2024-07-12 12:30:52,516 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 12:30:55,890 Running on GPU
2024-07-12 12:31:11,319 Found 6 citations for tools or databases
2024-07-12 12:31:11,319 Query 1/1: PYRD1_DIM1 (length 813)
2024-07-12 12:31:11,818 Sleeping for 6s. Reason: PENDING
2024-07-12 12:31:18,283 Sleeping for 6s. Reason: RUNNING
2024-07-12 12:31:24,713 Sleeping for 9s. Reason: RUNNING
2024-07-12 12:31:34,149 Sleeping for 10s. Reason: RUNNING
2024-07-12 12:31:44,588 Sleeping for 6s. Reason: RUNNING
2024-07-12 12:31:51,009 Sleeping for 8s. Reason: RUNNING
2024-07-12 12:31:59,452 Sleeping for 10s. Reason: RUNNING
2024-07-12 12:32:09,905 Sleeping for 9s. Reason: RUNNING
2024-07-12 12:32:19,349 Sleeping for 5s. Reason: RUNNING
2024-07-12 12:32:24,789 Sleeping for 5s. Reason: RUNNING
2024-07-12 12:32:30,202 Sleeping for 7s. Reason: RUNNING
2024-07-12 12:32:37,631 Sleeping for 10s. Reason: RUNNING
2024-07-12 12:32:48,077 Sleeping for 10s. Reason: RUNNING
2024-07-12 12:32:58,492 Sleeping for 6s. Reason: RUNNING
2024-07-12 12:33:04,919 Sleeping for 6s. Reason: RUNNING
2024-07-12 12:33:11,341 Sleeping for 10s. Reason: RUNNING
2024-07-12 12:33:21,768 Sleeping for 6s. Reason: RUNNING
2024-07-12 12:33:28,180 Sleeping for 10s. Reason: RUNNING
2024-07-12 12:33:38,603 Sleeping for 10s. Reason: RUNNING
2024-07-12 12:33:49,021 Sleeping for 7s. Reason: RUNNING
2024-07-12 12:33:56,434 Sleeping for 5s. Reason: RUNNING
2024-07-12 12:34:01,868 Sleeping for 6s. Reason: RUNNING
2024-07-12 12:34:08,310 Sleeping for 5s. Reason: RUNNING
2024-07-12 12:34:13,742 Sleeping for 9s. Reason: RUNNING
2024-07-12 12:34:23,202 Sleeping for 5s. Reason: RUNNING
2024-07-12 12:34:28,616 Sleeping for 10s. Reason: RUNNING
2024-07-12 12:34:39,062 Sleeping for 9s. Reason: RUNNING
2024-07-12 12:34:48,479 Sleeping for 5s. Reason: RUNNING
2024-07-12 12:34:53,904 Sleeping for 8s. Reason: RUNNING
2024-07-12 12:35:02,354 Sleeping for 10s. Reason: RUNNING
2024-07-12 12:35:12,826 Sleeping for 5s. Reason: RUNNING
2024-07-12 12:35:18,269 Sleeping for 10s. Reason: RUNNING
2024-07-12 12:35:28,707 Sleeping for 6s. Reason: RUNNING
2024-07-12 12:35:35,120 Sleeping for 8s. Reason: RUNNING
2024-07-12 12:35:43,542 Sleeping for 5s. Reason: RUNNING
2024-07-12 12:35:50,801 Sleeping for 10s. Reason: PENDING
2024-07-12 12:36:01,227 Sleeping for 10s. Reason: RUNNING
2024-07-12 12:36:11,655 Sleeping for 10s. Reason: RUNNING
2024-07-12 12:36:22,128 Sleeping for 10s. Reason: RUNNING
2024-07-12 12:36:32,571 Sleeping for 10s. Reason: RUNNING
2024-07-12 12:36:42,994 Sleeping for 5s. Reason: RUNNING
2024-07-12 12:36:48,411 Sleeping for 5s. Reason: RUNNING
2024-07-12 12:36:53,848 Sleeping for 8s. Reason: RUNNING
2024-07-12 12:37:02,288 Sleeping for 6s. Reason: RUNNING
2024-07-12 12:37:08,718 Sleeping for 5s. Reason: RUNNING
2024-07-12 12:37:14,178 Sleeping for 10s. Reason: RUNNING
2024-07-12 12:37:24,616 Sleeping for 10s. Reason: RUNNING
2024-07-12 12:37:35,062 Sleeping for 8s. Reason: RUNNING
2024-07-12 12:37:43,469 Sleeping for 7s. Reason: RUNNING
2024-07-12 12:37:50,941 Sleeping for 8s. Reason: RUNNING
2024-07-12 12:37:59,381 Sleeping for 10s. Reason: RUNNING
2024-07-12 12:38:09,806 Sleeping for 5s. Reason: RUNNING
2024-07-12 12:38:15,218 Sleeping for 6s. Reason: RUNNING
2024-07-12 12:38:21,682 Sleeping for 6s. Reason: RUNNING
2024-07-12 12:38:28,108 Sleeping for 10s. Reason: RUNNING
2024-07-12 12:38:42,872 Setting max_seq=508, max_extra_seq=2048
2024-07-12 12:43:09,129 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=81.6 pTM=0.614 ipTM=0.228
2024-07-12 12:43:26,041 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=81.7 pTM=0.639 ipTM=0.298 tol=4.27
2024-07-12 12:43:42,963 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=82 pTM=0.602 ipTM=0.21 tol=3.82
2024-07-12 12:43:59,910 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=82.3 pTM=0.6 ipTM=0.205 tol=1.49
2024-07-12 12:44:16,895 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=83.2 pTM=0.611 ipTM=0.231 tol=1.37
