2024-07-12 10:52:06,066 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 10:52:06,382 Running on GPU
2024-07-12 10:52:20,305 Found 6 citations for tools or databases
2024-07-12 10:52:20,305 Query 1/1: PRR26_KITM (length 486)
2024-07-12 10:52:20,810 Sleeping for 9s. Reason: PENDING
2024-07-12 10:52:30,236 Sleeping for 6s. Reason: RUNNING
2024-07-12 10:52:36,659 Sleeping for 7s. Reason: RUNNING
2024-07-12 10:52:44,072 Sleeping for 5s. Reason: RUNNING
2024-07-12 10:52:49,506 Sleeping for 10s. Reason: RUNNING
2024-07-12 10:52:59,964 Sleeping for 7s. Reason: RUNNING
2024-07-12 10:53:07,387 Sleeping for 6s. Reason: RUNNING
2024-07-12 10:53:13,798 Sleeping for 10s. Reason: RUNNING
2024-07-12 10:53:24,223 Sleeping for 8s. Reason: RUNNING
2024-07-12 10:53:32,672 Sleeping for 10s. Reason: RUNNING
2024-07-12 10:53:43,089 Sleeping for 6s. Reason: RUNNING
2024-07-12 10:53:52,441 Sleeping for 9s. Reason: PENDING
2024-07-12 10:54:01,875 Sleeping for 6s. Reason: RUNNING
2024-07-12 10:54:08,326 Sleeping for 9s. Reason: RUNNING
2024-07-12 10:54:17,743 Sleeping for 10s. Reason: RUNNING
2024-07-12 10:54:29,368 Setting max_seq=508, max_extra_seq=1591
2024-07-12 10:58:09,887 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=51.7 pTM=0.475 ipTM=0.118
2024-07-12 10:58:15,189 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=51.7 pTM=0.478 ipTM=0.132 tol=9.39
2024-07-12 10:58:20,492 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=51.8 pTM=0.479 ipTM=0.132 tol=5.48
2024-07-12 10:58:25,793 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=51.8 pTM=0.479 ipTM=0.133 tol=3.18
2024-07-12 10:58:31,095 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=52 pTM=0.481 ipTM=0.14 tol=3.3
2024-07-12 10:58:36,392 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=51.9 pTM=0.481 ipTM=0.147 tol=3.13
2024-07-12 10:58:41,694 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=52 pTM=0.481 ipTM=0.146 tol=1.7
2024-07-12 10:58:46,990 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=52.3 pTM=0.48 ipTM=0.149 tol=5.15
2024-07-12 10:58:52,293 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=52.3 pTM=0.481 ipTM=0.161 tol=3.49
2024-07-12 10:58:57,591 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=52.5 pTM=0.483 ipTM=0.193 tol=2.63
2024-07-12 10:59:02,880 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=52.5 pTM=0.485 ipTM=0.234 tol=2.51
2024-07-12 10:59:08,173 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=52.7 pTM=0.487 ipTM=0.258 tol=1.83
2024-07-12 10:59:13,470 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=52.8 pTM=0.486 ipTM=0.251 tol=1.92
2024-07-12 10:59:18,766 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=52.8 pTM=0.487 ipTM=0.272 tol=2.07
2024-07-12 10:59:24,062 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=52.8 pTM=0.484 ipTM=0.249 tol=2.62
2024-07-12 10:59:29,361 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=52.7 pTM=0.484 ipTM=0.253 tol=4.62
2024-07-12 10:59:34,660 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=52.6 pTM=0.485 ipTM=0.259 tol=3.88
2024-07-12 10:59:39,958 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=52.6 pTM=0.485 ipTM=0.269 tol=2.08
2024-07-12 10:59:45,257 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=52.7 pTM=0.487 ipTM=0.293 tol=1.68
2024-07-12 10:59:50,559 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=52.6 pTM=0.485 ipTM=0.267 tol=2.08
2024-07-12 10:59:55,858 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=52.7 pTM=0.486 ipTM=0.281 tol=1.52
2024-07-12 11:00:01,160 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=52.8 pTM=0.486 ipTM=0.291 tol=2.79
2024-07-12 11:00:06,460 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=52.7 pTM=0.486 ipTM=0.295 tol=2.46
2024-07-12 11:00:11,758 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=52.4 pTM=0.486 ipTM=0.273 tol=2.41
2024-07-12 11:00:17,056 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=52.3 pTM=0.487 ipTM=0.293 tol=1.46
