2024-07-12 16:19:27,071 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-12 16:19:30,995 Running on GPU 2024-07-12 16:19:51,144 Found 6 citations for tools or databases 2024-07-12 16:19:51,144 Query 1/1: RGS16_AQ12B (length 497) 2024-07-12 16:19:51,615 Sleeping for 7s. Reason: PENDING 2024-07-12 16:19:59,042 Sleeping for 5s. Reason: RUNNING 2024-07-12 16:20:04,456 Sleeping for 5s. Reason: RUNNING 2024-07-12 16:20:09,874 Sleeping for 9s. Reason: RUNNING 2024-07-12 16:20:19,309 Sleeping for 10s. Reason: RUNNING 2024-07-12 16:20:29,737 Sleeping for 5s. Reason: RUNNING 2024-07-12 16:20:36,674 Sleeping for 7s. Reason: PENDING 2024-07-12 16:20:44,097 Sleeping for 10s. Reason: RUNNING 2024-07-12 16:20:54,525 Sleeping for 9s. Reason: RUNNING 2024-07-12 16:21:09,122 Setting max_seq=508, max_extra_seq=2048 2024-07-12 16:26:11,400 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=68.3 pTM=0.511 ipTM=0.171 2024-07-12 16:26:19,164 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=65.4 pTM=0.492 ipTM=0.202 tol=5.05 2024-07-12 16:26:26,912 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=65.4 pTM=0.494 ipTM=0.215 tol=3 2024-07-12 16:26:34,689 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=70.1 pTM=0.534 ipTM=0.233 tol=2.96 2024-07-12 16:26:42,453 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=71.3 pTM=0.535 ipTM=0.229 tol=4.26 2024-07-12 16:26:50,232 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=71.9 pTM=0.539 ipTM=0.218 tol=2.76 2024-07-12 16:26:57,997 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=72 pTM=0.534 ipTM=0.211 tol=2.01 2024-07-12 16:27:05,781 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=72.1 pTM=0.537 ipTM=0.22 tol=4.14 2024-07-12 16:27:13,554 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=71.9 pTM=0.542 ipTM=0.23 tol=6.5 2024-07-12 16:27:21,330 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=72.8 pTM=0.552 ipTM=0.245 tol=5.44 2024-07-12 16:27:29,103 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=72.6 pTM=0.557 ipTM=0.263 tol=5.55 2024-07-12 16:27:36,882 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=72.2 pTM=0.554 ipTM=0.253 tol=2.31 2024-07-12 16:27:44,647 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=72.7 pTM=0.562 ipTM=0.275 tol=1.41 2024-07-12 16:27:52,427 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=72.6 pTM=0.559 ipTM=0.269 tol=7.01 2024-07-12 16:28:00,197 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=72.5 pTM=0.569 ipTM=0.295 tol=2 2024-07-12 16:28:07,975 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=72.5 pTM=0.567 ipTM=0.292 tol=5.72 2024-07-12 16:28:15,745 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=72.6 pTM=0.575 ipTM=0.31 tol=2.13 2024-07-12 16:28:23,519 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=72.5 pTM=0.573 ipTM=0.299 tol=2.93 2024-07-12 16:28:31,288 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=72.8 pTM=0.58 ipTM=0.319 tol=2.88 2024-07-12 16:28:39,070 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=72.8 pTM=0.573 ipTM=0.299 tol=3.98 2024-07-12 16:28:46,827 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=72.3 pTM=0.578 ipTM=0.319 tol=8.62 2024-07-12 16:28:54,605 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=72.4 pTM=0.569 ipTM=0.294 tol=7.61 2024-07-12 16:29:02,373 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=72.6 pTM=0.577 ipTM=0.314 tol=0.834 2024-07-12 16:29:10,149 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=72.6 pTM=0.576 ipTM=0.306 tol=2.97 2024-07-12 16:29:17,913 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=72.8 pTM=0.582 ipTM=0.326 tol=2.48 2024-07-12 16:29:25,687 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=72.4 pTM=0.57 ipTM=0.298 tol=0.901 2024-07-12 16:29:33,448 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=72.6 pTM=0.582 ipTM=0.326 tol=2.11 2024-07-12 16:29:41,214 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=72.1 