2024-07-12 11:48:43,536 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-12 11:48:46,099 Running on GPU 2024-07-12 11:50:07,750 Found 6 citations for tools or databases 2024-07-12 11:50:07,750 Query 1/1: PSME3_VTM2B (length 539) 2024-07-12 11:50:09,037 Sleeping for 8s. Reason: PENDING 2024-07-12 11:50:17,459 Sleeping for 10s. Reason: RUNNING 2024-07-12 11:50:27,899 Sleeping for 9s. Reason: RUNNING 2024-07-12 11:50:37,317 Sleeping for 10s. Reason: RUNNING 2024-07-12 11:50:47,742 Sleeping for 5s. Reason: RUNNING 2024-07-12 11:50:54,615 Sleeping for 7s. Reason: PENDING 2024-07-12 11:51:02,031 Sleeping for 8s. Reason: RUNNING 2024-07-12 11:51:10,460 Sleeping for 10s. Reason: RUNNING 2024-07-12 11:51:22,260 Setting max_seq=508, max_extra_seq=2048 2024-07-12 11:55:04,326 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=57.9 pTM=0.423 ipTM=0.127 2024-07-12 11:55:10,407 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=56.7 pTM=0.407 ipTM=0.113 tol=17.9 2024-07-12 11:55:16,506 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=57.6 pTM=0.412 ipTM=0.104 tol=8.13 2024-07-12 11:55:22,610 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=58.2 pTM=0.423 ipTM=0.122 tol=15.6 2024-07-12 11:55:28,724 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=58.6 pTM=0.42 ipTM=0.109 tol=5.58 2024-07-12 11:55:34,843 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=58.8 pTM=0.424 ipTM=0.112 tol=4.61 2024-07-12 11:55:40,965 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=59.8 pTM=0.432 ipTM=0.125 tol=4.87 2024-07-12 11:55:47,089 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.6 pTM=0.43 ipTM=0.118 tol=5.83 2024-07-12 11:55:53,205 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=60.2 pTM=0.433 ipTM=0.126 tol=3.91 2024-07-12 11:55:59,327 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=59.9 pTM=0.43 ipTM=0.12 tol=5.16 2024-07-12 11:56:05,453 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60.4 pTM=0.437 ipTM=0.13 tol=1.86 2024-07-12 11:56:11,589 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=60.2 pTM=0.433 ipTM=0.126 tol=2.05 2024-07-12 11:56:17,727 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60.3 pTM=0.435 ipTM=0.127 tol=1.99 2024-07-12 11:56:23,860 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=60.1 pTM=0.432 ipTM=0.125 tol=6.4 2024-07-12 11:56:29,998 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.1 pTM=0.431 ipTM=0.132 tol=6.79 2024-07-12 11:56:36,136 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.3 pTM=0.436 ipTM=0.133 tol=7.04 2024-07-12 11:56:42,278 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60.5 pTM=0.437 ipTM=0.133 tol=3.13 2024-07-12 11:56:48,418 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60.2 pTM=0.434 ipTM=0.13 tol=3.82 2024-07-12 11:56:54,562 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=60.2 pTM=0.431 ipTM=0.131 tol=3.11 2024-07-12 11:57:00,705 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=60 pTM=0.432 ipTM=0.135 tol=5.48 2024-07-12 11:57:06,849 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=59.9 pTM=0.429 ipTM=0.131 tol=2.77 2024-07-12 11:57:12,990 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=59.9 pTM=0.433 ipTM=0.141 tol=5.99 2024-07-12 11:57:19,130 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.2 pTM=0.433 ipTM=0.128 tol=5.54 2024-07-12 11:57:25,278 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60.3 pTM=0.435 ipTM=0.136 tol=2.14 2024-07-12 11:57:31,423 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60.3 pTM=0.434 ipTM=0.129 tol=2.15 2024-07-12 11:57:37,560 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=59.9 pTM=0.433 ipTM=0.133 tol=3.57 2024-07-12 11:57:43,702 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.6 pTM=0.437 ipTM=0.135 tol=2.46 2024-07-12 11:57:49,838 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=60.6 pTM=0.437 ipTM=0.135 tol=2.01 2024-07-12 