2024-07-12 14:07:46,565 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 14:07:46,887 Running on GPU
2024-07-12 14:08:03,256 Found 6 citations for tools or databases
2024-07-12 14:08:03,256 Query 1/1: RED_RAD51 (length 896)
2024-07-12 14:08:03,720 Sleeping for 6s. Reason: PENDING
2024-07-12 14:08:10,138 Sleeping for 6s. Reason: RUNNING
2024-07-12 14:08:16,565 Sleeping for 6s. Reason: RUNNING
2024-07-12 14:08:23,019 Sleeping for 5s. Reason: RUNNING
2024-07-12 14:08:28,444 Sleeping for 9s. Reason: RUNNING
2024-07-12 14:08:37,862 Sleeping for 5s. Reason: RUNNING
2024-07-12 14:08:43,287 Sleeping for 6s. Reason: RUNNING
2024-07-12 14:08:49,697 Sleeping for 6s. Reason: RUNNING
2024-07-12 14:08:56,116 Sleeping for 8s. Reason: RUNNING
2024-07-12 14:09:04,547 Sleeping for 10s. Reason: RUNNING
2024-07-12 14:09:16,682 Sleeping for 8s. Reason: PENDING
2024-07-12 14:09:25,135 Sleeping for 7s. Reason: RUNNING
2024-07-12 14:09:32,572 Sleeping for 5s. Reason: RUNNING
2024-07-12 14:09:38,006 Sleeping for 8s. Reason: RUNNING
2024-07-12 14:09:46,428 Sleeping for 10s. Reason: RUNNING
2024-07-12 14:09:59,416 Setting max_seq=508, max_extra_seq=2048
2024-07-12 14:13:22,550 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=57.7 pTM=0.45 ipTM=0.602
2024-07-12 14:13:37,288 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=56.1 pTM=0.442 ipTM=0.603 tol=12.7
2024-07-12 14:13:52,031 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=55.5 pTM=0.437 ipTM=0.525 tol=5.7
2024-07-12 14:14:06,794 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=55.5 pTM=0.437 ipTM=0.521 tol=4.01
2024-07-12 14:14:21,555 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=55.7 pTM=0.437 ipTM=0.506 tol=2.62
2024-07-12 14:14:36,303 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=56 pTM=0.439 ipTM=0.521 tol=1.71
2024-07-12 14:14:51,057 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=55.6 pTM=0.438 ipTM=0.51 tol=1.7
2024-07-12 14:15:05,807 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=55.3 pTM=0.437 ipTM=0.513 tol=1.57
2024-07-12 14:15:20,575 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=55.4 pTM=0.438 ipTM=0.517 tol=1.34
2024-07-12 14:15:35,339 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=55.1 pTM=0.438 ipTM=0.503 tol=3.14
2024-07-12 14:15:50,099 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=55.5 pTM=0.441 ipTM=0.512 tol=4.59
2024-07-12 14:16:04,864 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=55.6 pTM=0.443 ipTM=0.529 tol=2.53
2024-07-12 14:16:19,633 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=55.2 pTM=0.443 ipTM=0.533 tol=1.42
2024-07-12 14:16:34,437 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=55.6 pTM=0.444 ipTM=0.525 tol=1.12
2024-07-12 14:16:49,226 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=55.2 pTM=0.443 ipTM=0.518 tol=1.38
2024-07-12 14:17:04,011 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=55.2 pTM=0.444 ipTM=0.535 tol=1.12
2024-07-12 14:17:18,790 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=55.4 pTM=0.442 ipTM=0.524 tol=1.13
2024-07-12 14:17:33,561 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=55.5 pTM=0.443 ipTM=0.524 tol=1.31
2024-07-12 14:17:48,340 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=55.6 pTM=0.443 ipTM=0.521 tol=0.945
2024-07-12 14:18:03,114 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=55.4 pTM=0.444 ipTM=0.524 tol=1.12
2024-07-12 14:18:17,895 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=55.4 pTM=0.443 ipTM=0.525 tol=0.96
2024-07-12 14:18:32,679 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=55.4 pTM=0.443 ipTM=0.52 tol=0.866
2024-07-12 14:18:47,464 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=55 pTM=0.442 ipTM=0.533 tol=0.748
2024-07-12 14:19:02,262 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=55.2 pTM=0.444 ipTM=0.538 tol=0.765
2024-07-12 14:19:17,054 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=55.3 pTM=0.447 ipTM=0.54 tol=0.998