pTM=0.569 ipTM=0.298 tol=1.65 2024-07-12 16:29:48,979 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=72.6 pTM=0.584 ipTM=0.329 tol=1.04 2024-07-12 16:29:56,754 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=72.2 pTM=0.571 ipTM=0.298 tol=1.92 2024-07-12 16:30:04,513 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=72.1 pTM=0.575 ipTM=0.315 tol=2.03 2024-07-12 16:30:04,514 alphafold2_multimer_v3_model_1_seed_000 took 474.2s (30 recycles) 2024-07-12 16:30:12,526 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=69.9 pTM=0.499 ipTM=0.139 2024-07-12 16:30:20,294 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=68.9 pTM=0.506 ipTM=0.166 tol=12.9 2024-07-12 16:30:28,047 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.2 pTM=0.485 ipTM=0.179 tol=8.62 2024-07-12 16:30:35,798 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=68.2 pTM=0.511 ipTM=0.201 tol=2.86 2024-07-12 16:30:43,543 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67.6 pTM=0.502 ipTM=0.197 tol=1.55 2024-07-12 16:30:51,287 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67.4 pTM=0.501 ipTM=0.206 tol=1.98 2024-07-12 16:30:59,029 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=67 pTM=0.495 ipTM=0.206 tol=2.04 2024-07-12 16:31:06,774 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=67.6 pTM=0.5 ipTM=0.203 tol=2.27 2024-07-12 16:31:14,519 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=69.2 pTM=0.512 ipTM=0.207 tol=1.74 2024-07-12 16:31:22,278 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=70.4 pTM=0.527 ipTM=0.225 tol=5.45 2024-07-12 16:31:30,032 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=71.2 pTM=0.538 ipTM=0.242 tol=6.48 2024-07-12 16:31:37,786 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=70.9 pTM=0.536 ipTM=0.247 tol=4.5 2024-07-12 16:31:45,540 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=72.1 pTM=0.546 ipTM=0.25 tol=1.56 2024-07-12 16:31:53,297 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=72 pTM=0.544 ipTM=0.254 tol=4.79 2024-07-12 16:32:01,048 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=71.5 pTM=0.542 ipTM=0.247 tol=6.43 2024-07-12 16:32:08,799 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=72.5 pTM=0.557 ipTM=0.271 tol=4.99 2024-07-12 16:32:16,553 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=72 pTM=0.55 ipTM=0.263 tol=1.76 2024-07-12 16:32:24,317 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=72.1 pTM=0.557 ipTM=0.276 tol=2.18 2024-07-12 16:32:32,071 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=72.6 pTM=0.548 ipTM=0.254 tol=2.68 2024-07-12 16:32:39,836 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=73.2 pTM=0.568 ipTM=0.289 tol=2.96 2024-07-12 16:32:47,582 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=71.9 pTM=0.556 ipTM=0.269 tol=4.11 2024-07-12 16:32:55,337 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=72.6 pTM=0.546 ipTM=0.242 tol=4.39 2024-07-12 16:33:03,096 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=72.6 pTM=0.554 ipTM=0.268 tol=1.84 2024-07-12 16:33:10,855 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=72.2 pTM=0.555 ipTM=0.274 tol=5.93 2024-07-12 16:33:18,619 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=73.7 pTM=0.563 ipTM=0.278 tol=6.55 2024-07-12 16:33:26,386 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=72.9 pTM=0.543 ipTM=0.218 tol=5.04 2024-07-12 16:33:34,140 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=71.8 pTM=0.538 ipTM=0.236 tol=6.1 2024-07-12 16:33:41,903 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=72.4 pTM=0.54 ipTM=0.236 tol=4.25 2024-07-12 16:33:49,660 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=72.2 pTM=0.544 ipTM=0.251 tol=2.56 2024-07-12 16:33:57,434 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=73.6 pTM=0.567 ipTM=0.297 tol=4.86 2024-07-12 16:34:05,188 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=72.5 