11:57:55,978 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=59.9 pTM=0.429 ipTM=0.128 tol=12.7 2024-07-12 11:58:02,118 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.3 pTM=0.432 ipTM=0.131 tol=6.87 2024-07-12 11:58:08,259 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=60.1 pTM=0.433 ipTM=0.13 tol=7.66 2024-07-12 11:58:08,259 alphafold2_multimer_v3_model_1_seed_000 took 346.8s (30 recycles) 2024-07-12 11:58:14,605 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=59.4 pTM=0.429 ipTM=0.164 2024-07-12 11:58:20,758 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=59.2 pTM=0.425 ipTM=0.117 tol=10.4 2024-07-12 11:58:26,908 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=59.8 pTM=0.433 ipTM=0.132 tol=8.32 2024-07-12 11:58:33,053 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=60 pTM=0.434 ipTM=0.133 tol=7.2 2024-07-12 11:58:39,204 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=60.1 pTM=0.428 ipTM=0.123 tol=5.74 2024-07-12 11:58:45,352 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=60 pTM=0.433 ipTM=0.132 tol=4.2 2024-07-12 11:58:51,503 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=60.4 pTM=0.434 ipTM=0.131 tol=5.63 2024-07-12 11:58:57,657 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=60.4 pTM=0.43 ipTM=0.13 tol=9.12 2024-07-12 11:59:03,812 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=60.5 pTM=0.428 ipTM=0.127 tol=2.92 2024-07-12 11:59:09,969 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=60.7 pTM=0.43 ipTM=0.131 tol=2.69 2024-07-12 11:59:16,129 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=60.9 pTM=0.435 ipTM=0.133 tol=1.66 2024-07-12 11:59:22,284 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=61.1 pTM=0.437 ipTM=0.135 tol=1.6 2024-07-12 11:59:28,441 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=60.8 pTM=0.434 ipTM=0.128 tol=1.16 2024-07-12 11:59:34,593 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=61.1 pTM=0.439 ipTM=0.136 tol=1.54 2024-07-12 11:59:40,747 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=60.5 pTM=0.431 ipTM=0.126 tol=1.76 2024-07-12 11:59:46,903 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=60.9 pTM=0.44 ipTM=0.139 tol=1.77 2024-07-12 11:59:53,062 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=60.8 pTM=0.434 ipTM=0.126 tol=1.87 2024-07-12 11:59:59,218 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=60.5 pTM=0.433 ipTM=0.132 tol=2.39 2024-07-12 12:00:05,377 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=60.6 pTM=0.429 ipTM=0.123 tol=2.14 2024-07-12 12:00:11,534 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=60.6 pTM=0.437 ipTM=0.137 tol=1.88 2024-07-12 12:00:17,694 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=60.9 pTM=0.434 ipTM=0.13 tol=1.44 2024-07-12 12:00:23,849 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=60.8 pTM=0.439 ipTM=0.137 tol=1.28 2024-07-12 12:00:30,001 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=60.8 pTM=0.435 ipTM=0.129 tol=1.49 2024-07-12 12:00:36,154 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=61 pTM=0.443 ipTM=0.141 tol=1.68 2024-07-12 12:00:42,306 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=61 pTM=0.437 ipTM=0.129 tol=2.11 2024-07-12 12:00:48,460 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=60.9 pTM=0.437 ipTM=0.134 tol=5.44 2024-07-12 12:00:54,617 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=60.7 pTM=0.433 ipTM=0.127 tol=2.65 2024-07-12 12:01:00,778 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=61 pTM=0.436 ipTM=0.135 tol=1.75 2024-07-12 12:01:06,936 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=60.4 pTM=0.431 ipTM=0.13 tol=1.63 2024-07-12 12:01:13,093 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=61.1 pTM=0.436 ipTM=0.14 tol=2.01 2024-07-12 12:01:19,255 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=61.1 pTM=0.437 ipTM=0.138 tol=1.5 2024-07-12 