-07-12 08:46:43,027 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=64 pTM=0.589 ipTM=0.183
2024-07-12 08:48:31,704 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.6 pTM=0.615 ipTM=0.389 tol=15.2
2024-07-12 08:50:20,438 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=65.2 pTM=0.624 ipTM=0.412 tol=8.65
2024-07-12 08:52:09,129 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=64.9 pTM=0.623 ipTM=0.357 tol=4.98
2024-07-12 08:53:57,786 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=64.9 pTM=0.618 ipTM=0.366 tol=3.7
2024-07-12 08:55:46,483 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=65 pTM=0.615 ipTM=0.342 tol=2.83
2024-07-12 08:57:35,198 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=65.1 pTM=0.613 ipTM=0.33 tol=2.89
2024-07-12 08:59:23,876 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64.8 pTM=0.61 ipTM=0.315 tol=2.54
2024-07-12 09:01:12,546 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=65 pTM=0.612 ipTM=0.324 tol=2.17
2024-07-12 09:03:01,167 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.9 pTM=0.614 ipTM=0.366 tol=2.49
2024-07-12 09:04:49,833 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64.9 pTM=0.611 ipTM=0.354 tol=2.95
2024-07-12 09:06:38,524 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=65.1 pTM=0.615 ipTM=0.371 tol=2.95
2024-07-12 09:08:27,256 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=65.1 pTM=0.61 ipTM=0.354 tol=3.37
2024-07-12 09:10:15,984 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64.8 pTM=0.61 ipTM=0.36 tol=3.56
2024-07-12 09:12:04,678 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=65 pTM=0.612 ipTM=0.376 tol=2.09
2024-07-12 09:13:53,372 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=65.1 pTM=0.612 ipTM=0.394 tol=1.54
2024-07-12 09:15:42,074 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=65 pTM=0.612 ipTM=0.409 tol=1.78
2024-07-12 09:17:30,788 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=65 pTM=0.613 ipTM=0.396 tol=1.31
2024-07-12 09:19:19,481 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=65.1 pTM=0.613 ipTM=0.454 tol=1.65
2024-07-12 09:21:08,168 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=65.2 pTM=0.615 ipTM=0.453 tol=1.49
2024-07-12 09:22:56,846 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=64.9 pTM=0.612 ipTM=0.457 tol=1.45
2024-07-12 09:24:45,492 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=65.2 pTM=0.617 ipTM=0.451 tol=1.55
2024-07-12 09:26:34,112 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=65.2 pTM=0.614 ipTM=0.404 tol=2.42
2024-07-12 09:28:22,794 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=65.1 pTM=0.615 ipTM=0.391 tol=2.15
2024-07-12 09:30:11,441 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=65.1 pTM=0.614 ipTM=0.43 tol=2.1
2024-07-12 09:32:00,120 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.9 pTM=0.613 ipTM=0.431 tol=1.9
2024-07-12 09:33:48,839 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=65.1 pTM=0.61 ipTM=0.414 tol=1.67
2024-07-12 09:35:37,529 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=64.8 pTM=0.61 ipTM=0.416 tol=1.61
2024-07-12 09:37:26,244 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=65.1 pTM=0.611 ipTM=0.385 tol=2.24
2024-07-12 09:39:14,957 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=64.8 pTM=0.611 ipTM=0.394 tol=3.02
2024-07-12 09:41:03,711 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=65.2 pTM=0.613 ipTM=0.345 tol=3.48
2024-07-12 09:41:03,712 alphafold2_multimer_v3_model_1_seed_000 took 3534.0s (30 recycles)
2024-07-12 09:42:54,558 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=64.1 pTM=0.595 ipTM=0.201
2024-07-12 09:44:43,373 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=65.1 pTM=0.614 ipTM=0.421 tol=21.8
2024-07-12 09:46:32,253 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=65.9 pTM=0.626 ipTM=0.376 tol=10.4
2024-07-12 09:48:21,126 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=65.9 pTM=0.627 ipTM=0.398 tol=6.75
2024-07-12 09:50:10,086 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=66 pTM=0.625 ipTM=0.439 tol=4.24
2024-07-12 09:51:59,060 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=65.9 pTM=0.623 ipTM=0.412 tol=3.06
2024-07-12 09:53:48,043 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=65.9 pTM=0.623 ipTM=0.4 tol=3.02
2024-07-12 09:55:37,056 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=65.8 pTM=0.615 ipTM=0.203 tol=4.28
2024-07-12 09:57:26,063 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=65.8 pTM=0.619 ipTM=0.241 tol=4.47
2024-07-12 09:59:14,933 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=66.2 pTM=0.625 ipTM=0.453 tol=5.57
