2024-07-12 11:15:25,085 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-12 11:15:25,390 Running on GPU 2024-07-12 11:15:26,866 Found 6 citations for tools or databases 2024-07-12 11:15:26,866 Query 1/1: PSA4_LORF1 (length 599) 2024-07-12 11:15:27,320 Sleeping for 7s. Reason: PENDING 2024-07-12 11:15:34,751 Sleeping for 8s. Reason: RUNNING 2024-07-12 11:15:43,184 Sleeping for 10s. Reason: RUNNING 2024-07-12 11:15:53,595 Sleeping for 5s. Reason: RUNNING 2024-07-12 11:15:59,025 Sleeping for 10s. Reason: RUNNING 2024-07-12 11:16:09,498 Sleeping for 9s. Reason: RUNNING 2024-07-12 11:16:20,593 Sleeping for 9s. Reason: PENDING 2024-07-12 11:16:30,032 Sleeping for 6s. Reason: RUNNING 2024-07-12 11:16:36,459 Sleeping for 5s. Reason: RUNNING 2024-07-12 11:16:41,888 Sleeping for 8s. Reason: RUNNING 2024-07-12 11:16:52,114 Setting max_seq=508, max_extra_seq=2048 2024-07-12 11:19:43,618 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=68.6 pTM=0.423 ipTM=0.173 2024-07-12 11:19:50,798 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=69.7 pTM=0.408 ipTM=0.156 tol=7 2024-07-12 11:19:57,995 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=68.9 pTM=0.397 ipTM=0.157 tol=2.74 2024-07-12 11:20:05,196 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=69.4 pTM=0.403 ipTM=0.157 tol=1.83 2024-07-12 11:20:12,395 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=70.4 pTM=0.415 ipTM=0.156 tol=1.41 2024-07-12 11:20:19,584 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=71.2 pTM=0.423 ipTM=0.163 tol=1.19 2024-07-12 11:20:26,768 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=71.2 pTM=0.42 ipTM=0.159 tol=1.33 2024-07-12 11:20:33,968 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=71.2 pTM=0.414 ipTM=0.155 tol=1.9 2024-07-12 11:20:41,165 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=70.8 pTM=0.413 ipTM=0.155 tol=1.2 2024-07-12 11:20:48,366 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=71.4 pTM=0.42 ipTM=0.166 tol=1.85 2024-07-12 11:20:55,567 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=71.8 pTM=0.421 ipTM=0.151 tol=1.83 2024-07-12 11:21:02,776 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=71.6 pTM=0.422 ipTM=0.166 tol=1.08 2024-07-12 11:21:09,981 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=72.1 pTM=0.424 ipTM=0.16 tol=1.27 2024-07-12 11:21:17,192 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=71.9 pTM=0.423 ipTM=0.165 tol=1.21 2024-07-12 11:21:24,402 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=71.6 pTM=0.421 ipTM=0.16 tol=0.879 2024-07-12 11:21:31,619 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=70.7 pTM=0.41 ipTM=0.166 tol=1.71 2024-07-12 11:21:38,830 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=71.4 pTM=0.418 ipTM=0.159 tol=0.722 2024-07-12 11:21:46,038 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=71.4 pTM=0.42 ipTM=0.17 tol=1.28 2024-07-12 11:21:53,264 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=71.1 pTM=0.409 ipTM=0.158 tol=0.916 2024-07-12 11:22:00,486 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=72.8 pTM=0.425 ipTM=0.159 tol=1.48 2024-07-12 11:22:07,707 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=71.9 pTM=0.424 ipTM=0.163 tol=1.8 2024-07-12 11:22:14,936 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=70.7 pTM=0.414 ipTM=0.17 tol=1.35 2024-07-12 11:22:22,158 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=70.9 pTM=0.409 ipTM=0.16 tol=2.05 2024-07-12 11:22:29,385 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=71.2 pTM=0.415 ipTM=0.165 tol=2.1 2024-07-12 11:22:36,616 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=71.4 pTM=0.417 ipTM=0.159 tol=1.05 2024-07-12 11:22:43,843 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=71 pTM=0.414 ipTM=0.162 