12:01:19,255 alphafold2_multimer_v3_model_2_seed_000 took 190.8s (30 recycles) 2024-07-12 12:01:25,659 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=58.7 pTM=0.422 ipTM=0.114 2024-07-12 12:01:31,839 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=58.9 pTM=0.439 ipTM=0.122 tol=13.3 2024-07-12 12:01:38,024 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=58.9 pTM=0.433 ipTM=0.111 tol=4.74 2024-07-12 12:01:44,217 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=59.1 pTM=0.434 ipTM=0.111 tol=3.3 2024-07-12 12:01:50,406 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59.2 pTM=0.433 ipTM=0.11 tol=3.56 2024-07-12 12:01:56,586 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=59.1 pTM=0.434 ipTM=0.113 tol=2.4 2024-07-12 12:02:02,775 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=59.8 pTM=0.441 ipTM=0.127 tol=4.41 2024-07-12 12:02:08,957 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=59.1 pTM=0.439 ipTM=0.126 tol=4.85 2024-07-12 12:02:15,138 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=59.5 pTM=0.434 ipTM=0.116 tol=3.98 2024-07-12 12:02:21,320 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=59.3 pTM=0.438 ipTM=0.136 tol=4.74 2024-07-12 12:02:27,504 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=59.8 pTM=0.433 ipTM=0.112 tol=4.21 2024-07-12 12:02:33,683 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=59.5 pTM=0.444 ipTM=0.138 tol=4.75 2024-07-12 12:02:39,861 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=59.4 pTM=0.437 ipTM=0.122 tol=3.63 2024-07-12 12:02:46,036 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=59.5 pTM=0.445 ipTM=0.142 tol=3.59 2024-07-12 12:02:52,214 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=59.8 pTM=0.434 ipTM=0.117 tol=3.24 2024-07-12 12:02:58,400 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=59.8 pTM=0.442 ipTM=0.129 tol=2.26 2024-07-12 12:03:04,585 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=60.3 pTM=0.437 ipTM=0.116 tol=3.2 2024-07-12 12:03:10,769 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=60.1 pTM=0.435 ipTM=0.112 tol=2.49 2024-07-12 12:03:16,964 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=60.2 pTM=0.433 ipTM=0.108 tol=1.68 2024-07-12 12:03:23,154 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=59.9 pTM=0.441 ipTM=0.123 tol=3.05 2024-07-12 12:03:29,341 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=60.4 pTM=0.437 ipTM=0.115 tol=3.56 2024-07-12 12:03:35,526 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=60.3 pTM=0.442 ipTM=0.121 tol=2.45 2024-07-12 12:03:41,711 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=60.5 pTM=0.439 ipTM=0.117 tol=2.21 2024-07-12 12:03:47,900 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=60.4 pTM=0.446 ipTM=0.129 tol=2.25 2024-07-12 12:03:54,081 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=60.5 pTM=0.441 ipTM=0.12 tol=2.21 2024-07-12 12:04:00,271 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=60.4 pTM=0.441 ipTM=0.118 tol=1.94 2024-07-12 12:04:06,456 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=60.4 pTM=0.444 ipTM=0.125 tol=1.52 2024-07-12 12:04:12,640 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=60.5 pTM=0.437 ipTM=0.116 tol=1.74 2024-07-12 12:04:18,827 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=59.9 pTM=0.437 ipTM=0.113 tol=2.35 2024-07-12 12:04:25,016 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=60.3 pTM=0.44 ipTM=0.117 tol=2.13 2024-07-12 12:04:31,211 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.1 pTM=0.438 ipTM=0.117 tol=2.13 2024-07-12 12:04:31,212 alphafold2_multimer_v3_model_3_seed_000 took 191.8s (30 recycles) 2024-07-12 12:04:37,588 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=58.7 pTM=0.437 ipTM=0.133 2024-07-12 12:04:43,765 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=59.1 pTM=0.425 ipTM=0.11 tol=8.44 2024-07-12 12:04:49,941 