pTM=0.553 ipTM=0.259 tol=8.23 2024-07-12 16:34:05,188 alphafold2_multimer_v3_model_2_seed_000 took 240.4s (30 recycles) 2024-07-12 16:34:13,195 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=67.2 pTM=0.514 ipTM=0.182 2024-07-12 16:34:20,960 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=67.2 pTM=0.562 ipTM=0.373 tol=18.1 2024-07-12 16:34:28,703 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=69.2 pTM=0.536 ipTM=0.257 tol=4.61 2024-07-12 16:34:36,454 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66.8 pTM=0.519 ipTM=0.251 tol=5.18 2024-07-12 16:34:44,203 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=69.1 pTM=0.527 ipTM=0.246 tol=3.66 2024-07-12 16:34:51,958 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=68.4 pTM=0.518 ipTM=0.253 tol=2.71 2024-07-12 16:34:59,708 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=68 pTM=0.513 ipTM=0.245 tol=3.78 2024-07-12 16:35:07,456 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=68.2 pTM=0.528 ipTM=0.281 tol=4.36 2024-07-12 16:35:15,198 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=68.6 pTM=0.524 ipTM=0.258 tol=2.35 2024-07-12 16:35:22,949 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=68.1 pTM=0.52 ipTM=0.246 tol=1.77 2024-07-12 16:35:30,690 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=68.1 pTM=0.524 ipTM=0.269 tol=1.66 2024-07-12 16:35:38,444 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=66.8 pTM=0.515 ipTM=0.255 tol=1.16 2024-07-12 16:35:46,194 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=68.3 pTM=0.522 ipTM=0.249 tol=2.25 2024-07-12 16:35:53,944 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=68.2 pTM=0.532 ipTM=0.29 tol=1.38 2024-07-12 16:36:01,691 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=67.8 pTM=0.514 ipTM=0.254 tol=1.75 2024-07-12 16:36:09,445 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67.1 pTM=0.521 ipTM=0.284 tol=2.09 2024-07-12 16:36:17,188 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=68 pTM=0.518 ipTM=0.264 tol=2.13 2024-07-12 16:36:24,939 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=68.8 pTM=0.54 ipTM=0.32 tol=2 2024-07-12 16:36:32,684 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=68.4 pTM=0.524 ipTM=0.268 tol=1.84 2024-07-12 16:36:40,428 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67.8 pTM=0.526 ipTM=0.265 tol=1.53 2024-07-12 16:36:48,171 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=67.2 pTM=0.51 ipTM=0.244 tol=1 2024-07-12 16:36:55,914 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.1 pTM=0.521 ipTM=0.265 tol=1.17 2024-07-12 16:37:03,655 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67 pTM=0.504 ipTM=0.239 tol=3.18 2024-07-12 16:37:11,392 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=66.8 pTM=0.517 ipTM=0.273 tol=2.06 2024-07-12 16:37:19,135 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=68.3 pTM=0.522 ipTM=0.263 tol=2.01 2024-07-12 16:37:26,887 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=69.7 pTM=0.553 ipTM=0.309 tol=2.26 2024-07-12 16:37:34,623 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67.8 pTM=0.513 ipTM=0.257 tol=1.22 2024-07-12 16:37:42,370 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.8 pTM=0.519 ipTM=0.257 tol=1.61 2024-07-12 16:37:50,114 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.8 pTM=0.51 ipTM=0.248 tol=2.1 2024-07-12 16:37:57,867 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=68.2 pTM=0.522 ipTM=0.251 tol=1.66 2024-07-12 16:38:05,612 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.7 pTM=0.507 ipTM=0.257 tol=2.42 2024-07-12 16:38:05,613 alphafold2_multimer_v3_model_3_seed_000 took 240.2s (30 recycles) 2024-07-12 16:38:13,610 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=67.4 pTM=0.525 ipTM=0.196 2024-07-12 16:38:21,368 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=66.8 pTM=0.49 ipTM=0.142 tol=18.4 