2024-07-12 12:50:51,919 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 12:50:52,230 Running on GPU
2024-07-12 12:51:01,460 Found 6 citations for tools or databases
2024-07-12 12:51:01,460 Query 1/1: RAD52_RHG15 (length 893)
2024-07-12 12:51:01,953 Sleeping for 10s. Reason: PENDING
2024-07-12 12:51:12,391 Sleeping for 5s. Reason: RUNNING
2024-07-12 12:51:17,814 Sleeping for 9s. Reason: RUNNING
2024-07-12 12:51:27,237 Sleeping for 5s. Reason: RUNNING
2024-07-12 12:51:32,663 Sleeping for 7s. Reason: RUNNING
2024-07-12 12:51:40,075 Sleeping for 5s. Reason: RUNNING
2024-07-12 12:51:45,498 Sleeping for 5s. Reason: RUNNING
2024-07-12 12:51:50,920 Sleeping for 8s. Reason: RUNNING
2024-07-12 12:51:59,340 Sleeping for 5s. Reason: RUNNING
2024-07-12 12:52:04,751 Sleeping for 7s. Reason: RUNNING
2024-07-12 12:52:12,189 Sleeping for 7s. Reason: RUNNING
2024-07-12 12:52:19,632 Sleeping for 5s. Reason: RUNNING
2024-07-12 12:52:25,061 Sleeping for 9s. Reason: RUNNING
2024-07-12 12:52:34,489 Sleeping for 10s. Reason: RUNNING
2024-07-12 12:52:46,686 Sleeping for 8s. Reason: PENDING
2024-07-12 12:52:55,112 Sleeping for 8s. Reason: RUNNING
2024-07-12 12:53:03,534 Sleeping for 8s. Reason: RUNNING
2024-07-12 12:53:11,961 Sleeping for 9s. Reason: RUNNING
2024-07-12 12:53:21,417 Sleeping for 10s. Reason: RUNNING
2024-07-12 12:53:31,843 Sleeping for 8s. Reason: RUNNING
2024-07-12 12:53:40,255 Sleeping for 9s. Reason: RUNNING
2024-07-12 12:53:49,693 Sleeping for 7s. Reason: RUNNING
2024-07-12 12:53:57,111 Sleeping for 6s. Reason: RUNNING
2024-07-12 12:54:03,546 Sleeping for 8s. Reason: RUNNING
2024-07-12 12:54:14,658 Setting max_seq=508, max_extra_seq=2048
2024-07-12 12:58:10,345 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=53.7 pTM=0.341 ipTM=0.189
2024-07-12 12:58:27,850 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=54.9 pTM=0.322 ipTM=0.154 tol=13.9
2024-07-12 12:58:45,383 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=55.4 pTM=0.322 ipTM=0.147 tol=6.05
2024-07-12 12:59:02,961 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=56 pTM=0.317 ipTM=0.146 tol=4.43
2024-07-12 12:59:20,563 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=56 pTM=0.318 ipTM=0.145 tol=3.64
2024-07-12 12:59:38,173 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=56.2 pTM=0.316 ipTM=0.144 tol=2.99
2024-07-12 12:59:55,804 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=56.1 pTM=0.314 ipTM=0.145 tol=4.35
2024-07-12 13:00:13,435 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=56.2 pTM=0.314 ipTM=0.16 tol=2.87
2024-07-12 13:00:31,076 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=56.2 pTM=0.314 ipTM=0.143 tol=3.23
2024-07-12 13:00:48,718 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=56.4 pTM=0.315 ipTM=0.145 tol=4.45
2024-07-12 13:01:06,358 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=56.1 pTM=0.314 ipTM=0.148 tol=5.17
2024-07-12 13:01:24,012 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=56.4 pTM=0.315 ipTM=0.159 tol=3.44
2024-07-12 13:01:41,672 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=56.4 pTM=0.315 ipTM=0.145 tol=2.41
2024-07-12 13:01:59,327 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=56.5 pTM=0.316 ipTM=0.143 tol=2.16
2024-07-12 13:02:16,992 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=56.2 pTM=0.315 ipTM=0.145 tol=2.53
2024-07-12 13:02:34,653 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=56.4 pTM=0.316 ipTM=0.155 tol=1.85
2024-07-12 13:02:52,323 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=56.5 pTM=0.316 ipTM=0.147 tol=2.7
2024-07-12 13:03:09,985 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=56.1 pTM=0.316 ipTM=0.151 tol=2.74
2024-07-12 13:03:27,652 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=56.3 pTM=0.317 ipTM=0.148 tol=2.21
2024-07-12 13:03:45,308 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=56.2 pTM=0.316 ipTM=0.155 tol=2.34
2024-07-12 13:04:02,955 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=56.1 pTM=0.316 ipTM=0.161 tol=3.4
2024-07-12 13:04:20,592 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=56.2 pTM=0.315 ipTM=0.15 tol=2.65
