2024-07-12 11:18:24,946 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-12 11:18:25,274 Running on GPU 2024-07-12 11:18:29,227 Found 6 citations for tools or databases 2024-07-12 11:18:29,227 Query 1/1: PSA6_ANKR2 (length 606) 2024-07-12 11:18:29,692 Sleeping for 5s. Reason: PENDING 2024-07-12 11:18:35,105 Sleeping for 8s. Reason: RUNNING 2024-07-12 11:18:43,532 Sleeping for 6s. Reason: RUNNING 2024-07-12 11:18:49,958 Sleeping for 6s. Reason: RUNNING 2024-07-12 11:18:56,382 Sleeping for 7s. Reason: RUNNING 2024-07-12 11:19:03,799 Sleeping for 10s. Reason: RUNNING 2024-07-12 11:19:14,226 Sleeping for 6s. Reason: RUNNING 2024-07-12 11:19:20,640 Sleeping for 7s. Reason: RUNNING 2024-07-12 11:19:28,046 Sleeping for 6s. Reason: RUNNING 2024-07-12 11:19:34,459 Sleeping for 6s. Reason: RUNNING 2024-07-12 11:19:40,897 Sleeping for 5s. Reason: RUNNING 2024-07-12 11:19:46,320 Sleeping for 5s. Reason: RUNNING 2024-07-12 11:19:51,766 Sleeping for 7s. Reason: RUNNING 2024-07-12 11:20:00,856 Sleeping for 10s. Reason: PENDING 2024-07-12 11:20:11,282 Sleeping for 8s. Reason: RUNNING 2024-07-12 11:20:19,698 Sleeping for 8s. Reason: RUNNING 2024-07-12 11:20:28,121 Sleeping for 8s. Reason: RUNNING 2024-07-12 11:20:36,564 Sleeping for 6s. Reason: RUNNING 2024-07-12 11:20:43,007 Sleeping for 9s. Reason: RUNNING 2024-07-12 11:20:54,767 Setting max_seq=508, max_extra_seq=2048 2024-07-12 11:23:51,204 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=63.1 pTM=0.425 ipTM=0.208 2024-07-12 11:23:58,812 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=65.7 pTM=0.441 ipTM=0.247 tol=6.23 2024-07-12 11:24:06,423 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66 pTM=0.429 ipTM=0.228 tol=4.36 2024-07-12 11:24:14,038 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=66.4 pTM=0.438 ipTM=0.247 tol=2.16 2024-07-12 11:24:21,684 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=67.3 pTM=0.454 ipTM=0.271 tol=1.5 2024-07-12 11:24:29,310 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=67.8 pTM=0.459 ipTM=0.25 tol=3.07 2024-07-12 11:24:36,954 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=68.5 pTM=0.479 ipTM=0.3 tol=2.39 2024-07-12 11:24:44,618 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=69.1 pTM=0.47 ipTM=0.286 tol=2.5 2024-07-12 11:24:52,267 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=68.4 pTM=0.462 ipTM=0.273 tol=2.11 2024-07-12 11:24:59,925 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=69.7 pTM=0.491 ipTM=0.338 tol=3.08 2024-07-12 11:25:07,595 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=70 pTM=0.497 ipTM=0.352 tol=1.05 2024-07-12 11:25:15,253 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=69.6 pTM=0.49 ipTM=0.34 tol=0.96 2024-07-12 11:25:22,915 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=69.9 pTM=0.51 ipTM=0.389 tol=1.12 2024-07-12 11:25:30,594 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=70.5 pTM=0.523 ipTM=0.418 tol=0.733 2024-07-12 11:25:38,273 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=70.8 pTM=0.525 ipTM=0.421 tol=0.676 2024-07-12 11:25:45,951 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=70.8 pTM=0.533 ipTM=0.443 tol=0.585 2024-07-12 11:25:53,627 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=70.9 pTM=0.537 ipTM=0.455 tol=1.92 2024-07-12 11:26:01,307 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=71.2 pTM=0.548 ipTM=0.475 tol=1.98 2024-07-12 11:26:08,982 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=71.5 pTM=0.558 ipTM=0.496 tol=1.25 2024-07-12 11:26:16,663 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=71.5 pTM=0.562 ipTM=0.509 tol=0.625 2024-07-12 11:26:24,355 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=71.6 pTM=0.558 ipTM=0.498 tol=0.549 2024-07-12 11:26:32,038 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=70.9 pTM=0.526 ipTM=0.426 tol=0.761 2024-07-12 11:26:39,726 