2024-07-12 09:19:01,977 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 09:19:02,307 Running on GPU
2024-07-12 09:19:17,490 Found 6 citations for tools or databases
2024-07-12 09:19:17,490 Query 1/1: PPR1A_GUC1B (length 371)
2024-07-12 09:19:17,937 Sleeping for 9s. Reason: PENDING
2024-07-12 09:19:27,367 Sleeping for 5s. Reason: RUNNING
2024-07-12 09:19:32,783 Sleeping for 8s. Reason: RUNNING
2024-07-12 09:19:41,197 Sleeping for 6s. Reason: RUNNING
2024-07-12 09:19:47,614 Sleeping for 10s. Reason: RUNNING
2024-07-12 09:19:59,593 Sleeping for 6s. Reason: PENDING
2024-07-12 09:20:06,019 Sleeping for 8s. Reason: RUNNING
2024-07-12 09:20:14,464 Sleeping for 10s. Reason: RUNNING
2024-07-12 09:20:26,500 Setting max_seq=508, max_extra_seq=2048
2024-07-12 09:23:52,157 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=44.5 pTM=0.441 ipTM=0.159
2024-07-12 09:23:55,656 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=45.3 pTM=0.452 ipTM=0.129 tol=3.3
2024-07-12 09:23:59,157 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=45 pTM=0.454 ipTM=0.198 tol=9.17
2024-07-12 09:24:02,653 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=46.1 pTM=0.458 ipTM=0.255 tol=4.49
2024-07-12 09:24:06,152 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=47.2 pTM=0.468 ipTM=0.296 tol=6.91
2024-07-12 09:24:09,645 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=46.9 pTM=0.46 ipTM=0.277 tol=2.24
2024-07-12 09:24:13,137 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=48.4 pTM=0.48 ipTM=0.335 tol=1.39
2024-07-12 09:24:16,629 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=48.1 pTM=0.478 ipTM=0.315 tol=1.32
2024-07-12 09:24:20,123 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=48.8 pTM=0.483 ipTM=0.346 tol=1.99
2024-07-12 09:24:23,615 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=49.3 pTM=0.487 ipTM=0.347 tol=1.35
2024-07-12 09:24:27,109 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=50 pTM=0.496 ipTM=0.37 tol=1
2024-07-12 09:24:30,602 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=48.8 pTM=0.483 ipTM=0.312 tol=1.37
2024-07-12 09:24:34,096 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=49.4 pTM=0.487 ipTM=0.374 tol=1.55
2024-07-12 09:24:37,592 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=49.7 pTM=0.49 ipTM=0.38 tol=3.76
2024-07-12 09:24:41,088 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=50.4 pTM=0.495 ipTM=0.408 tol=2.64
2024-07-12 09:24:44,585 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=49.4 pTM=0.487 ipTM=0.377 tol=5.15
2024-07-12 09:24:48,083 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=50.3 pTM=0.499 ipTM=0.389 tol=1.96
2024-07-12 09:24:51,579 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=49.8 pTM=0.493 ipTM=0.378 tol=1.92
2024-07-12 09:24:55,073 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=50.4 pTM=0.499 ipTM=0.398 tol=5.11
2024-07-12 09:24:58,567 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=49.5 pTM=0.488 ipTM=0.357 tol=2.58
2024-07-12 09:25:02,064 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=49.8 pTM=0.493 ipTM=0.384 tol=4.89
2024-07-12 09:25:05,560 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=49.3 pTM=0.487 ipTM=0.356 tol=1.61
2024-07-12 09:25:09,058 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=50.3 pTM=0.502 ipTM=0.397 tol=1.92
2024-07-12 09:25:12,557 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=49.8 pTM=0.495 ipTM=0.363 tol=1.57
2024-07-12 09:25:16,054 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=50.3 pTM=0.502 ipTM=0.396 tol=1.43
2024-07-12 09:25:19,550 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=49.1 pTM=0.486 ipTM=0.366 tol=0.866
2024-07-12 09:25:23,047 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=49.5 pTM=0.49 ipTM=0.382 tol=4.36
2024-07-12 09:25:26,543 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=49 pTM=0.483 ipTM=0.375 tol=2.77