2024-07-12 11:00:22,350 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=52.4 pTM=0.487 ipTM=0.287 tol=1.16
2024-07-12 11:00:27,652 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=52.6 pTM=0.488 ipTM=0.302 tol=1.55
2024-07-12 11:00:32,953 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=52.6 pTM=0.487 ipTM=0.299 tol=1.56
2024-07-12 11:00:38,250 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=52.6 pTM=0.485 ipTM=0.279 tol=1.21
2024-07-12 11:00:43,548 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=52.5 pTM=0.485 ipTM=0.272 tol=5.94
2024-07-12 11:00:48,846 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=52.4 pTM=0.485 ipTM=0.258 tol=3.85
2024-07-12 11:00:48,846 alphafold2_multimer_v3_model_1_seed_000 took 318.2s (30 recycles)
2024-07-12 11:00:54,326 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=52 pTM=0.474 ipTM=0.107
2024-07-12 11:00:59,646 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=52.5 pTM=0.479 ipTM=0.144 tol=9.46
2024-07-12 11:01:04,955 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=52.7 pTM=0.479 ipTM=0.127 tol=6.18
2024-07-12 11:01:10,263 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=52.6 pTM=0.479 ipTM=0.134 tol=3.19
2024-07-12 11:01:15,574 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=52.6 pTM=0.48 ipTM=0.13 tol=2.72
2024-07-12 11:01:20,877 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=52.5 pTM=0.48 ipTM=0.152 tol=2.37
2024-07-12 11:01:26,184 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=52.5 pTM=0.479 ipTM=0.142 tol=2.4
2024-07-12 11:01:31,489 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=52.5 pTM=0.479 ipTM=0.148 tol=1.64
2024-07-12 11:01:36,802 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=52.5 pTM=0.479 ipTM=0.152 tol=2.39
2024-07-12 11:01:42,107 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=52.4 pTM=0.479 ipTM=0.152 tol=1.97
2024-07-12 11:01:47,420 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=52.4 pTM=0.479 ipTM=0.152 tol=2.03
2024-07-12 11:01:52,730 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=52.5 pTM=0.479 ipTM=0.154 tol=2.82
2024-07-12 11:01:58,043 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=52.5 pTM=0.479 ipTM=0.147 tol=2.21
2024-07-12 11:02:03,353 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=52.5 pTM=0.48 ipTM=0.155 tol=2.62
2024-07-12 11:02:08,661 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=52.6 pTM=0.478 ipTM=0.149 tol=3.82
2024-07-12 11:02:13,971 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=52.5 pTM=0.479 ipTM=0.154 tol=3.91
2024-07-12 11:02:19,284 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=52.4 pTM=0.478 ipTM=0.155 tol=3.04
2024-07-12 11:02:24,594 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=52.5 pTM=0.479 ipTM=0.151 tol=4.48
2024-07-12 11:02:29,909 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=52.6 pTM=0.481 ipTM=0.152 tol=2.22
2024-07-12 11:02:35,224 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=52.6 pTM=0.48 ipTM=0.146 tol=1.84
2024-07-12 11:02:40,532 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=52.6 pTM=0.482 ipTM=0.151 tol=3.05
2024-07-12 11:02:45,846 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=52.7 pTM=0.482 ipTM=0.154 tol=2.8
2024-07-12 11:02:51,158 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=52.7 pTM=0.481 ipTM=0.15 tol=1.81
2024-07-12 11:02:56,466 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=52.6 pTM=0.481 ipTM=0.151 tol=1.33
2024-07-12 11:03:01,770 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=52.6 pTM=0.481 ipTM=0.139 tol=1.23
2024-07-12 11:03:07,076 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=52.7 pTM=0.482 ipTM=0.152 tol=1.5
2024-07-12 11:03:12,380 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=52.8 pTM=0.482 ipTM=0.15 tol=1.18
2024-07-12 11:03:17,690 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=52.7 pTM=0.482 ipTM=0.15 tol=1.13
2024-07-12 11:03:22,998 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=52.8 pTM=0.48 ipTM=0.145 tol=1.5
