2024-07-12 09:44:39,075 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 09:44:39,398 Running on GPU
2024-07-12 09:44:54,553 Found 6 citations for tools or databases
2024-07-12 09:44:54,553 Query 1/1: PRA19_VP9D1 (length 1110)
2024-07-12 09:44:55,015 Sleeping for 9s. Reason: PENDING
2024-07-12 09:45:04,442 Sleeping for 5s. Reason: RUNNING
2024-07-12 09:45:09,862 Sleeping for 10s. Reason: RUNNING
2024-07-12 09:45:20,307 Sleeping for 5s. Reason: RUNNING
2024-07-12 09:45:25,727 Sleeping for 5s. Reason: RUNNING
2024-07-12 09:45:31,159 Sleeping for 5s. Reason: RUNNING
2024-07-12 09:45:36,578 Sleeping for 8s. Reason: RUNNING
2024-07-12 09:45:45,005 Sleeping for 7s. Reason: RUNNING
2024-07-12 09:45:52,444 Sleeping for 6s. Reason: RUNNING
2024-07-12 09:46:00,429 Sleeping for 7s. Reason: PENDING
2024-07-12 09:46:07,841 Sleeping for 6s. Reason: RUNNING
2024-07-12 09:46:14,274 Sleeping for 9s. Reason: RUNNING
2024-07-12 09:46:23,697 Sleeping for 5s. Reason: RUNNING
2024-07-12 09:46:29,161 Sleeping for 9s. Reason: RUNNING
2024-07-12 09:46:40,556 Setting max_seq=508, max_extra_seq=2048
2024-07-12 09:50:31,279 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=63.9 pTM=0.47 ipTM=0.182
2024-07-12 09:51:00,078 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=63.7 pTM=0.471 ipTM=0.18 tol=13.3
2024-07-12 09:51:28,998 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66.6 pTM=0.472 ipTM=0.187 tol=17.8
2024-07-12 09:51:58,009 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=67.8 pTM=0.473 ipTM=0.184 tol=7.49
2024-07-12 09:52:27,096 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=65.6 pTM=0.483 ipTM=0.203 tol=11.6
2024-07-12 09:52:56,265 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66.1 pTM=0.478 ipTM=0.191 tol=7.78
2024-07-12 09:53:25,481 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=67 pTM=0.481 ipTM=0.2 tol=11.8
2024-07-12 09:53:54,717 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=66 pTM=0.485 ipTM=0.211 tol=11.6
2024-07-12 09:54:23,971 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.7 pTM=0.479 ipTM=0.197 tol=12.9
2024-07-12 09:54:53,223 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=66.3 pTM=0.484 ipTM=0.201 tol=13.1
2024-07-12 09:55:22,479 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=65.9 pTM=0.481 ipTM=0.195 tol=2.8
2024-07-12 09:55:51,744 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=67.6 pTM=0.484 ipTM=0.204 tol=12.4
2024-07-12 09:56:21,025 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=66.8 pTM=0.479 ipTM=0.194 tol=11.9
2024-07-12 09:56:50,275 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=65.9 pTM=0.478 ipTM=0.193 tol=1.73
2024-07-12 09:57:19,522 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=66.8 pTM=0.48 ipTM=0.194 tol=11.9
2024-07-12 09:57:48,718 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=66.1 pTM=0.48 ipTM=0.198 tol=11.5
2024-07-12 09:58:17,930 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=67.6 pTM=0.481 ipTM=0.196 tol=12
2024-07-12 09:58:47,099 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=66.4 pTM=0.482 ipTM=0.203 tol=2.39
2024-07-12 09:59:16,274 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=66.6 pTM=0.484 ipTM=0.202 tol=12.2
2024-07-12 09:59:45,461 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=65.8 pTM=0.49 ipTM=0.212 tol=2.71
2024-07-12 10:00:14,669 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=67.2 pTM=0.485 ipTM=0.206 tol=12.8
2024-07-12 10:00:43,860 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.2 pTM=0.485 ipTM=0.205 tol=12.8
2024-07-12 10:01:13,070 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=66.1 pTM=0.482 ipTM=0.199 tol=1.69
2024-07-12 10:01:42,284 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66.7 pTM=0.506 ipTM=0.258 tol=12.6
2024-07-12 10:02:11,488 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=67.1 pTM=0.487 ipTM=0.205 tol=12.4
2024-07-12 10:02:40,690 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=65.6 pTM=0.49 ipTM=0.214 tol=4