2024-07-12 12:44:33,907 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=82.8 pTM=0.6 ipTM=0.204 tol=1.26
2024-07-12 12:44:50,916 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=82.9 pTM=0.613 ipTM=0.25 tol=1.76
2024-07-12 12:45:07,935 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=82.5 pTM=0.608 ipTM=0.23 tol=1.13
2024-07-12 12:45:24,972 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=83.1 pTM=0.608 ipTM=0.224 tol=1.52
2024-07-12 12:45:42,003 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=82.7 pTM=0.601 ipTM=0.211 tol=1.78
2024-07-12 12:45:59,022 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=82.8 pTM=0.613 ipTM=0.25 tol=1.37
2024-07-12 12:46:16,050 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=82.6 pTM=0.603 ipTM=0.22 tol=1.3
2024-07-12 12:46:33,083 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=83 pTM=0.604 ipTM=0.223 tol=0.762
2024-07-12 12:46:50,101 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=82.6 pTM=0.599 ipTM=0.211 tol=1.12
2024-07-12 12:47:07,104 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=82.6 pTM=0.608 ipTM=0.239 tol=1.09
2024-07-12 12:47:24,123 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=82.7 pTM=0.601 ipTM=0.214 tol=1.52
2024-07-12 12:47:41,144 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=82.8 pTM=0.605 ipTM=0.223 tol=1.69
2024-07-12 12:47:58,157 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=82.5 pTM=0.595 ipTM=0.202 tol=1.48
2024-07-12 12:48:15,181 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=83.1 pTM=0.605 ipTM=0.219 tol=1.11
2024-07-12 12:48:32,195 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=82.4 pTM=0.598 ipTM=0.212 tol=1.26
2024-07-12 12:48:49,199 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=82.6 pTM=0.606 ipTM=0.239 tol=1.7
2024-07-12 12:49:06,212 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=82.4 pTM=0.602 ipTM=0.22 tol=1.38
2024-07-12 12:49:23,235 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=82.9 pTM=0.606 ipTM=0.227 tol=1.19
2024-07-12 12:49:40,238 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=82.3 pTM=0.598 ipTM=0.213 tol=1.27
2024-07-12 12:49:57,247 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=82.7 pTM=0.604 ipTM=0.222 tol=2.79
2024-07-12 12:50:14,257 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=82.2 pTM=0.593 ipTM=0.205 tol=2.29
2024-07-12 12:50:31,260 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=82.6 pTM=0.604 ipTM=0.227 tol=1.32
2024-07-12 12:50:48,254 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=81.5 pTM=0.623 ipTM=0.285 tol=3.02
2024-07-12 12:51:05,284 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=82.7 pTM=0.591 ipTM=0.197 tol=2.47
2024-07-12 12:51:22,301 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=82.5 pTM=0.598 ipTM=0.207 tol=1.56
2024-07-12 12:51:39,317 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=82.8 pTM=0.605 ipTM=0.229 tol=1.19
2024-07-12 12:51:39,317 alphafold2_multimer_v3_model_1_seed_000 took 754.9s (30 recycles)
2024-07-12 12:51:56,959 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=82.1 pTM=0.636 ipTM=0.282
2024-07-12 12:52:14,004 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=82.5 pTM=0.607 ipTM=0.224 tol=8.18
2024-07-12 12:52:31,025 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=82.4 pTM=0.586 ipTM=0.189 tol=1.86
2024-07-12 12:52:48,044 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=82.8 pTM=0.59 ipTM=0.209 tol=2.2
2024-07-12 12:53:05,062 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=83 pTM=0.598 ipTM=0.223 tol=2.31
2024-07-12 12:53:22,083 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=83.2 pTM=0.601 ipTM=0.232 tol=0.902
2024-07-12 12:53:39,092 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=82.9 pTM=0.596 ipTM=0.23 tol=1.04
2024-07-12 12:53:56,108 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=83.2 pTM=0.603 ipTM=0.238 tol=1.06
2024-07-12 12:54:13,110 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=82.9 pTM=0.596 ipTM=0.231 tol=0.918
