2024-07-12 12:15:38,617 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-12 12:15:38,932 Running on GPU 2024-07-12 12:15:50,337 Found 6 citations for tools or databases 2024-07-12 12:15:50,337 Query 1/1: PTSS2_PRR15 (length 616) 2024-07-12 12:15:50,790 Sleeping for 5s. Reason: PENDING 2024-07-12 12:15:56,224 Sleeping for 8s. Reason: RUNNING 2024-07-12 12:16:04,664 Sleeping for 9s. Reason: RUNNING 2024-07-12 12:16:14,107 Sleeping for 10s. Reason: RUNNING 2024-07-12 12:16:24,543 Sleeping for 7s. Reason: RUNNING 2024-07-12 12:16:31,964 Sleeping for 5s. Reason: RUNNING 2024-07-12 12:16:37,425 Sleeping for 6s. Reason: RUNNING 2024-07-12 12:16:43,853 Sleeping for 6s. Reason: RUNNING 2024-07-12 12:16:50,269 Sleeping for 8s. Reason: RUNNING 2024-07-12 12:16:58,696 Sleeping for 7s. Reason: RUNNING 2024-07-12 12:17:07,589 Sleeping for 9s. Reason: PENDING 2024-07-12 12:17:17,019 Sleeping for 6s. Reason: RUNNING 2024-07-12 12:17:23,438 Sleeping for 9s. Reason: RUNNING 2024-07-12 12:17:32,881 Sleeping for 5s. Reason: RUNNING 2024-07-12 12:17:39,629 Setting max_seq=508, max_extra_seq=2048 2024-07-12 12:20:29,992 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=61.7 pTM=0.594 ipTM=0.204 2024-07-12 12:20:37,384 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=63.5 pTM=0.604 ipTM=0.162 tol=8.89 2024-07-12 12:20:44,774 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=65.1 pTM=0.62 ipTM=0.153 tol=5.12 2024-07-12 12:20:52,153 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=64.1 pTM=0.609 ipTM=0.153 tol=4.8 2024-07-12 12:20:59,548 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=64.1 pTM=0.612 ipTM=0.152 tol=2.2 2024-07-12 12:21:06,943 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=64.1 pTM=0.609 ipTM=0.149 tol=1.81 2024-07-12 12:21:14,334 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=63.8 pTM=0.607 ipTM=0.153 tol=2.36 2024-07-12 12:21:21,742 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64.4 pTM=0.612 ipTM=0.16 tol=3.99 2024-07-12 12:21:29,147 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64.1 pTM=0.61 ipTM=0.159 tol=2.99 2024-07-12 12:21:36,558 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.4 pTM=0.614 ipTM=0.156 tol=2.16 2024-07-12 12:21:43,962 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64 pTM=0.606 ipTM=0.156 tol=2.09 2024-07-12 12:21:51,375 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=64.2 pTM=0.61 ipTM=0.161 tol=3.41 2024-07-12 12:21:58,789 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.2 pTM=0.611 ipTM=0.152 tol=1.97 2024-07-12 12:22:06,209 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64.5 pTM=0.616 ipTM=0.161 tol=2.28 2024-07-12 12:22:13,626 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=64.1 pTM=0.609 ipTM=0.153 tol=2.23 2024-07-12 12:22:21,043 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=63.7 pTM=0.607 ipTM=0.156 tol=2.15 2024-07-12 12:22:28,464 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.3 pTM=0.613 ipTM=0.154 tol=2.26 2024-07-12 12:22:35,886 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.2 pTM=0.611 ipTM=0.155 tol=2.64 2024-07-12 12:22:43,316 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.1 pTM=0.609 ipTM=0.155 tol=2.46 2024-07-12 12:22:50,746 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=63.9 pTM=0.608 ipTM=0.156 tol=4.12 2024-07-12 12:22:58,172 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=63.9 pTM=0.607 ipTM=0.157 tol=2.5 2024-07-12 12:23:05,602 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64.2 pTM=0.611 ipTM=0.166 tol=2.7 2024-07-12 12:23:13,038 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.2 pTM=0.613 ipTM=0.157 tol=3.52 2024-07-12 12:23:20,466 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=64.3 pTM=0.614 ipTM=0.162 tol=3.16 2024-07-12 12:23:27,900 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=64 pTM=0.611 ipTM=0.162 tol=2.29 2024-07-12 12:23:35,334 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64 pTM=0.611 