2024-07-12 10:03:09,914 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=67.6 pTM=0.481 ipTM=0.198 tol=13.1
2024-07-12 10:03:39,119 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=66.2 pTM=0.487 ipTM=0.208 tol=13.2
2024-07-12 10:04:08,328 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=65.6 pTM=0.489 ipTM=0.225 tol=3.18
2024-07-12 10:04:37,546 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.9 pTM=0.487 ipTM=0.208 tol=12.2
2024-07-12 10:05:06,741 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=65.9 pTM=0.485 ipTM=0.204 tol=12.1
2024-07-12 10:05:06,742 alphafold2_multimer_v3_model_1_seed_000 took 1047.4s (30 recycles)
2024-07-12 10:05:36,703 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=68.4 pTM=0.473 ipTM=0.185
2024-07-12 10:06:05,961 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=68.7 pTM=0.467 ipTM=0.173 tol=5.6
2024-07-12 10:06:35,231 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=68.8 pTM=0.468 ipTM=0.175 tol=3.15
2024-07-12 10:07:04,475 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=69 pTM=0.469 ipTM=0.177 tol=3.64
2024-07-12 10:07:33,678 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=68.8 pTM=0.47 ipTM=0.18 tol=2.39
2024-07-12 10:08:02,902 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=68.8 pTM=0.468 ipTM=0.177 tol=2.15
2024-07-12 10:08:32,129 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=68.3 pTM=0.469 ipTM=0.179 tol=1.68
2024-07-12 10:09:01,379 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.4 pTM=0.47 ipTM=0.183 tol=1.34
2024-07-12 10:09:30,617 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=67.9 pTM=0.471 ipTM=0.187 tol=1.09
2024-07-12 10:09:59,849 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=68.1 pTM=0.472 ipTM=0.185 tol=1.49
2024-07-12 10:10:29,102 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=68.4 pTM=0.471 ipTM=0.186 tol=0.789
2024-07-12 10:10:58,347 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=67.9 pTM=0.471 ipTM=0.187 tol=0.873
2024-07-12 10:11:27,592 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=68.5 pTM=0.471 ipTM=0.188 tol=1.12
2024-07-12 10:11:56,839 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=67.5 pTM=0.465 ipTM=0.182 tol=1.84
2024-07-12 10:12:26,099 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=68.4 pTM=0.47 ipTM=0.188 tol=2.54
2024-07-12 10:12:55,359 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=67.4 pTM=0.466 ipTM=0.184 tol=3.84
2024-07-12 10:13:24,628 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=68.2 pTM=0.469 ipTM=0.187 tol=6.91
2024-07-12 10:13:53,886 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=67.3 pTM=0.471 ipTM=0.191 tol=1.95
2024-07-12 10:14:23,160 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=68.2 pTM=0.471 ipTM=0.19 tol=2.59
2024-07-12 10:14:52,444 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=67.7 pTM=0.47 ipTM=0.186 tol=2.37
2024-07-12 10:15:21,717 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=68.1 pTM=0.473 ipTM=0.193 tol=5.17
2024-07-12 10:15:50,983 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=67.3 pTM=0.469 ipTM=0.187 tol=2.45
2024-07-12 10:16:20,253 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=67.9 pTM=0.466 ipTM=0.182 tol=2.77
2024-07-12 10:16:49,530 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=67.4 pTM=0.47 ipTM=0.187 tol=2.05
2024-07-12 10:17:18,780 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=68.4 pTM=0.474 ipTM=0.193 tol=2.67
2024-07-12 10:17:48,007 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=67.8 pTM=0.471 ipTM=0.189 tol=1.15
2024-07-12 10:18:17,236 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=68.1 pTM=0.469 ipTM=0.185 tol=1.11
2024-07-12 10:18:46,449 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=67.9 pTM=0.47 ipTM=0.189 tol=1.08
2024-07-12 10:19:15,679 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=67.5 pTM=0.467 ipTM=0.186 tol=0.975