2024-07-12 16:38:29,122 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.6 pTM=0.502 ipTM=0.214 tol=5.12 2024-07-12 16:38:36,881 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=65.6 pTM=0.498 ipTM=0.215 tol=7.86 2024-07-12 16:38:44,640 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=66.5 pTM=0.504 ipTM=0.226 tol=5.18 2024-07-12 16:38:52,398 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=66 pTM=0.49 ipTM=0.229 tol=3.96 2024-07-12 16:39:00,148 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=68.1 pTM=0.509 ipTM=0.229 tol=4.51 2024-07-12 16:39:07,896 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=67.2 pTM=0.5 ipTM=0.204 tol=3.93 2024-07-12 16:39:15,650 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=67.5 pTM=0.505 ipTM=0.217 tol=5.3 2024-07-12 16:39:23,413 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=67 pTM=0.498 ipTM=0.206 tol=2.77 2024-07-12 16:39:31,171 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=67.5 pTM=0.505 ipTM=0.217 tol=3.81 2024-07-12 16:39:38,938 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=66.8 pTM=0.498 ipTM=0.199 tol=1.9 2024-07-12 16:39:46,697 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=68.4 pTM=0.514 ipTM=0.213 tol=2.43 2024-07-12 16:39:54,462 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=66.8 pTM=0.499 ipTM=0.2 tol=4.03 2024-07-12 16:40:02,223 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=67.6 pTM=0.506 ipTM=0.224 tol=5.48 2024-07-12 16:40:10,002 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=71 pTM=0.53 ipTM=0.202 tol=3.95 2024-07-12 16:40:17,763 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.2 pTM=0.526 ipTM=0.216 tol=3.93 2024-07-12 16:40:25,532 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=70.4 pTM=0.527 ipTM=0.228 tol=2.27 2024-07-12 16:40:33,300 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=71 pTM=0.528 ipTM=0.206 tol=3.8 2024-07-12 16:40:41,077 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=72.2 pTM=0.555 ipTM=0.261 tol=4.28 2024-07-12 16:40:48,830 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=71.1 pTM=0.539 ipTM=0.258 tol=5.87 2024-07-12 16:40:56,587 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=72.4 pTM=0.55 ipTM=0.302 tol=2.43 2024-07-12 16:41:04,350 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=72.1 pTM=0.55 ipTM=0.266 tol=2.78 2024-07-12 16:41:12,113 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=71.2 pTM=0.53 ipTM=0.23 tol=4.23 2024-07-12 16:41:19,879 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=73 pTM=0.564 ipTM=0.33 tol=2.86 2024-07-12 16:41:27,648 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=72.4 pTM=0.542 ipTM=0.241 tol=3.13 2024-07-12 16:41:35,411 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=72.1 pTM=0.556 ipTM=0.289 tol=4.48 2024-07-12 16:41:43,169 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=71.8 pTM=0.535 ipTM=0.243 tol=4.66 2024-07-12 16:41:50,944 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=73.6 pTM=0.578 ipTM=0.339 tol=4.92 2024-07-12 16:41:58,709 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=72.5 pTM=0.56 ipTM=0.288 tol=4.28 2024-07-12 16:42:06,469 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=72 pTM=0.557 ipTM=0.329 tol=3.24 2024-07-12 16:42:06,469 alphafold2_multimer_v3_model_4_seed_000 took 240.6s (30 recycles) 2024-07-12 16:42:14,488 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=66.3 pTM=0.503 ipTM=0.207 2024-07-12 16:42:22,262 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=67.1 pTM=0.513 ipTM=0.227 tol=5.04 2024-07-12 16:42:30,014 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=67.4 pTM=0.508 ipTM=0.261 tol=7.18 2024-07-12 16:42:37,778 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=68.6 pTM=0.517 ipTM=0.269 tol=2.07 2024-07-12 16:42:45,538 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67.8 pTM=0.503 ipTM=0.235 tol=2.99 2024-07-12 16:42:53,302 