2024-07-12 13:04:38,234 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=56.2 pTM=0.316 ipTM=0.156 tol=2.69
2024-07-12 13:04:55,902 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=56.4 pTM=0.317 ipTM=0.151 tol=2.44
2024-07-12 13:05:13,557 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=56.2 pTM=0.317 ipTM=0.157 tol=1.81
2024-07-12 13:05:31,213 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=56.2 pTM=0.316 ipTM=0.148 tol=1.37
2024-07-12 13:05:48,864 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=56.3 pTM=0.317 ipTM=0.155 tol=2.13
2024-07-12 13:06:06,514 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=56.2 pTM=0.317 ipTM=0.147 tol=2.62
2024-07-12 13:06:24,179 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=56.2 pTM=0.316 ipTM=0.147 tol=1.94
2024-07-12 13:06:41,843 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=56.2 pTM=0.316 ipTM=0.152 tol=1.7
2024-07-12 13:06:59,502 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=56.2 pTM=0.316 ipTM=0.149 tol=2.79
2024-07-12 13:06:59,503 alphafold2_multimer_v3_model_1_seed_000 took 711.8s (30 recycles)
2024-07-12 13:07:17,738 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=55.8 pTM=0.328 ipTM=0.152
2024-07-12 13:07:35,478 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=57.9 pTM=0.324 ipTM=0.148 tol=13
2024-07-12 13:07:53,247 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=57.8 pTM=0.324 ipTM=0.148 tol=6.68
2024-07-12 13:08:10,999 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=57.8 pTM=0.323 ipTM=0.144 tol=4.8
2024-07-12 13:08:28,756 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=58.1 pTM=0.324 ipTM=0.147 tol=3.79
2024-07-12 13:08:46,516 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=58.2 pTM=0.323 ipTM=0.146 tol=2.43
2024-07-12 13:09:04,279 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=58.2 pTM=0.321 ipTM=0.142 tol=2.58
2024-07-12 13:09:22,029 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=58.2 pTM=0.322 ipTM=0.146 tol=2.71
2024-07-12 13:09:39,783 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=58 pTM=0.323 ipTM=0.147 tol=1.8
2024-07-12 13:09:57,542 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=58 pTM=0.323 ipTM=0.148 tol=3.08
2024-07-12 13:10:15,296 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=58.1 pTM=0.322 ipTM=0.144 tol=2.71
2024-07-12 13:10:33,050 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=58.2 pTM=0.323 ipTM=0.145 tol=4.17
2024-07-12 13:10:50,802 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=58.1 pTM=0.323 ipTM=0.145 tol=4.75
2024-07-12 13:11:08,560 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=58 pTM=0.323 ipTM=0.149 tol=1.94
2024-07-12 13:11:26,320 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=57.9 pTM=0.323 ipTM=0.147 tol=2.28
2024-07-12 13:11:44,072 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=57.9 pTM=0.323 ipTM=0.146 tol=1.33
2024-07-12 13:12:01,826 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=58 pTM=0.323 ipTM=0.146 tol=5.3
2024-07-12 13:12:19,573 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=57.7 pTM=0.323 ipTM=0.149 tol=3.67
2024-07-12 13:12:37,332 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=58 pTM=0.323 ipTM=0.146 tol=5.07
2024-07-12 13:12:55,088 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=57.8 pTM=0.323 ipTM=0.147 tol=1.72
2024-07-12 13:13:12,825 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=57.8 pTM=0.323 ipTM=0.148 tol=1.61
2024-07-12 13:13:30,562 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=57.8 pTM=0.323 ipTM=0.145 tol=5.44
2024-07-12 13:13:48,304 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=57.7 pTM=0.323 ipTM=0.147 tol=4.81
2024-07-12 13:14:06,057 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=57.9 pTM=0.325 ipTM=0.15 tol=1.78
2024-07-12 13:14:23,802 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=57.9 pTM=0.325 ipTM=0.15 tol=2.14
2024-07-12 13:14:41,546 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=58 pTM=0.324 ipTM=0.149 tol=1.48
