2024-07-12 13:29:31,961 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 13:29:39,626 Running on GPU
2024-07-12 13:29:56,591 Found 6 citations for tools or databases
2024-07-12 13:29:56,592 Query 1/1: RAI2_HECD3 (length 1391)
2024-07-12 13:29:57,077 Sleeping for 8s. Reason: PENDING
2024-07-12 13:30:05,491 Sleeping for 6s. Reason: RUNNING
2024-07-12 13:30:11,903 Sleeping for 6s. Reason: RUNNING
2024-07-12 13:30:18,312 Sleeping for 5s. Reason: RUNNING
2024-07-12 13:30:23,739 Sleeping for 7s. Reason: RUNNING
2024-07-12 13:30:31,180 Sleeping for 8s. Reason: RUNNING
2024-07-12 13:30:39,618 Sleeping for 5s. Reason: RUNNING
2024-07-12 13:30:45,041 Sleeping for 7s. Reason: RUNNING
2024-07-12 13:30:52,491 Sleeping for 7s. Reason: RUNNING
2024-07-12 13:30:59,943 Sleeping for 7s. Reason: RUNNING
2024-07-12 13:31:07,362 Sleeping for 8s. Reason: RUNNING
2024-07-12 13:31:15,792 Sleeping for 6s. Reason: RUNNING
2024-07-12 13:31:22,223 Sleeping for 7s. Reason: RUNNING
2024-07-12 13:31:29,676 Sleeping for 6s. Reason: RUNNING
2024-07-12 13:31:36,117 Sleeping for 6s. Reason: RUNNING
2024-07-12 13:31:42,542 Sleeping for 5s. Reason: RUNNING
2024-07-12 13:31:51,717 Sleeping for 10s. Reason: PENDING
2024-07-12 13:32:02,131 Sleeping for 8s. Reason: RUNNING
2024-07-12 13:32:10,568 Sleeping for 6s. Reason: RUNNING
2024-07-12 13:32:16,989 Sleeping for 9s. Reason: RUNNING
2024-07-12 13:32:26,399 Sleeping for 6s. Reason: RUNNING
2024-07-12 13:32:32,821 Sleeping for 10s. Reason: RUNNING
2024-07-12 13:32:43,244 Sleeping for 7s. Reason: RUNNING
2024-07-12 13:32:55,906 Setting max_seq=508, max_extra_seq=2048
2024-07-12 13:38:39,804 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=55.8 pTM=0.55 ipTM=0.319
2024-07-12 13:39:33,634 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=55.3 pTM=0.521 ipTM=0.216 tol=14.3
2024-07-12 13:40:27,581 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=55.9 pTM=0.534 ipTM=0.213 tol=8.41
2024-07-12 13:41:21,578 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=56.2 pTM=0.529 ipTM=0.207 tol=8.2
2024-07-12 13:42:15,565 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=56.8 pTM=0.534 ipTM=0.244 tol=7.73
2024-07-12 13:43:09,520 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=56.6 pTM=0.533 ipTM=0.225 tol=6.69
2024-07-12 13:44:03,504 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=56.7 pTM=0.531 ipTM=0.237 tol=5.99
2024-07-12 13:44:57,418 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=56.6 pTM=0.533 ipTM=0.248 tol=4.12
2024-07-12 13:45:51,337 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=56.8 pTM=0.533 ipTM=0.26 tol=4.56
2024-07-12 13:46:45,251 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=56.9 pTM=0.533 ipTM=0.255 tol=4.21
2024-07-12 13:47:39,183 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=56.8 pTM=0.533 ipTM=0.256 tol=4.44
2024-07-12 13:48:33,107 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=56.7 pTM=0.531 ipTM=0.252 tol=6.17
2024-07-12 13:49:27,037 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=56.8 pTM=0.531 ipTM=0.26 tol=4.38
2024-07-12 13:50:20,969 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=56.9 pTM=0.534 ipTM=0.257 tol=5.3
2024-07-12 13:51:14,899 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=56.8 pTM=0.532 ipTM=0.261 tol=2.74
2024-07-12 13:52:08,840 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=56.5 pTM=0.528 ipTM=0.254 tol=3.86
2024-07-12 13:53:02,780 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=56.6 pTM=0.53 ipTM=0.257 tol=4.91
2024-07-12 13:53:56,711 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=56.6 pTM=0.528 ipTM=0.249 tol=6.24
2024-07-12 13:54:50,596 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=57 pTM=0.532 ipTM=0.26 tol=4.52
2024-07-12 13:55:44,500 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=56.7 pTM=0.532 ipTM=0.261 tol=4.63
2024-07-12 13:56:38,403 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=56.3 pTM=0.528 ipTM=0.253 tol=5.11
2024-07-12 13:57:32,322 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=56.7 pTM=0.529 ipTM=0.253 tol=5.21