2024-07-12 14:19:31,855 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=55.4 pTM=0.445 ipTM=0.527 tol=0.981
2024-07-12 14:19:46,645 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=55.2 pTM=0.444 ipTM=0.527 tol=1.14
2024-07-12 14:20:01,435 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=55.2 pTM=0.444 ipTM=0.516 tol=0.917
2024-07-12 14:20:16,227 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=55.1 pTM=0.443 ipTM=0.511 tol=0.967
2024-07-12 14:20:31,025 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=55.1 pTM=0.443 ipTM=0.524 tol=1.05
2024-07-12 14:20:45,822 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=54.9 pTM=0.442 ipTM=0.519 tol=0.962
2024-07-12 14:20:45,823 alphafold2_multimer_v3_model_1_seed_000 took 568.5s (30 recycles)
2024-07-12 14:21:01,173 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=52.6 pTM=0.42 ipTM=0.173
2024-07-12 14:21:16,058 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=54 pTM=0.422 ipTM=0.176 tol=19.3
2024-07-12 14:21:30,929 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=55 pTM=0.433 ipTM=0.465 tol=8.69
2024-07-12 14:21:45,831 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=55.4 pTM=0.433 ipTM=0.473 tol=7.02
2024-07-12 14:22:00,737 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=56.1 pTM=0.437 ipTM=0.49 tol=5.4
2024-07-12 14:22:15,631 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=56.7 pTM=0.441 ipTM=0.491 tol=2.33
2024-07-12 14:22:30,519 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=57.1 pTM=0.441 ipTM=0.485 tol=2.03
2024-07-12 14:22:45,426 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=56.8 pTM=0.44 ipTM=0.5 tol=3.08
2024-07-12 14:23:00,320 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=57.3 pTM=0.44 ipTM=0.486 tol=4.04
2024-07-12 14:23:15,213 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=57.1 pTM=0.44 ipTM=0.473 tol=2.78
2024-07-12 14:23:30,096 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=57.6 pTM=0.442 ipTM=0.469 tol=4.33
2024-07-12 14:23:44,970 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=57.4 pTM=0.443 ipTM=0.475 tol=3.27
2024-07-12 14:23:59,847 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=57.1 pTM=0.443 ipTM=0.483 tol=2.92
2024-07-12 14:24:14,717 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=57.2 pTM=0.445 ipTM=0.479 tol=3.43
2024-07-12 14:24:29,598 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=56.9 pTM=0.445 ipTM=0.473 tol=2.26
2024-07-12 14:24:44,470 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=56.9 pTM=0.445 ipTM=0.477 tol=1.9
2024-07-12 14:24:59,340 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=57.1 pTM=0.444 ipTM=0.479 tol=1.78
2024-07-12 14:25:14,219 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=56.8 pTM=0.444 ipTM=0.477 tol=1.67
2024-07-12 14:25:29,102 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=56.6 pTM=0.444 ipTM=0.475 tol=1.63
2024-07-12 14:25:43,978 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=56.6 pTM=0.444 ipTM=0.483 tol=1.91
2024-07-12 14:25:58,874 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=56.6 pTM=0.444 ipTM=0.475 tol=1.74
2024-07-12 14:26:13,766 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=56.8 pTM=0.444 ipTM=0.472 tol=1.65
2024-07-12 14:26:28,636 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=56.7 pTM=0.444 ipTM=0.474 tol=1.87
2024-07-12 14:26:43,514 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=56.7 pTM=0.445 ipTM=0.49 tol=1.74
2024-07-12 14:26:58,390 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=56.7 pTM=0.446 ipTM=0.482 tol=3.22
2024-07-12 14:27:13,256 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=57 pTM=0.447 ipTM=0.493 tol=2.28
2024-07-12 14:27:28,138 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=56.8 pTM=0.444 ipTM=0.479 tol=1.66
2024-07-12 14:27:43,014 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=56.8 pTM=0.445 ipTM=0.489 tol=1.93
2024-07-12 14:27:57,893 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=56.3 pTM=0.442 ipTM=0.477 tol=2.78