2024-07-12 12:54:30,120 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=83.1 pTM=0.599 ipTM=0.234 tol=0.984
2024-07-12 12:54:47,124 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=83.1 pTM=0.597 ipTM=0.227 tol=1.01
2024-07-12 12:55:04,138 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=83.1 pTM=0.599 ipTM=0.234 tol=1
2024-07-12 12:55:21,144 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=82.9 pTM=0.593 ipTM=0.224 tol=0.922
2024-07-12 12:55:38,158 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=83.1 pTM=0.601 ipTM=0.233 tol=0.796
2024-07-12 12:55:55,156 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=82.9 pTM=0.592 ipTM=0.221 tol=0.773
2024-07-12 12:56:12,165 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=83.1 pTM=0.601 ipTM=0.236 tol=0.712
2024-07-12 12:56:29,167 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=83 pTM=0.595 ipTM=0.23 tol=1.08
2024-07-12 12:56:46,175 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=82.8 pTM=0.594 ipTM=0.229 tol=1.32
2024-07-12 12:57:03,182 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=83 pTM=0.589 ipTM=0.214 tol=1.26
2024-07-12 12:57:20,191 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=82.9 pTM=0.591 ipTM=0.215 tol=0.645
2024-07-12 12:57:37,186 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=82.6 pTM=0.589 ipTM=0.22 tol=0.555
2024-07-12 12:57:54,187 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=82.8 pTM=0.594 ipTM=0.23 tol=0.626
2024-07-12 12:58:11,193 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=82.8 pTM=0.59 ipTM=0.226 tol=0.726
2024-07-12 12:58:28,191 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=82.8 pTM=0.601 ipTM=0.246 tol=0.915
2024-07-12 12:58:45,194 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=82.6 pTM=0.591 ipTM=0.228 tol=0.985
2024-07-12 12:59:02,198 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=82.9 pTM=0.597 ipTM=0.239 tol=0.731
2024-07-12 12:59:19,200 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=82.7 pTM=0.594 ipTM=0.235 tol=0.928
2024-07-12 12:59:36,218 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=82.7 pTM=0.593 ipTM=0.226 tol=1.24
2024-07-12 12:59:53,218 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=82.7 pTM=0.587 ipTM=0.224 tol=0.939
2024-07-12 13:00:10,220 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=82.9 pTM=0.597 ipTM=0.236 tol=0.964
2024-07-12 13:00:27,213 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=82.6 pTM=0.59 ipTM=0.228 tol=0.747
2024-07-12 13:00:27,214 alphafold2_multimer_v3_model_2_seed_000 took 527.3s (30 recycles)
2024-07-12 13:00:44,886 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=82.6 pTM=0.617 ipTM=0.231
2024-07-12 13:01:01,950 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=82.4 pTM=0.605 ipTM=0.204 tol=3.47
2024-07-12 13:01:18,989 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=82.7 pTM=0.604 ipTM=0.208 tol=1.69
2024-07-12 13:01:36,025 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=82.7 pTM=0.597 ipTM=0.196 tol=1.59
2024-07-12 13:01:53,069 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=82.9 pTM=0.598 ipTM=0.189 tol=1.6
2024-07-12 13:02:10,102 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=83.1 pTM=0.604 ipTM=0.21 tol=0.632
2024-07-12 13:02:27,153 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=82.9 pTM=0.596 ipTM=0.183 tol=1.78
2024-07-12 13:02:44,193 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=83.1 pTM=0.602 ipTM=0.205 tol=1.05
2024-07-12 13:03:01,216 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=83 pTM=0.606 ipTM=0.219 tol=1.66
2024-07-12 13:03:18,241 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=83.2 pTM=0.603 ipTM=0.207 tol=0.725
2024-07-12 13:03:35,258 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=83 pTM=0.611 ipTM=0.231 tol=0.846
2024-07-12 13:03:52,288 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=83.3 pTM=0.605 ipTM=0.216 tol=0.432
2024-07-12 13:03:52,288 alphafold2_multimer_v3_model_3_seed_000 took 204.5s (11 recycles)