2024-07-12 13:58:26,240 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=56.7 pTM=0.53 ipTM=0.257 tol=9
2024-07-12 13:59:20,140 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=56.7 pTM=0.532 ipTM=0.261 tol=6.94
2024-07-12 14:00:14,069 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=56.4 pTM=0.529 ipTM=0.25 tol=5.64
2024-07-12 14:01:07,982 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=56.7 pTM=0.533 ipTM=0.258 tol=2.52
2024-07-12 14:02:01,901 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=56.5 pTM=0.529 ipTM=0.254 tol=3.6
2024-07-12 14:02:55,818 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=56.7 pTM=0.532 ipTM=0.257 tol=4.93
2024-07-12 14:03:49,715 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=56.5 pTM=0.53 ipTM=0.247 tol=5.66
2024-07-12 14:04:43,611 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=56.5 pTM=0.53 ipTM=0.261 tol=5.88
2024-07-12 14:05:37,508 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=56.6 pTM=0.531 ipTM=0.253 tol=4.61
2024-07-12 14:05:37,510 alphafold2_multimer_v3_model_1_seed_000 took 1901.4s (30 recycles)
2024-07-12 14:06:33,157 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=55.9 pTM=0.548 ipTM=0.274
2024-07-12 14:07:27,199 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=56.9 pTM=0.542 ipTM=0.174 tol=8.98
2024-07-12 14:08:21,258 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=58.1 pTM=0.565 ipTM=0.216 tol=9.04
2024-07-12 14:09:15,314 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=58.3 pTM=0.563 ipTM=0.291 tol=7.03
2024-07-12 14:10:09,376 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=58.2 pTM=0.562 ipTM=0.27 tol=6.43
2024-07-12 14:11:03,422 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=58.4 pTM=0.57 ipTM=0.312 tol=5.29
2024-07-12 14:11:57,449 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=58.3 pTM=0.569 ipTM=0.33 tol=4.45
2024-07-12 14:12:51,472 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=58.5 pTM=0.57 ipTM=0.385 tol=4.44
2024-07-12 14:13:45,493 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=58.6 pTM=0.576 ipTM=0.293 tol=3.79
2024-07-12 14:14:39,493 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=58.6 pTM=0.575 ipTM=0.355 tol=3.04
2024-07-12 14:15:33,481 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=58.6 pTM=0.579 ipTM=0.362 tol=2.92
2024-07-12 14:16:27,467 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=58.7 pTM=0.576 ipTM=0.282 tol=2.62
2024-07-12 14:17:21,436 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=58.5 pTM=0.579 ipTM=0.37 tol=3.08
2024-07-12 14:18:15,423 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=58.5 pTM=0.575 ipTM=0.325 tol=3.53
2024-07-12 14:19:09,414 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=58.2 pTM=0.574 ipTM=0.374 tol=3.61
2024-07-12 14:20:03,443 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=58.3 pTM=0.572 ipTM=0.395 tol=4.52
2024-07-12 14:20:57,432 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=58.3 pTM=0.575 ipTM=0.321 tol=4.39
2024-07-12 14:21:51,404 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=58.8 pTM=0.583 ipTM=0.321 tol=2.88
2024-07-12 14:22:45,357 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=58.5 pTM=0.581 ipTM=0.349 tol=2.45
2024-07-12 14:23:39,345 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=58.8 pTM=0.581 ipTM=0.412 tol=2.96
2024-07-12 14:24:33,306 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=58.3 pTM=0.576 ipTM=0.272 tol=2.93
2024-07-12 14:25:27,263 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=58.7 pTM=0.578 ipTM=0.403 tol=3.28
2024-07-12 14:26:21,211 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=58.3 pTM=0.574 ipTM=0.248 tol=2.47
2024-07-12 14:27:15,200 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=58.3 pTM=0.569 ipTM=0.361 tol=2.68
2024-07-12 14:28:09,176 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=58.2 pTM=0.572 ipTM=0.351 tol=6.91
2024-07-12 14:29:03,169 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=58.6 pTM=0.574 ipTM=0.383 tol=6.21