2024-07-12 10:01:03,848 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=66.4 pTM=0.629 ipTM=0.509 tol=5.29
2024-07-12 10:02:52,726 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=66.4 pTM=0.629 ipTM=0.5 tol=5.67
2024-07-12 10:04:41,608 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=66.3 pTM=0.627 ipTM=0.503 tol=3.18
2024-07-12 10:06:30,477 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=66.2 pTM=0.627 ipTM=0.478 tol=2.52
2024-07-12 10:08:19,300 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=66.2 pTM=0.627 ipTM=0.448 tol=2.23
2024-07-12 10:10:08,122 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=66.1 pTM=0.625 ipTM=0.425 tol=2.06
2024-07-12 10:11:56,969 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=66 pTM=0.624 ipTM=0.411 tol=1.73
2024-07-12 10:13:45,832 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=65.9 pTM=0.622 ipTM=0.315 tol=1.71
2024-07-12 10:15:34,694 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=66 pTM=0.619 ipTM=0.272 tol=4.33
2024-07-12 10:17:23,571 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=66.1 pTM=0.624 ipTM=0.309 tol=4.05
2024-07-12 10:19:12,427 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=65.8 pTM=0.624 ipTM=0.363 tol=1.95
2024-07-12 10:21:01,294 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=65.9 pTM=0.618 ipTM=0.204 tol=3.2
2024-07-12 10:22:50,150 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=65.8 pTM=0.623 ipTM=0.331 tol=3.53
2024-07-12 10:24:38,983 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=66.4 pTM=0.632 ipTM=0.513 tol=4.41
2024-07-12 10:26:27,830 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=66.9 pTM=0.644 ipTM=0.583 tol=4.69
2024-07-12 10:28:16,631 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=66.7 pTM=0.64 ipTM=0.583 tol=2.02
2024-07-12 10:30:05,443 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=66.6 pTM=0.636 ipTM=0.576 tol=2.77
2024-07-12 10:31:54,288 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=66.5 pTM=0.636 ipTM=0.587 tol=1.67
2024-07-12 10:33:43,131 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=66.9 pTM=0.641 ipTM=0.621 tol=1.17
2024-07-12 10:35:31,964 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=66.8 pTM=0.638 ipTM=0.625 tol=1.54
2024-07-12 10:37:20,825 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=66.7 pTM=0.635 ipTM=0.618 tol=3.03
2024-07-12 10:37:20,826 alphafold2_multimer_v3_model_2_seed_000 took 3375.3s (30 recycles)
2024-07-12 10:39:11,666 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=64 pTM=0.585 ipTM=0.206
2024-07-12 10:41:00,535 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=65.1 pTM=0.616 ipTM=0.552 tol=27
2024-07-12 10:42:49,413 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=65.4 pTM=0.626 ipTM=0.459 tol=7.9
2024-07-12 10:44:38,263 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=65.1 pTM=0.623 ipTM=0.411 tol=6.9
2024-07-12 10:46:27,082 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=65 pTM=0.625 ipTM=0.393 tol=6
2024-07-12 10:48:15,921 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=65.2 pTM=0.626 ipTM=0.411 tol=5.36
2024-07-12 10:50:04,801 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=65 pTM=0.623 ipTM=0.332 tol=4.64
2024-07-12 10:51:53,659 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=64.6 pTM=0.62 ipTM=0.327 tol=6.82
2024-07-12 10:53:42,551 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=64.8 pTM=0.624 ipTM=0.267 tol=3.31
2024-07-12 10:55:31,341 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=64.4 pTM=0.619 ipTM=0.247 tol=4.77
2024-07-12 10:57:20,186 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=64.5 pTM=0.62 ipTM=0.222 tol=4.79
2024-07-12 10:59:09,025 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=64.7 pTM=0.625 ipTM=0.228 tol=6.21
2024-07-12 11:00:57,943 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=64.2 pTM=0.617 ipTM=0.208 tol=4.66
2024-07-12 11:02:46,753 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=64.3 pTM=0.614 ipTM=0.2 tol=2.78
2024-07-12 11:04:35,500 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=64.5 pTM=0.621 ipTM=0.248 tol=3.43
2024-07-12 11:06:24,282 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=64.8 pTM=0.622 ipTM=0.246 tol=2.56
2024-07-12 11:08:13,160 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=64.6 pTM=0.62 ipTM=0.213 tol=2.15
2024-07-12 11:10:02,027 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=64.2 pTM=0.618 ipTM=0.208 tol=3
2024-07-12 11:11:50,999 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=64.5 pTM=0.615 ipTM=0.197 tol=3.96
2024-07-12 11:13:39,949 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=64.5 pTM=0.617 ipTM=0.2 tol=3.63