2024-07-12 14:28:12,771 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=56.5 pTM=0.444 ipTM=0.482 tol=2.88
2024-07-12 14:28:27,643 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=56 pTM=0.443 ipTM=0.486 tol=3.85
2024-07-12 14:28:27,644 alphafold2_multimer_v3_model_2_seed_000 took 461.3s (30 recycles)
2024-07-12 14:28:43,110 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=53 pTM=0.429 ipTM=0.246
2024-07-12 14:28:58,059 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=52.5 pTM=0.433 ipTM=0.575 tol=6.71
2024-07-12 14:29:13,011 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=50.9 pTM=0.425 ipTM=0.544 tol=8.75
2024-07-12 14:29:27,959 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=51.3 pTM=0.427 ipTM=0.54 tol=6.52
2024-07-12 14:29:42,911 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=51.6 pTM=0.428 ipTM=0.544 tol=4.62
2024-07-12 14:29:57,870 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=51.8 pTM=0.429 ipTM=0.544 tol=2.95
2024-07-12 14:30:12,820 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=51.6 pTM=0.429 ipTM=0.525 tol=4.74
2024-07-12 14:30:27,770 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=51.3 pTM=0.427 ipTM=0.53 tol=5.18
2024-07-12 14:30:42,698 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=51.9 pTM=0.438 ipTM=0.527 tol=4.25
2024-07-12 14:30:57,640 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=51.4 pTM=0.428 ipTM=0.513 tol=2.96
2024-07-12 14:31:12,571 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=51.6 pTM=0.436 ipTM=0.507 tol=4.66
2024-07-12 14:31:27,523 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=50.8 pTM=0.431 ipTM=0.518 tol=21.4
2024-07-12 14:31:42,496 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=50.3 pTM=0.424 ipTM=0.512 tol=20.2
2024-07-12 14:31:57,451 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=51.2 pTM=0.427 ipTM=0.524 tol=9.7
2024-07-12 14:32:12,378 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=51.1 pTM=0.432 ipTM=0.531 tol=3.54
2024-07-12 14:32:27,296 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=50.8 pTM=0.427 ipTM=0.532 tol=4.07
2024-07-12 14:32:42,224 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=51 pTM=0.426 ipTM=0.522 tol=3.07
2024-07-12 14:32:57,149 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=51.4 pTM=0.428 ipTM=0.525 tol=4.28
2024-07-12 14:33:12,085 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=51.9 pTM=0.428 ipTM=0.52 tol=3.04
2024-07-12 14:33:27,005 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=51.9 pTM=0.43 ipTM=0.533 tol=2.14
2024-07-12 14:33:41,937 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=52 pTM=0.428 ipTM=0.524 tol=2.47
2024-07-12 14:33:56,864 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=52.1 pTM=0.429 ipTM=0.521 tol=1.32
2024-07-12 14:34:11,788 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=52.2 pTM=0.428 ipTM=0.528 tol=1.63
2024-07-12 14:34:26,716 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=52.2 pTM=0.43 ipTM=0.528 tol=1.15
2024-07-12 14:34:41,645 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=52.2 pTM=0.431 ipTM=0.522 tol=1.96
2024-07-12 14:34:56,569 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=52.4 pTM=0.432 ipTM=0.537 tol=1.52
2024-07-12 14:35:11,503 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=52.2 pTM=0.43 ipTM=0.537 tol=1.32
2024-07-12 14:35:26,428 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=52.1 pTM=0.431 ipTM=0.536 tol=2.4
2024-07-12 14:35:41,356 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=51.9 pTM=0.428 ipTM=0.518 tol=1.93
2024-07-12 14:35:56,288 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=52.2 pTM=0.429 ipTM=0.52 tol=1.51
2024-07-12 14:36:11,228 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=52.1 pTM=0.429 ipTM=0.523 tol=1.26
2024-07-12 14:36:11,229 alphafold2_multimer_v3_model_3_seed_000 took 463.1s (30 recycles)
2024-07-12 14:36:29,129 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=49.6 pTM=0.43 ipTM=0.653
