2024-07-12 09:09:25,766 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 09:09:26,068 Running on GPU
2024-07-12 09:09:35,205 Found 6 citations for tools or databases
2024-07-12 09:09:35,206 Query 1/1: PP14A_TBX4 (length 692)
2024-07-12 09:09:35,679 Sleeping for 10s. Reason: PENDING
2024-07-12 09:09:46,102 Sleeping for 7s. Reason: RUNNING
2024-07-12 09:09:53,528 Sleeping for 9s. Reason: RUNNING
2024-07-12 09:10:02,966 Sleeping for 10s. Reason: RUNNING
2024-07-12 09:10:13,404 Sleeping for 8s. Reason: RUNNING
2024-07-12 09:10:21,834 Sleeping for 7s. Reason: RUNNING
2024-07-12 09:10:29,253 Sleeping for 5s. Reason: RUNNING
2024-07-12 09:10:36,188 Sleeping for 5s. Reason: PENDING
2024-07-12 09:10:41,596 Sleeping for 7s. Reason: RUNNING
2024-07-12 09:10:49,028 Sleeping for 8s. Reason: RUNNING
2024-07-12 09:10:57,441 Sleeping for 8s. Reason: RUNNING
2024-07-12 09:11:07,714 Setting max_seq=508, max_extra_seq=2048
2024-07-12 09:14:16,720 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=42.7 pTM=0.355 ipTM=0.227
2024-07-12 09:14:26,460 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=45 pTM=0.405 ipTM=0.449 tol=18.7
2024-07-12 09:14:36,232 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=44 pTM=0.351 ipTM=0.196 tol=12.2
2024-07-12 09:14:46,018 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=44.5 pTM=0.354 ipTM=0.206 tol=7.44
2024-07-12 09:14:55,821 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=44.5 pTM=0.348 ipTM=0.174 tol=11.3
2024-07-12 09:15:05,643 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=44.5 pTM=0.355 ipTM=0.208 tol=9.21
2024-07-12 09:15:15,469 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=44.6 pTM=0.35 ipTM=0.186 tol=12.5
2024-07-12 09:15:25,310 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=44.6 pTM=0.351 ipTM=0.19 tol=9.75
2024-07-12 09:15:35,153 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=44.6 pTM=0.351 ipTM=0.18 tol=13.3
2024-07-12 09:15:45,003 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=44.8 pTM=0.354 ipTM=0.201 tol=12.8
2024-07-12 09:15:54,866 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=44.9 pTM=0.352 ipTM=0.193 tol=11.3
2024-07-12 09:16:04,727 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=44.7 pTM=0.355 ipTM=0.212 tol=12.7
2024-07-12 09:16:14,585 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=44.6 pTM=0.349 ipTM=0.177 tol=10.4
2024-07-12 09:16:24,439 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=44.6 pTM=0.356 ipTM=0.214 tol=12.4
2024-07-12 09:16:34,298 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=44.6 pTM=0.349 ipTM=0.176 tol=10.9
2024-07-12 09:16:44,178 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=44.8 pTM=0.357 ipTM=0.214 tol=12.2
2024-07-12 09:16:54,056 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=44.5 pTM=0.35 ipTM=0.181 tol=9.92
2024-07-12 09:17:03,930 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=44.6 pTM=0.354 ipTM=0.201 tol=8.3
2024-07-12 09:17:13,818 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=44.6 pTM=0.348 ipTM=0.175 tol=12.2
2024-07-12 09:17:23,687 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=44.6 pTM=0.356 ipTM=0.21 tol=8.93
2024-07-12 09:17:33,559 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=44.6 pTM=0.35 ipTM=0.182 tol=9.33
2024-07-12 09:17:43,407 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=44.6 pTM=0.355 ipTM=0.212 tol=10.7
2024-07-12 09:17:53,259 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=44.7 pTM=0.351 ipTM=0.194 tol=10.7
2024-07-12 09:18:03,125 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=44.7 pTM=0.359 ipTM=0.228 tol=13.8
2024-07-12 09:18:12,993 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=44.5 pTM=0.35 ipTM=0.189 tol=16.2
2024-07-12 09:18:22,863 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=44.5 pTM=0.35 ipTM=0.189 tol=12.4
2024-07-12 09:18:32,723 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=44.4 pTM=0.348 ipTM=0.164 tol=7.64