2024-07-12 09:25:30,042 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=49.8 pTM=0.494 ipTM=0.392 tol=2.35
2024-07-12 09:25:33,537 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=48.8 pTM=0.479 ipTM=0.347 tol=0.963
2024-07-12 09:25:37,038 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=49.8 pTM=0.493 ipTM=0.393 tol=5.05
2024-07-12 09:25:37,039 alphafold2_multimer_v3_model_1_seed_000 took 261.6s (30 recycles)
2024-07-12 09:25:40,650 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=46.9 pTM=0.458 ipTM=0.146
2024-07-12 09:25:44,151 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=47.8 pTM=0.468 ipTM=0.138 tol=9.57
2024-07-12 09:25:47,651 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=47.8 pTM=0.472 ipTM=0.174 tol=12.4
2024-07-12 09:25:51,145 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=48.9 pTM=0.482 ipTM=0.216 tol=7.16
2024-07-12 09:25:54,642 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=49 pTM=0.479 ipTM=0.214 tol=5.76
2024-07-12 09:25:58,138 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=49.2 pTM=0.482 ipTM=0.214 tol=2.9
2024-07-12 09:26:01,633 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=49.8 pTM=0.488 ipTM=0.21 tol=2.56
2024-07-12 09:26:05,128 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=49.3 pTM=0.484 ipTM=0.22 tol=4.12
2024-07-12 09:26:08,629 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=49.8 pTM=0.489 ipTM=0.211 tol=3.09
2024-07-12 09:26:12,125 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=49.1 pTM=0.481 ipTM=0.213 tol=3.75
2024-07-12 09:26:15,624 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=49.6 pTM=0.484 ipTM=0.209 tol=2.91
2024-07-12 09:26:19,120 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=49.6 pTM=0.483 ipTM=0.214 tol=4.33
2024-07-12 09:26:22,617 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=50 pTM=0.487 ipTM=0.204 tol=4.41
2024-07-12 09:26:26,115 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=49.8 pTM=0.486 ipTM=0.228 tol=4.39
2024-07-12 09:26:29,616 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=49.6 pTM=0.484 ipTM=0.208 tol=2.43
2024-07-12 09:26:33,115 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=49.3 pTM=0.479 ipTM=0.221 tol=3.61
2024-07-12 09:26:36,617 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=50.3 pTM=0.493 ipTM=0.212 tol=4.42
2024-07-12 09:26:40,114 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=49.6 pTM=0.486 ipTM=0.232 tol=3.49
2024-07-12 09:26:43,615 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=50.3 pTM=0.493 ipTM=0.22 tol=4.07
2024-07-12 09:26:47,113 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=49.3 pTM=0.482 ipTM=0.21 tol=3.5
2024-07-12 09:26:50,614 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=50.3 pTM=0.497 ipTM=0.225 tol=4.49
2024-07-12 09:26:54,112 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=49.4 pTM=0.481 ipTM=0.218 tol=2.57
2024-07-12 09:26:57,614 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=50.2 pTM=0.495 ipTM=0.231 tol=2.27
2024-07-12 09:27:01,112 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=49.4 pTM=0.483 ipTM=0.21 tol=2.52
2024-07-12 09:27:04,614 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=50.1 pTM=0.49 ipTM=0.211 tol=7.8
2024-07-12 09:27:08,112 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=50.1 pTM=0.488 ipTM=0.237 tol=3.94
2024-07-12 09:27:11,611 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=50.3 pTM=0.493 ipTM=0.239 tol=3.25
2024-07-12 09:27:15,108 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=49.6 pTM=0.488 ipTM=0.222 tol=4.59
2024-07-12 09:27:18,608 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=50.1 pTM=0.491 ipTM=0.211 tol=2.95
2024-07-12 09:27:22,104 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=49 pTM=0.48 ipTM=0.219 tol=2.44
2024-07-12 09:27:25,606 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=50.5 pTM=0.495 ipTM=0.228 tol=3