2024-07-12 14:36:44,146 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=49.1 pTM=0.42 ipTM=0.588 tol=20.6
2024-07-12 14:36:59,189 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=49.3 pTM=0.425 ipTM=0.553 tol=9.2
2024-07-12 14:37:14,226 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=49.5 pTM=0.424 ipTM=0.571 tol=7.66
2024-07-12 14:37:29,248 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=49.7 pTM=0.426 ipTM=0.583 tol=8.09
2024-07-12 14:37:44,274 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=49.8 pTM=0.427 ipTM=0.584 tol=4.52
2024-07-12 14:37:59,302 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=49.8 pTM=0.426 ipTM=0.568 tol=3.91
2024-07-12 14:38:14,321 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=49.6 pTM=0.426 ipTM=0.566 tol=5.06
2024-07-12 14:38:29,326 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=49.4 pTM=0.424 ipTM=0.55 tol=4.64
2024-07-12 14:38:44,355 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=49.4 pTM=0.423 ipTM=0.542 tol=5.92
2024-07-12 14:38:59,355 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=49.7 pTM=0.424 ipTM=0.56 tol=3.35
2024-07-12 14:39:14,317 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=49.5 pTM=0.431 ipTM=0.565 tol=13.9
2024-07-12 14:39:29,299 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=49 pTM=0.43 ipTM=0.559 tol=4.31
2024-07-12 14:39:44,282 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=49.5 pTM=0.426 ipTM=0.567 tol=6.63
2024-07-12 14:39:59,291 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=49.6 pTM=0.425 ipTM=0.574 tol=8.04
2024-07-12 14:40:14,326 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=48.8 pTM=0.437 ipTM=0.589 tol=17.5
2024-07-12 14:40:29,345 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=48.2 pTM=0.433 ipTM=0.57 tol=9.01
2024-07-12 14:40:44,354 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=48.3 pTM=0.432 ipTM=0.566 tol=5.81
2024-07-12 14:40:59,362 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=49.1 pTM=0.43 ipTM=0.578 tol=7.85
2024-07-12 14:41:14,380 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=49.2 pTM=0.428 ipTM=0.582 tol=9.98
2024-07-12 14:41:29,394 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=49.6 pTM=0.428 ipTM=0.582 tol=4.34
2024-07-12 14:41:44,400 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=49.8 pTM=0.428 ipTM=0.569 tol=6.67
2024-07-12 14:41:59,402 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=49.8 pTM=0.428 ipTM=0.587 tol=9.59
2024-07-12 14:42:14,398 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=49.7 pTM=0.428 ipTM=0.586 tol=6.87
2024-07-12 14:42:29,375 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=49.7 pTM=0.427 ipTM=0.562 tol=5.04
2024-07-12 14:42:44,359 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=49.9 pTM=0.427 ipTM=0.579 tol=3.59
2024-07-12 14:42:59,336 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=49.9 pTM=0.427 ipTM=0.583 tol=3.66
2024-07-12 14:43:14,302 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=50.2 pTM=0.428 ipTM=0.584 tol=3.76
2024-07-12 14:43:29,274 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=50.1 pTM=0.427 ipTM=0.56 tol=3.76
2024-07-12 14:43:44,253 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=50.2 pTM=0.425 ipTM=0.543 tol=2.34
2024-07-12 14:43:59,229 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=50 pTM=0.424 ipTM=0.543 tol=2.69
2024-07-12 14:43:59,229 alphafold2_multimer_v3_model_4_seed_000 took 465.1s (30 recycles)
2024-07-12 14:44:14,734 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=50.6 pTM=0.403 ipTM=0.222
2024-07-12 14:44:29,718 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=50 pTM=0.403 ipTM=0.449 tol=12.9
2024-07-12 14:44:44,696 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=50.3 pTM=0.405 ipTM=0.448 tol=4.71
2024-07-12 14:44:59,652 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=51.1 pTM=0.408 ipTM=0.471 tol=4.11