2024-07-12 10:19:44,915 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=67.8 pTM=0.471 ipTM=0.191 tol=1.42
2024-07-12 10:20:14,141 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=67.7 pTM=0.471 ipTM=0.19 tol=1.03
2024-07-12 10:20:14,142 alphafold2_multimer_v3_model_2_seed_000 took 906.6s (30 recycles)
2024-07-12 10:20:44,152 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=67.6 pTM=0.455 ipTM=0.17
2024-07-12 10:21:13,366 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=68.1 pTM=0.482 ipTM=0.254 tol=6.98
2024-07-12 10:21:42,664 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=67.1 pTM=0.47 ipTM=0.171 tol=10.5
2024-07-12 10:22:11,970 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=67.4 pTM=0.466 ipTM=0.167 tol=8.75
2024-07-12 10:22:41,290 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=67.4 pTM=0.471 ipTM=0.168 tol=8.84
2024-07-12 10:23:10,598 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=67.6 pTM=0.469 ipTM=0.169 tol=12.6
2024-07-12 10:23:39,906 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=67.8 pTM=0.471 ipTM=0.173 tol=6.6
2024-07-12 10:24:09,181 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=68.5 pTM=0.475 ipTM=0.174 tol=4.18
2024-07-12 10:24:38,453 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=68.4 pTM=0.474 ipTM=0.176 tol=1.78
2024-07-12 10:25:07,700 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=68.1 pTM=0.479 ipTM=0.184 tol=1.68
2024-07-12 10:25:36,973 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=68.8 pTM=0.477 ipTM=0.177 tol=1.53
2024-07-12 10:26:06,206 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=68.1 pTM=0.492 ipTM=0.233 tol=15
2024-07-12 10:26:35,504 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=68.6 pTM=0.475 ipTM=0.174 tol=4.5
2024-07-12 10:27:04,798 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=68.4 pTM=0.473 ipTM=0.175 tol=12.7
2024-07-12 10:27:34,024 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=68.7 pTM=0.474 ipTM=0.177 tol=4.66
2024-07-12 10:28:03,231 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=68.6 pTM=0.472 ipTM=0.18 tol=2.6
2024-07-12 10:28:32,465 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=68.9 pTM=0.472 ipTM=0.176 tol=1.86
2024-07-12 10:29:01,692 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=68.6 pTM=0.473 ipTM=0.182 tol=4.39
2024-07-12 10:29:30,931 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=68.8 pTM=0.472 ipTM=0.176 tol=5.9
2024-07-12 10:30:00,157 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=68.8 pTM=0.474 ipTM=0.182 tol=2.01
2024-07-12 10:30:29,391 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=68.4 pTM=0.471 ipTM=0.174 tol=1.74
2024-07-12 10:30:58,626 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=68.7 pTM=0.478 ipTM=0.188 tol=1.65
2024-07-12 10:31:27,870 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=68.8 pTM=0.476 ipTM=0.186 tol=1.77
2024-07-12 10:31:57,111 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=69 pTM=0.48 ipTM=0.19 tol=1.51
2024-07-12 10:32:26,352 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=69.4 pTM=0.481 ipTM=0.193 tol=1.44
2024-07-12 10:32:55,603 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=69.2 pTM=0.483 ipTM=0.194 tol=1.53
2024-07-12 10:33:24,858 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=69.2 pTM=0.477 ipTM=0.182 tol=2.05
2024-07-12 10:33:54,134 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=68.1 pTM=0.472 ipTM=0.171 tol=7.77
2024-07-12 10:34:23,413 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=69.2 pTM=0.471 ipTM=0.173 tol=5.59
2024-07-12 10:34:52,675 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=69.1 pTM=0.476 ipTM=0.182 tol=3.04
2024-07-12 10:35:21,961 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=69.1 pTM=0.474 ipTM=0.177 tol=2.34
2024-07-12 10:35:21,962 alphafold2_multimer_v3_model_3_seed_000 took 907.1s (30 recycles)
2024-07-12 10:35:51,977 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=65.6 pTM=0.476 ipTM=0.207