2024-07-12 11:03:28,303 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=52.7 pTM=0.482 ipTM=0.156 tol=1.07
2024-07-12 11:03:33,611 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=52.8 pTM=0.481 ipTM=0.147 tol=1.16
2024-07-12 11:03:33,611 alphafold2_multimer_v3_model_2_seed_000 took 164.6s (30 recycles)
2024-07-12 11:03:39,107 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=51.8 pTM=0.488 ipTM=0.149
2024-07-12 11:03:44,442 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=52.2 pTM=0.488 ipTM=0.179 tol=11.8
2024-07-12 11:03:49,765 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=52.6 pTM=0.497 ipTM=0.206 tol=7.85
2024-07-12 11:03:55,084 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=52.7 pTM=0.502 ipTM=0.289 tol=4.54
2024-07-12 11:04:00,407 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=52.4 pTM=0.498 ipTM=0.203 tol=2.08
2024-07-12 11:04:05,724 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=52.5 pTM=0.498 ipTM=0.181 tol=2.85
2024-07-12 11:04:11,044 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=52.4 pTM=0.497 ipTM=0.224 tol=1.2
2024-07-12 11:04:16,361 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=52.2 pTM=0.493 ipTM=0.186 tol=1.57
2024-07-12 11:04:21,690 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=52.5 pTM=0.495 ipTM=0.212 tol=1.9
2024-07-12 11:04:27,020 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=52.2 pTM=0.494 ipTM=0.206 tol=1.86
2024-07-12 11:04:32,343 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=52.4 pTM=0.496 ipTM=0.234 tol=1.62
2024-07-12 11:04:37,668 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=52.3 pTM=0.493 ipTM=0.201 tol=1.62
2024-07-12 11:04:42,994 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=52.3 pTM=0.492 ipTM=0.194 tol=1.7
2024-07-12 11:04:48,317 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=52.2 pTM=0.492 ipTM=0.219 tol=1.82
2024-07-12 11:04:53,641 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=52.2 pTM=0.49 ipTM=0.214 tol=1.75
2024-07-12 11:04:58,964 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=52.2 pTM=0.492 ipTM=0.235 tol=1.22
2024-07-12 11:05:04,292 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=52 pTM=0.489 ipTM=0.19 tol=0.942
2024-07-12 11:05:09,614 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=52.2 pTM=0.491 ipTM=0.236 tol=1.51
2024-07-12 11:05:14,942 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=52.1 pTM=0.49 ipTM=0.203 tol=1.46
2024-07-12 11:05:20,266 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=52.2 pTM=0.493 ipTM=0.23 tol=2.33
2024-07-12 11:05:25,591 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=52.2 pTM=0.49 ipTM=0.211 tol=2.37
2024-07-12 11:05:30,916 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=52.1 pTM=0.494 ipTM=0.228 tol=2.59
2024-07-12 11:05:36,245 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=52.2 pTM=0.497 ipTM=0.207 tol=1.63
2024-07-12 11:05:41,565 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=52.1 pTM=0.497 ipTM=0.231 tol=1.19
2024-07-12 11:05:46,881 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=52 pTM=0.498 ipTM=0.211 tol=1.23
2024-07-12 11:05:52,199 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=52.3 pTM=0.498 ipTM=0.223 tol=0.838
2024-07-12 11:05:57,518 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=52.2 pTM=0.498 ipTM=0.208 tol=0.849
2024-07-12 11:06:02,838 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=52.4 pTM=0.499 ipTM=0.242 tol=0.915
2024-07-12 11:06:08,153 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=52.2 pTM=0.496 ipTM=0.199 tol=1.01
2024-07-12 11:06:13,466 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=52.2 pTM=0.495 ipTM=0.224 tol=1.3
2024-07-12 11:06:18,786 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=52.2 pTM=0.494 ipTM=0.204 tol=1.04
2024-07-12 11:06:18,786 alphafold2_multimer_v3_model_3_seed_000 took 165.0s (30 recycles)
2024-07-12 11:06:24,265 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=52.6 pTM=0.505 ipTM=0.287