2024-07-12 11:15:28,936 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=64.4 pTM=0.611 ipTM=0.19 tol=3.24
2024-07-12 11:17:17,904 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=64.4 pTM=0.615 ipTM=0.214 tol=2.73
2024-07-12 11:19:06,974 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=64.6 pTM=0.608 ipTM=0.184 tol=4.98
2024-07-12 11:20:56,128 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=64.9 pTM=0.609 ipTM=0.183 tol=3.7
2024-07-12 11:22:45,197 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=65.1 pTM=0.611 ipTM=0.184 tol=5.36
2024-07-12 11:24:34,246 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=64.9 pTM=0.609 ipTM=0.184 tol=4.04
2024-07-12 11:26:23,244 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=64.9 pTM=0.607 ipTM=0.191 tol=6.35
2024-07-12 11:28:12,271 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=64 pTM=0.607 ipTM=0.186 tol=23
2024-07-12 11:30:01,267 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=64.4 pTM=0.613 ipTM=0.198 tol=6.59
2024-07-12 11:31:50,267 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=64.4 pTM=0.613 ipTM=0.199 tol=6.05
2024-07-12 11:33:39,303 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=64.5 pTM=0.615 ipTM=0.202 tol=4.81
2024-07-12 11:33:39,305 alphafold2_multimer_v3_model_3_seed_000 took 3376.6s (30 recycles)
2024-07-12 11:35:30,154 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=64.5 pTM=0.619 ipTM=0.321
2024-07-12 11:37:19,172 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=65.4 pTM=0.634 ipTM=0.513 tol=11.3
2024-07-12 11:39:08,178 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.8 pTM=0.641 ipTM=0.473 tol=9.91
2024-07-12 11:40:57,175 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=65.9 pTM=0.639 ipTM=0.498 tol=4.24
2024-07-12 11:42:46,140 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=65.8 pTM=0.64 ipTM=0.466 tol=5.25
2024-07-12 11:44:35,092 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=65.9 pTM=0.64 ipTM=0.506 tol=12
2024-07-12 11:46:24,039 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=65.5 pTM=0.638 ipTM=0.498 tol=9.1
2024-07-12 11:48:12,957 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=65.6 pTM=0.639 ipTM=0.501 tol=9.91
2024-07-12 11:50:01,833 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=65.6 pTM=0.641 ipTM=0.487 tol=9.21
2024-07-12 11:51:50,688 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=65.6 pTM=0.64 ipTM=0.486 tol=6.41
2024-07-12 11:53:39,561 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=65.7 pTM=0.642 ipTM=0.502 tol=5.23
2024-07-12 11:55:28,502 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=65.4 pTM=0.639 ipTM=0.494 tol=9.18
2024-07-12 11:57:17,340 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=65.5 pTM=0.641 ipTM=0.51 tol=5.35
2024-07-12 11:59:06,207 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=65.4 pTM=0.638 ipTM=0.5 tol=4.55
2024-07-12 12:00:55,123 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=65.5 pTM=0.642 ipTM=0.488 tol=4.12
2024-07-12 12:02:43,988 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=65.1 pTM=0.638 ipTM=0.497 tol=17
2024-07-12 12:04:32,862 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=65.2 pTM=0.64 ipTM=0.491 tol=13.5
2024-07-12 12:06:21,725 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=65.4 pTM=0.638 ipTM=0.481 tol=7.55
2024-07-12 12:08:10,647 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=65.5 pTM=0.641 ipTM=0.476 tol=7.08
2024-07-12 12:09:59,610 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=65.4 pTM=0.638 ipTM=0.466 tol=6.5
2024-07-12 12:11:48,549 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=65.4 pTM=0.64 ipTM=0.474 tol=4.3
2024-07-12 12:13:37,503 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=65.5 pTM=0.641 ipTM=0.504 tol=8.81
2024-07-12 12:15:26,433 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=65.5 pTM=0.639 ipTM=0.479 tol=7.66
2024-07-12 12:17:15,336 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=65.4 pTM=0.64 ipTM=0.501 tol=7.61
2024-07-12 12:19:04,282 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=65.8 pTM=0.643 ipTM=0.505 tol=8.67
2024-07-12 12:20:53,267 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=65.7 pTM=0.641 ipTM=0.486 tol=9.77
2024-07-12 12:22:42,219 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=65.6 pTM=0.638 ipTM=0.49 tol=6.94
2024-07-12 12:24:31,198 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=65.6 pTM=0.641 ipTM=0.471 tol=11.8
2024-07-12 12:26:20,203 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=65.8 pTM=0.64 ipTM=0.505 tol=8.58
2024-07-12 12:28:09,178 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=65.6 pTM=0.642 ipTM=0.507 tol=9.12