2024-07-12 09:27:25,607 alphafold2_multimer_v3_model_2_seed_000 took 108.5s (30 recycles)
2024-07-12 09:27:29,234 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=44.3 pTM=0.396 ipTM=0.169
2024-07-12 09:27:32,755 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=44 pTM=0.39 ipTM=0.246 tol=17.9
2024-07-12 09:27:36,278 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=43.1 pTM=0.369 ipTM=0.172 tol=12.3
2024-07-12 09:27:39,793 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=43.5 pTM=0.371 ipTM=0.163 tol=12.6
2024-07-12 09:27:43,306 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=43.7 pTM=0.388 ipTM=0.176 tol=8.9
2024-07-12 09:27:46,817 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=43.1 pTM=0.372 ipTM=0.182 tol=9.79
2024-07-12 09:27:50,330 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=45.2 pTM=0.423 ipTM=0.205 tol=7
2024-07-12 09:27:53,840 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=44.7 pTM=0.406 ipTM=0.218 tol=7.97
2024-07-12 09:27:57,352 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=45.1 pTM=0.422 ipTM=0.219 tol=6.64
2024-07-12 09:28:00,864 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=45.6 pTM=0.419 ipTM=0.203 tol=8.2
2024-07-12 09:28:04,374 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=44.7 pTM=0.409 ipTM=0.2 tol=8.58
2024-07-12 09:28:07,886 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=46 pTM=0.411 ipTM=0.266 tol=2.4
2024-07-12 09:28:11,400 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=46.5 pTM=0.433 ipTM=0.208 tol=2.45
2024-07-12 09:28:14,911 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=44.8 pTM=0.411 ipTM=0.219 tol=3.22
2024-07-12 09:28:18,422 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=45.9 pTM=0.433 ipTM=0.21 tol=9.19
2024-07-12 09:28:21,933 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=44.9 pTM=0.409 ipTM=0.218 tol=5.82
2024-07-12 09:28:25,445 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=45.3 pTM=0.426 ipTM=0.211 tol=4.23
2024-07-12 09:28:28,956 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=45 pTM=0.412 ipTM=0.224 tol=4.18
2024-07-12 09:28:32,468 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=46.3 pTM=0.433 ipTM=0.217 tol=5.62
2024-07-12 09:28:35,978 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=45.1 pTM=0.418 ipTM=0.209 tol=2.21
2024-07-12 09:28:39,487 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=45.4 pTM=0.421 ipTM=0.214 tol=8.08
2024-07-12 09:28:42,999 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=45 pTM=0.426 ipTM=0.212 tol=7.39
2024-07-12 09:28:46,510 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=45.6 pTM=0.422 ipTM=0.202 tol=6.16
2024-07-12 09:28:50,026 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=46.2 pTM=0.429 ipTM=0.233 tol=7.34
2024-07-12 09:28:53,540 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=46.2 pTM=0.429 ipTM=0.207 tol=18.7
2024-07-12 09:28:57,049 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=44.7 pTM=0.406 ipTM=0.207 tol=11.7
2024-07-12 09:29:00,559 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=46.1 pTM=0.431 ipTM=0.208 tol=7.05
2024-07-12 09:29:04,070 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=45.2 pTM=0.418 ipTM=0.223 tol=3.87
2024-07-12 09:29:07,583 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=45.4 pTM=0.421 ipTM=0.216 tol=9.56
2024-07-12 09:29:11,090 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=45.2 pTM=0.41 ipTM=0.218 tol=6.89
2024-07-12 09:29:14,602 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=45.7 pTM=0.419 ipTM=0.216 tol=5.09
2024-07-12 09:29:14,603 alphafold2_multimer_v3_model_3_seed_000 took 108.9s (30 recycles)
2024-07-12 09:29:18,210 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=46.6 pTM=0.446 ipTM=0.197
2024-07-12 09:29:21,715 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=47.9 pTM=0.465 ipTM=0.196 tol=12.4