2024-07-12 10:36:21,217 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=64 pTM=0.495 ipTM=0.223 tol=15
2024-07-12 10:36:50,502 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.2 pTM=0.485 ipTM=0.219 tol=14.1
2024-07-12 10:37:19,845 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=65.9 pTM=0.474 ipTM=0.188 tol=6.26
2024-07-12 10:37:49,175 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=66 pTM=0.477 ipTM=0.192 tol=3.46
2024-07-12 10:38:18,481 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=65.4 pTM=0.484 ipTM=0.203 tol=9.73
2024-07-12 10:38:47,810 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=65.7 pTM=0.473 ipTM=0.187 tol=9.39
2024-07-12 10:39:17,115 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=65.6 pTM=0.48 ipTM=0.198 tol=6.01
2024-07-12 10:39:46,433 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=65.7 pTM=0.472 ipTM=0.191 tol=4.61
2024-07-12 10:40:15,711 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=65.6 pTM=0.474 ipTM=0.191 tol=7.14
2024-07-12 10:40:44,978 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=66 pTM=0.473 ipTM=0.187 tol=2.79
2024-07-12 10:41:14,206 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=64.5 pTM=0.479 ipTM=0.194 tol=10.3
2024-07-12 10:41:43,463 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=64.6 pTM=0.473 ipTM=0.189 tol=9.69
2024-07-12 10:42:12,688 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=63.8 pTM=0.482 ipTM=0.216 tol=13.6
2024-07-12 10:42:41,958 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=65.2 pTM=0.472 ipTM=0.191 tol=12.2
2024-07-12 10:43:11,216 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64.6 pTM=0.473 ipTM=0.196 tol=10.1
2024-07-12 10:43:40,501 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=65.1 pTM=0.474 ipTM=0.194 tol=9.49
2024-07-12 10:44:09,753 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63.6 pTM=0.477 ipTM=0.199 tol=12.9
2024-07-12 10:44:38,998 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=64.8 pTM=0.474 ipTM=0.193 tol=11.4
2024-07-12 10:45:08,215 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=65 pTM=0.476 ipTM=0.192 tol=7.3
2024-07-12 10:45:37,453 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.7 pTM=0.474 ipTM=0.192 tol=3.24
2024-07-12 10:46:06,677 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=64.1 pTM=0.475 ipTM=0.193 tol=8.84
2024-07-12 10:46:35,922 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=64.3 pTM=0.473 ipTM=0.19 tol=9.55
2024-07-12 10:47:05,164 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=64.5 pTM=0.475 ipTM=0.194 tol=8.6
2024-07-12 10:47:34,449 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=65.3 pTM=0.473 ipTM=0.188 tol=9.1
2024-07-12 10:48:03,686 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64.2 pTM=0.479 ipTM=0.197 tol=9.23
2024-07-12 10:48:32,968 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64.9 pTM=0.472 ipTM=0.188 tol=11
2024-07-12 10:49:02,228 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=65.1 pTM=0.475 ipTM=0.193 tol=11.4
2024-07-12 10:49:31,501 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=64.5 pTM=0.47 ipTM=0.189 tol=10.9
2024-07-12 10:50:00,761 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=63.5 pTM=0.475 ipTM=0.196 tol=9.95
2024-07-12 10:50:30,036 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=63.9 pTM=0.473 ipTM=0.192 tol=9.09
2024-07-12 10:50:30,037 alphafold2_multimer_v3_model_4_seed_000 took 907.3s (30 recycles)
2024-07-12 10:51:00,036 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=66.1 pTM=0.472 ipTM=0.183
2024-07-12 10:51:29,347 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=67.4 pTM=0.466 ipTM=0.173 tol=7.91
2024-07-12 10:51:58,643 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=66.3 pTM=0.467 ipTM=0.173 tol=18
2024-07-12 10:52:27,896 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=66.7 pTM=0.47 ipTM=0.18 tol=9.77
2024-07-12 10:52:57,166 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67.4 pTM=0.47 ipTM=0.181 tol=4.11