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=68.3 pTM=0.513 ipTM=0.241 tol=5.1 2024-07-12 16:43:01,051 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=68.9 pTM=0.53 ipTM=0.298 tol=3.12 2024-07-12 16:43:08,825 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=69.3 pTM=0.523 ipTM=0.237 tol=1.73 2024-07-12 16:43:16,584 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=70.3 pTM=0.539 ipTM=0.292 tol=2.37 2024-07-12 16:43:24,350 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=70.6 pTM=0.534 ipTM=0.266 tol=2.35 2024-07-12 16:43:32,113 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=71.6 pTM=0.538 ipTM=0.275 tol=3.68 2024-07-12 16:43:39,876 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=72 pTM=0.558 ipTM=0.333 tol=3.03 2024-07-12 16:43:47,632 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=71.9 pTM=0.542 ipTM=0.285 tol=2.3 2024-07-12 16:43:55,395 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=72.2 pTM=0.563 ipTM=0.38 tol=3.08 2024-07-12 16:44:03,149 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=71.8 pTM=0.542 ipTM=0.286 tol=2.52 2024-07-12 16:44:10,918 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=71.9 pTM=0.551 ipTM=0.292 tol=2.76 2024-07-12 16:44:18,675 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=71.6 pTM=0.536 ipTM=0.263 tol=4.44 2024-07-12 16:44:26,435 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=72.2 pTM=0.558 ipTM=0.363 tol=2.47 2024-07-12 16:44:34,193 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=71.8 pTM=0.539 ipTM=0.273 tol=2.36 2024-07-12 16:44:41,958 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=72.6 pTM=0.56 ipTM=0.336 tol=2.77 2024-07-12 16:44:49,711 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=71.9 pTM=0.539 ipTM=0.267 tol=2.05 2024-07-12 16:44:57,479 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=71.8 pTM=0.551 ipTM=0.291 tol=3.07 2024-07-12 16:45:05,243 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=71.8 pTM=0.535 ipTM=0.247 tol=2.13 2024-07-12 16:45:13,010 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=71.8 pTM=0.552 ipTM=0.299 tol=2.62 2024-07-12 16:45:20,769 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=71.2 pTM=0.534 ipTM=0.251 tol=3.45 2024-07-12 16:45:28,536 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=71.4 pTM=0.547 ipTM=0.287 tol=2.06 2024-07-12 16:45:36,291 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=71.4 pTM=0.533 ipTM=0.253 tol=1.31 2024-07-12 16:45:44,053 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=71.1 pTM=0.54 ipTM=0.285 tol=0.951 2024-07-12 16:45:51,817 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=71.4 pTM=0.532 ipTM=0.251 tol=1.41 2024-07-12 16:45:59,583 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=70.9 pTM=0.539 ipTM=0.308 tol=1.38 2024-07-12 16:46:07,345 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=71.1 pTM=0.526 ipTM=0.249 tol=2.01 2024-07-12 16:46:07,345 alphafold2_multimer_v3_model_5_seed_000 took 240.6s (30 recycles) 2024-07-12 16:46:07,589 reranking models by 'multimer' metric 2024-07-12 16:46:23,953 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-12 16:47:07,590 Relaxation took 60.0s 2024-07-12 16:47:07,590 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=72 pTM=0.557 ipTM=0.329 2024-07-12 16:47:39,108 Relaxation took 31.5s 2024-07-12 16:47:39,108 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=72.1 pTM=0.575 ipTM=0.315 2024-07-12 16:47:55,298 Relaxation took 16.2s 2024-07-12 16:47:55,298 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=72.5 pTM=0.553 ipTM=0.259 2024-07-12 16:48:34,358 Relaxation took 39.1s 2024-07-12 16:48:34,358 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.7 pTM=0.507 ipTM=0.257 2024-07-12 16:49:04,339 Relaxation took 30.0s 2024-07-12 16:49:04,339 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=71.1 pTM=0.526 ipTM=0.249 2024-07-12 16:49:05,673 Done