2024-07-12 09:29:25,218 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=48.1 pTM=0.462 ipTM=0.226 tol=9.59
2024-07-12 09:29:28,720 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=47.2 pTM=0.457 ipTM=0.216 tol=5.81
2024-07-12 09:29:32,228 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=49 pTM=0.475 ipTM=0.236 tol=6.89
2024-07-12 09:29:35,729 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=47.5 pTM=0.463 ipTM=0.211 tol=8.86
2024-07-12 09:29:39,232 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=49.6 pTM=0.481 ipTM=0.22 tol=9.8
2024-07-12 09:29:42,733 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=47.8 pTM=0.461 ipTM=0.238 tol=4.35
2024-07-12 09:29:46,239 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=49.7 pTM=0.485 ipTM=0.232 tol=7.39
2024-07-12 09:29:49,741 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=47.8 pTM=0.467 ipTM=0.244 tol=21.8
2024-07-12 09:29:53,244 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=49.4 pTM=0.48 ipTM=0.269 tol=14.6
2024-07-12 09:29:56,746 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=48 pTM=0.464 ipTM=0.234 tol=10.4
2024-07-12 09:30:00,251 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=50 pTM=0.491 ipTM=0.267 tol=10.8
2024-07-12 09:30:03,753 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=48 pTM=0.461 ipTM=0.227 tol=5.81
2024-07-12 09:30:07,261 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=49.2 pTM=0.477 ipTM=0.206 tol=6.68
2024-07-12 09:30:10,765 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=48.9 pTM=0.478 ipTM=0.269 tol=18.9
2024-07-12 09:30:14,268 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=49 pTM=0.473 ipTM=0.248 tol=14.3
2024-07-12 09:30:17,771 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=49.7 pTM=0.488 ipTM=0.278 tol=7.3
2024-07-12 09:30:21,276 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=49 pTM=0.471 ipTM=0.244 tol=9.5
2024-07-12 09:30:24,781 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=49.1 pTM=0.48 ipTM=0.241 tol=14.5
2024-07-12 09:30:28,290 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=48.8 pTM=0.472 ipTM=0.242 tol=11.9
2024-07-12 09:30:31,795 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=48.6 pTM=0.475 ipTM=0.221 tol=12.4
2024-07-12 09:30:35,298 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=49.3 pTM=0.478 ipTM=0.259 tol=13.2
2024-07-12 09:30:38,807 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=49.3 pTM=0.478 ipTM=0.259 tol=22.9
2024-07-12 09:30:42,306 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=49.3 pTM=0.483 ipTM=0.256 tol=8.94
2024-07-12 09:30:45,805 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=48.8 pTM=0.472 ipTM=0.256 tol=11.3
2024-07-12 09:30:49,307 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=49.6 pTM=0.484 ipTM=0.267 tol=11.5
2024-07-12 09:30:52,812 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=48.2 pTM=0.469 ipTM=0.245 tol=12.1
2024-07-12 09:30:56,318 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=50.6 pTM=0.498 ipTM=0.289 tol=12.7
2024-07-12 09:30:59,822 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=48 pTM=0.466 ipTM=0.252 tol=11.1
2024-07-12 09:31:03,329 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=50 pTM=0.49 ipTM=0.277 tol=11.2
2024-07-12 09:31:03,329 alphafold2_multimer_v3_model_4_seed_000 took 108.6s (30 recycles)
2024-07-12 09:31:06,949 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=43.5 pTM=0.402 ipTM=0.135
2024-07-12 09:31:10,455 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=44.5 pTM=0.434 ipTM=0.198 tol=12
2024-07-12 09:31:13,965 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=44.9 pTM=0.438 ipTM=0.254 tol=6.74
2024-07-12 09:31:17,475 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=43.8 pTM=0.426 ipTM=0.178 tol=4.91
2024-07-12 09:31:20,983 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=44.2 pTM=0.429 ipTM=0.188 tol=8.8