ipTM=0.161 tol=2.44 2024-07-12 12:23:42,763 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=63.9 pTM=0.609 ipTM=0.161 tol=2.62 2024-07-12 12:23:50,196 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=63.8 pTM=0.607 ipTM=0.155 tol=2.82 2024-07-12 12:23:57,627 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=64.1 pTM=0.61 ipTM=0.163 tol=2.49 2024-07-12 12:24:05,055 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=63.8 pTM=0.607 ipTM=0.158 tol=2.42 2024-07-12 12:24:12,481 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=63.9 pTM=0.611 ipTM=0.17 tol=2.08 2024-07-12 12:24:12,482 alphafold2_multimer_v3_model_1_seed_000 took 339.1s (30 recycles) 2024-07-12 12:24:20,187 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=61.8 pTM=0.601 ipTM=0.283 2024-07-12 12:24:27,645 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=65.3 pTM=0.63 ipTM=0.171 tol=6.17 2024-07-12 12:24:35,093 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=63.8 pTM=0.613 ipTM=0.166 tol=6.77 2024-07-12 12:24:42,538 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=64.3 pTM=0.619 ipTM=0.18 tol=3.05 2024-07-12 12:24:49,986 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=64.1 pTM=0.618 ipTM=0.175 tol=1.61 2024-07-12 12:24:57,438 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=64.1 pTM=0.616 ipTM=0.174 tol=1.57 2024-07-12 12:25:04,884 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=64.2 pTM=0.617 ipTM=0.175 tol=1.16 2024-07-12 12:25:12,370 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=64.5 pTM=0.619 ipTM=0.177 tol=0.933 2024-07-12 12:25:19,832 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=64.5 pTM=0.62 ipTM=0.177 tol=0.775 2024-07-12 12:25:27,288 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=64.5 pTM=0.622 ipTM=0.183 tol=0.768 2024-07-12 12:25:34,740 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=64.3 pTM=0.618 ipTM=0.182 tol=0.938 2024-07-12 12:25:42,187 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=64.4 pTM=0.619 ipTM=0.181 tol=0.993 2024-07-12 12:25:49,639 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=64.4 pTM=0.622 ipTM=0.177 tol=1.14 2024-07-12 12:25:57,099 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=64.8 pTM=0.625 ipTM=0.177 tol=1.24 2024-07-12 12:26:04,552 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=64.4 pTM=0.619 ipTM=0.18 tol=1.25 2024-07-12 12:26:11,993 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=64.2 pTM=0.619 ipTM=0.183 tol=0.657 2024-07-12 12:26:19,440 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=64.4 pTM=0.621 ipTM=0.185 tol=0.643 2024-07-12 12:26:26,889 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=64.5 pTM=0.621 ipTM=0.187 tol=1 2024-07-12 12:26:34,339 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64.4 pTM=0.619 ipTM=0.174 tol=1.58 2024-07-12 12:26:41,782 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=64.2 pTM=0.618 ipTM=0.173 tol=1.44 2024-07-12 12:26:49,226 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64.2 pTM=0.617 ipTM=0.186 tol=1.16 2024-07-12 12:26:56,676 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=64.6 pTM=0.622 ipTM=0.192 tol=1.86 2024-07-12 12:27:04,131 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=64.6 pTM=0.622 ipTM=0.182 tol=1.49 2024-07-12 12:27:11,577 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=64.5 pTM=0.622 ipTM=0.178 tol=1.29 2024-07-12 12:27:19,027 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=64.5 pTM=0.621 ipTM=0.178 tol=0.814 2024-07-12 12:27:26,509 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=64.6 pTM=0.621 ipTM=0.188 tol=1.05 2024-07-12 12:27:33,961 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=64.1 pTM=0.618 ipTM=0.182 tol=1.87 2024-07-12 12:27:41,416 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=64.2 pTM=0.618 ipTM=0.175 tol=1.37 2024-07-12 12:27:48,862 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=64.3 pTM=0.617 ipTM=0.174 tol=1.06 2024-07-12 12:27:56,309 