2024-07-12 14:29:57,149 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=58.2 pTM=0.57 ipTM=0.246 tol=3.36
2024-07-12 14:30:51,136 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=58.5 pTM=0.572 ipTM=0.341 tol=6.13
2024-07-12 14:31:45,065 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=58.3 pTM=0.576 ipTM=0.248 tol=6.04
2024-07-12 14:32:39,009 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=58.6 pTM=0.577 ipTM=0.332 tol=3.57
2024-07-12 14:33:32,934 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=58.4 pTM=0.575 ipTM=0.286 tol=3.8
2024-07-12 14:33:32,936 alphafold2_multimer_v3_model_2_seed_000 took 1673.8s (30 recycles)
2024-07-12 14:34:28,738 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=55.8 pTM=0.553 ipTM=0.185
2024-07-12 14:35:22,906 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=56.3 pTM=0.551 ipTM=0.391 tol=15.8
2024-07-12 14:36:17,032 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=57.1 pTM=0.566 ipTM=0.357 tol=10.8
2024-07-12 14:37:11,177 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=56.4 pTM=0.548 ipTM=0.225 tol=10.1
2024-07-12 14:38:05,337 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=57.2 pTM=0.563 ipTM=0.269 tol=6.21
2024-07-12 14:38:59,473 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=57.1 pTM=0.561 ipTM=0.232 tol=5.77
2024-07-12 14:39:53,599 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=57.2 pTM=0.562 ipTM=0.259 tol=4.68
2024-07-12 14:40:47,714 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=57.1 pTM=0.56 ipTM=0.239 tol=5.91
2024-07-12 14:41:41,813 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=57.3 pTM=0.565 ipTM=0.249 tol=4.31
2024-07-12 14:42:35,948 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=57.4 pTM=0.565 ipTM=0.243 tol=3.76
2024-07-12 14:43:30,075 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=57.6 pTM=0.57 ipTM=0.263 tol=4.6
2024-07-12 14:44:24,201 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=57.5 pTM=0.568 ipTM=0.238 tol=4.71
2024-07-12 14:45:18,324 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=57.4 pTM=0.569 ipTM=0.254 tol=4.2
2024-07-12 14:46:12,449 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=57.1 pTM=0.561 ipTM=0.251 tol=5.35
2024-07-12 14:47:06,549 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=57.4 pTM=0.568 ipTM=0.254 tol=4.88
2024-07-12 14:48:00,661 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=57.4 pTM=0.567 ipTM=0.289 tol=4.26
2024-07-12 14:48:54,741 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=57.4 pTM=0.569 ipTM=0.245 tol=3.17
2024-07-12 14:49:48,844 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=57.6 pTM=0.57 ipTM=0.262 tol=5.03
2024-07-12 14:50:42,918 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=57.5 pTM=0.569 ipTM=0.246 tol=4.29
2024-07-12 14:51:36,997 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=57.4 pTM=0.567 ipTM=0.253 tol=3.78
2024-07-12 14:52:31,086 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=57.4 pTM=0.568 ipTM=0.261 tol=3.05
2024-07-12 14:53:25,151 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=57.3 pTM=0.567 ipTM=0.238 tol=4.94
2024-07-12 14:54:19,218 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=57.7 pTM=0.573 ipTM=0.258 tol=6.99
2024-07-12 14:55:13,289 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=57.5 pTM=0.569 ipTM=0.27 tol=3.74
2024-07-12 14:56:07,369 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=57.6 pTM=0.572 ipTM=0.252 tol=5.27
2024-07-12 14:57:01,429 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=57.5 pTM=0.571 ipTM=0.256 tol=6.49
2024-07-12 14:57:55,493 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=57.8 pTM=0.578 ipTM=0.256 tol=2.67
2024-07-12 14:58:49,550 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=57.6 pTM=0.574 ipTM=0.246 tol=3.09
2024-07-12 14:59:43,585 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=57.5 pTM=0.573 ipTM=0.26 tol=6.79
2024-07-12 15:00:37,623 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=57.4 pTM=0.571 ipTM=0.238 tol=5.41
2024-07-12 15:01:31,678 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=57.5 pTM=0.573 ipTM=0.255 tol=2.54