tol=0.793 2024-07-12 11:22:51,070 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=72.1 pTM=0.422 ipTM=0.156 tol=1.04 2024-07-12 11:22:58,299 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=72.2 pTM=0.428 ipTM=0.167 tol=1.59 2024-07-12 11:23:05,509 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=72.4 pTM=0.425 ipTM=0.158 tol=2.25 2024-07-12 11:23:12,725 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=72.1 pTM=0.423 ipTM=0.163 tol=1.43 2024-07-12 11:23:19,943 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=72.4 pTM=0.423 ipTM=0.162 tol=1.44 2024-07-12 11:23:19,943 alphafold2_multimer_v3_model_1_seed_000 took 376.1s (30 recycles) 2024-07-12 11:23:27,406 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=68.1 pTM=0.402 ipTM=0.152 2024-07-12 11:23:34,630 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=71.4 pTM=0.41 ipTM=0.149 tol=8.43 2024-07-12 11:23:41,854 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=71.6 pTM=0.403 ipTM=0.143 tol=4.01 2024-07-12 11:23:49,081 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=72.2 pTM=0.409 ipTM=0.149 tol=2.46 2024-07-12 11:23:56,328 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=72.8 pTM=0.409 ipTM=0.138 tol=1.42 2024-07-12 11:24:03,576 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=73.2 pTM=0.413 ipTM=0.137 tol=2.05 2024-07-12 11:24:10,826 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=74 pTM=0.418 ipTM=0.138 tol=1.56 2024-07-12 11:24:18,072 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=73.3 pTM=0.409 ipTM=0.13 tol=1.91 2024-07-12 11:24:25,319 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=73.8 pTM=0.414 ipTM=0.135 tol=1.88 2024-07-12 11:24:32,560 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=73.4 pTM=0.415 ipTM=0.146 tol=1.95 2024-07-12 11:24:39,806 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=73.8 pTM=0.417 ipTM=0.138 tol=1.26 2024-07-12 11:24:47,049 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=73.6 pTM=0.416 ipTM=0.139 tol=1.11 2024-07-12 11:24:54,280 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=73.9 pTM=0.417 ipTM=0.135 tol=1.45 2024-07-12 11:25:01,525 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=73.9 pTM=0.417 ipTM=0.137 tol=2.95 2024-07-12 11:25:08,765 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=73.8 pTM=0.417 ipTM=0.135 tol=5.14 2024-07-12 11:25:16,003 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=73.6 pTM=0.415 ipTM=0.134 tol=3.57 2024-07-12 11:25:23,235 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=73.1 pTM=0.415 ipTM=0.137 tol=1.66 2024-07-12 11:25:30,464 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=73.7 pTM=0.421 ipTM=0.149 tol=0.927 2024-07-12 11:25:37,697 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=73.6 pTM=0.416 ipTM=0.142 tol=0.596 2024-07-12 11:25:44,931 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=74.1 pTM=0.42 ipTM=0.139 tol=0.88 2024-07-12 11:25:52,153 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=73.4 pTM=0.417 ipTM=0.145 tol=1.53 2024-07-12 11:25:59,390 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=72.7 pTM=0.406 ipTM=0.145 tol=0.874 2024-07-12 11:26:06,626 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=72.8 pTM=0.405 ipTM=0.144 tol=1.01 2024-07-12 11:26:13,864 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=73.1 pTM=0.409 ipTM=0.142 tol=0.412 2024-07-12 11:26:13,865 alphafold2_multimer_v3_model_2_seed_000 took 173.7s (23 recycles) 2024-07-12 11:26:21,333 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=67.9 pTM=0.428 ipTM=0.187 2024-07-12 11:26:28,567 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=68.4 pTM=0.41 ipTM=0.152 tol=6.35 2024-07-12 11:26:35,803 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=69.2 pTM=0.412 