2024-07-12 11:06:29,586 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=54.1 pTM=0.512 ipTM=0.493 tol=9.15
2024-07-12 11:06:34,909 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=53.3 pTM=0.501 ipTM=0.277 tol=7.99
2024-07-12 11:06:40,226 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=53.3 pTM=0.506 ipTM=0.215 tol=6.93
2024-07-12 11:06:45,545 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=54.5 pTM=0.521 ipTM=0.417 tol=4.14
2024-07-12 11:06:50,858 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=54.2 pTM=0.521 ipTM=0.368 tol=3.29
2024-07-12 11:06:56,173 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=54.6 pTM=0.527 ipTM=0.289 tol=2.17
2024-07-12 11:07:01,486 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=54.8 pTM=0.528 ipTM=0.449 tol=2.6
2024-07-12 11:07:06,802 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=54.8 pTM=0.524 ipTM=0.355 tol=2.03
2024-07-12 11:07:12,116 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=54.8 pTM=0.525 ipTM=0.297 tol=2.21
2024-07-12 11:07:17,432 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=55.1 pTM=0.528 ipTM=0.421 tol=1.58
2024-07-12 11:07:22,752 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=55 pTM=0.526 ipTM=0.417 tol=1.23
2024-07-12 11:07:28,072 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=55.1 pTM=0.526 ipTM=0.361 tol=1.87
2024-07-12 11:07:33,385 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=55 pTM=0.527 ipTM=0.443 tol=1.84
2024-07-12 11:07:38,698 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=54.6 pTM=0.524 ipTM=0.314 tol=1.64
2024-07-12 11:07:44,015 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=54.4 pTM=0.521 ipTM=0.224 tol=3.77
2024-07-12 11:07:49,323 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=54.8 pTM=0.525 ipTM=0.33 tol=3.46
2024-07-12 11:07:54,637 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=54.1 pTM=0.518 ipTM=0.215 tol=1.87
2024-07-12 11:07:59,952 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=54.1 pTM=0.524 ipTM=0.229 tol=2.96
2024-07-12 11:08:05,258 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=55.2 pTM=0.535 ipTM=0.579 tol=2.31
2024-07-12 11:08:10,570 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=54.7 pTM=0.523 ipTM=0.325 tol=2.8
2024-07-12 11:08:15,884 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=54.5 pTM=0.527 ipTM=0.267 tol=1.8
2024-07-12 11:08:21,200 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=54.5 pTM=0.526 ipTM=0.314 tol=2.29
2024-07-12 11:08:26,508 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=54.2 pTM=0.529 ipTM=0.256 tol=2.38
2024-07-12 11:08:31,821 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=54.3 pTM=0.524 ipTM=0.332 tol=2.47
2024-07-12 11:08:37,131 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=54.3 pTM=0.528 ipTM=0.276 tol=1.89
2024-07-12 11:08:42,448 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=54.4 pTM=0.521 ipTM=0.315 tol=2.14
2024-07-12 11:08:47,764 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=54.3 pTM=0.525 ipTM=0.247 tol=1.74
2024-07-12 11:08:53,078 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=54.2 pTM=0.523 ipTM=0.301 tol=1.6
2024-07-12 11:08:58,385 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=54.1 pTM=0.529 ipTM=0.261 tol=1.92
2024-07-12 11:09:03,700 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=54.4 pTM=0.523 ipTM=0.339 tol=2.75
2024-07-12 11:09:03,700 alphafold2_multimer_v3_model_4_seed_000 took 164.7s (30 recycles)
2024-07-12 11:09:09,200 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=51.6 pTM=0.48 ipTM=0.167
2024-07-12 11:09:14,553 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=52.2 pTM=0.477 ipTM=0.126 tol=10.3
2024-07-12 11:09:19,892 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=52.3 pTM=0.477 ipTM=0.124 tol=9.36
2024-07-12 11:09:25,227 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=52.1 pTM=0.48 ipTM=0.158 tol=8.94