2024-07-12 13:04:09,929 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=81.8 pTM=0.606 ipTM=0.236
2024-07-12 13:04:26,986 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=81.6 pTM=0.594 ipTM=0.207 tol=5.42
2024-07-12 13:04:44,029 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=81.4 pTM=0.591 ipTM=0.207 tol=1.16
2024-07-12 13:05:01,081 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=81.9 pTM=0.589 ipTM=0.193 tol=2.52
2024-07-12 13:05:18,120 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=81.8 pTM=0.588 ipTM=0.201 tol=1.33
2024-07-12 13:05:35,153 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=81.8 pTM=0.586 ipTM=0.197 tol=1.51
2024-07-12 13:05:52,191 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=81.7 pTM=0.583 ipTM=0.188 tol=1.34
2024-07-12 13:06:09,218 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=81.9 pTM=0.591 ipTM=0.209 tol=1.31
2024-07-12 13:06:26,244 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=81.3 pTM=0.585 ipTM=0.198 tol=2.61
2024-07-12 13:06:43,269 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=81.8 pTM=0.588 ipTM=0.212 tol=1.63
2024-07-12 13:07:00,292 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=81.1 pTM=0.579 ipTM=0.19 tol=1.2
2024-07-12 13:07:17,309 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=81.2 pTM=0.582 ipTM=0.2 tol=1.6
2024-07-12 13:07:34,336 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=81.2 pTM=0.581 ipTM=0.192 tol=1.4
2024-07-12 13:07:51,357 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=81.1 pTM=0.582 ipTM=0.204 tol=2.05
2024-07-12 13:08:08,385 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=80.9 pTM=0.576 ipTM=0.19 tol=1.31
2024-07-12 13:08:25,400 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=81 pTM=0.583 ipTM=0.215 tol=2.12
2024-07-12 13:08:42,430 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=81 pTM=0.576 ipTM=0.191 tol=2.86
2024-07-12 13:08:59,441 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=81.2 pTM=0.581 ipTM=0.205 tol=2.35
2024-07-12 13:09:16,467 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=81.1 pTM=0.58 ipTM=0.193 tol=1.56
2024-07-12 13:09:33,473 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=80.9 pTM=0.585 ipTM=0.224 tol=1.3
2024-07-12 13:09:50,494 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=80.8 pTM=0.58 ipTM=0.199 tol=2.24
2024-07-12 13:10:07,519 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=81.2 pTM=0.582 ipTM=0.205 tol=2.11
2024-07-12 13:10:24,542 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=80.5 pTM=0.574 ipTM=0.188 tol=1.83
2024-07-12 13:10:41,553 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=80.9 pTM=0.583 ipTM=0.215 tol=2.07
2024-07-12 13:10:58,574 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=80.6 pTM=0.573 ipTM=0.192 tol=2.25
2024-07-12 13:11:15,596 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=81.2 pTM=0.58 ipTM=0.199 tol=1.49
2024-07-12 13:11:32,625 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=80.8 pTM=0.578 ipTM=0.193 tol=1.46
2024-07-12 13:11:49,655 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=81.2 pTM=0.582 ipTM=0.201 tol=1.46
2024-07-12 13:12:06,671 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=80.4 pTM=0.582 ipTM=0.216 tol=2.38
2024-07-12 13:12:23,699 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=81.2 pTM=0.583 ipTM=0.204 tol=2.41
2024-07-12 13:12:40,704 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=80.4 pTM=0.585 ipTM=0.222 tol=3.08
2024-07-12 13:12:40,705 alphafold2_multimer_v3_model_4_seed_000 took 527.8s (30 recycles)
2024-07-12 13:12:58,361 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=81.6 pTM=0.624 ipTM=0.275
2024-07-12 13:13:15,426 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=81.6 pTM=0.596 ipTM=0.202 tol=3.79
2024-07-12 13:13:32,477 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=81.9 pTM=0.592 ipTM=0.209 tol=1.96
2024-07-12 13:13:49,539 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=82.4 pTM=0.595 ipTM=0.201 tol=1.32