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=64.5 pTM=0.621 ipTM=0.188 tol=1.16 2024-07-12 12:28:03,753 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=64.2 pTM=0.618 ipTM=0.187 tol=1.2 2024-07-12 12:28:03,753 alphafold2_multimer_v3_model_2_seed_000 took 231.0s (30 recycles) 2024-07-12 12:28:11,447 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=61.9 pTM=0.588 ipTM=0.128 2024-07-12 12:28:18,905 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=63.4 pTM=0.604 ipTM=0.139 tol=7.39 2024-07-12 12:28:26,350 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=63.1 pTM=0.601 ipTM=0.133 tol=3.78 2024-07-12 12:28:33,803 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=62.9 pTM=0.601 ipTM=0.134 tol=1.52 2024-07-12 12:28:41,252 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=62.9 pTM=0.601 ipTM=0.134 tol=1.75 2024-07-12 12:28:48,712 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=63.2 pTM=0.605 ipTM=0.137 tol=1.46 2024-07-12 12:28:56,157 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=62.9 pTM=0.601 ipTM=0.132 tol=1.49 2024-07-12 12:29:03,612 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=63.1 pTM=0.602 ipTM=0.133 tol=1.58 2024-07-12 12:29:11,067 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=63 pTM=0.602 ipTM=0.137 tol=1.3 2024-07-12 12:29:18,523 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=63.3 pTM=0.604 ipTM=0.137 tol=1.16 2024-07-12 12:29:25,972 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=63.1 pTM=0.601 ipTM=0.136 tol=1.25 2024-07-12 12:29:33,425 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=63 pTM=0.602 ipTM=0.138 tol=0.904 2024-07-12 12:29:40,880 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=63.1 pTM=0.603 ipTM=0.136 tol=0.916 2024-07-12 12:29:48,329 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=63.2 pTM=0.604 ipTM=0.135 tol=0.911 2024-07-12 12:29:55,786 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=63.1 pTM=0.602 ipTM=0.139 tol=0.746 2024-07-12 12:30:03,234 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=62.9 pTM=0.601 ipTM=0.139 tol=1.06 2024-07-12 12:30:10,686 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=63.1 pTM=0.604 ipTM=0.142 tol=1.09 2024-07-12 12:30:18,134 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=62.9 pTM=0.602 ipTM=0.137 tol=1.16 2024-07-12 12:30:25,592 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=63.1 pTM=0.602 ipTM=0.141 tol=0.743 2024-07-12 12:30:33,047 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=62.9 pTM=0.602 ipTM=0.135 tol=1.07 2024-07-12 12:30:40,496 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=62.9 pTM=0.602 ipTM=0.139 tol=3.38 2024-07-12 12:30:47,942 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=62.9 pTM=0.601 ipTM=0.135 tol=3.25 2024-07-12 12:30:55,394 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=63.2 pTM=0.605 ipTM=0.138 tol=1.34 2024-07-12 12:31:02,841 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=63 pTM=0.602 ipTM=0.135 tol=0.929 2024-07-12 12:31:10,290 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=62.9 pTM=0.601 ipTM=0.139 tol=0.824 2024-07-12 12:31:17,744 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=63.1 pTM=0.603 ipTM=0.139 tol=0.878 2024-07-12 12:31:25,200 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=63.2 pTM=0.603 ipTM=0.138 tol=1.54 2024-07-12 12:31:32,649 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=62.8 pTM=0.601 ipTM=0.136 tol=1.04 2024-07-12 12:31:40,095 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=62.8 pTM=0.6 ipTM=0.135 tol=1.35 2024-07-12 12:31:47,568 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=63 pTM=0.603 ipTM=0.137 tol=1.36 2024-07-12 12:31:55,035 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=63.1 pTM=0.603 ipTM=0.136 tol=0.844 2024-07-12 12:31:55,036 alphafold2_multimer_v3_model_3_seed_000 took 231.0s (30 recycles) 2024-07-12 12:32:02,771 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=61.1 pTM=0.585 ipTM=0.146 