2024-07-12 09:18:42,578 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=44.4 pTM=0.359 ipTM=0.225 tol=13.4
2024-07-12 09:18:52,455 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=44.6 pTM=0.349 ipTM=0.175 tol=6.34
2024-07-12 09:19:02,327 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=44.6 pTM=0.354 ipTM=0.198 tol=7.64
2024-07-12 09:19:12,194 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=44.5 pTM=0.348 ipTM=0.173 tol=11.3
2024-07-12 09:19:12,194 alphafold2_multimer_v3_model_1_seed_000 took 434.3s (30 recycles)
2024-07-12 09:19:22,353 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=43.2 pTM=0.344 ipTM=0.169
2024-07-12 09:19:32,228 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=43.6 pTM=0.344 ipTM=0.144 tol=20.7
2024-07-12 09:19:42,093 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=43.7 pTM=0.351 ipTM=0.183 tol=12.7
2024-07-12 09:19:51,965 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=44.5 pTM=0.352 ipTM=0.188 tol=6.43
2024-07-12 09:20:01,851 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=44.7 pTM=0.347 ipTM=0.158 tol=3.9
2024-07-12 09:20:11,741 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=44.3 pTM=0.356 ipTM=0.198 tol=6.96
2024-07-12 09:20:21,615 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=44.5 pTM=0.354 ipTM=0.197 tol=6.5
2024-07-12 09:20:31,503 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=44.5 pTM=0.348 ipTM=0.161 tol=5.05
2024-07-12 09:20:41,369 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=44.5 pTM=0.35 ipTM=0.172 tol=3.16
2024-07-12 09:20:51,243 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=44.6 pTM=0.347 ipTM=0.158 tol=2.79
2024-07-12 09:21:01,125 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=44.5 pTM=0.349 ipTM=0.161 tol=2.88
2024-07-12 09:21:10,998 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=44.5 pTM=0.349 ipTM=0.168 tol=4.17
2024-07-12 09:21:20,881 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=44.6 pTM=0.354 ipTM=0.187 tol=3.9
2024-07-12 09:21:30,753 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=44.5 pTM=0.349 ipTM=0.168 tol=4.98
2024-07-12 09:21:40,627 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=44.6 pTM=0.357 ipTM=0.198 tol=5.22
2024-07-12 09:21:50,515 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=44.8 pTM=0.348 ipTM=0.163 tol=6.06
2024-07-12 09:22:00,384 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=44.5 pTM=0.356 ipTM=0.198 tol=5.77
2024-07-12 09:22:10,252 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=44.8 pTM=0.355 ipTM=0.198 tol=6.15
2024-07-12 09:22:20,120 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=44.7 pTM=0.35 ipTM=0.173 tol=3.2
2024-07-12 09:22:29,995 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=44.7 pTM=0.353 ipTM=0.185 tol=2.58
2024-07-12 09:22:39,858 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=44.5 pTM=0.347 ipTM=0.158 tol=3.11
2024-07-12 09:22:49,726 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=44.5 pTM=0.354 ipTM=0.187 tol=4.57
2024-07-12 09:22:59,589 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=44.8 pTM=0.348 ipTM=0.16 tol=3.59
2024-07-12 09:23:09,464 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=44.6 pTM=0.352 ipTM=0.178 tol=4.77
2024-07-12 09:23:19,324 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=44.8 pTM=0.355 ipTM=0.191 tol=5.28
2024-07-12 09:23:29,201 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=44.5 pTM=0.346 ipTM=0.155 tol=3.35
2024-07-12 09:23:39,071 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=44.3 pTM=0.352 ipTM=0.179 tol=4.43
2024-07-12 09:23:48,959 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=44.4 pTM=0.345 ipTM=0.154 tol=6.51
2024-07-12 09:23:58,828 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=44.4 pTM=0.352 ipTM=0.183 tol=8.57
2024-07-12 09:24:08,706 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=44.8 pTM=0.354 ipTM=0.192 tol=5.34