2024-07-12 10:53:26,411 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=67.4 pTM=0.478 ipTM=0.19 tol=4.77
2024-07-12 10:53:55,648 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=66.6 pTM=0.48 ipTM=0.199 tol=12.3
2024-07-12 10:54:24,902 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=67.2 pTM=0.471 ipTM=0.18 tol=8.39
2024-07-12 10:54:54,146 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=67.5 pTM=0.469 ipTM=0.179 tol=11.6
2024-07-12 10:55:23,368 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67.3 pTM=0.474 ipTM=0.187 tol=6.62
2024-07-12 10:55:52,553 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67.9 pTM=0.482 ipTM=0.199 tol=7.21
2024-07-12 10:56:21,732 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.6 pTM=0.47 ipTM=0.181 tol=2.98
2024-07-12 10:56:50,918 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.5 pTM=0.471 ipTM=0.182 tol=2.82
2024-07-12 10:57:20,132 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=67.2 pTM=0.469 ipTM=0.181 tol=3.16
2024-07-12 10:57:49,382 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=67.4 pTM=0.471 ipTM=0.183 tol=3.02
2024-07-12 10:58:18,645 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.1 pTM=0.467 ipTM=0.179 tol=3.38
2024-07-12 10:58:47,903 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.2 pTM=0.47 ipTM=0.183 tol=4.23
2024-07-12 10:59:17,189 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=67 pTM=0.468 ipTM=0.18 tol=3.13
2024-07-12 10:59:46,469 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=66.9 pTM=0.469 ipTM=0.182 tol=3.82
2024-07-12 11:00:15,755 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=67.2 pTM=0.469 ipTM=0.181 tol=6.86
2024-07-12 11:00:45,013 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=67.3 pTM=0.469 ipTM=0.181 tol=4.53
2024-07-12 11:01:14,247 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=67.1 pTM=0.469 ipTM=0.18 tol=2.36
2024-07-12 11:01:43,465 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=66.8 pTM=0.469 ipTM=0.182 tol=4.01
2024-07-12 11:02:12,684 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=67.4 pTM=0.47 ipTM=0.182 tol=3.96
2024-07-12 11:02:41,893 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=67.6 pTM=0.469 ipTM=0.181 tol=4.32
2024-07-12 11:03:11,102 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=67.7 pTM=0.47 ipTM=0.183 tol=2.92
2024-07-12 11:03:40,294 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=67.4 pTM=0.469 ipTM=0.18 tol=2.79
2024-07-12 11:04:09,497 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=67.6 pTM=0.469 ipTM=0.179 tol=2.81
2024-07-12 11:04:38,692 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=67.5 pTM=0.468 ipTM=0.179 tol=3.45
2024-07-12 11:05:07,903 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=67.5 pTM=0.47 ipTM=0.181 tol=3.14
2024-07-12 11:05:37,130 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67.2 pTM=0.468 ipTM=0.18 tol=2.43
2024-07-12 11:05:37,131 alphafold2_multimer_v3_model_5_seed_000 took 906.3s (30 recycles)
2024-07-12 11:05:37,883 reranking models by 'multimer' metric
2024-07-12 11:05:46,143 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 11:07:45,836 Relaxation took 128.0s
2024-07-12 11:07:45,836 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=65.9 pTM=0.485 ipTM=0.204
2024-07-12 11:09:44,697 Relaxation took 118.9s
2024-07-12 11:09:44,697 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=63.9 pTM=0.473 ipTM=0.192
2024-07-12 11:11:16,179 Relaxation took 91.5s
2024-07-12 11:11:16,179 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=67.7 pTM=0.471 ipTM=0.19
2024-07-12 11:12:44,593 Relaxation took 88.4s
2024-07-12 11:12:44,593 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67.2 pTM=0.468 ipTM=0.18
2024-07-12 11:14:50,780 Relaxation took 126.2s
2024-07-12 11:14:50,780 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=69.1 pTM=0.474 ipTM=0.177
2024-07-12 11:14:52,934 Done