2024-07-12 12:32:10,239 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=63.6 pTM=0.605 ipTM=0.149 tol=7.5 2024-07-12 12:32:17,710 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=64.7 pTM=0.614 ipTM=0.152 tol=3.36 2024-07-12 12:32:25,188 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=63.8 pTM=0.604 ipTM=0.164 tol=2.77 2024-07-12 12:32:32,660 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=63.7 pTM=0.605 ipTM=0.162 tol=1.47 2024-07-12 12:32:40,140 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=64.1 pTM=0.606 ipTM=0.162 tol=1.53 2024-07-12 12:32:47,615 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=63.9 pTM=0.604 ipTM=0.161 tol=2.58 2024-07-12 12:32:55,102 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=63.8 pTM=0.603 ipTM=0.168 tol=2.83 2024-07-12 12:33:02,577 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=63.6 pTM=0.602 ipTM=0.168 tol=3.02 2024-07-12 12:33:10,056 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=63.8 pTM=0.605 ipTM=0.163 tol=3.56 2024-07-12 12:33:17,544 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=63.6 pTM=0.601 ipTM=0.167 tol=3.55 2024-07-12 12:33:25,020 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=63.6 pTM=0.601 ipTM=0.167 tol=5.05 2024-07-12 12:33:32,499 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=63.5 pTM=0.6 ipTM=0.168 tol=5.07 2024-07-12 12:33:39,978 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=63.8 pTM=0.604 ipTM=0.165 tol=3.06 2024-07-12 12:33:47,462 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64 pTM=0.605 ipTM=0.176 tol=2.22 2024-07-12 12:33:54,929 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=63.6 pTM=0.602 ipTM=0.162 tol=3.12 2024-07-12 12:34:02,406 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=63.7 pTM=0.602 ipTM=0.175 tol=2 2024-07-12 12:34:09,878 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63.3 pTM=0.599 ipTM=0.165 tol=1.84 2024-07-12 12:34:17,371 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=63.5 pTM=0.602 ipTM=0.165 tol=2.94 2024-07-12 12:34:24,844 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=63.4 pTM=0.601 ipTM=0.161 tol=3.77 2024-07-12 12:34:32,310 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=63.4 pTM=0.601 ipTM=0.164 tol=1.84 2024-07-12 12:34:39,778 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=63.8 pTM=0.604 ipTM=0.167 tol=1.04 2024-07-12 12:34:47,235 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=63.4 pTM=0.599 ipTM=0.16 tol=1.81 2024-07-12 12:34:54,692 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=63.4 pTM=0.602 ipTM=0.161 tol=1.77 2024-07-12 12:35:02,169 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=63.8 pTM=0.604 ipTM=0.169 tol=1.33 2024-07-12 12:35:09,643 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64 pTM=0.607 ipTM=0.167 tol=1.2 2024-07-12 12:35:17,113 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=63.6 pTM=0.604 ipTM=0.173 tol=1.65 2024-07-12 12:35:24,584 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=63.5 pTM=0.602 ipTM=0.164 tol=1.54 2024-07-12 12:35:32,058 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=63.5 pTM=0.603 ipTM=0.165 tol=1.41 2024-07-12 12:35:39,522 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=63.7 pTM=0.606 ipTM=0.168 tol=2.58 2024-07-12 12:35:46,984 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=63.5 pTM=0.601 ipTM=0.166 tol=2.64 2024-07-12 12:35:46,985 alphafold2_multimer_v3_model_4_seed_000 took 231.7s (30 recycles) 2024-07-12 12:35:54,653 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=58.8 pTM=0.572 ipTM=0.139 2024-07-12 12:36:02,102 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=61.6 pTM=0.597 ipTM=0.14 tol=6.7 2024-07-12 12:36:09,541 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=62.3 pTM=0.605 ipTM=0.137 tol=5.11 2024-07-12 12:36:16,994 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61.5 pTM=0.597 ipTM=0.138 tol=3.22 2024-07-12 12:36:24,443 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.8 