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=71 pTM=0.527 ipTM=0.427 tol=0.511 2024-07-12 11:26:47,409 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=70.5 pTM=0.524 ipTM=0.421 tol=0.487 2024-07-12 11:26:47,410 alphafold2_multimer_v3_model_1_seed_000 took 325.4s (23 recycles) 2024-07-12 11:26:55,338 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=65.6 pTM=0.461 ipTM=0.27 2024-07-12 11:27:03,038 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=67.7 pTM=0.448 ipTM=0.245 tol=7.85 2024-07-12 11:27:10,740 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=68.1 pTM=0.444 ipTM=0.233 tol=3.05 2024-07-12 11:27:18,455 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=67.9 pTM=0.429 ipTM=0.221 tol=4.59 2024-07-12 11:27:26,153 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=68.1 pTM=0.446 ipTM=0.257 tol=4.66 2024-07-12 11:27:33,859 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=68.4 pTM=0.435 ipTM=0.232 tol=2.71 2024-07-12 11:27:41,563 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=67.9 pTM=0.437 ipTM=0.24 tol=1.64 2024-07-12 11:27:49,274 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.3 pTM=0.436 ipTM=0.238 tol=1.87 2024-07-12 11:27:56,983 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=68.2 pTM=0.437 ipTM=0.237 tol=1.22 2024-07-12 11:28:04,688 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=68.2 pTM=0.438 ipTM=0.232 tol=1.34 2024-07-12 11:28:12,405 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=68.4 pTM=0.44 ipTM=0.251 tol=1.56 2024-07-12 11:28:20,110 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=68.4 pTM=0.44 ipTM=0.241 tol=1.62 2024-07-12 11:28:27,824 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=68.1 pTM=0.44 ipTM=0.252 tol=1.87 2024-07-12 11:28:35,536 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=67.8 pTM=0.441 ipTM=0.253 tol=4.56 2024-07-12 11:28:43,267 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=68.4 pTM=0.441 ipTM=0.245 tol=5.94 2024-07-12 11:28:50,981 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=67.9 pTM=0.44 ipTM=0.245 tol=2.18 2024-07-12 11:28:58,721 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=68.1 pTM=0.427 ipTM=0.203 tol=4.57 2024-07-12 11:29:06,433 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=68.2 pTM=0.443 ipTM=0.257 tol=3.46 2024-07-12 11:29:14,151 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=68.4 pTM=0.443 ipTM=0.251 tol=1.57 2024-07-12 11:29:21,864 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=67.4 pTM=0.428 ipTM=0.22 tol=2.35 2024-07-12 11:29:29,587 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=68 pTM=0.435 ipTM=0.224 tol=2.03 2024-07-12 11:29:37,311 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=67.8 pTM=0.436 ipTM=0.232 tol=1.9 2024-07-12 11:29:45,043 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=67.9 pTM=0.434 ipTM=0.23 tol=2.26 2024-07-12 11:29:52,763 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=67.8 pTM=0.438 ipTM=0.239 tol=1.72 2024-07-12 11:30:00,499 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=68.1 pTM=0.429 ipTM=0.217 tol=2.07 2024-07-12 11:30:08,212 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=67.9 pTM=0.442 ipTM=0.25 tol=2.3 2024-07-12 11:30:15,928 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=68.2 pTM=0.441 ipTM=0.249 tol=1.35 2024-07-12 11:30:23,645 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=68.4 pTM=0.443 ipTM=0.25 tol=1.33 2024-07-12 11:30:31,372 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=68.3 pTM=0.437 ipTM=0.236 tol=1.84 2024-07-12 11:30:39,088 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=68.3 pTM=0.44 ipTM=0.245 tol=0.989 2024-07-12 11:30:46,812 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=68.4 pTM=0.438 ipTM=0.235 tol=1.13 2024-07-12 11:30:46,813 alphafold2_multimer_v3_model_2_seed_000 took 239.2s (30 recycles) 2024-07-12 