2024-07-12 13:14:59,297 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=58.2 pTM=0.324 ipTM=0.148 tol=1.56
2024-07-12 13:15:17,049 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=58.1 pTM=0.322 ipTM=0.144 tol=1.98
2024-07-12 13:15:34,806 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=58 pTM=0.323 ipTM=0.146 tol=1.8
2024-07-12 13:15:52,573 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=58 pTM=0.323 ipTM=0.147 tol=1.87
2024-07-12 13:16:10,331 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=57.8 pTM=0.325 ipTM=0.151 tol=2.78
2024-07-12 13:16:10,332 alphafold2_multimer_v3_model_2_seed_000 took 550.3s (30 recycles)
2024-07-12 13:16:28,627 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=55.7 pTM=0.318 ipTM=0.135
2024-07-12 13:16:46,425 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=56.2 pTM=0.311 ipTM=0.127 tol=11.1
2024-07-12 13:17:04,220 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=55.7 pTM=0.311 ipTM=0.126 tol=7.41
2024-07-12 13:17:22,002 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=55.5 pTM=0.311 ipTM=0.125 tol=6.02
2024-07-12 13:17:39,777 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=55.4 pTM=0.313 ipTM=0.128 tol=3.8
2024-07-12 13:17:57,548 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=55.5 pTM=0.314 ipTM=0.129 tol=4.53
2024-07-12 13:18:15,324 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=55.5 pTM=0.313 ipTM=0.13 tol=3.1
2024-07-12 13:18:33,097 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=55.4 pTM=0.313 ipTM=0.13 tol=4.36
2024-07-12 13:18:50,874 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=55.3 pTM=0.313 ipTM=0.129 tol=2.39
2024-07-12 13:19:08,631 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=55.3 pTM=0.313 ipTM=0.13 tol=2.47
2024-07-12 13:19:26,380 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=55.5 pTM=0.312 ipTM=0.129 tol=1.98
2024-07-12 13:19:44,140 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=55.3 pTM=0.312 ipTM=0.13 tol=2.49
2024-07-12 13:20:01,903 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=55.4 pTM=0.312 ipTM=0.13 tol=2.49
2024-07-12 13:20:19,675 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=55.5 pTM=0.313 ipTM=0.132 tol=1.9
2024-07-12 13:20:37,454 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=55.5 pTM=0.312 ipTM=0.129 tol=1.45
2024-07-12 13:20:55,223 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=55.4 pTM=0.313 ipTM=0.128 tol=3.96
2024-07-12 13:21:13,008 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=55.4 pTM=0.312 ipTM=0.128 tol=4.79
2024-07-12 13:21:30,780 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=55.3 pTM=0.312 ipTM=0.128 tol=4.71
2024-07-12 13:21:48,557 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=55.3 pTM=0.312 ipTM=0.128 tol=3.38
2024-07-12 13:22:06,336 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=55.3 pTM=0.313 ipTM=0.128 tol=3.16
2024-07-12 13:22:24,104 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=55.4 pTM=0.312 ipTM=0.129 tol=3.28
2024-07-12 13:22:41,868 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=55.4 pTM=0.312 ipTM=0.131 tol=2.44
2024-07-12 13:22:59,623 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=55.3 pTM=0.313 ipTM=0.13 tol=2.67
2024-07-12 13:23:17,386 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=55.4 pTM=0.312 ipTM=0.13 tol=4.04
2024-07-12 13:23:35,141 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=55.4 pTM=0.311 ipTM=0.129 tol=2.61
2024-07-12 13:23:52,902 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=55.4 pTM=0.311 ipTM=0.135 tol=2.66
2024-07-12 13:24:10,661 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=55.5 pTM=0.313 ipTM=0.13 tol=4.98
2024-07-12 13:24:28,418 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=55.4 pTM=0.312 ipTM=0.129 tol=4.63
2024-07-12 13:24:46,184 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=55.3 pTM=0.312 ipTM=0.126 tol=6.48
2024-07-12 13:25:03,950 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=55.3 pTM=0.312 ipTM=0.128 tol=2.55
2024-07-12 13:25:21,724 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=55.4 pTM=0.312 ipTM=0.128 tol=2.22