2024-07-12 09:31:24,489 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=45 pTM=0.438 ipTM=0.199 tol=5.76
2024-07-12 09:31:28,004 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=46 pTM=0.446 ipTM=0.216 tol=2.76
2024-07-12 09:31:31,515 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=45.8 pTM=0.453 ipTM=0.212 tol=5.61
2024-07-12 09:31:35,028 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=47.2 pTM=0.46 ipTM=0.244 tol=2.3
2024-07-12 09:31:38,541 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=46.2 pTM=0.455 ipTM=0.235 tol=4.61
2024-07-12 09:31:42,054 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=47.2 pTM=0.465 ipTM=0.236 tol=6.38
2024-07-12 09:31:45,562 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=47.8 pTM=0.465 ipTM=0.246 tol=2.43
2024-07-12 09:31:49,076 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=47.3 pTM=0.461 ipTM=0.235 tol=4.77
2024-07-12 09:31:52,588 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=47.8 pTM=0.473 ipTM=0.258 tol=8.1
2024-07-12 09:31:56,100 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=47.5 pTM=0.461 ipTM=0.237 tol=2.85
2024-07-12 09:31:59,615 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=46.7 pTM=0.457 ipTM=0.227 tol=5.28
2024-07-12 09:32:03,127 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=47.2 pTM=0.466 ipTM=0.241 tol=5.06
2024-07-12 09:32:06,639 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=47.5 pTM=0.468 ipTM=0.237 tol=4.55
2024-07-12 09:32:10,152 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=47.6 pTM=0.46 ipTM=0.236 tol=11.2
2024-07-12 09:32:13,668 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=46.2 pTM=0.457 ipTM=0.23 tol=9.45
2024-07-12 09:32:17,184 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=47.4 pTM=0.464 ipTM=0.223 tol=10.5
2024-07-12 09:32:20,693 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=46.8 pTM=0.467 ipTM=0.244 tol=7.34
2024-07-12 09:32:24,211 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=48 pTM=0.472 ipTM=0.225 tol=16.1
2024-07-12 09:32:27,723 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=46.8 pTM=0.462 ipTM=0.228 tol=13.9
2024-07-12 09:32:31,234 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=48.4 pTM=0.478 ipTM=0.306 tol=8.98
2024-07-12 09:32:34,742 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=47.3 pTM=0.467 ipTM=0.225 tol=10.7
2024-07-12 09:32:38,254 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=46.8 pTM=0.455 ipTM=0.227 tol=8.48
2024-07-12 09:32:41,763 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=47 pTM=0.465 ipTM=0.215 tol=4.72
2024-07-12 09:32:45,277 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=47.7 pTM=0.463 ipTM=0.231 tol=3.77
2024-07-12 09:32:48,792 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=46.6 pTM=0.457 ipTM=0.22 tol=4.27
2024-07-12 09:32:52,309 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=47.8 pTM=0.469 ipTM=0.233 tol=4.79
2024-07-12 09:32:52,309 alphafold2_multimer_v3_model_5_seed_000 took 108.9s (30 recycles)
2024-07-12 09:32:52,413 reranking models by 'multimer' metric
2024-07-12 09:33:03,687 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 09:33:33,502 Relaxation took 41.1s
2024-07-12 09:33:33,502 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=49.8 pTM=0.493 ipTM=0.393
2024-07-12 09:33:51,517 Relaxation took 18.0s
2024-07-12 09:33:51,517 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=50 pTM=0.49 ipTM=0.277
2024-07-12 09:34:11,133 Relaxation took 19.6s
2024-07-12 09:34:11,133 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=50.5 pTM=0.495 ipTM=0.228
2024-07-12 09:34:30,886 Relaxation took 19.8s
2024-07-12 09:34:30,886 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=47.8 pTM=0.469 ipTM=0.233
2024-07-12 09:34:50,089 Relaxation took 19.2s
2024-07-12 09:34:50,089 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=45.7 pTM=0.419 ipTM=0.216
2024-07-12 09:34:50,955 Done