2024-07-12 14:06:49,283 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 14:06:49,627 Running on GPU
2024-07-12 14:07:04,115 Found 6 citations for tools or databases
2024-07-12 14:07:04,116 Query 1/1: REC16_SYNJ2 (length 1601)
2024-07-12 14:07:04,580 Sleeping for 7s. Reason: PENDING
2024-07-12 14:07:12,003 Sleeping for 5s. Reason: RUNNING
2024-07-12 14:07:17,448 Sleeping for 9s. Reason: RUNNING
2024-07-12 14:07:26,870 Sleeping for 8s. Reason: RUNNING
2024-07-12 14:07:35,300 Sleeping for 9s. Reason: RUNNING
2024-07-12 14:07:44,725 Sleeping for 10s. Reason: RUNNING
2024-07-12 14:07:55,170 Sleeping for 9s. Reason: RUNNING
2024-07-12 14:08:04,604 Sleeping for 7s. Reason: RUNNING
2024-07-12 14:08:12,051 Sleeping for 7s. Reason: RUNNING
2024-07-12 14:08:19,460 Sleeping for 9s. Reason: RUNNING
2024-07-12 14:08:28,885 Sleeping for 8s. Reason: RUNNING
2024-07-12 14:08:37,301 Sleeping for 7s. Reason: RUNNING
2024-07-12 14:08:44,720 Sleeping for 10s. Reason: RUNNING
2024-07-12 14:08:55,177 Sleeping for 8s. Reason: RUNNING
2024-07-12 14:09:07,018 Sleeping for 5s. Reason: PENDING
2024-07-12 14:09:12,425 Sleeping for 8s. Reason: RUNNING
2024-07-12 14:09:20,836 Sleeping for 9s. Reason: RUNNING
2024-07-12 14:09:30,283 Sleeping for 5s. Reason: RUNNING
2024-07-12 14:09:35,733 Sleeping for 7s. Reason: RUNNING
2024-07-12 14:09:43,145 Sleeping for 6s. Reason: RUNNING
2024-07-12 14:09:49,559 Sleeping for 8s. Reason: RUNNING
2024-07-12 14:09:57,994 Sleeping for 9s. Reason: RUNNING
2024-07-12 14:10:07,425 Sleeping for 9s. Reason: RUNNING
2024-07-12 14:10:16,838 Sleeping for 5s. Reason: RUNNING
2024-07-12 14:10:22,304 Sleeping for 7s. Reason: RUNNING
2024-07-12 14:10:29,741 Sleeping for 6s. Reason: RUNNING
2024-07-12 14:10:40,525 Setting max_seq=508, max_extra_seq=1918
2024-07-12 14:16:06,040 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=59.2 pTM=0.634 ipTM=0.245
2024-07-12 14:17:24,210 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=60.7 pTM=0.642 ipTM=0.287 tol=12.4
2024-07-12 14:18:42,568 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=61.4 pTM=0.647 ipTM=0.28 tol=8.71
2024-07-12 14:20:00,850 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=61.3 pTM=0.645 ipTM=0.29 tol=8.34
2024-07-12 14:21:19,148 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=61.1 pTM=0.643 ipTM=0.263 tol=7.45
2024-07-12 14:22:37,416 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=61.2 pTM=0.644 ipTM=0.274 tol=5.8
2024-07-12 14:23:55,786 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=61.3 pTM=0.644 ipTM=0.294 tol=8.66
2024-07-12 14:25:14,174 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61.4 pTM=0.644 ipTM=0.288 tol=11.9
2024-07-12 14:26:32,574 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=61.2 pTM=0.643 ipTM=0.288 tol=8.81
2024-07-12 14:27:50,952 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=61.4 pTM=0.644 ipTM=0.274 tol=7.71
2024-07-12 14:29:09,356 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=61.4 pTM=0.643 ipTM=0.296 tol=9.55
2024-07-12 14:30:27,707 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=61.6 pTM=0.645 ipTM=0.311 tol=6.72
2024-07-12 14:31:46,062 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=61.3 pTM=0.644 ipTM=0.291 tol=6.87
2024-07-12 14:33:04,453 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=61.5 pTM=0.644 ipTM=0.292 tol=10.3
2024-07-12 14:34:22,830 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=61.3 pTM=0.642 ipTM=0.289 tol=10.1
2024-07-12 14:35:41,198 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=61.3 pTM=0.643 ipTM=0.268 tol=5.87
2024-07-12 14:36:59,579 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=61.1 pTM=0.641 ipTM=0.267 tol=5.76
2024-07-12 14:38:17,993 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=61.2 pTM=0.642 ipTM=0.279 tol=7.18
2024-07-12 14:39:36,393 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=61.1 pTM=0.641 ipTM=0.281 tol=6.88
2024-07-12 14:40:54,791 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=61.2 pTM=0.641 ipTM=0.279 tol=9.37
2024-07-12 14:42:13,205 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=61.4 pTM=0.642 ipTM=0.266 tol=8.23