2024-07-12 13:25:21,725 alphafold2_multimer_v3_model_3_seed_000 took 550.9s (30 recycles)
2024-07-12 13:25:39,991 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=52.8 pTM=0.369 ipTM=0.256
2024-07-12 13:25:57,790 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=54.2 pTM=0.319 ipTM=0.146 tol=15.3
2024-07-12 13:26:15,602 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=54.3 pTM=0.32 ipTM=0.15 tol=10.5
2024-07-12 13:26:33,357 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=56 pTM=0.422 ipTM=0.371 tol=7.2
2024-07-12 13:26:51,131 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=57.3 pTM=0.46 ipTM=0.446 tol=7.32
2024-07-12 13:27:08,891 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=57.6 pTM=0.463 ipTM=0.449 tol=8.34
2024-07-12 13:27:26,659 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=57.4 pTM=0.463 ipTM=0.45 tol=8.18
2024-07-12 13:27:44,413 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=57.8 pTM=0.467 ipTM=0.456 tol=7.86
2024-07-12 13:28:02,157 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=57.4 pTM=0.462 ipTM=0.448 tol=3.12
2024-07-12 13:28:19,904 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=57.5 pTM=0.463 ipTM=0.452 tol=2.17
2024-07-12 13:28:37,654 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=57.3 pTM=0.463 ipTM=0.449 tol=1.66
2024-07-12 13:28:55,398 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=57.2 pTM=0.461 ipTM=0.448 tol=1.89
2024-07-12 13:29:13,149 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=57.3 pTM=0.463 ipTM=0.449 tol=1.87
2024-07-12 13:29:30,905 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=57.1 pTM=0.46 ipTM=0.446 tol=1.54
2024-07-12 13:29:48,666 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=57.2 pTM=0.461 ipTM=0.447 tol=1.8
2024-07-12 13:30:06,429 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=57.2 pTM=0.461 ipTM=0.448 tol=1.59
2024-07-12 13:30:24,193 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=57.4 pTM=0.462 ipTM=0.449 tol=2.21
2024-07-12 13:30:41,968 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=57.1 pTM=0.46 ipTM=0.449 tol=1.67
2024-07-12 13:30:59,725 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=57.2 pTM=0.461 ipTM=0.449 tol=1.81
2024-07-12 13:31:17,494 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=57.2 pTM=0.462 ipTM=0.449 tol=1.74
2024-07-12 13:31:35,259 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=57.1 pTM=0.46 ipTM=0.447 tol=1.55
2024-07-12 13:31:53,023 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=57.2 pTM=0.461 ipTM=0.448 tol=1.48
2024-07-12 13:32:10,797 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=57.2 pTM=0.461 ipTM=0.447 tol=2.95
2024-07-12 13:32:28,556 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=57.3 pTM=0.462 ipTM=0.448 tol=1.66
2024-07-12 13:32:46,318 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=57.1 pTM=0.46 ipTM=0.447 tol=1.79
2024-07-12 13:33:04,081 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=57.4 pTM=0.461 ipTM=0.448 tol=1.42
2024-07-12 13:33:21,849 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=57.2 pTM=0.461 ipTM=0.449 tol=1.57
2024-07-12 13:33:39,610 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=57 pTM=0.458 ipTM=0.445 tol=2.01
2024-07-12 13:33:57,386 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=57.3 pTM=0.463 ipTM=0.449 tol=2.16
2024-07-12 13:34:15,161 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=57.1 pTM=0.461 ipTM=0.448 tol=2
2024-07-12 13:34:32,942 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=57 pTM=0.46 ipTM=0.446 tol=1.78
2024-07-12 13:34:32,942 alphafold2_multimer_v3_model_4_seed_000 took 550.7s (30 recycles)
2024-07-12 13:34:51,289 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=54.2 pTM=0.33 ipTM=0.159
2024-07-12 13:35:09,140 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=56.1 pTM=0.316 ipTM=0.134 tol=15.4
2024-07-12 13:35:26,989 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=55.9 pTM=0.322 ipTM=0.144 tol=10.5
2024-07-12 13:35:44,837 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=56.4 pTM=0.319 ipTM=0.138 tol=7.88