11:30:54,725 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=64.1 pTM=0.442 ipTM=0.253 2024-07-12 11:31:02,430 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=67.8 pTM=0.494 ipTM=0.374 tol=6.07 2024-07-12 11:31:10,122 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=67.8 pTM=0.445 ipTM=0.234 tol=2.51 2024-07-12 11:31:17,803 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=67.1 pTM=0.465 ipTM=0.298 tol=1.67 2024-07-12 11:31:25,494 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=67.9 pTM=0.456 ipTM=0.262 tol=1.6 2024-07-12 11:31:33,183 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=68.1 pTM=0.486 ipTM=0.334 tol=1.13 2024-07-12 11:31:40,882 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=68.7 pTM=0.468 ipTM=0.283 tol=1.51 2024-07-12 11:31:48,577 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=68.4 pTM=0.49 ipTM=0.332 tol=2.1 2024-07-12 11:31:56,283 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=69.6 pTM=0.489 ipTM=0.308 tol=2.15 2024-07-12 11:32:03,987 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=69.7 pTM=0.512 ipTM=0.356 tol=1.12 2024-07-12 11:32:11,698 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=70.1 pTM=0.5 ipTM=0.328 tol=0.908 2024-07-12 11:32:19,408 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=70.2 pTM=0.521 ipTM=0.369 tol=1.27 2024-07-12 11:32:27,119 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=70.2 pTM=0.501 ipTM=0.323 tol=1.18 2024-07-12 11:32:34,819 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=70.2 pTM=0.521 ipTM=0.374 tol=1.18 2024-07-12 11:32:42,537 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=70.4 pTM=0.5 ipTM=0.317 tol=0.992 2024-07-12 11:32:50,249 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=69.9 pTM=0.517 ipTM=0.365 tol=1.26 2024-07-12 11:32:57,955 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=70.1 pTM=0.497 ipTM=0.315 tol=1.3 2024-07-12 11:33:05,659 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=69.8 pTM=0.512 ipTM=0.353 tol=1.04 2024-07-12 11:33:13,360 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=69.8 pTM=0.499 ipTM=0.317 tol=1.24 2024-07-12 11:33:21,072 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=70.3 pTM=0.517 ipTM=0.361 tol=1.41 2024-07-12 11:33:28,784 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=70.1 pTM=0.495 ipTM=0.308 tol=0.99 2024-07-12 11:33:36,495 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=70.2 pTM=0.529 ipTM=0.386 tol=1.01 2024-07-12 11:33:44,202 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=70.2 pTM=0.5 ipTM=0.323 tol=1.04 2024-07-12 11:33:51,901 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=69.9 pTM=0.519 ipTM=0.365 tol=0.941 2024-07-12 11:33:59,637 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=70.6 pTM=0.503 ipTM=0.326 tol=0.967 2024-07-12 11:34:07,347 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=70.4 pTM=0.525 ipTM=0.382 tol=0.979 2024-07-12 11:34:15,055 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=70.2 pTM=0.504 ipTM=0.33 tol=1.57 2024-07-12 11:34:22,760 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=70.1 pTM=0.511 ipTM=0.349 tol=1.18 2024-07-12 11:34:30,476 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=70.3 pTM=0.499 ipTM=0.319 tol=1.13 2024-07-12 11:34:38,180 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=70.2 pTM=0.517 ipTM=0.362 tol=1.08 2024-07-12 11:34:45,886 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=70.1 pTM=0.495 ipTM=0.312 tol=0.826 2024-07-12 11:34:45,886 alphafold2_multimer_v3_model_3_seed_000 took 238.8s (30 recycles) 2024-07-12 11:34:53,820 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=63.6 pTM=0.454 ipTM=0.273 2024-07-12 11:35:01,552 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=68.3 pTM=0.552 ipTM=0.471 tol=5.54 2024-07-12 11:35:09,304 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=67.6 pTM=0.443 