2024-07-12 14:43:31,606 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=61.3 pTM=0.643 ipTM=0.261 tol=7.96
2024-07-12 14:44:50,032 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=61.2 pTM=0.643 ipTM=0.263 tol=7.17
2024-07-12 14:46:08,465 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=61.3 pTM=0.643 ipTM=0.261 tol=9.16
2024-07-12 14:47:26,885 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=61.2 pTM=0.643 ipTM=0.267 tol=6.82
2024-07-12 14:48:45,254 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=61.2 pTM=0.642 ipTM=0.263 tol=6.61
2024-07-12 14:50:03,644 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=61.1 pTM=0.642 ipTM=0.263 tol=6.64
2024-07-12 14:51:22,034 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=61.2 pTM=0.643 ipTM=0.259 tol=4.73
2024-07-12 14:52:40,398 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=61 pTM=0.641 ipTM=0.266 tol=3.41
2024-07-12 14:53:58,749 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=61.1 pTM=0.641 ipTM=0.258 tol=3.96
2024-07-12 14:55:17,126 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=61 pTM=0.641 ipTM=0.268 tol=4.03
2024-07-12 14:55:17,128 alphafold2_multimer_v3_model_1_seed_000 took 2603.8s (30 recycles)
2024-07-12 14:56:38,004 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=59.7 pTM=0.638 ipTM=0.249
2024-07-12 14:57:56,603 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=61.3 pTM=0.647 ipTM=0.45 tol=12.8
2024-07-12 14:59:15,175 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=61.7 pTM=0.648 ipTM=0.34 tol=8.01
2024-07-12 15:00:33,719 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=61.7 pTM=0.647 ipTM=0.322 tol=6.73
2024-07-12 15:01:52,274 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=61.8 pTM=0.648 ipTM=0.288 tol=5.01
2024-07-12 15:03:10,846 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=61.8 pTM=0.648 ipTM=0.29 tol=6.92
2024-07-12 15:04:29,391 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=61.7 pTM=0.647 ipTM=0.292 tol=3.64
2024-07-12 15:05:47,928 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=61.7 pTM=0.646 ipTM=0.278 tol=3.03
2024-07-12 15:07:06,479 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=61.6 pTM=0.646 ipTM=0.3 tol=4.35
2024-07-12 15:08:25,050 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=61.6 pTM=0.646 ipTM=0.28 tol=2.32
2024-07-12 15:09:43,590 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=61.8 pTM=0.647 ipTM=0.319 tol=2.82
2024-07-12 15:11:02,121 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=61.8 pTM=0.647 ipTM=0.288 tol=2.86
2024-07-12 15:12:20,665 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=61.8 pTM=0.649 ipTM=0.293 tol=4.02
2024-07-12 15:13:39,235 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=61.8 pTM=0.647 ipTM=0.3 tol=3.02
2024-07-12 15:14:57,780 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=61.8 pTM=0.647 ipTM=0.289 tol=2.47
2024-07-12 15:16:16,339 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=61.8 pTM=0.647 ipTM=0.306 tol=2.64
2024-07-12 15:17:34,905 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=61.7 pTM=0.647 ipTM=0.291 tol=3.11
2024-07-12 15:18:53,474 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=61.8 pTM=0.647 ipTM=0.319 tol=3.51
2024-07-12 15:20:12,067 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=61.9 pTM=0.649 ipTM=0.288 tol=2.84
2024-07-12 15:21:30,661 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=61.8 pTM=0.647 ipTM=0.289 tol=2.86
2024-07-12 15:22:49,258 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62.1 pTM=0.649 ipTM=0.289 tol=2.76
2024-07-12 15:24:07,774 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=61.8 pTM=0.648 ipTM=0.291 tol=2.72
2024-07-12 15:25:26,308 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=61.8 pTM=0.648 ipTM=0.288 tol=2.21
2024-07-12 15:26:44,861 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=61.7 pTM=0.647 ipTM=0.287 tol=2.22
2024-07-12 15:28:03,434 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=61.9 pTM=0.649 ipTM=0.289 tol=2.82