2024-07-12 15:01:31,679 alphafold2_multimer_v3_model_3_seed_000 took 1677.1s (30 recycles)
2024-07-12 15:02:27,512 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=55.3 pTM=0.557 ipTM=0.184
2024-07-12 15:03:21,744 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=56.5 pTM=0.558 ipTM=0.272 tol=12
2024-07-12 15:04:15,886 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=57.7 pTM=0.577 ipTM=0.485 tol=9.19
2024-07-12 15:05:10,033 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=57.6 pTM=0.577 ipTM=0.293 tol=6.51
2024-07-12 15:06:04,212 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=57.8 pTM=0.578 ipTM=0.265 tol=9.12
2024-07-12 15:06:58,380 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=58.1 pTM=0.582 ipTM=0.526 tol=7.73
2024-07-12 15:07:52,598 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=57.8 pTM=0.576 ipTM=0.259 tol=6.59
2024-07-12 15:08:46,800 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=57.8 pTM=0.578 ipTM=0.233 tol=6.62
2024-07-12 15:09:41,023 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=57.9 pTM=0.578 ipTM=0.246 tol=5.19
2024-07-12 15:10:35,220 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=58.1 pTM=0.581 ipTM=0.247 tol=7.85
2024-07-12 15:11:29,423 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=57.9 pTM=0.578 ipTM=0.244 tol=6.74
2024-07-12 15:12:23,592 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=58.1 pTM=0.583 ipTM=0.306 tol=4.81
2024-07-12 15:13:17,832 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=58.2 pTM=0.581 ipTM=0.24 tol=5.64
2024-07-12 15:14:12,043 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=58.1 pTM=0.58 ipTM=0.256 tol=4.6
2024-07-12 15:15:06,259 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=58.1 pTM=0.583 ipTM=0.488 tol=5.31
2024-07-12 15:16:00,455 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=58 pTM=0.582 ipTM=0.258 tol=6.67
2024-07-12 15:16:54,683 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=57.8 pTM=0.581 ipTM=0.255 tol=6.48
2024-07-12 15:17:48,915 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=58.1 pTM=0.583 ipTM=0.246 tol=4.58
2024-07-12 15:18:43,157 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=57.8 pTM=0.58 ipTM=0.234 tol=7.61
2024-07-12 15:19:37,360 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=58.2 pTM=0.585 ipTM=0.26 tol=4.24
2024-07-12 15:20:31,589 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=57.9 pTM=0.582 ipTM=0.263 tol=4.57
2024-07-12 15:21:25,815 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=58 pTM=0.582 ipTM=0.237 tol=6.33
2024-07-12 15:22:20,046 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=57.9 pTM=0.581 ipTM=0.238 tol=5.69
2024-07-12 15:23:14,270 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=57.9 pTM=0.581 ipTM=0.243 tol=3.44
2024-07-12 15:24:08,505 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=57.9 pTM=0.579 ipTM=0.245 tol=3.85
2024-07-12 15:25:02,758 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=57.8 pTM=0.581 ipTM=0.297 tol=4.82
2024-07-12 15:25:56,977 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=57.8 pTM=0.579 ipTM=0.236 tol=3.34
2024-07-12 15:26:51,189 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=57.8 pTM=0.578 ipTM=0.225 tol=3.67
2024-07-12 15:27:45,381 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=57.8 pTM=0.58 ipTM=0.349 tol=4.04
2024-07-12 15:28:39,588 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=57.8 pTM=0.579 ipTM=0.257 tol=4.51
2024-07-12 15:29:33,814 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=57.7 pTM=0.576 ipTM=0.24 tol=3.02
2024-07-12 15:29:33,815 alphafold2_multimer_v3_model_4_seed_000 took 1680.5s (30 recycles)
2024-07-12 15:30:29,673 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=55.6 pTM=0.567 ipTM=0.24
2024-07-12 15:31:23,865 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=55.5 pTM=0.542 ipTM=0.232 tol=10.7
2024-07-12 15:32:18,062 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=55.7 pTM=0.543 ipTM=0.218 tol=8.98
2024-07-12 15:33:12,203 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=55.9 pTM=0.545 ipTM=0.201 tol=8.34