ipTM=0.238 tol=6.75 2024-07-12 11:35:17,032 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=67.4 pTM=0.462 ipTM=0.296 tol=5.98 2024-07-12 11:35:24,763 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=67.6 pTM=0.458 ipTM=0.285 tol=1.98 2024-07-12 11:35:32,493 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=67.9 pTM=0.466 ipTM=0.304 tol=1.59 2024-07-12 11:35:40,221 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=68 pTM=0.461 ipTM=0.291 tol=1.36 2024-07-12 11:35:47,956 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=68.1 pTM=0.466 ipTM=0.299 tol=1.84 2024-07-12 11:35:55,682 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=67.6 pTM=0.457 ipTM=0.279 tol=1.75 2024-07-12 11:36:03,413 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=68.2 pTM=0.473 ipTM=0.312 tol=2.13 2024-07-12 11:36:11,148 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=68.2 pTM=0.461 ipTM=0.285 tol=2.52 2024-07-12 11:36:18,875 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=67.8 pTM=0.462 ipTM=0.292 tol=2.09 2024-07-12 11:36:26,602 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=68.1 pTM=0.461 ipTM=0.285 tol=1.66 2024-07-12 11:36:34,341 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=67.4 pTM=0.454 ipTM=0.27 tol=2.04 2024-07-12 11:36:42,070 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=67.2 pTM=0.455 ipTM=0.275 tol=1.55 2024-07-12 11:36:49,793 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=66.6 pTM=0.45 ipTM=0.263 tol=1.42 2024-07-12 11:36:57,525 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=66.8 pTM=0.449 ipTM=0.26 tol=1.32 2024-07-12 11:37:05,235 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=66.4 pTM=0.449 ipTM=0.266 tol=1.1 2024-07-12 11:37:12,962 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=66.8 pTM=0.448 ipTM=0.26 tol=0.973 2024-07-12 11:37:20,681 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=66.2 pTM=0.448 ipTM=0.267 tol=1.2 2024-07-12 11:37:28,393 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=66.5 pTM=0.448 ipTM=0.257 tol=1.8 2024-07-12 11:37:36,123 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=66.1 pTM=0.443 ipTM=0.258 tol=2.24 2024-07-12 11:37:43,845 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=65.9 pTM=0.442 ipTM=0.255 tol=2.63 2024-07-12 11:37:51,567 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=66.1 pTM=0.445 ipTM=0.26 tol=1.22 2024-07-12 11:37:59,299 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=66.6 pTM=0.448 ipTM=0.263 tol=1.59 2024-07-12 11:38:07,024 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=65.9 pTM=0.445 ipTM=0.262 tol=1.14 2024-07-12 11:38:14,750 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=66.1 pTM=0.451 ipTM=0.267 tol=1.5 2024-07-12 11:38:22,471 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66 pTM=0.449 ipTM=0.272 tol=0.743 2024-07-12 11:38:30,201 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=66.3 pTM=0.449 ipTM=0.269 tol=0.878 2024-07-12 11:38:37,931 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=66.4 pTM=0.452 ipTM=0.277 tol=1.38 2024-07-12 11:38:45,655 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=66.7 pTM=0.452 ipTM=0.271 tol=1.34 2024-07-12 11:38:45,655 alphafold2_multimer_v3_model_4_seed_000 took 239.5s (30 recycles) 2024-07-12 11:38:53,584 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=62.7 pTM=0.46 ipTM=0.312 2024-07-12 11:39:01,290 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=65.9 pTM=0.427 ipTM=0.182 tol=5.02 2024-07-12 11:39:09,016 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=66.1 pTM=0.426 ipTM=0.176 tol=2.7 2024-07-12 11:39:16,736 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=65.9 pTM=0.442 ipTM=0.204 tol=2.02 2024-07-12 11:39:24,460 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65.6 pTM=0.455 ipTM=0.227 tol=3.6 2024-07-12 11:39:32,197 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=66.6 