2024-07-12 13:14:06,589 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=82.5 pTM=0.597 ipTM=0.212 tol=1.48
2024-07-12 13:14:23,643 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=82.2 pTM=0.594 ipTM=0.2 tol=1.45
2024-07-12 13:14:40,688 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=82.6 pTM=0.592 ipTM=0.197 tol=1.36
2024-07-12 13:14:57,753 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=82.4 pTM=0.597 ipTM=0.203 tol=1.33
2024-07-12 13:15:14,794 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=82.2 pTM=0.594 ipTM=0.204 tol=1.63
2024-07-12 13:15:31,836 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=82.1 pTM=0.592 ipTM=0.196 tol=1.38
2024-07-12 13:15:48,868 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=82.1 pTM=0.59 ipTM=0.197 tol=1.43
2024-07-12 13:16:05,908 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=82.1 pTM=0.591 ipTM=0.198 tol=1.25
2024-07-12 13:16:22,948 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=82.2 pTM=0.586 ipTM=0.188 tol=1.13
2024-07-12 13:16:39,986 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=81.8 pTM=0.588 ipTM=0.193 tol=1.33
2024-07-12 13:16:57,016 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=81.9 pTM=0.586 ipTM=0.192 tol=1.46
2024-07-12 13:17:14,064 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=81.9 pTM=0.587 ipTM=0.192 tol=1.59
2024-07-12 13:17:31,096 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=82 pTM=0.587 ipTM=0.197 tol=1.36
2024-07-12 13:17:48,142 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=82.1 pTM=0.589 ipTM=0.191 tol=1.09
2024-07-12 13:18:05,186 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=82.3 pTM=0.591 ipTM=0.202 tol=1.46
2024-07-12 13:18:22,223 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=81.8 pTM=0.588 ipTM=0.196 tol=1.14
2024-07-12 13:18:39,259 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=82.1 pTM=0.59 ipTM=0.214 tol=1.69
2024-07-12 13:18:56,293 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=81.8 pTM=0.597 ipTM=0.223 tol=1.88
2024-07-12 13:19:13,339 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=82.2 pTM=0.591 ipTM=0.202 tol=1.48
2024-07-12 13:19:30,380 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=81.8 pTM=0.586 ipTM=0.192 tol=1.41
2024-07-12 13:19:47,418 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=81.8 pTM=0.583 ipTM=0.191 tol=1.27
2024-07-12 13:20:04,463 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=81.8 pTM=0.586 ipTM=0.193 tol=1.19
2024-07-12 13:20:21,500 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=82.2 pTM=0.589 ipTM=0.201 tol=1.09
2024-07-12 13:20:38,546 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=81.8 pTM=0.583 ipTM=0.189 tol=0.955
2024-07-12 13:20:55,587 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=82 pTM=0.585 ipTM=0.197 tol=1.1
2024-07-12 13:21:12,631 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=81.8 pTM=0.583 ipTM=0.193 tol=1.09
2024-07-12 13:21:29,668 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=82.1 pTM=0.589 ipTM=0.204 tol=1.03
2024-07-12 13:21:29,668 alphafold2_multimer_v3_model_5_seed_000 took 528.4s (30 recycles)
2024-07-12 13:21:30,266 reranking models by 'multimer' metric
2024-07-12 13:21:50,805 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 13:22:36,050 Relaxation took 65.8s
2024-07-12 13:22:36,050 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=82.8 pTM=0.605 ipTM=0.229
2024-07-12 13:23:07,257 Relaxation took 31.2s
2024-07-12 13:23:07,257 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=82.6 pTM=0.59 ipTM=0.228
2024-07-12 13:23:43,845 Relaxation took 36.6s
2024-07-12 13:23:43,845 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=80.4 pTM=0.585 ipTM=0.222
2024-07-12 13:24:14,828 Relaxation took 31.0s
2024-07-12 13:24:14,828 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=83.3 pTM=0.605 ipTM=0.216
2024-07-12 13:24:44,736 Relaxation took 29.9s
2024-07-12 13:24:44,736 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=82.1 pTM=0.589 ipTM=0.204
2024-07-12 13:24:47,539 Done