2024-07-12 15:34:06,358 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=56.5 pTM=0.556 ipTM=0.224 tol=8.49
2024-07-12 15:35:00,508 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=56.3 pTM=0.555 ipTM=0.229 tol=4.69
2024-07-12 15:35:54,647 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=56.9 pTM=0.566 ipTM=0.357 tol=5.46
2024-07-12 15:36:48,754 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=56.7 pTM=0.567 ipTM=0.24 tol=6.48
2024-07-12 15:37:42,912 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=56.8 pTM=0.567 ipTM=0.229 tol=4.54
2024-07-12 15:38:37,072 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=56.5 pTM=0.561 ipTM=0.236 tol=3.69
2024-07-12 15:39:31,233 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=56.9 pTM=0.57 ipTM=0.348 tol=4.2
2024-07-12 15:40:25,405 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=57.1 pTM=0.574 ipTM=0.223 tol=5.55
2024-07-12 15:41:19,571 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=56.9 pTM=0.57 ipTM=0.236 tol=5.56
2024-07-12 15:42:13,727 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=56.6 pTM=0.562 ipTM=0.239 tol=5.02
2024-07-12 15:43:07,848 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=56.8 pTM=0.572 ipTM=0.293 tol=6.65
2024-07-12 15:44:01,998 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=57 pTM=0.573 ipTM=0.318 tol=5.99
2024-07-12 15:44:56,122 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=57.2 pTM=0.577 ipTM=0.248 tol=5.66
2024-07-12 15:45:50,233 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=57.3 pTM=0.579 ipTM=0.249 tol=6.05
2024-07-12 15:46:44,346 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=57.2 pTM=0.575 ipTM=0.245 tol=5.46
2024-07-12 15:47:38,453 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=57.3 pTM=0.58 ipTM=0.32 tol=3.82
2024-07-12 15:48:32,566 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=57.2 pTM=0.58 ipTM=0.252 tol=4.52
2024-07-12 15:49:26,673 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=57.3 pTM=0.582 ipTM=0.239 tol=4.86
2024-07-12 15:50:20,764 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=57.6 pTM=0.584 ipTM=0.443 tol=6.16
2024-07-12 15:51:14,857 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=57.2 pTM=0.58 ipTM=0.257 tol=4.28
2024-07-12 15:52:08,968 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=57.5 pTM=0.583 ipTM=0.266 tol=5.71
2024-07-12 15:53:03,072 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=57.3 pTM=0.583 ipTM=0.279 tol=6.04
2024-07-12 15:53:57,200 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=57.4 pTM=0.582 ipTM=0.235 tol=5.73
2024-07-12 15:54:51,304 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=57.4 pTM=0.585 ipTM=0.358 tol=3.51
2024-07-12 15:55:45,413 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=57.2 pTM=0.584 ipTM=0.244 tol=3.45
2024-07-12 15:56:39,492 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=57.2 pTM=0.582 ipTM=0.288 tol=3.46
2024-07-12 15:57:33,597 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=57.4 pTM=0.584 ipTM=0.269 tol=6.46
2024-07-12 15:57:33,599 alphafold2_multimer_v3_model_5_seed_000 took 1678.1s (30 recycles)
2024-07-12 15:57:35,252 reranking models by 'multimer' metric
2024-07-12 15:57:49,602 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 16:01:47,059 Relaxation took 251.8s
2024-07-12 16:01:47,059 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=58.4 pTM=0.575 ipTM=0.286
2024-07-12 16:06:34,286 Relaxation took 287.2s
2024-07-12 16:06:34,287 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=57.4 pTM=0.584 ipTM=0.269
2024-07-12 16:09:59,364 Relaxation took 205.1s
2024-07-12 16:09:59,364 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=57.5 pTM=0.573 ipTM=0.255
2024-07-12 16:12:39,259 Relaxation took 159.9s
2024-07-12 16:12:39,259 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=56.6 pTM=0.531 ipTM=0.253
2024-07-12 16:15:38,526 Relaxation took 179.3s
2024-07-12 16:15:38,526 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=57.7 pTM=0.576 ipTM=0.24
2024-07-12 16:15:43,094 Done