pTM=0.456 ipTM=0.229 tol=4.43 2024-07-12 11:39:39,925 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=66.5 pTM=0.458 ipTM=0.228 tol=3.84 2024-07-12 11:39:47,648 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=66.6 pTM=0.458 ipTM=0.227 tol=2.35 2024-07-12 11:39:55,381 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=66.8 pTM=0.458 ipTM=0.225 tol=1.8 2024-07-12 11:40:03,116 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=66.7 pTM=0.461 ipTM=0.235 tol=1.28 2024-07-12 11:40:10,844 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=66.4 pTM=0.466 ipTM=0.243 tol=0.977 2024-07-12 11:40:18,578 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=66.7 pTM=0.467 ipTM=0.246 tol=2.65 2024-07-12 11:40:26,313 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=66.5 pTM=0.466 ipTM=0.239 tol=2.4 2024-07-12 11:40:34,040 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=66.4 pTM=0.465 ipTM=0.243 tol=2.93 2024-07-12 11:40:41,770 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=66.9 pTM=0.469 ipTM=0.253 tol=3.27 2024-07-12 11:40:49,488 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=66.6 pTM=0.467 ipTM=0.251 tol=3.84 2024-07-12 11:40:57,217 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.1 pTM=0.471 ipTM=0.255 tol=4.28 2024-07-12 11:41:04,936 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=66.8 pTM=0.466 ipTM=0.25 tol=2.27 2024-07-12 11:41:12,656 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=66.8 pTM=0.469 ipTM=0.256 tol=1.93 2024-07-12 11:41:20,381 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=66.8 pTM=0.469 ipTM=0.256 tol=3.35 2024-07-12 11:41:28,117 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=67.1 pTM=0.461 ipTM=0.233 tol=2.77 2024-07-12 11:41:35,852 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=66.9 pTM=0.473 ipTM=0.261 tol=5.54 2024-07-12 11:41:43,577 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=66.8 pTM=0.46 ipTM=0.223 tol=3.6 2024-07-12 11:41:51,306 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=66.9 pTM=0.473 ipTM=0.257 tol=4.47 2024-07-12 11:41:59,041 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=67.4 pTM=0.455 ipTM=0.212 tol=3.32 2024-07-12 11:42:06,771 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=66.8 pTM=0.459 ipTM=0.222 tol=2.54 2024-07-12 11:42:14,486 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=66.5 pTM=0.466 ipTM=0.242 tol=3.69 2024-07-12 11:42:22,208 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=66.9 pTM=0.46 ipTM=0.235 tol=2.98 2024-07-12 11:42:29,937 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=67.5 pTM=0.465 ipTM=0.246 tol=2.71 2024-07-12 11:42:37,664 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=67.1 pTM=0.466 ipTM=0.249 tol=3.21 2024-07-12 11:42:45,398 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67.4 pTM=0.469 ipTM=0.252 tol=1.79 2024-07-12 11:42:45,399 alphafold2_multimer_v3_model_5_seed_000 took 239.5s (30 recycles) 2024-07-12 11:42:45,643 reranking models by 'multimer' metric 2024-07-12 11:43:01,684 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-12 11:43:29,455 Relaxation took 43.8s 2024-07-12 11:43:29,456 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=70.5 pTM=0.524 ipTM=0.421 2024-07-12 11:43:55,252 Relaxation took 25.8s 2024-07-12 11:43:55,252 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=70.1 pTM=0.495 ipTM=0.312 2024-07-12 11:44:32,854 Relaxation took 37.6s 2024-07-12 11:44:32,854 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=66.7 pTM=0.452 ipTM=0.271 2024-07-12 11:45:10,883 Relaxation took 38.0s 2024-07-12 11:45:10,883 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67.4 pTM=0.469 ipTM=0.252 2024-07-12 11:45:50,795 Relaxation took 39.9s 2024-07-12 11:45:50,795 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=68.4 pTM=0.438 ipTM=0.235 2024-07-12 11:45:51,945 Done