ipTM=0.162 tol=3.63 2024-07-12 11:26:43,039 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=69.6 pTM=0.412 ipTM=0.137 tol=2.22 2024-07-12 11:26:50,271 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=70 pTM=0.422 ipTM=0.17 tol=2.33 2024-07-12 11:26:57,511 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=69.7 pTM=0.412 ipTM=0.139 tol=1.68 2024-07-12 11:27:04,748 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=70.4 pTM=0.422 ipTM=0.164 tol=1.46 2024-07-12 11:27:11,987 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=69.9 pTM=0.412 ipTM=0.141 tol=1.31 2024-07-12 11:27:19,229 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=69.9 pTM=0.418 ipTM=0.163 tol=1.24 2024-07-12 11:27:26,473 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=69.8 pTM=0.413 ipTM=0.147 tol=1.42 2024-07-12 11:27:33,710 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=70.6 pTM=0.425 ipTM=0.166 tol=1.32 2024-07-12 11:27:40,942 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=70.2 pTM=0.417 ipTM=0.15 tol=1.07 2024-07-12 11:27:48,182 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=70.8 pTM=0.427 ipTM=0.167 tol=1.83 2024-07-12 11:27:55,422 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=70.4 pTM=0.42 ipTM=0.152 tol=1.34 2024-07-12 11:28:02,663 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=70.6 pTM=0.423 ipTM=0.161 tol=1.07 2024-07-12 11:28:09,907 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=69.8 pTM=0.413 ipTM=0.142 tol=0.85 2024-07-12 11:28:17,147 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=70 pTM=0.417 ipTM=0.146 tol=0.903 2024-07-12 11:28:24,384 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=69.6 pTM=0.413 ipTM=0.146 tol=0.78 2024-07-12 11:28:31,621 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=70.8 pTM=0.421 ipTM=0.158 tol=1.03 2024-07-12 11:28:38,862 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=70.3 pTM=0.417 ipTM=0.141 tol=1.14 2024-07-12 11:28:46,093 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=70.5 pTM=0.422 ipTM=0.155 tol=0.903 2024-07-12 11:28:53,331 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=70.2 pTM=0.416 ipTM=0.148 tol=1.39 2024-07-12 11:29:00,566 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=70.3 pTM=0.417 ipTM=0.152 tol=1.02 2024-07-12 11:29:07,803 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=69.8 pTM=0.414 ipTM=0.146 tol=1.71 2024-07-12 11:29:15,042 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=70.3 pTM=0.419 ipTM=0.151 tol=1.6 2024-07-12 11:29:22,280 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=70.2 pTM=0.416 ipTM=0.149 tol=0.805 2024-07-12 11:29:29,518 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=70.7 pTM=0.424 ipTM=0.161 tol=0.962 2024-07-12 11:29:36,759 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=70.4 pTM=0.419 ipTM=0.146 tol=1.62 2024-07-12 11:29:43,991 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=70.5 pTM=0.423 ipTM=0.149 tol=2.07 2024-07-12 11:29:51,234 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=70.3 pTM=0.419 ipTM=0.147 tol=0.98 2024-07-12 11:29:58,472 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=70.2 pTM=0.416 ipTM=0.147 tol=0.634 2024-07-12 11:29:58,473 alphafold2_multimer_v3_model_3_seed_000 took 224.4s (30 recycles) 2024-07-12 11:30:05,943 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=66.4 pTM=0.411 ipTM=0.167 2024-07-12 11:30:13,183 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=68.1 pTM=0.414 ipTM=0.149 tol=4.64 2024-07-12 11:30:20,423 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=70.1 pTM=0.423 ipTM=0.181 tol=3.62 2024-07-12 11:30:27,662 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=69.2 pTM=0.42 ipTM=0.15 tol=2.15 2024-07-12 11:30:34,902 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=70.9 