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=59.1 pTM=0.426 ipTM=0.131 tol=9.55 2024-07-12 12:04:56,133 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=59.5 pTM=0.422 ipTM=0.105 tol=8.59 2024-07-12 12:05:02,320 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=60.3 pTM=0.423 ipTM=0.107 tol=4.01 2024-07-12 12:05:08,509 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=60.4 pTM=0.427 ipTM=0.108 tol=2.88 2024-07-12 12:05:14,703 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=61.2 pTM=0.427 ipTM=0.104 tol=4.92 2024-07-12 12:05:20,887 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=60.3 pTM=0.429 ipTM=0.112 tol=7.57 2024-07-12 12:05:27,077 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=60.7 pTM=0.426 ipTM=0.111 tol=3.51 2024-07-12 12:05:33,269 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=60.8 pTM=0.428 ipTM=0.114 tol=1.88 2024-07-12 12:05:39,458 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=60.8 pTM=0.428 ipTM=0.11 tol=2.11 2024-07-12 12:05:45,646 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=60.8 pTM=0.431 ipTM=0.117 tol=3.13 2024-07-12 12:05:51,836 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=60.7 pTM=0.428 ipTM=0.108 tol=3.07 2024-07-12 12:05:58,026 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=60.9 pTM=0.431 ipTM=0.113 tol=4.88 2024-07-12 12:06:04,216 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=60.6 pTM=0.427 ipTM=0.112 tol=4.43 2024-07-12 12:06:10,392 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=60.8 pTM=0.43 ipTM=0.116 tol=2.59 2024-07-12 12:06:16,588 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=60.8 pTM=0.428 ipTM=0.111 tol=2.14 2024-07-12 12:06:22,770 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=60.5 pTM=0.427 ipTM=0.113 tol=3.46 2024-07-12 12:06:28,960 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=60.6 pTM=0.425 ipTM=0.106 tol=2.12 2024-07-12 12:06:35,156 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=60.8 pTM=0.426 ipTM=0.111 tol=2.29 2024-07-12 12:06:41,354 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=60.9 pTM=0.427 ipTM=0.106 tol=8.45 2024-07-12 12:06:47,541 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=60.4 pTM=0.427 ipTM=0.107 tol=6.06 2024-07-12 12:06:53,726 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=60.8 pTM=0.427 ipTM=0.109 tol=4.37 2024-07-12 12:06:59,919 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=60.5 pTM=0.435 ipTM=0.119 tol=10 2024-07-12 12:07:06,104 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=60.8 pTM=0.43 ipTM=0.117 tol=5.2 2024-07-12 12:07:12,292 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60.7 pTM=0.432 ipTM=0.127 tol=4.88 2024-07-12 12:07:18,479 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=60.7 pTM=0.43 ipTM=0.12 tol=3.54 2024-07-12 12:07:24,671 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=60.7 pTM=0.427 ipTM=0.116 tol=2.16 2024-07-12 12:07:30,858 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=60.6 pTM=0.43 ipTM=0.119 tol=4.17 2024-07-12 12:07:37,049 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=60.8 pTM=0.428 ipTM=0.11 tol=4.54 2024-07-12 12:07:43,243 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=61.1 pTM=0.428 ipTM=0.107 tol=5.04 2024-07-12 12:07:43,243 alphafold2_multimer_v3_model_4_seed_000 took 191.8s (30 recycles) 2024-07-12 12:07:49,625 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=58.6 pTM=0.428 ipTM=0.118 2024-07-12 12:07:55,797 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=57.8 pTM=0.424 ipTM=0.111 tol=13.4 2024-07-12 12:08:01,971 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=58.3 pTM=0.43 ipTM=0.119 tol=4.7 2024-07-12 12:08:08,148 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=58.9 pTM=0.425 ipTM=0.103 tol=6.84 2024-07-12 12:08:14,328 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=59.2 pTM=0.43 ipTM=0.11 tol=7.47 2024-07-12 12:08:20,503 