2024-07-12 11:09:30,566 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=52.2 pTM=0.488 ipTM=0.269 tol=6.76
2024-07-12 11:09:35,903 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=52 pTM=0.485 ipTM=0.203 tol=3.72
2024-07-12 11:09:41,244 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=52.3 pTM=0.487 ipTM=0.192 tol=5.89
2024-07-12 11:09:46,580 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=52.7 pTM=0.495 ipTM=0.264 tol=4.2
2024-07-12 11:09:51,917 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=52.7 pTM=0.494 ipTM=0.233 tol=3.7
2024-07-12 11:09:57,255 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=52.9 pTM=0.494 ipTM=0.205 tol=2.58
2024-07-12 11:10:02,595 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=52.7 pTM=0.496 ipTM=0.24 tol=2.27
2024-07-12 11:10:07,933 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=52.8 pTM=0.496 ipTM=0.245 tol=3.34
2024-07-12 11:10:13,269 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=52.8 pTM=0.495 ipTM=0.22 tol=1.75
2024-07-12 11:10:18,606 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=52.7 pTM=0.496 ipTM=0.231 tol=1.94
2024-07-12 11:10:23,951 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=52.8 pTM=0.496 ipTM=0.227 tol=2.61
2024-07-12 11:10:29,290 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=52.8 pTM=0.495 ipTM=0.228 tol=3.13
2024-07-12 11:10:34,628 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=52.7 pTM=0.495 ipTM=0.211 tol=1.41
2024-07-12 11:10:39,956 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=52.6 pTM=0.494 ipTM=0.235 tol=1.3
2024-07-12 11:10:45,296 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=52.7 pTM=0.494 ipTM=0.221 tol=2.86
2024-07-12 11:10:50,636 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=52.8 pTM=0.496 ipTM=0.226 tol=2.91
2024-07-12 11:10:55,973 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=52.8 pTM=0.495 ipTM=0.231 tol=1.99
2024-07-12 11:11:01,313 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=52.7 pTM=0.495 ipTM=0.22 tol=2.07
2024-07-12 11:11:06,656 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=52.7 pTM=0.495 ipTM=0.23 tol=2.3
2024-07-12 11:11:12,000 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=52.9 pTM=0.496 ipTM=0.233 tol=2.01
2024-07-12 11:11:17,333 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=52.5 pTM=0.495 ipTM=0.235 tol=2.62
2024-07-12 11:11:22,667 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=52.8 pTM=0.496 ipTM=0.218 tol=2.12
2024-07-12 11:11:28,005 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=52.8 pTM=0.495 ipTM=0.233 tol=2.52
2024-07-12 11:11:33,346 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=52.8 pTM=0.497 ipTM=0.231 tol=1.88
2024-07-12 11:11:38,684 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=52.8 pTM=0.495 ipTM=0.218 tol=2.47
2024-07-12 11:11:44,022 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=52.8 pTM=0.498 ipTM=0.255 tol=1.84
2024-07-12 11:11:49,359 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=52.6 pTM=0.495 ipTM=0.244 tol=3.22
2024-07-12 11:11:49,359 alphafold2_multimer_v3_model_5_seed_000 took 165.5s (30 recycles)
2024-07-12 11:11:51,566 reranking models by 'multimer' metric
2024-07-12 11:12:01,228 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 11:12:32,686 Relaxation took 41.1s
2024-07-12 11:12:32,686 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=54.4 pTM=0.523 ipTM=0.339
2024-07-12 11:12:53,681 Relaxation took 21.0s
2024-07-12 11:12:53,681 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=52.4 pTM=0.485 ipTM=0.258
2024-07-12 11:13:21,331 Relaxation took 27.6s
2024-07-12 11:13:21,331 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=52.6 pTM=0.495 ipTM=0.244
2024-07-12 11:13:51,835 Relaxation took 30.5s
2024-07-12 11:13:51,835 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=52.2 pTM=0.494 ipTM=0.204
2024-07-12 11:14:26,096 Relaxation took 34.3s
2024-07-12 11:14:26,096 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=52.8 pTM=0.481 ipTM=0.147
2024-07-12 11:14:27,147 Done