pTM=0.601 ipTM=0.141 tol=2.68 2024-07-12 12:36:31,904 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=62 pTM=0.599 ipTM=0.132 tol=1.72 2024-07-12 12:36:39,354 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=62.1 pTM=0.603 ipTM=0.146 tol=2.94 2024-07-12 12:36:46,801 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=62 pTM=0.599 ipTM=0.134 tol=2.78 2024-07-12 12:36:54,248 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=62.1 pTM=0.602 ipTM=0.143 tol=1.66 2024-07-12 12:37:01,692 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=62.2 pTM=0.601 ipTM=0.135 tol=3.06 2024-07-12 12:37:09,140 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=62.1 pTM=0.6 ipTM=0.148 tol=3.05 2024-07-12 12:37:16,584 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=62.3 pTM=0.602 ipTM=0.138 tol=3.6 2024-07-12 12:37:24,029 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=62.1 pTM=0.601 ipTM=0.136 tol=2.07 2024-07-12 12:37:31,480 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=62.5 pTM=0.606 ipTM=0.139 tol=2.11 2024-07-12 12:37:38,928 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=62.3 pTM=0.602 ipTM=0.133 tol=2.89 2024-07-12 12:37:46,370 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=62 pTM=0.601 ipTM=0.145 tol=2.71 2024-07-12 12:37:53,816 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=62.2 pTM=0.601 ipTM=0.142 tol=1.65 2024-07-12 12:38:01,271 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=62.2 pTM=0.602 ipTM=0.144 tol=1.62 2024-07-12 12:38:08,724 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=62.4 pTM=0.603 ipTM=0.138 tol=2.65 2024-07-12 12:38:16,169 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=62.3 pTM=0.604 ipTM=0.14 tol=3.15 2024-07-12 12:38:23,618 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=62.2 pTM=0.603 ipTM=0.136 tol=3.95 2024-07-12 12:38:31,063 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=62.3 pTM=0.603 ipTM=0.144 tol=3.85 2024-07-12 12:38:38,514 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=62.3 pTM=0.603 ipTM=0.136 tol=2.61 2024-07-12 12:38:45,960 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=62.5 pTM=0.605 ipTM=0.136 tol=3.62 2024-07-12 12:38:53,412 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=62.4 pTM=0.604 ipTM=0.135 tol=2.28 2024-07-12 12:39:00,864 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=62.7 pTM=0.607 ipTM=0.142 tol=2.65 2024-07-12 12:39:08,322 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=62.4 pTM=0.603 ipTM=0.13 tol=1.36 2024-07-12 12:39:15,771 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=62.2 pTM=0.601 ipTM=0.138 tol=1.07 2024-07-12 12:39:23,215 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=62.2 pTM=0.603 ipTM=0.135 tol=2.76 2024-07-12 12:39:30,661 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=62.3 pTM=0.605 ipTM=0.14 tol=2.54 2024-07-12 12:39:38,105 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=62.2 pTM=0.603 ipTM=0.137 tol=2.84 2024-07-12 12:39:38,106 alphafold2_multimer_v3_model_5_seed_000 took 230.9s (30 recycles) 2024-07-12 12:39:38,357 reranking models by 'multimer' metric 2024-07-12 12:39:39,260 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-12 12:40:16,855 Relaxation took 38.5s 2024-07-12 12:40:16,855 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=64.2 pTM=0.618 ipTM=0.187 2024-07-12 12:40:49,278 Relaxation took 32.4s 2024-07-12 12:40:49,278 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=63.9 pTM=0.611 ipTM=0.17 2024-07-12 12:41:13,405 Relaxation took 24.1s 2024-07-12 12:41:13,405 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=63.5 pTM=0.601 ipTM=0.166 2024-07-12 12:41:45,367 Relaxation took 32.0s 2024-07-12 12:41:45,368 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=62.2 pTM=0.603 ipTM=0.137 2024-07-12 12:42:08,386 Relaxation took 23.0s 2024-07-12 12:42:08,386 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=63.1 pTM=0.603 ipTM=0.136 2024-07-12 12:42:09,554 Done