2024-07-12 14:45:14,611 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=51.4 pTM=0.407 ipTM=0.467 tol=2.79
2024-07-12 14:45:29,571 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=51.8 pTM=0.412 ipTM=0.484 tol=2.45
2024-07-12 14:45:44,544 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=51.9 pTM=0.41 ipTM=0.479 tol=2.83
2024-07-12 14:45:59,519 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=51.8 pTM=0.411 ipTM=0.481 tol=1.93
2024-07-12 14:46:14,469 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=51.8 pTM=0.41 ipTM=0.477 tol=2.43
2024-07-12 14:46:29,431 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=51.9 pTM=0.411 ipTM=0.482 tol=2.46
2024-07-12 14:46:44,391 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=51.7 pTM=0.409 ipTM=0.478 tol=2.43
2024-07-12 14:46:59,346 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=52 pTM=0.411 ipTM=0.491 tol=2.03
2024-07-12 14:47:14,305 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=51.8 pTM=0.41 ipTM=0.488 tol=1.74
2024-07-12 14:47:29,255 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=52.3 pTM=0.411 ipTM=0.496 tol=2
2024-07-12 14:47:44,208 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=51.9 pTM=0.409 ipTM=0.486 tol=1.84
2024-07-12 14:47:59,135 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=51.9 pTM=0.411 ipTM=0.49 tol=1.36
2024-07-12 14:48:14,078 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=51.8 pTM=0.409 ipTM=0.479 tol=1.73
2024-07-12 14:48:29,039 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=52.1 pTM=0.411 ipTM=0.477 tol=1.69
2024-07-12 14:48:43,995 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=52.1 pTM=0.41 ipTM=0.482 tol=1.69
2024-07-12 14:48:58,955 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=52 pTM=0.411 ipTM=0.485 tol=1.71
2024-07-12 14:49:13,909 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=52 pTM=0.41 ipTM=0.475 tol=1.29
2024-07-12 14:49:28,858 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=51.6 pTM=0.408 ipTM=0.455 tol=1.57
2024-07-12 14:49:43,809 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=51.4 pTM=0.408 ipTM=0.476 tol=1.65
2024-07-12 14:49:58,769 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=51.9 pTM=0.411 ipTM=0.481 tol=1.81
2024-07-12 14:50:13,722 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=51.7 pTM=0.41 ipTM=0.459 tol=1.47
2024-07-12 14:50:28,682 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=52.1 pTM=0.412 ipTM=0.494 tol=2.07
2024-07-12 14:50:43,638 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=51.5 pTM=0.409 ipTM=0.479 tol=1.68
2024-07-12 14:50:58,585 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=51.8 pTM=0.411 ipTM=0.487 tol=1.32
2024-07-12 14:51:13,538 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=51.6 pTM=0.408 ipTM=0.463 tol=1.36
2024-07-12 14:51:28,487 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=51.8 pTM=0.409 ipTM=0.464 tol=1.48
2024-07-12 14:51:43,442 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=51.7 pTM=0.409 ipTM=0.464 tol=1.48
2024-07-12 14:51:43,443 alphafold2_multimer_v3_model_5_seed_000 took 463.7s (30 recycles)
2024-07-12 14:51:43,948 reranking models by 'multimer' metric
2024-07-12 14:52:04,370 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 14:53:08,252 Relaxation took 84.3s
2024-07-12 14:53:08,252 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=50 pTM=0.424 ipTM=0.543
2024-07-12 14:54:17,315 Relaxation took 69.1s
2024-07-12 14:54:17,315 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=52.1 pTM=0.429 ipTM=0.523
2024-07-12 14:54:41,919 Relaxation took 24.6s
2024-07-12 14:54:41,919 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=54.9 pTM=0.442 ipTM=0.519
2024-07-12 14:55:27,933 Relaxation took 46.0s
2024-07-12 14:55:27,933 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=56 pTM=0.443 ipTM=0.486
2024-07-12 14:56:30,433 Relaxation took 62.5s
2024-07-12 14:56:30,433 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=51.7 pTM=0.409 ipTM=0.464
2024-07-12 14:56:35,724 Done