2024-07-12 09:24:18,590 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=44.7 pTM=0.346 ipTM=0.152 tol=3.29
2024-07-12 09:24:18,591 alphafold2_multimer_v3_model_2_seed_000 took 306.1s (30 recycles)
2024-07-12 09:24:28,817 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=42.8 pTM=0.343 ipTM=0.198
2024-07-12 09:24:38,771 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=45.8 pTM=0.351 ipTM=0.211 tol=20.2
2024-07-12 09:24:48,724 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=44.4 pTM=0.339 ipTM=0.125 tol=9.08
2024-07-12 09:24:58,657 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=44.5 pTM=0.348 ipTM=0.172 tol=15.2
2024-07-12 09:25:08,604 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=44.1 pTM=0.34 ipTM=0.132 tol=11.5
2024-07-12 09:25:18,546 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=44.4 pTM=0.352 ipTM=0.206 tol=10.6
2024-07-12 09:25:28,488 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=44.4 pTM=0.343 ipTM=0.146 tol=10
2024-07-12 09:25:38,426 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=45.1 pTM=0.37 ipTM=0.275 tol=12.9
2024-07-12 09:25:48,380 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=44.7 pTM=0.345 ipTM=0.166 tol=10.3
2024-07-12 09:25:58,334 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=45.1 pTM=0.366 ipTM=0.266 tol=11.3
2024-07-12 09:26:08,304 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=44.7 pTM=0.344 ipTM=0.154 tol=13.3
2024-07-12 09:26:18,273 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=44.5 pTM=0.342 ipTM=0.15 tol=7.68
2024-07-12 09:26:28,236 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=44.6 pTM=0.34 ipTM=0.141 tol=6.44
2024-07-12 09:26:38,204 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=45.4 pTM=0.372 ipTM=0.293 tol=15.1
2024-07-12 09:26:48,171 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=44.7 pTM=0.347 ipTM=0.18 tol=14.4
2024-07-12 09:26:58,126 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=44.5 pTM=0.347 ipTM=0.174 tol=9.65
2024-07-12 09:27:08,097 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=44.6 pTM=0.346 ipTM=0.17 tol=7.64
2024-07-12 09:27:18,058 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=44.5 pTM=0.343 ipTM=0.154 tol=10.6
2024-07-12 09:27:28,010 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=44.4 pTM=0.34 ipTM=0.138 tol=12.5
2024-07-12 09:27:37,967 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=44.2 pTM=0.342 ipTM=0.152 tol=8.55
2024-07-12 09:27:47,922 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=44.6 pTM=0.341 ipTM=0.146 tol=7.52
2024-07-12 09:27:57,866 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=44.4 pTM=0.349 ipTM=0.18 tol=14.1
2024-07-12 09:28:07,808 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=44.4 pTM=0.344 ipTM=0.166 tol=18.8
2024-07-12 09:28:17,762 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=44.4 pTM=0.352 ipTM=0.198 tol=17.9
2024-07-12 09:28:27,721 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=44.1 pTM=0.338 ipTM=0.129 tol=14
2024-07-12 09:28:37,647 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=44.3 pTM=0.353 ipTM=0.208 tol=12.2
2024-07-12 09:28:47,591 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=44.4 pTM=0.34 ipTM=0.134 tol=7.35
2024-07-12 09:28:57,522 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=44.6 pTM=0.354 ipTM=0.205 tol=6.84
2024-07-12 09:29:07,463 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=44.3 pTM=0.34 ipTM=0.137 tol=9.54
2024-07-12 09:29:17,396 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=44.5 pTM=0.356 ipTM=0.216 tol=8.43
2024-07-12 09:29:27,342 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=44.3 pTM=0.342 ipTM=0.144 tol=5.2
2024-07-12 09:29:27,342 alphafold2_multimer_v3_model_3_seed_000 took 308.4s (30 recycles)
2024-07-12 09:29:37,545 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=43.3 pTM=0.347 ipTM=0.197
2024-07-12 09:29:47,465 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=44 pTM=0.357 ipTM=0.224 tol=14.4