2024-07-12 15:29:21,995 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=61.8 pTM=0.648 ipTM=0.297 tol=3
2024-07-12 15:30:40,569 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=61.7 pTM=0.647 ipTM=0.292 tol=2.13
2024-07-12 15:31:59,168 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62 pTM=0.649 ipTM=0.29 tol=2.48
2024-07-12 15:33:17,757 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=61.9 pTM=0.649 ipTM=0.291 tol=2.91
2024-07-12 15:34:36,367 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=61.8 pTM=0.647 ipTM=0.29 tol=3.02
2024-07-12 15:35:54,920 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=61.6 pTM=0.646 ipTM=0.295 tol=3.62
2024-07-12 15:35:54,922 alphafold2_multimer_v3_model_2_seed_000 took 2435.5s (30 recycles)
2024-07-12 15:37:15,142 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=59.6 pTM=0.634 ipTM=0.272
2024-07-12 15:38:33,883 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=61 pTM=0.644 ipTM=0.299 tol=13.3
2024-07-12 15:39:52,618 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=61.2 pTM=0.645 ipTM=0.214 tol=8.98
2024-07-12 15:41:11,387 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=61.4 pTM=0.646 ipTM=0.205 tol=7.96
2024-07-12 15:42:30,166 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=61.4 pTM=0.646 ipTM=0.218 tol=8.61
2024-07-12 15:43:48,878 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=61.3 pTM=0.643 ipTM=0.217 tol=4.35
2024-07-12 15:45:07,696 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=61.5 pTM=0.646 ipTM=0.205 tol=4.94
2024-07-12 15:46:26,430 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=61.4 pTM=0.644 ipTM=0.193 tol=6.99
2024-07-12 15:47:45,183 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61.5 pTM=0.646 ipTM=0.205 tol=8.09
2024-07-12 15:49:03,896 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=61.4 pTM=0.646 ipTM=0.244 tol=6
2024-07-12 15:50:22,665 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=61.7 pTM=0.65 ipTM=0.253 tol=4.33
2024-07-12 15:51:41,388 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=61.5 pTM=0.648 ipTM=0.255 tol=6.71
2024-07-12 15:53:00,058 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=61.5 pTM=0.648 ipTM=0.262 tol=5.48
2024-07-12 15:54:18,762 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=61.6 pTM=0.649 ipTM=0.259 tol=2.87
2024-07-12 15:55:37,422 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=61.5 pTM=0.648 ipTM=0.26 tol=2.56
2024-07-12 15:56:56,132 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=61.5 pTM=0.649 ipTM=0.264 tol=2.54
2024-07-12 15:58:14,811 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=61.3 pTM=0.648 ipTM=0.264 tol=2.19
2024-07-12 15:59:33,446 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.2 pTM=0.647 ipTM=0.267 tol=2.51
2024-07-12 16:00:52,182 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.4 pTM=0.649 ipTM=0.263 tol=5.48
2024-07-12 16:02:10,890 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.5 pTM=0.649 ipTM=0.264 tol=5.34
2024-07-12 16:03:29,506 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=61.4 pTM=0.649 ipTM=0.261 tol=2.19
2024-07-12 16:04:48,139 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=61.5 pTM=0.65 ipTM=0.267 tol=2.57
2024-07-12 16:06:06,774 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61.4 pTM=0.649 ipTM=0.261 tol=2.16
2024-07-12 16:07:25,389 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=61.2 pTM=0.648 ipTM=0.263 tol=1.81
2024-07-12 16:08:44,086 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.5 pTM=0.649 ipTM=0.265 tol=1.85
2024-07-12 16:10:02,777 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.5 pTM=0.649 ipTM=0.263 tol=1.89
2024-07-12 16:11:21,529 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=61.4 pTM=0.648 ipTM=0.256 tol=2.73
2024-07-12 16:12:40,241 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=61.4 pTM=0.648 ipTM=0.261 tol=2.83
2024-07-12 16:13:58,944 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=61.3 pTM=0.647 ipTM=0.258 tol=4.49
2024-07-12 16:15:17,604 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=61.4 pTM=0.647 ipTM=0.264 tol=4.75