2024-07-12 12:29:58,131 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=65.7 pTM=0.639 ipTM=0.488 tol=7.38
2024-07-12 12:29:58,133 alphafold2_multimer_v3_model_4_seed_000 took 3377.0s (30 recycles)
2024-07-12 12:31:48,918 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=64.3 pTM=0.615 ipTM=0.225
2024-07-12 12:33:37,813 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=65.5 pTM=0.634 ipTM=0.586 tol=14.9
2024-07-12 12:35:26,758 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65.8 pTM=0.637 ipTM=0.551 tol=16.8
2024-07-12 12:37:15,654 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=66.2 pTM=0.641 ipTM=0.508 tol=10.7
2024-07-12 12:39:04,505 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=66.2 pTM=0.642 ipTM=0.526 tol=5.76
2024-07-12 12:40:53,360 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=66.2 pTM=0.644 ipTM=0.515 tol=6.88
2024-07-12 12:42:42,231 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=66.3 pTM=0.644 ipTM=0.56 tol=7.73
2024-07-12 12:44:31,103 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=66.2 pTM=0.643 ipTM=0.549 tol=7.91
2024-07-12 12:46:19,964 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=66.4 pTM=0.645 ipTM=0.574 tol=8.15
2024-07-12 12:48:08,854 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=66.3 pTM=0.642 ipTM=0.615 tol=5.28
2024-07-12 12:49:57,721 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=66.3 pTM=0.643 ipTM=0.622 tol=7.11
2024-07-12 12:51:46,620 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=66.4 pTM=0.643 ipTM=0.634 tol=9.12
2024-07-12 12:53:35,462 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=66.6 pTM=0.643 ipTM=0.64 tol=6.41
2024-07-12 12:55:24,289 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=66.2 pTM=0.64 ipTM=0.642 tol=9.83
2024-07-12 12:57:13,117 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=66.2 pTM=0.641 ipTM=0.629 tol=6.07
2024-07-12 12:59:01,965 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=66.4 pTM=0.641 ipTM=0.649 tol=7.27
2024-07-12 13:00:50,822 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=66.7 pTM=0.642 ipTM=0.657 tol=8.66
2024-07-12 13:02:39,690 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=66.3 pTM=0.639 ipTM=0.646 tol=7.18
2024-07-12 13:04:28,557 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=66.4 pTM=0.641 ipTM=0.647 tol=4.02
2024-07-12 13:06:17,406 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=66.4 pTM=0.639 ipTM=0.642 tol=3.02
2024-07-12 13:08:06,286 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=66.3 pTM=0.641 ipTM=0.651 tol=6
2024-07-12 13:09:55,184 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=66.1 pTM=0.639 ipTM=0.65 tol=6.03
2024-07-12 13:11:44,092 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=66.2 pTM=0.638 ipTM=0.651 tol=6.28
2024-07-12 13:13:32,994 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=66.4 pTM=0.64 ipTM=0.646 tol=3
2024-07-12 13:15:21,862 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=66.6 pTM=0.641 ipTM=0.649 tol=5.35
2024-07-12 13:17:10,823 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=66.3 pTM=0.639 ipTM=0.644 tol=5.03
2024-07-12 13:18:59,712 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=66.3 pTM=0.638 ipTM=0.644 tol=1.99
2024-07-12 13:20:48,644 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=66.3 pTM=0.639 ipTM=0.645 tol=3.17
2024-07-12 13:22:37,555 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=66.6 pTM=0.641 ipTM=0.647 tol=4.46
2024-07-12 13:24:26,416 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=66.2 pTM=0.638 ipTM=0.647 tol=5.07
2024-07-12 13:26:15,297 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=66.5 pTM=0.638 ipTM=0.647 tol=4.65
2024-07-12 13:26:15,299 alphafold2_multimer_v3_model_5_seed_000 took 3375.3s (30 recycles)
2024-07-12 13:26:17,119 reranking models by 'multimer' metric
2024-07-12 13:26:42,386 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 13:31:58,815 Relaxation took 341.7s
2024-07-12 13:31:58,815 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=66.5 pTM=0.638 ipTM=0.647
2024-07-12 13:34:56,031 Relaxation took 177.2s
2024-07-12 13:34:56,031 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=66.7 pTM=0.635 ipTM=0.618
2024-07-12 13:39:43,237 Relaxation took 287.2s
2024-07-12 13:39:43,237 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=65.7 pTM=0.639 ipTM=0.488
2024-07-12 13:43:19,281 Relaxation took 216.0s
2024-07-12 13:43:19,281 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=65.2 pTM=0.613 ipTM=0.345
2024-07-12 13:47:12,170 Relaxation took 232.9s
2024-07-12 13:47:12,170 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=64.5 pTM=0.615 ipTM=0.202
2024-07-12 13:47:26,646 Done