2024-07-12 09:29:57,372 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=44.6 pTM=0.365 ipTM=0.263 tol=9.52
2024-07-12 09:30:07,303 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=45.1 pTM=0.363 ipTM=0.246 tol=7.71
2024-07-12 09:30:17,243 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=44.8 pTM=0.362 ipTM=0.24 tol=5.13
2024-07-12 09:30:27,174 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=47.4 pTM=0.424 ipTM=0.538 tol=5.19
2024-07-12 09:30:37,086 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=47 pTM=0.407 ipTM=0.458 tol=3.55
2024-07-12 09:30:47,008 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=46.5 pTM=0.399 ipTM=0.424 tol=2.8
2024-07-12 09:30:56,931 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=45.4 pTM=0.378 ipTM=0.325 tol=3.71
2024-07-12 09:31:06,868 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=45.1 pTM=0.374 ipTM=0.306 tol=2.37
2024-07-12 09:31:16,797 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=45.2 pTM=0.365 ipTM=0.263 tol=4.81
2024-07-12 09:31:26,724 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=44.7 pTM=0.364 ipTM=0.263 tol=4.34
2024-07-12 09:31:36,659 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=45.2 pTM=0.368 ipTM=0.28 tol=5.93
2024-07-12 09:31:46,596 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=44.9 pTM=0.363 ipTM=0.246 tol=5.88
2024-07-12 09:31:56,503 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=45.2 pTM=0.37 ipTM=0.282 tol=3.44
2024-07-12 09:32:06,415 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=45.2 pTM=0.373 ipTM=0.296 tol=4.65
2024-07-12 09:32:16,338 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=46.3 pTM=0.397 ipTM=0.402 tol=4.71
2024-07-12 09:32:26,262 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=45.3 pTM=0.372 ipTM=0.292 tol=3.38
2024-07-12 09:32:36,174 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=46.3 pTM=0.398 ipTM=0.412 tol=3.9
2024-07-12 09:32:46,089 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=45.2 pTM=0.374 ipTM=0.304 tol=4.32
2024-07-12 09:32:56,001 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=47.1 pTM=0.419 ipTM=0.509 tol=3.6
2024-07-12 09:33:05,922 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=46.1 pTM=0.389 ipTM=0.37 tol=2.97
2024-07-12 09:33:15,836 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=46.1 pTM=0.393 ipTM=0.386 tol=1.98
2024-07-12 09:33:25,756 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=46.6 pTM=0.396 ipTM=0.401 tol=2.32
2024-07-12 09:33:35,676 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=46.7 pTM=0.398 ipTM=0.411 tol=1.7
2024-07-12 09:33:45,589 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=46.2 pTM=0.392 ipTM=0.383 tol=2.31
2024-07-12 09:33:55,505 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=45.9 pTM=0.389 ipTM=0.371 tol=1.89
2024-07-12 09:34:05,427 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=45.4 pTM=0.375 ipTM=0.305 tol=2.11
2024-07-12 09:34:15,339 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=45.2 pTM=0.373 ipTM=0.292 tol=2.63
2024-07-12 09:34:25,257 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=45.2 pTM=0.372 ipTM=0.292 tol=2.32
2024-07-12 09:34:35,175 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=45.4 pTM=0.371 ipTM=0.278 tol=5.45
2024-07-12 09:34:35,176 alphafold2_multimer_v3_model_4_seed_000 took 307.5s (30 recycles)
2024-07-12 09:34:45,417 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=43.7 pTM=0.37 ipTM=0.322
2024-07-12 09:34:55,356 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=44.6 pTM=0.36 ipTM=0.231 tol=16.9
2024-07-12 09:35:05,312 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=44.9 pTM=0.353 ipTM=0.186 tol=9.1
2024-07-12 09:35:15,266 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=44.7 pTM=0.354 ipTM=0.187 tol=9.79
2024-07-12 09:35:25,223 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=44.9 pTM=0.344 ipTM=0.134 tol=7.05