2024-07-12 16:16:36,231 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=61.2 pTM=0.647 ipTM=0.26 tol=4.56
2024-07-12 16:16:36,233 alphafold2_multimer_v3_model_3_seed_000 took 2439.8s (30 recycles)
2024-07-12 16:17:56,422 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=60.1 pTM=0.644 ipTM=0.248
2024-07-12 16:19:15,053 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=60.9 pTM=0.652 ipTM=0.28 tol=12.5
2024-07-12 16:20:33,745 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=61.6 pTM=0.654 ipTM=0.274 tol=5.13
2024-07-12 16:21:52,407 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=61.5 pTM=0.653 ipTM=0.27 tol=4.75
2024-07-12 16:23:11,034 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=61.1 pTM=0.649 ipTM=0.258 tol=3.66
2024-07-12 16:24:29,708 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=61.1 pTM=0.649 ipTM=0.26 tol=2.16
2024-07-12 16:25:48,417 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=61.3 pTM=0.65 ipTM=0.251 tol=2.29
2024-07-12 16:27:07,134 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=61.3 pTM=0.649 ipTM=0.254 tol=2.28
2024-07-12 16:28:25,849 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=61.3 pTM=0.649 ipTM=0.251 tol=2.75
2024-07-12 16:29:44,487 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=61.2 pTM=0.649 ipTM=0.258 tol=2.33
2024-07-12 16:31:03,142 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=61.3 pTM=0.649 ipTM=0.257 tol=2.54
2024-07-12 16:32:21,820 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=61.4 pTM=0.65 ipTM=0.251 tol=2.15
2024-07-12 16:33:40,481 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=61.3 pTM=0.65 ipTM=0.251 tol=2.33
2024-07-12 16:34:59,124 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=61.4 pTM=0.65 ipTM=0.257 tol=2.1
2024-07-12 16:36:17,778 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=61.2 pTM=0.648 ipTM=0.251 tol=5.04
2024-07-12 16:37:36,467 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=61.4 pTM=0.65 ipTM=0.25 tol=5.59
2024-07-12 16:38:55,145 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=61.3 pTM=0.65 ipTM=0.255 tol=2.42
2024-07-12 16:40:13,813 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=61.2 pTM=0.648 ipTM=0.248 tol=1.88
2024-07-12 16:41:32,435 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=61.2 pTM=0.648 ipTM=0.259 tol=1.74
2024-07-12 16:42:51,088 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=61.2 pTM=0.648 ipTM=0.255 tol=1.67
2024-07-12 16:44:09,711 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=61.3 pTM=0.648 ipTM=0.25 tol=1.85
2024-07-12 16:45:28,392 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=61.3 pTM=0.65 ipTM=0.256 tol=5.09
2024-07-12 16:46:47,032 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=61.2 pTM=0.647 ipTM=0.249 tol=4.78
2024-07-12 16:48:05,657 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=61.2 pTM=0.649 ipTM=0.255 tol=5.2
2024-07-12 16:49:24,280 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=61.4 pTM=0.65 ipTM=0.257 tol=5.35
2024-07-12 16:50:42,908 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=61.2 pTM=0.648 ipTM=0.255 tol=1.78
2024-07-12 16:52:01,550 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=61.4 pTM=0.65 ipTM=0.258 tol=1.85
2024-07-12 16:53:20,144 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=61.3 pTM=0.648 ipTM=0.255 tol=2.07
2024-07-12 16:54:38,718 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=61.2 pTM=0.648 ipTM=0.258 tol=2.2
2024-07-12 16:55:57,218 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=61 pTM=0.646 ipTM=0.261 tol=2.29
2024-07-12 16:57:15,776 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=61.2 pTM=0.648 ipTM=0.261 tol=1.79
2024-07-12 16:57:15,778 alphafold2_multimer_v3_model_4_seed_000 took 2438.0s (30 recycles)
2024-07-12 16:58:35,785 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=58.3 pTM=0.633 ipTM=0.231
2024-07-12 16:59:54,315 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=60.2 pTM=0.642 ipTM=0.337 tol=8.67
2024-07-12 17:01:12,842 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=60.9 pTM=0.646 ipTM=0.317 tol=6.54