2024-07-12 13:36:02,690 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=56.3 pTM=0.321 ipTM=0.139 tol=7.36
2024-07-12 13:36:20,512 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=56.2 pTM=0.321 ipTM=0.139 tol=4.54
2024-07-12 13:36:38,335 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=56.5 pTM=0.316 ipTM=0.132 tol=6.55
2024-07-12 13:36:56,168 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=56.6 pTM=0.317 ipTM=0.132 tol=5.39
2024-07-12 13:37:14,000 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=56.4 pTM=0.319 ipTM=0.137 tol=5.1
2024-07-12 13:37:31,826 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=56.3 pTM=0.319 ipTM=0.137 tol=4.75
2024-07-12 13:37:49,650 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=56.5 pTM=0.319 ipTM=0.135 tol=2.12
2024-07-12 13:38:07,486 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=56.5 pTM=0.317 ipTM=0.133 tol=4.66
2024-07-12 13:38:25,317 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=56.5 pTM=0.319 ipTM=0.136 tol=4.68
2024-07-12 13:38:43,154 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=56.2 pTM=0.321 ipTM=0.14 tol=2.89
2024-07-12 13:39:00,997 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=56.2 pTM=0.319 ipTM=0.136 tol=2.74
2024-07-12 13:39:18,832 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=56.4 pTM=0.319 ipTM=0.137 tol=1.77
2024-07-12 13:39:36,671 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=56.5 pTM=0.318 ipTM=0.134 tol=7.25
2024-07-12 13:39:54,499 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=56.5 pTM=0.319 ipTM=0.136 tol=8.23
2024-07-12 13:40:12,326 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=56.6 pTM=0.319 ipTM=0.136 tol=6.31
2024-07-12 13:40:30,146 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=56.4 pTM=0.318 ipTM=0.135 tol=3.31
2024-07-12 13:40:47,963 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=56.4 pTM=0.318 ipTM=0.136 tol=5.04
2024-07-12 13:41:05,789 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=56.1 pTM=0.32 ipTM=0.14 tol=6.11
2024-07-12 13:41:23,616 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=56.1 pTM=0.321 ipTM=0.141 tol=3.06
2024-07-12 13:41:41,441 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=56.4 pTM=0.317 ipTM=0.134 tol=6.71
2024-07-12 13:41:59,269 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=56.5 pTM=0.316 ipTM=0.133 tol=3.66
2024-07-12 13:42:17,089 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=56.6 pTM=0.316 ipTM=0.131 tol=6.48
2024-07-12 13:42:34,911 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=56.5 pTM=0.317 ipTM=0.132 tol=4.72
2024-07-12 13:42:52,730 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=56.6 pTM=0.317 ipTM=0.134 tol=6.3
2024-07-12 13:43:10,545 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=56.5 pTM=0.317 ipTM=0.133 tol=2.91
2024-07-12 13:43:28,362 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=56.5 pTM=0.317 ipTM=0.133 tol=6.66
2024-07-12 13:43:46,188 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=56.6 pTM=0.318 ipTM=0.135 tol=4.64
2024-07-12 13:43:46,189 alphafold2_multimer_v3_model_5_seed_000 took 552.7s (30 recycles)
2024-07-12 13:43:46,692 reranking models by 'multimer' metric
2024-07-12 13:44:04,019 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 13:45:15,034 Relaxation took 88.3s
2024-07-12 13:45:15,034 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=57 pTM=0.46 ipTM=0.446
2024-07-12 13:46:20,568 Relaxation took 65.5s
2024-07-12 13:46:20,568 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=57.8 pTM=0.325 ipTM=0.151
2024-07-12 13:47:22,448 Relaxation took 61.9s
2024-07-12 13:47:22,448 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=56.2 pTM=0.316 ipTM=0.149
2024-07-12 13:48:24,167 Relaxation took 61.7s
2024-07-12 13:48:24,167 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=56.6 pTM=0.318 ipTM=0.135
2024-07-12 13:49:30,211 Relaxation took 66.0s
2024-07-12 13:49:30,211 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=55.4 pTM=0.312 ipTM=0.128
2024-07-12 13:49:31,759 Done