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=59.4 pTM=0.43 ipTM=0.113 tol=4.53 2024-07-12 12:08:26,685 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=59.6 pTM=0.434 ipTM=0.116 tol=4.86 2024-07-12 12:08:32,862 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=59.3 pTM=0.429 ipTM=0.11 tol=5.52 2024-07-12 12:08:39,043 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=59.4 pTM=0.429 ipTM=0.111 tol=7.06 2024-07-12 12:08:45,222 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=59.6 pTM=0.43 ipTM=0.113 tol=3 2024-07-12 12:08:51,401 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=59.5 pTM=0.432 ipTM=0.113 tol=3.74 2024-07-12 12:08:57,577 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=59.4 pTM=0.426 ipTM=0.108 tol=8.72 2024-07-12 12:09:03,755 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=59.4 pTM=0.434 ipTM=0.118 tol=8.35 2024-07-12 12:09:09,936 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=59.8 pTM=0.427 ipTM=0.101 tol=4.25 2024-07-12 12:09:16,111 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=59.8 pTM=0.43 ipTM=0.109 tol=2.08 2024-07-12 12:09:22,291 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=60.1 pTM=0.432 ipTM=0.108 tol=9.12 2024-07-12 12:09:28,476 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=59.8 pTM=0.429 ipTM=0.105 tol=8.94 2024-07-12 12:09:34,658 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=59.8 pTM=0.428 ipTM=0.108 tol=2.25 2024-07-12 12:09:40,842 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=59.6 pTM=0.424 ipTM=0.101 tol=4.01 2024-07-12 12:09:47,021 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=59.2 pTM=0.429 ipTM=0.111 tol=3.96 2024-07-12 12:09:53,201 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=59.9 pTM=0.427 ipTM=0.105 tol=3.84 2024-07-12 12:09:59,380 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=59.6 pTM=0.433 ipTM=0.114 tol=8.23 2024-07-12 12:10:05,561 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=59.9 pTM=0.426 ipTM=0.104 tol=6.33 2024-07-12 12:10:11,743 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=59.9 pTM=0.431 ipTM=0.11 tol=3.53 2024-07-12 12:10:17,928 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=59.8 pTM=0.43 ipTM=0.112 tol=5.59 2024-07-12 12:10:24,108 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=59.7 pTM=0.432 ipTM=0.116 tol=3.7 2024-07-12 12:10:30,288 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=59.9 pTM=0.429 ipTM=0.108 tol=3.42 2024-07-12 12:10:36,468 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=59.8 pTM=0.426 ipTM=0.104 tol=2.32 2024-07-12 12:10:42,644 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=59.3 pTM=0.428 ipTM=0.111 tol=4.73 2024-07-12 12:10:48,827 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=59.6 pTM=0.427 ipTM=0.107 tol=3.02 2024-07-12 12:10:55,010 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=60 pTM=0.434 ipTM=0.117 tol=2.58 2024-07-12 12:10:55,011 alphafold2_multimer_v3_model_5_seed_000 took 191.6s (30 recycles) 2024-07-12 12:10:55,208 reranking models by 'multimer' metric 2024-07-12 12:11:15,119 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-12 12:11:56,123 Relaxation took 60.9s 2024-07-12 12:11:56,123 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=61.1 pTM=0.437 ipTM=0.138 2024-07-12 12:12:28,806 Relaxation took 32.7s 2024-07-12 12:12:28,806 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=60.1 pTM=0.433 ipTM=0.13 2024-07-12 12:13:00,434 Relaxation took 31.6s 2024-07-12 12:13:00,435 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.1 pTM=0.438 ipTM=0.117 2024-07-12 12:13:34,364 Relaxation took 33.9s 2024-07-12 12:13:34,364 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=60 pTM=0.434 ipTM=0.117 2024-07-12 12:14:02,162 Relaxation took 27.8s 2024-07-12 12:14:02,163 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=61.1 pTM=0.428 ipTM=0.107 2024-07-12 12:14:03,189 Done