2024-07-12 17:02:31,364 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61 pTM=0.646 ipTM=0.333 tol=2.97
2024-07-12 17:03:49,915 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.2 pTM=0.646 ipTM=0.333 tol=2.76
2024-07-12 17:05:08,414 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=61.2 pTM=0.646 ipTM=0.326 tol=3
2024-07-12 17:06:26,965 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61.3 pTM=0.649 ipTM=0.321 tol=2.5
2024-07-12 17:07:45,537 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=61.5 pTM=0.649 ipTM=0.319 tol=3.12
2024-07-12 17:09:04,124 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61.5 pTM=0.65 ipTM=0.312 tol=8.02
2024-07-12 17:10:22,663 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=61.2 pTM=0.648 ipTM=0.313 tol=8.95
2024-07-12 17:11:41,249 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61.5 pTM=0.651 ipTM=0.32 tol=9.12
2024-07-12 17:12:59,756 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=61.3 pTM=0.648 ipTM=0.318 tol=7.94
2024-07-12 17:14:18,274 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=61.4 pTM=0.649 ipTM=0.314 tol=7.51
2024-07-12 17:15:36,796 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=61.4 pTM=0.65 ipTM=0.309 tol=3.09
2024-07-12 17:16:55,315 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=61.4 pTM=0.649 ipTM=0.31 tol=7.3
2024-07-12 17:18:13,875 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=61.5 pTM=0.651 ipTM=0.297 tol=6.8
2024-07-12 17:19:32,384 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=61.2 pTM=0.649 ipTM=0.301 tol=6.19
2024-07-12 17:20:50,847 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=61.2 pTM=0.647 ipTM=0.297 tol=5.54
2024-07-12 17:22:09,371 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.1 pTM=0.648 ipTM=0.288 tol=3.44
2024-07-12 17:23:27,951 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61.3 pTM=0.65 ipTM=0.294 tol=5.63
2024-07-12 17:24:46,485 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61.2 pTM=0.648 ipTM=0.303 tol=4.91
2024-07-12 17:26:05,008 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=61.3 pTM=0.649 ipTM=0.3 tol=9.75
2024-07-12 17:27:23,529 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61.4 pTM=0.65 ipTM=0.307 tol=8.75
2024-07-12 17:28:41,986 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61 pTM=0.648 ipTM=0.303 tol=6.89
2024-07-12 17:30:00,527 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61.2 pTM=0.649 ipTM=0.294 tol=4.71
2024-07-12 17:31:19,021 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61.1 pTM=0.647 ipTM=0.29 tol=4.93
2024-07-12 17:32:37,528 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=60.9 pTM=0.646 ipTM=0.287 tol=3.75
2024-07-12 17:33:56,129 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=61.4 pTM=0.649 ipTM=0.3 tol=2.51
2024-07-12 17:35:14,675 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.1 pTM=0.646 ipTM=0.306 tol=2.42
2024-07-12 17:36:33,217 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61 pTM=0.646 ipTM=0.293 tol=2.48
2024-07-12 17:37:51,768 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61 pTM=0.646 ipTM=0.288 tol=2.08
2024-07-12 17:37:51,769 alphafold2_multimer_v3_model_5_seed_000 took 2434.5s (30 recycles)
2024-07-12 17:37:53,268 reranking models by 'multimer' metric
2024-07-12 17:37:54,836 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 17:42:12,009 Relaxation took 258.7s
2024-07-12 17:42:12,009 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=61.6 pTM=0.646 ipTM=0.295
2024-07-12 17:45:17,007 Relaxation took 185.0s
2024-07-12 17:45:17,008 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61 pTM=0.646 ipTM=0.288
2024-07-12 17:49:33,636 Relaxation took 256.6s
2024-07-12 17:49:33,636 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=61 pTM=0.641 ipTM=0.268
2024-07-12 17:51:52,187 Relaxation took 138.5s
2024-07-12 17:51:52,187 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=61.2 pTM=0.648 ipTM=0.261
2024-07-12 17:55:05,912 Relaxation took 193.7s
2024-07-12 17:55:05,912 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=61.2 pTM=0.647 ipTM=0.26
2024-07-12 17:55:11,336 Done