2024-07-12 09:35:35,174 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=44.6 pTM=0.353 ipTM=0.181 tol=8.84
2024-07-12 09:35:45,141 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=44.9 pTM=0.345 ipTM=0.138 tol=8.5
2024-07-12 09:35:55,084 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=44.7 pTM=0.354 ipTM=0.176 tol=4.91
2024-07-12 09:36:05,044 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=44.9 pTM=0.345 ipTM=0.138 tol=2.84
2024-07-12 09:36:14,999 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=44.8 pTM=0.353 ipTM=0.172 tol=3.86
2024-07-12 09:36:24,970 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=45.1 pTM=0.346 ipTM=0.135 tol=3.46
2024-07-12 09:36:34,909 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=45.9 pTM=0.38 ipTM=0.319 tol=4.86
2024-07-12 09:36:44,878 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=45.5 pTM=0.343 ipTM=0.13 tol=4.45
2024-07-12 09:36:54,826 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=44.8 pTM=0.354 ipTM=0.171 tol=4.62
2024-07-12 09:37:04,794 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=45 pTM=0.345 ipTM=0.137 tol=4.56
2024-07-12 09:37:14,763 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=45 pTM=0.368 ipTM=0.245 tol=10
2024-07-12 09:37:24,727 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=45.2 pTM=0.344 ipTM=0.134 tol=9.74
2024-07-12 09:37:34,679 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=44.7 pTM=0.366 ipTM=0.24 tol=6.68
2024-07-12 09:37:44,643 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=45 pTM=0.344 ipTM=0.136 tol=7.88
2024-07-12 09:37:54,600 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=44.6 pTM=0.368 ipTM=0.252 tol=7.97
2024-07-12 09:38:04,559 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=44.9 pTM=0.343 ipTM=0.135 tol=7.72
2024-07-12 09:38:14,525 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=44.6 pTM=0.359 ipTM=0.212 tol=11
2024-07-12 09:38:24,489 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=45 pTM=0.342 ipTM=0.133 tol=12.4
2024-07-12 09:38:34,437 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=45.2 pTM=0.371 ipTM=0.264 tol=11.1
2024-07-12 09:38:44,406 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=45.2 pTM=0.344 ipTM=0.137 tol=6.52
2024-07-12 09:38:54,370 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=44.6 pTM=0.364 ipTM=0.23 tol=6.83
2024-07-12 09:39:04,339 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=45 pTM=0.347 ipTM=0.144 tol=9.2
2024-07-12 09:39:14,281 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=45.4 pTM=0.375 ipTM=0.279 tol=9.45
2024-07-12 09:39:24,250 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=45.2 pTM=0.345 ipTM=0.137 tol=6.21
2024-07-12 09:39:34,201 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=44.7 pTM=0.357 ipTM=0.197 tol=9.93
2024-07-12 09:39:44,170 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=44.9 pTM=0.342 ipTM=0.131 tol=10.1
2024-07-12 09:39:44,171 alphafold2_multimer_v3_model_5_seed_000 took 308.7s (30 recycles)
2024-07-12 09:39:44,478 reranking models by 'multimer' metric
2024-07-12 09:40:06,039 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 09:40:58,016 Relaxation took 73.5s
2024-07-12 09:40:58,017 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=45.4 pTM=0.371 ipTM=0.278
2024-07-12 09:41:53,161 Relaxation took 55.1s
2024-07-12 09:41:53,162 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=44.5 pTM=0.348 ipTM=0.173
2024-07-12 09:42:56,210 Relaxation took 63.0s
2024-07-12 09:42:56,210 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=44.7 pTM=0.346 ipTM=0.152
2024-07-12 09:43:48,391 Relaxation took 52.2s
2024-07-12 09:43:48,391 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=44.3 pTM=0.342 ipTM=0.144
2024-07-12 09:44:41,985 Relaxation took 53.6s
2024-07-12 09:44:41,985 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=44.9 pTM=0.342 ipTM=0.131
2024-07-12 09:44:44,590 Done