pTM=0.429 ipTM=0.164 tol=2.34 2024-07-12 11:30:42,143 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=70.4 pTM=0.424 ipTM=0.144 tol=1.28 2024-07-12 11:30:49,381 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=71.4 pTM=0.432 ipTM=0.168 tol=1.19 2024-07-12 11:30:56,624 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=70.6 pTM=0.425 ipTM=0.14 tol=1.05 2024-07-12 11:31:03,868 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=71.1 pTM=0.432 ipTM=0.158 tol=1.12 2024-07-12 11:31:11,110 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=70.4 pTM=0.425 ipTM=0.136 tol=1.85 2024-07-12 11:31:18,356 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=71.4 pTM=0.433 ipTM=0.162 tol=1.53 2024-07-12 11:31:25,611 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=70.9 pTM=0.428 ipTM=0.137 tol=1.73 2024-07-12 11:31:32,855 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=71.8 pTM=0.435 ipTM=0.168 tol=1.62 2024-07-12 11:31:40,107 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.8 pTM=0.429 ipTM=0.14 tol=1.35 2024-07-12 11:31:47,351 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=71.1 pTM=0.431 ipTM=0.161 tol=0.842 2024-07-12 11:31:54,600 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.5 pTM=0.425 ipTM=0.141 tol=1.66 2024-07-12 11:32:01,848 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.8 pTM=0.429 ipTM=0.154 tol=1.33 2024-07-12 11:32:09,097 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=70.4 pTM=0.425 ipTM=0.138 tol=1.11 2024-07-12 11:32:16,333 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=71.8 pTM=0.431 ipTM=0.158 tol=2.13 2024-07-12 11:32:23,576 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70.9 pTM=0.427 ipTM=0.141 tol=2.78 2024-07-12 11:32:30,826 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=71.2 pTM=0.432 ipTM=0.156 tol=1.1 2024-07-12 11:32:38,069 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=70.6 pTM=0.427 ipTM=0.136 tol=2.36 2024-07-12 11:32:45,307 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=71.3 pTM=0.43 ipTM=0.151 tol=1.79 2024-07-12 11:32:52,547 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=70.8 pTM=0.428 ipTM=0.143 tol=2.05 2024-07-12 11:32:59,795 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=71.2 pTM=0.429 ipTM=0.148 tol=1.49 2024-07-12 11:33:07,034 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=71.1 pTM=0.428 ipTM=0.146 tol=1.57 2024-07-12 11:33:14,282 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.9 pTM=0.429 ipTM=0.151 tol=1.48 2024-07-12 11:33:21,529 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=71.1 pTM=0.429 ipTM=0.148 tol=1.65 2024-07-12 11:33:28,780 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=71.2 pTM=0.429 ipTM=0.144 tol=2.5 2024-07-12 11:33:36,028 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=70.7 pTM=0.427 ipTM=0.144 tol=2.11 2024-07-12 11:33:43,275 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=71.1 pTM=0.43 ipTM=0.149 tol=1.54 2024-07-12 11:33:43,275 alphafold2_multimer_v3_model_4_seed_000 took 224.6s (30 recycles) 2024-07-12 11:33:50,756 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=65.4 pTM=0.406 ipTM=0.131 2024-07-12 11:33:57,998 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=64.6 pTM=0.393 ipTM=0.135 tol=9.96 2024-07-12 11:34:05,241 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=66.8 pTM=0.4 ipTM=0.143 tol=4.08 2024-07-12 11:34:12,479 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=66.5 pTM=0.399 ipTM=0.14 tol=4.62 2024-07-12 11:34:19,718 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=66.4 pTM=0.4 ipTM=0.144 tol=2.71 2024-07-12 11:34:26,959 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=64.8 pTM=0.39 ipTM=0.137 tol=3.01 2024-07-12 11:34:34,203 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=66.6 pTM=0.397 ipTM=0.141 tol=3.87 2024-07-12 11:34:41,448 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=65.9 pTM=0.392 ipTM=0.131 tol=2.21 2024-07-12 11:34:48,687 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=65.8 pTM=0.395 ipTM=0.138 tol=4.35 2024-07-12 11:34:55,930 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=65.8 pTM=0.391 ipTM=0.137 tol=5.15 2024-07-12 11:35:03,175 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=65.9 pTM=0.393 ipTM=0.14 tol=4.55 2024-07-12 11:35:10,422 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=65.9 pTM=0.392 ipTM=0.14 tol=1.85 2024-07-12 11:35:17,664 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=66.9 pTM=0.399 ipTM=0.142 tol=3.42 2024-07-12 11:35:24,912 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=66.3 pTM=0.394 ipTM=0.136 tol=1.55 2024-07-12 11:35:32,156 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=66.2 pTM=0.393 ipTM=0.138 tol=3.26 2024-07-12 11:35:39,396 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=65.2 pTM=0.388 ipTM=0.131 tol=4.37 2024-07-12 11:35:46,641 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=66 pTM=0.395 ipTM=0.14 tol=1.98 2024-07-12 11:35:53,884 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=64.5 pTM=0.385 ipTM=0.137 tol=1.91 2024-07-12 11:36:01,117 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=66.3 pTM=0.395 ipTM=0.146 tol=1.46 2024-07-12 11:36:08,360 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=66.5 pTM=0.396 ipTM=0.135 tol=2.51 2024-07-12 11:36:15,598 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=66.4 pTM=0.396 ipTM=0.14 tol=3.29 2024-07-12 11:36:22,839 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=65.8 pTM=0.391 ipTM=0.138 tol=4.95 2024-07-12 11:36:30,076 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=66.2 pTM=0.389 ipTM=0.139 tol=3.23 2024-07-12 11:36:37,309 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=65.9 pTM=0.391 ipTM=0.146 tol=3.46 2024-07-12 11:36:44,544 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=65.8 pTM=0.389 ipTM=0.141 tol=1.71 2024-07-12 11:36:51,776 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65.8 pTM=0.389 ipTM=0.139 tol=3.17 2024-07-12 11:36:59,013 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=66.4 pTM=0.392 ipTM=0.141 tol=2.47 2024-07-12 11:37:06,251 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=65.7 pTM=0.388 ipTM=0.139 tol=1.59 2024-07-12 11:37:13,490 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=66.2 pTM=0.389 ipTM=0.136 tol=2.5 2024-07-12 11:37:20,730 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=65.9 pTM=0.387 ipTM=0.138 tol=4.97 2024-07-12 11:37:27,971 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=65.1 pTM=0.383 ipTM=0.138 tol=3.31 2024-07-12 11:37:27,971 alphafold2_multimer_v3_model_5_seed_000 took 224.5s (30 recycles) 2024-07-12 11:37:29,062 reranking models by 'multimer' metric 2024-07-12 11:37:33,360 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-12 11:38:08,867 Relaxation took 39.8s 2024-07-12 11:38:08,867 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=72.4 pTM=0.423 ipTM=0.162 2024-07-12 11:38:33,933 Relaxation took 25.1s 2024-07-12 11:38:33,933 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=71.1 pTM=0.43 ipTM=0.149 2024-07-12 11:39:21,550 Relaxation took 47.6s 2024-07-12 11:39:21,550 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=70.2 pTM=0.416 ipTM=0.147 2024-07-12 11:39:41,656 Relaxation took 20.1s 2024-07-12 11:39:41,656 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=73.1 pTM=0.409 ipTM=0.142 2024-07-12 11:40:12,999 Relaxation took 31.3s 2024-07-12 11:40:12,999 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=65.1 pTM=0.383 ipTM=0.138 2024-07-12 11:40:14,152 Done